mRNA_P-wetherbeei_contig51371.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig51371.1.1 vs. uniprot
Match: UPI001C3DE5C8 (O-antigen ligase family protein n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001C3DE5C8) HSP 1 Score: 251 bits (640), Expect = 3.240e-78 Identity = 139/179 (77.65%), Postives = 153/179 (85.47%), Query Frame = 1
Query: 1 ILACIALAWVRRRPRELAALALATLVMTGALAVTFSRSSALMLMVGLVMLAARAIGLRRAAITGAALLVVAGGAAFASSTNVRRAATDSHRLERVSEGRFDLMKGGLTIWRADPVEGAGLGGFQRRFEQTLTPVEQRRVRVVISHNSPITVLSEGGVIGFALFLALIGGAGWAVARGSK 537
ILACIALAWVR R EL ALA A L+MT ALAVTFSRSS LMLMVGLV+LA RA+G RRA +TG +LVVAGGAA A+S NVR AATD RLERVSEGRFDLM+GGLTIWR +PV G GLGGF+ RFE+TLTP EQRRVRVVISHN+P+TVLSE GVIGFALFLAL+ GAGWAV RGS+
Sbjct: 270 ILACIALAWVRSRRGELVALAAAVLIMTAALAVTFSRSSTLMLMVGLVLLAVRAVGPRRAILTGLLVLVVAGGAALATSDNVRSAATDYDRLERVSEGRFDLMRGGLTIWREEPVIGTGLGGFETRFEETLTPTEQRRVRVVISHNTPVTVLSEQGVIGFALFLALLVGAGWAVVRGSR 448
BLAST of mRNA_P-wetherbeei_contig51371.1.1 vs. uniprot
Match: UPI001C3D5DAF (O-antigen ligase family protein n=1 Tax=Miltoncostaea marina TaxID=2843215 RepID=UPI001C3D5DAF) HSP 1 Score: 219 bits (558), Expect = 5.080e-66 Identity = 123/179 (68.72%), Postives = 143/179 (79.89%), Query Frame = 1
Query: 1 ILACIALAWVRRRPRELAALALATLVMTGALAVTFSRSSALMLMVGLVMLAARAIGLRRAAITGAALLVVAGGAAFASSTNVRRAATDSHRLERVSEGRFDLMKGGLTIWRADPVEGAGLGGFQRRFEQTLTPVEQRRVRVVISHNSPITVLSEGGVIGFALFLALIGGAGWAVARGSK 537
I+ C+ALAWVRR E+AAL A LVMT L+VTFSRSS LMLM+ +V+L RA+G RRA G A+L+V G A A S NVR AATD RLERVSEGRFDL+ GGL+IWR +PV GAGLGGF+ RFE+TLTPVEQRRVRVVISHN+P+TVLSEGGV+GFALFL L+ AG A ARGS+
Sbjct: 271 IVVCLALAWVRRGRGEVAALVGAILVMTAGLSVTFSRSSTLMLMLAIVLLGVRAVGARRALGAGLAVLLVGGAGAIALSGNVRHAATDLDRLERVSEGRFDLIGGGLSIWRDEPVAGAGLGGFETRFEETLTPVEQRRVRVVISHNTPVTVLSEGGVVGFALFLGLLVAAGRATARGSR 449
BLAST of mRNA_P-wetherbeei_contig51371.1.1 vs. uniprot
Match: A0A7V9KE94_9ACTN (O-antigen ligase family protein n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A7V9KE94_9ACTN) HSP 1 Score: 88.6 bits (218), Expect = 2.840e-17 Identity = 68/167 (40.72%), Postives = 96/167 (57.49%), Query Frame = 1
Query: 31 RRRPRELAALALATLVMTGALAVTFSRSSALMLMVGLVMLAA-------RAIGLRRAAITGAALLVVAGGAAFASSTNVRRAATDSHRLERVSEGRFDLMKGGLTIWRADPVEGAGLGGFQRRFEQTLTPVEQRRVRVVISHNSPITVLSEGGVIGFALFLALIGGA 510
+RRP LAAL LA V+ L +T S+SS L+ GLV+LAA RA+G+ I AA+LV+A F S+ VR + S +++ + GRFDLM+GG+ + PV+G G F R + + +R + SH PITV +E GVIG A++LAL+G A
Sbjct: 269 KRRPVVLAALMLA--VLWAGLLLTLSQSSFAALLAGLVVLAALRWGAPWRALGIAGVVIAAAAVLVLA----FPSA--VRLDLSSSESIDKATSGRFDLMRGGVELALERPVQGFGSASFSREYRRRENTSSERAISA--SHTIPITVAAEQGVIGLAVYLALLGSA 425
BLAST of mRNA_P-wetherbeei_contig51371.1.1 vs. uniprot
Match: A0A538K476_9ACTN (O-antigen ligase family protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538K476_9ACTN) HSP 1 Score: 77.8 bits (190), Expect = 1.560e-13 Identity = 60/169 (35.50%), Postives = 87/169 (51.48%), Query Frame = 1
Query: 31 RRRPRELAALALATLVMTGALAVTFSRSSALMLMVGLVMLAARAIGLRRAAITGAALLVVAGGAAFASSTNVRRAATDSHRLERVSEGRFDLMKGGLTIWRADPVEGAGLGGFQRRFEQTLTPVEQRRVRVVISHNSPITVLSEGGVIGFALFLALIGGAGWAVARGSK 537
R R R+ A + V+ G L VTFS+SS L+ GL +LAA R+ A+ AL VVA + V S +R + GR DL+ GGL ++ PV G G F R + + +R V SH P+TV +E G++G A++LAL+ A +ARG++
Sbjct: 271 RARTRDAVAGGVVLAVLWGGLLVTFSQSSFAALLAGLGVLAALRWSARQTALVAGALAVVAVAFVIVAPGAVHLDLGSSASADRATSGRVDLIAGGLRLFGDAPVLGHGSASFAREYRRHEDASSRRAVSA--SHTIPVTVAAEQGIVGLAVYLALLIAAFVRLARGAR 437
BLAST of mRNA_P-wetherbeei_contig51371.1.1 vs. uniprot
Match: A0A5B8U1P9_9ACTN (Uncharacterized protein n=1 Tax=Baekduia soli TaxID=496014 RepID=A0A5B8U1P9_9ACTN) HSP 1 Score: 77.4 bits (189), Expect = 2.240e-13 Identity = 57/168 (33.93%), Postives = 89/168 (52.98%), Query Frame = 1
Query: 34 RRPRELAALALATLVMTGALAVTFSRSSALMLMVGLVMLAARAIGLRRAAITGAALLVVAGGAAFASSTNVRRAATDSHRLERVSEGRFDLMKGGLTIWRADPVEGAGLGGFQRRFEQTLTPVEQRRVRVVISHNSPITVLSEGGVIGFALFLALIGGAGWAVARGSK 537
RR R++ A V+ L +T S+SS L++GLV+LA R A T A LVV A+ + + +S + + GR+DL+KGGL ++ A P++G G G F R + + ++R V SH PITV +E G+ G ++LAL+ A + RG++
Sbjct: 270 RRGRDVWGAAAVLAVLWAGLLLTLSQSSFAALLLGLVVLAGARWRPRWAVATAVAALVVGAVFVVAAPSALHLNLNNSKSADTATSGRYDLVKGGLRLFIARPLQGHGSGSFSRSYRRAEKGSQERAVSA--SHTIPITVAAEQGIGGLLVYLALLAAAAVMLLRGAR 435
BLAST of mRNA_P-wetherbeei_contig51371.1.1 vs. uniprot
Match: A0A538FT75_9ACTN (O-antigen ligase family protein n=3 Tax=Actinobacteria TaxID=201174 RepID=A0A538FT75_9ACTN) HSP 1 Score: 74.3 bits (181), Expect = 2.660e-12 Identity = 50/134 (37.31%), Postives = 78/134 (58.21%), Query Frame = 1
Query: 100 TFSRSSALMLMVGLVMLAARAIGLRRAAITGAALLVVAGGAAFASSTNVRRAATDSHRLERVSEGRFDLMKGGLTIWRADPVEGAGLGGFQRRFEQTLTPVEQRRVRVVISHNSPITVLSEGGVIGFALFLALI 501
+FS+SS + L+VG+ ++A A G + A+ G LVV A + +VR H L S GRF L+K GL I PV+G G+GGF++ + T T ++ + + SH++P+TV +E G++G ALF L+
Sbjct: 284 SFSQSSFVALVVGVGIVAWSAWGRKTLALLGVIALVVL--VAALAMPSVRH-----HSLNSASGGRFKLVKNGLAIAAHHPVQGVGIGGFKKAYA-TRTGLKGKEPKAAASHDTPVTVAAETGIVGLALFAWLL 409
BLAST of mRNA_P-wetherbeei_contig51371.1.1 vs. uniprot
Match: A0A538GDT2_9ACTN (O-antigen ligase family protein n=3 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538GDT2_9ACTN) HSP 1 Score: 72.8 bits (177), Expect = 9.640e-12 Identity = 50/135 (37.04%), Postives = 82/135 (60.74%), Query Frame = 1
Query: 91 LAVTFSRSSALMLMVGLVMLAARAIGLRRAAITG--AALLVVAGGAAFASSTNVRRAATDSHRLERVSEGRFDLMKGGLTIWRADPVEGAGLGGFQRRFEQTLTPVEQRRVRVVISHNSPITVLSEGGVIGFALF 489
L ++FS+SS + L+VG+ ++A A G R A+ G AA+++VAG + +VR H L S GRF L+K G+ I PV+G G+GGF++ + T T ++ + + SH++P+T+ +E G++G ALF
Sbjct: 395 LVLSFSQSSFVALVVGVGVVAWFAWGRRTLALLGVIAAVVLVAG----LAMPSVRH-----HSLNSASGGRFKLVKNGVAIAAHHPVQGIGIGGFKQAYA-TRTGLKGKEPKAAASHDTPVTIAAENGIVGLALF 519
BLAST of mRNA_P-wetherbeei_contig51371.1.1 vs. uniprot
Match: A0A538CZA6_9ACTN (FlgD_ig domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538CZA6_9ACTN) HSP 1 Score: 70.1 bits (170), Expect = 8.630e-11 Identity = 48/134 (35.82%), Postives = 75/134 (55.97%), Query Frame = 1
Query: 100 TFSRSSALMLMVGLVMLAARAIGLRRAAITGAALLVVAGGAAFASSTNVRRAATDSHRLERVSEGRFDLMKGGLTIWRADPVEGAGLGGFQRRFEQTLTPVEQRRVRVVISHNSPITVLSEGGVIGFALFLALI 501
+FS+SS + L VG+ ++A A G + A+ G LVV A + +VR H L S GRF L+K GL I PV+G G+GGF++ + T ++ + + SH++P+TV +E G++G LF L+
Sbjct: 560 SFSQSSFVALAVGVGIVAWSAWGRKTLALLGVIALVVL--VAALAMPSVRH-----HSLNSASGGRFKLVKNGLAIAAHHPVQGVGIGGFKKAYAAR-TGLKGKEPKAAASHDTPVTVTAETGIVGLVLFAWLL 685
BLAST of mRNA_P-wetherbeei_contig51371.1.1 vs. uniprot
Match: UPI001EEE8CBE (O-antigen ligase family protein n=1 Tax=Solirubrobacter sp. CPCC 204708 TaxID=2282478 RepID=UPI001EEE8CBE) HSP 1 Score: 67.4 bits (163), Expect = 2.570e-10 Identity = 53/158 (33.54%), Postives = 81/158 (51.27%), Query Frame = 1
Query: 34 RRPRELAALALATLVMTGALAVTFSRSSALMLMVGLVMLAARAIGLRRAAITGAALLVVAGGAA--FASSTNVRRAATDSHRLERVSEGRFDLMKGGLTIWRADPVEGAGLGGFQRRFEQTLTPVEQRRVRVVISHNSPITVLSEGGVIGFALFLALI 501
+RPR L A LV+ G L T S+SS L++GL ++A G + + G AL+ A FA + + DS L+ + GR +LM+GG+ + R P++G G G F + + R SH PITV +E G++G AL++AL+
Sbjct: 12 KRPRNLLLAIGALLVLWGGLLTTLSQSSFAALLLGLAVVAWLRFGAKY--VVGPALVAAVAAAVLVFAFPGALGIDSFDSDTLDDATSGRVELMQGGVDLAREQPLQGWGSGSFNAEYRRAEDA--SGREATSASHTIPITVAAEQGLVGLALYVALL 165
BLAST of mRNA_P-wetherbeei_contig51371.1.1 vs. uniprot
Match: UPI00196AEACE (O-antigen ligase family protein n=1 Tax=Conexibacter sp. SYSU D00693 TaxID=2812560 RepID=UPI00196AEACE) HSP 1 Score: 68.2 bits (165), Expect = 3.580e-10 Identity = 50/156 (32.05%), Postives = 81/156 (51.92%), Query Frame = 1
Query: 34 RRPRELAALALATLVMTGALAVTFSRSSALMLMVGLVMLAARAIGLRRAAITGAALLVVAGGAAFASSTNVRRAATDSHRLERVSEGRFDLMKGGLTIWRADPVEGAGLGGFQRRFEQTLTPVEQRRVRVVISHNSPITVLSEGGVIGFALFLALI 501
RR R+ A A ++ L +T S+SS L+VGL +L RRAA+ ++VV + + +R + L+ + GR +L++GGL ++ P+ G G G F R + + ++ V SH P+TV +E GV+G AL+LAL+
Sbjct: 269 RRARDFALTAALLALLWPGLLLTLSQSSFAALLVGLAVLGGLRWDPRRAAMAAGGVVVVGVLIVLLAGSAIRLDLGSADSLDDATSGRVELVEGGLRLFGDAPLLGHGSGSFSREYRRAEDASGEQAVSA--SHTIPVTVAAEQGVVGLALYLALL 422 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig51371.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig51371.1.1 >prot_P-wetherbeei_contig51371.1.1 ID=prot_P-wetherbeei_contig51371.1.1|Name=mRNA_P-wetherbeei_contig51371.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=179bp ILACIALAWVRRRPRELAALALATLVMTGALAVTFSRSSALMLMVGLVMLback to top mRNA from alignment at P-wetherbeei_contig51371:13..549- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig51371.1.1 ID=mRNA_P-wetherbeei_contig51371.1.1|Name=mRNA_P-wetherbeei_contig51371.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=537bp|location=Sequence derived from alignment at P-wetherbeei_contig51371:13..549- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig51371:13..549- >mRNA_P-wetherbeei_contig51371.1.1 ID=mRNA_P-wetherbeei_contig51371.1.1|Name=mRNA_P-wetherbeei_contig51371.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=537bp|location=Sequence derived from alignment at P-wetherbeei_contig51371:13..549- (Phaeothamnion wetherbeei SAG_119_79)back to top |