mRNA_P-wetherbeei_contig5134.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5134.4.1 vs. uniprot
Match: A0A835ZAK4_9STRA (Cupredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAK4_9STRA) HSP 1 Score: 196 bits (499), Expect = 2.740e-56 Identity = 110/243 (45.27%), Postives = 143/243 (58.85%), Query Frame = 1
Query: 1 LSQPPMRTSANGSLATTLKVEPMLFRVGPFEFHTRAYEGSIPGPTLVLQPGDALSIRLENLLG-DDASSHEAAAENSLRHPNETNLHTHGLHVSPSGNADNVYRVAKPGTTLQYDYVLPADHYRGVFYYHPHHSGSSTLQMLGGMAGAIVVADDWSTTPWEVEAATDVVMHFPSKAFSLKTFSFRALQKDMFYRRRTHQDYALLETRKPGAFPLHFFVANGQFQPILSAAAGEVVRLRVVHAG 726
L QP R SA G L TTL V+ + +GP R+Y+G +PGPTL+++PGD +++ L N LG A +A +N+ H N TN+HTHGLHVSP+G ADN+YR PG TL+Y Y +P G F+YHPH GSS +QML GMAG I+VADD T P E+ A ++V + + + AL K ++ PGA L FF NGQFQP++ GE VRLRVVHAG
Sbjct: 12 LRQPEKRYSAGGVLNTTLTVQSTIVELGPVSLIGRSYDGQVPGPTLIIRPGDTVNLELHNRLGVGPAQGADAFIDNAQGHDNYTNIHTHGLHVSPAGIADNIYRKCAPGETLRYRYSIPPSQPPGTFFYHPHLEGSSAVQMLSGMAGVIIVADDPVTVPAELAAMRELVAVV--QEVDVPRMATIALDK------------RVIRNAAPGA-ALQFFAVNGQFQPLIEVETGEAVRLRVVHAG 239
BLAST of mRNA_P-wetherbeei_contig5134.4.1 vs. uniprot
Match: I2CR85_NANGC (Multicopper oxidase family protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR85_NANGC) HSP 1 Score: 176 bits (445), Expect = 2.230e-49 Identity = 99/245 (40.41%), Postives = 134/245 (54.69%), Query Frame = 1
Query: 1 LSQPPMRTSANGSLATTLKVEPMLFRVGPFEFHTRAYEGSIPGPTLVLQPGDALSIRLENLLGDDASSHEAAAENSLRHPNETNLHTHGLHVSPSGNADNVYRVAKPGTTLQYDYVLPADHYRGVFYYHPHHSGSSTLQMLGGMAGAIVVADDWSTTPWEVEAATDVVMHFPSKAFSLKTFSFRALQKDMFYRRRTHQDYALLETRKPGAF---PLHFFVANGQFQPILSAAAGEVVRLRVVHAG 726
L QP +R + +G L TTL+++P GP + TR YEG +PGPTL+L+PG+ L I N L + +L PN T +HTHGLH+ PSG ADN+YR G +Y + DH G FYYHPH+ GSSTLQM GGMAGA+++ D + P A D++ TF D Y ++LL R + P ++F+ NGQ+QP L+ A E VRLR+V+AG
Sbjct: 151 LRQPEIRRAVDGVLDTTLRIQPARITNGPVSYSTRTYEGRVPGPTLLLRPGETLRIHQINGLAPEQLKRSQVVPQTLHWPNTTTIHTHGLHIDPSGIADNIYRTLASGDRALSEYKVRKDHQPGTFYYHPHYHGSSTLQMAGGMAGALIIDDTPPSPP--SSAPRDILCFLQHVNVVAGTFRNYLYAADEVY-------HSLLRPRVTRTYHDAPGNYFIVNGQYQPKLTTAPDEFVRLRLVNAG 386
BLAST of mRNA_P-wetherbeei_contig5134.4.1 vs. uniprot
Match: D7FH26_ECTSI (To be related with Esi0104_0074 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH26_ECTSI) HSP 1 Score: 160 bits (406), Expect = 4.790e-45 Identity = 85/171 (49.71%), Postives = 107/171 (62.57%), Query Frame = 1
Query: 1 LSQPPMRTSANGSLATTLKVEPMLFRVGPFE--FHTRAYEGSIPGPTLVLQPGDALSIRLENLLGDDASSHEAAAENSLRHPNETNLHTHGLHVSPSGNADNVYRVAKPGTTLQYDYVLPADHYRGVFYYHPHHSGSSTLQMLGGMAGAIVVADDWSTTPWEVEAATDVVM 507
L P R S +G L TTL++ P + + GP + RAYEGS+PGPTL ++PGD L ++E PN TNLH HGLHVSPSG +DN+YR A PG +L+Y Y LP DHY G FYYHPH GSS++Q LGGM+GA+VV D T P ++EA +VVM
Sbjct: 97 LKSPENRFSKDGELRTTLRIAPTVAKAGPLAPPLNVRAYEGSVPGPTLRVKPGDRLVGKVEAW------------------PNVTNLHVHGLHVSPSGVSDNIYRRANPGDSLEYVYDLPPDHYPGTFYYHPHFEGSSSMQTLGGMSGALVVEDPEGTLPPDIEAMREVVM 249
BLAST of mRNA_P-wetherbeei_contig5134.4.1 vs. uniprot
Match: A0A8K1CHK1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHK1_PYTOL) HSP 1 Score: 165 bits (417), Expect = 2.060e-43 Identity = 108/277 (38.99%), Postives = 142/277 (51.26%), Query Frame = 1
Query: 16 MRTSANGSLATTLKVEPMLFRVGPFEFHTRAYEGSIPGPTLVLQPGDALSIRLENLLGDDASSHEAAAENSLRHPNETNLHTHGLHVSPSGNADNVYRVAKPGTTLQYDYVLPADHYRGVFYYHPHHSGSSTLQMLGGMAGAIVVADDWSTTPWEVEAATDVVMHFPSKAFS---------LKTFSFRALQKDMFYRRRTHQDYALLETRKPGAFP-LH-----------------------FFVANGQFQPILSAAAGEVVRLRVVHAGASASLSL 747
+R S G L TT+ V F+ GP F TR+YEGSIPGP L +QPGD L++ L N L + A N+ HPN TNLH HG+HV P+G ADNV RV +PG +L +PA+H RG+F+YHPH+ GS LQM GGM G ++V DD T P + A V+ F S L ++ Y TH +A+L+T FP +H FFV NG + P + E VRLR ++AG S++L L
Sbjct: 137 VRRSVRGELNTTIHVREHQFQFGPISFWTRSYEGSIPGPMLSIQPGDTLNLHLVNELEQNVPGEWAP--NTYHHPNTTNLHVHGMHVDPTGIADNVLRVVEPGKSLFTQIHVPANHPRGLFHYHPHYHGSVFLQMSGGMMGPLLVEDDAETLPKDYRAMKTHVLALQEFRFDGGIAADLRKAAEASRSKLDMNLAY---TH--HAVLDTHVRTLFPHVHRPSEAIEEIPMATSLAERPALSRFFVVNGAYLPRIDVQPNENVRLRFLNAGGSSTLQL 406
BLAST of mRNA_P-wetherbeei_contig5134.4.1 vs. uniprot
Match: A0A1W0A522_9STRA (Plastocyanin-like domain-containing protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A522_9STRA) HSP 1 Score: 155 bits (392), Expect = 4.860e-42 Identity = 101/264 (38.26%), Postives = 131/264 (49.62%), Query Frame = 1
Query: 1 LSQPPMRTSANGSLATTLKVEPMLFRVGPFEFHTRAYEGSIPGPTLVLQPGDALSIRLENLLGDDASSHEAAAENSLRHPNETNLHTHGLHVSPSGNADNVYRVAKPGTTLQYDYVLPADHYRGVFYYHPHHSGSSTLQMLGGMAGAIVVADDWSTTPWEVEAATDVVMHFPSKAFS---------LKTFSFRALQKDMFYRRRTHQDYALLETRKPGAFPLH------FFVANGQFQPILSAAAGEVVRLRVVHAGASASLSL 747
L QPP SA+G L TL+ + F GP F+TR Y G PGPTL ++PGD L I L N L D S E + N++R PN TNLH HG+HVSP G +DNV R K G ++ +P H G F+YHPHH GS+ LQM GGM G I V D+ D ++ S FS T + L D+ R H+ A L F FF+ NGQ+QP + GE ++++AG + L L
Sbjct: 65 LQQPPAHKSADGILDITLRAQVARFTQGPVAFNTRTYNGMFPGPTLCVKPGDTLKITLVNDLLPDLPS-EHLSMNTMRDPNTTNLHVHGMHVSPMGISDNVLRTVKSGESMVLTIKIPETHQLGAFHYHPHHHGSTFLQMGGGMVGIISVQDNIDQV--------DSLLVLQSFTFSGPMLGNHINASTLARSTLPLDLKLTHRNHKRMAELYPEYQPQFDATADNHPPFFIINGQYQPRIQLRNGERKLFQLINAGPTQMLEL 319
BLAST of mRNA_P-wetherbeei_contig5134.4.1 vs. uniprot
Match: A0A067BPB2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BPB2_SAPPC) HSP 1 Score: 157 bits (396), Expect = 6.340e-41 Identity = 104/258 (40.31%), Postives = 133/258 (51.55%), Query Frame = 1
Query: 1 LSQPPMRTSANGSLATTLKVEPMLFRVGPFEFHTRAYEGSIPGPTLVLQPGDALSIRLENLLGDDASSHEAAAENSLRHPNETNLHTHGLHVSPSGNADNVYRVAKPGTTLQYDYVLPADHYRGVFYYHPHHSGSSTLQMLGGMAGAIVVADDWSTTPWEVEAATDVVMHFPSKAF--------------SLKTFSFRALQKDMFYRRRTHQ--DYALLETRKPGAFPLHFFVANGQFQPILSAAAGEVVRLRVVHAG 726
L PP+ S NG L TL V+ F GP F+TR+Y G PGPTL +PGD L I L N L DA S E N+LR PN TN+H HG+HVSPSG ADNV R KPG +++ +P DH GV++YHPHH GS LQM GGM GAI + D D V+ + F S T A +M ++R + DY + A+P F+ NGQ+ P L+ GE R+++AG
Sbjct: 64 LPSPPVYKSHNGVLEITLTVQTARFTNGPVAFNTRSYNGMFPGPTLCAKPGDTLRITLINQLEMDAPS-EGLHMNTLRDPNTTNIHFHGMHVSPSGVADNVMRALKPGESMEVIVKIPDDHPLGVYHYHPHHHGSVFLQMGGGMVGAISIQDSVDDV--------DNVLVLQAYGFKGGMLGNLIGAANVSKSTLPIDAQLTNMSHKRVSDAFPDYQPRFSAPATAYP-SFYTVNGQYHPRLTLHDGERKLFRLINAG 311
BLAST of mRNA_P-wetherbeei_contig5134.4.1 vs. uniprot
Match: A0A219JD88_PHYCP (Laccase n=1 Tax=Phytophthora capsici TaxID=4784 RepID=A0A219JD88_PHYCP) HSP 1 Score: 154 bits (389), Expect = 1.380e-40 Identity = 80/157 (50.96%), Postives = 98/157 (62.42%), Query Frame = 1
Query: 19 RTSANGSLATTLKVEPMLFRVGPFEFHTRAYEGSIPGPTLVLQPGDALSIRLENLLGDDASSHEAAAENSLRHPNETNLHTHGLHVSPSGNADNVYRVAKPGTTLQYDYVLPADHYRGVFYYHPHHSGSSTLQMLGGMAGAIVVADDWSTTPWEVEA 489
R S NG L T++ V L GP F+TRAYEGS+PGP LVL+PGD LSI L N LG + + N++ PN TNLH HG+HV P+G DNV+R+ PG + +P +H RG+F+YHPH GS LQM GGM G IVV DD T P E A
Sbjct: 130 RVSVNGRLDTSITVAEKLVDNGPIAFYTRAYEGSVPGPMLVLKPGDLLSIHLTNNLGPNVAGEWTP--NTMHEPNNTNLHFHGMHVDPTGTEDNVFRIVAPGESADTHLHVPLNHPRGLFHYHPHFHGSVFLQMGGGMVGPIVVEDDPETVPAEYAA 284
BLAST of mRNA_P-wetherbeei_contig5134.4.1 vs. uniprot
Match: T0RRM9_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0RRM9_SAPDV) HSP 1 Score: 155 bits (393), Expect = 1.580e-40 Identity = 105/265 (39.62%), Postives = 137/265 (51.70%), Query Frame = 1
Query: 1 LSQPPMRTSANGSLATTLKVEPMLFRVGPFEFHTRAYEGSIPGPTLVLQPGDALSIRLENLLGDDASSHEAAAENSLRHPNETNLHTHGLHVSPSGNADNVYRVAKPGTTLQYDYVLPADHYRGVFYYHPHHSGSSTLQMLGGMAGAIVVADDWSTTPWEVEAATDVVMHFPSKAF---------SLKTFSFRALQKDMFYRRRTHQ-------DYALLETRKPGAFPLHFFVANGQFQPILSAAAGEVVRLRVVHAGASASLSL 747
L QP S NG L TL VE F+ GP F++R+Y G PGPTL +PGD L I L N L D S E N+ R PN TNLH HG+HVSPSG ADNV R K G +++ +P +H GVF+YHPHH GS+ LQM GGM GAI V E D ++ + AF + S + D R+ + DY + PG +P F+V NGQ+QP ++ + GE +V++AG + L L
Sbjct: 59 LQQPLAYKSHNGVLEVTLSVEATRFKDGPIAFNSRSYNGMFPGPTLCAKPGDLLRITLINQLEPDLPS-EHLHMNTFRDPNTTNLHFHGMHVSPSGIADNVLRTVKSGESMELVVKIPENHPLGVFHYHPHHHGSTFLQMGGGMVGAISVQ--------ETVDQVDTLLILQAFAFRGGMLANLVNATQISRSTMPLDATLTARSPERMAAVFPDYQPHVSGVPGDYP-SFYVVNGQYQPRMTLSDGERKLFQVMNAGPTQILEL 313
BLAST of mRNA_P-wetherbeei_contig5134.4.1 vs. uniprot
Match: A0A7W0TV76_9CHLR (Multicopper oxidase domain-containing protein (Fragment) n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0TV76_9CHLR) HSP 1 Score: 154 bits (390), Expect = 3.270e-40 Identity = 98/249 (39.36%), Postives = 133/249 (53.41%), Query Frame = 1
Query: 1 LSQPPMRTSANGSLATTLKVEPMLFRVGPFEFHTRAYEGSIPGPTLVLQPGDALSIRLENLLGDDASSHEAAAENSLRHPNETNLHTHGLHVSPSGNADNVYRVAKPGTTLQYDYVLPADHYRGVFYYHPHHSGSSTLQMLGGMAGAIVVADDWSTTPWEVEAATDVVMHFPSKAFSLKTFSFRALQKDMFYRRRTHQDYALLETRKPGAFPLHFFVANGQFQPILSAAAGEVVRLRVVHAGASASLSL 747
L++P +R + G L T L++ + +G + H R Y+G IPGPTL +PGD L I L N L +A + H N TNLH HGLHVSP+G ADNV+R +PG + +P DH G F+YHPHH GS+ +Q+ GMAGA+VV D++ P E+ AA + V+ L + +F + Y ET P A P F NGQ QPIL GEV R R++ A ++L L
Sbjct: 86 LTEPAVRRAVAGVLRTDLRLAYLYHDIGGYRLHLRGYDGGIPGPTLRARPGDVLRIGLGNDLPPNADPLPLNGD-LPHHFNTTNLHVHGLHVSPAGIADNVFRSMEPGQRYDIEIPIPVDHPSGTFWYHPHHHGSADIQLTSGMAGALVVEGDFAEVP-EIAAARERVL---------------ILSEVLFDHLGAIEHY---ETVWPEAVP-RFLAVNGQRQPILRMRPGEVQRWRLIQAAHESNLRL 313
BLAST of mRNA_P-wetherbeei_contig5134.4.1 vs. uniprot
Match: A0A5D6YCR1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YCR1_9STRA) HSP 1 Score: 155 bits (393), Expect = 1.380e-39 Identity = 82/153 (53.59%), Postives = 100/153 (65.36%), Query Frame = 1
Query: 1 LSQPPMRTSANGSLATTLKVEPMLFRVGPFEFHTRAYEGSIPGPTLVLQPGDALSIRLENLLGDDASSHEAAAENSLRHPNETNLHTHGLHVSPSGNADNVYRVAKPGTTLQYDYVLPADHYRGVFYYHPHHSGSSTLQMLGGMAGAIVVADD 459
L QP R S NG L TTL+V P F GP F TR+YEGS+PGPTL ++PGD L+I L N LG + + A +N+L PN TNLH HG+HV P+G ADNV RV PG + +P DH RG+F+YHPH G+ QM GGMAGA+VV D
Sbjct: 1164 LRQPEERVSVNGVLNTTLRVRPAHFTDGPISFWTRSYEGSVPGPTLRVKPGDTLTIELVNELGPNTPGNWA--KNTLHSPNTTNLHVHGMHVDPTGVADNVARVVGPGARARTQIHVPRDHPRGLFHYHPHFHGAVFAQMGGGMAGALVVDPD 1314 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5134.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5134.4.1 >prot_P-wetherbeei_contig5134.4.1 ID=prot_P-wetherbeei_contig5134.4.1|Name=mRNA_P-wetherbeei_contig5134.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=244bp MRTSANGSLATTLKVEPMLFRVGPFEFHTRAYEGSIPGPTLVLQPGDALSback to top mRNA from alignment at P-wetherbeei_contig5134:2520..3631+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5134.4.1 ID=mRNA_P-wetherbeei_contig5134.4.1|Name=mRNA_P-wetherbeei_contig5134.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1112bp|location=Sequence derived from alignment at P-wetherbeei_contig5134:2520..3631+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5134:2520..3631+ >mRNA_P-wetherbeei_contig5134.4.1 ID=mRNA_P-wetherbeei_contig5134.4.1|Name=mRNA_P-wetherbeei_contig5134.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=732bp|location=Sequence derived from alignment at P-wetherbeei_contig5134:2520..3631+ (Phaeothamnion wetherbeei SAG_119_79)back to top |