mRNA_P-wetherbeei_contig51339.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig51339.1.1
Unique NamemRNA_P-wetherbeei_contig51339.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig51339.1.1 vs. uniprot
Match: A0A7W0QQH7_9CHLR (CBS domain-containing protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0QQH7_9CHLR)

HSP 1 Score: 145 bits (367), Expect = 1.000e-42
Identity = 72/99 (72.73%), Postives = 80/99 (80.81%), Query Frame = 1
Query:    1 PLTFALRGGPRDIVVTENGYVLGMLWRTDLLEALRGGHADALVGDLMDSAIPVADIDDSIYDVQRRMNETNRWAVPVTEDGLYRGIFTADRFVHLYRQI 297
            PLTFALRGGPRD+ VT+ G VLGMLWR+ LL+ L GG A   V D+MD ++ VADIDDSIYDVQ +MN  NRWAVPVTE G YRGIFTADRFVHL RQI
Sbjct:   34 PLTFALRGGPRDMAVTDGGRVLGMLWRSQLLDGLAGGVAGRTVADVMDRSVYVADIDDSIYDVQLQMNRMNRWAVPVTEAGRYRGIFTADRFVHLNRQI 132          
BLAST of mRNA_P-wetherbeei_contig51339.1.1 vs. uniprot
Match: A0A7V9VXM1_9CHLR (Zinc metalloprotease n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9VXM1_9CHLR)

HSP 1 Score: 150 bits (379), Expect = 5.180e-42
Identity = 73/99 (73.74%), Postives = 82/99 (82.83%), Query Frame = 1
Query:    1 PLTFALRGGPRDIVVTENGYVLGMLWRTDLLEALRGGHADALVGDLMDSAIPVADIDDSIYDVQRRMNETNRWAVPVTEDGLYRGIFTADRFVHLYRQI 297
            PLTFALRGGPRD+ VTENG V+GMLWR+ LL+ L GG A   V D+MD +  VADI+DSIYDVQ++MN  NRWAVPVTE G YRGIFTADRFVHLYRQI
Sbjct:  261 PLTFALRGGPRDMAVTENGQVVGMLWRSQLLDGLAGGVAGRTVSDVMDRSAYVADINDSIYDVQQQMNRMNRWAVPVTESGKYRGIFTADRFVHLYRQI 359          
BLAST of mRNA_P-wetherbeei_contig51339.1.1 vs. uniprot
Match: A0A7V8X616_9CHLR (Zinc metalloprotease n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V8X616_9CHLR)

HSP 1 Score: 148 bits (373), Expect = 3.550e-41
Identity = 70/99 (70.71%), Postives = 83/99 (83.84%), Query Frame = 1
Query:    1 PLTFALRGGPRDIVVTENGYVLGMLWRTDLLEALRGGHADALVGDLMDSAIPVADIDDSIYDVQRRMNETNRWAVPVTEDGLYRGIFTADRFVHLYRQI 297
            PLTFALRGGPRD+VVT++G V+GMLWR+DLLE L+GG A   V DLMD ++ VAD++DS+ DVQ  MN  NRWAVPVTE G YRGIFTADRFVHL+RQ+
Sbjct:  260 PLTFALRGGPRDLVVTDHGQVVGMLWRSDLLEGLQGGVAGRTVADLMDRSVHVADVNDSVLDVQHMMNHMNRWAVPVTERGEYRGIFTADRFVHLHRQV 358          
BLAST of mRNA_P-wetherbeei_contig51339.1.1 vs. uniprot
Match: A0A7V9AKF6_9CHLR (Zinc metalloprotease n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9AKF6_9CHLR)

HSP 1 Score: 148 bits (373), Expect = 4.010e-41
Identity = 71/99 (71.72%), Postives = 82/99 (82.83%), Query Frame = 1
Query:    1 PLTFALRGGPRDIVVTENGYVLGMLWRTDLLEALRGGHADALVGDLMDSAIPVADIDDSIYDVQRRMNETNRWAVPVTEDGLYRGIFTADRFVHLYRQI 297
            PLTFALRGG RD+VVT+ G V+GMLWR+ LL+ L+GG A   V D MD ++ VADIDDS+YDVQR M+  NRWAVPVTEDG YRGIFTADRFVHL+RQI
Sbjct:  261 PLTFALRGGARDLVVTDRGKVVGMLWRSQLLDGLQGGMAGKTVADAMDRSVYVADIDDSVYDVQRNMSRLNRWAVPVTEDGHYRGIFTADRFVHLHRQI 359          
BLAST of mRNA_P-wetherbeei_contig51339.1.1 vs. uniprot
Match: A0A838GL66_9CHLR (CBS domain-containing protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A838GL66_9CHLR)

HSP 1 Score: 142 bits (359), Expect = 1.230e-40
Identity = 70/99 (70.71%), Postives = 80/99 (80.81%), Query Frame = 1
Query:    1 PLTFALRGGPRDIVVTENGYVLGMLWRTDLLEALRGGHADALVGDLMDSAIPVADIDDSIYDVQRRMNETNRWAVPVTEDGLYRGIFTADRFVHLYRQI 297
            PLTFALRGGPRD+ VT+ G VLGMLWR+ LL+ L GG A   V D+MD ++ VADI+DSIYDVQ +MN  NRWAVPVTE G YRGIFTADRFVHL RQ+
Sbjct:  104 PLTFALRGGPRDMAVTDGGRVLGMLWRSQLLDGLAGGVAGRTVADVMDRSVYVADINDSIYDVQLQMNRMNRWAVPVTEAGRYRGIFTADRFVHLNRQM 202          
BLAST of mRNA_P-wetherbeei_contig51339.1.1 vs. uniprot
Match: A0A7W0S5Z7_9CHLR (Zinc metalloprotease n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0S5Z7_9CHLR)

HSP 1 Score: 146 bits (368), Expect = 2.030e-40
Identity = 66/99 (66.67%), Postives = 82/99 (82.83%), Query Frame = 1
Query:    1 PLTFALRGGPRDIVVTENGYVLGMLWRTDLLEALRGGHADALVGDLMDSAIPVADIDDSIYDVQRRMNETNRWAVPVTEDGLYRGIFTADRFVHLYRQI 297
            PLTFALRGGPRD+VV + G V+GMLWR  LL +L GG A   V D+MD  + +AD+DDS++DVQ+RMN+ +RWAVP+TEDGLYRGIFT DRFVH+Y+QI
Sbjct:  260 PLTFALRGGPRDVVVIDQGRVVGMLWRHQLLHSLNGGAAGRTVADVMDRQVYIADVDDSVFDVQQRMNQLDRWAVPITEDGLYRGIFTGDRFVHVYQQI 358          
BLAST of mRNA_P-wetherbeei_contig51339.1.1 vs. uniprot
Match: A0A7V9HM42_9CHLR (Zinc metalloprotease n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9HM42_9CHLR)

HSP 1 Score: 142 bits (358), Expect = 6.120e-39
Identity = 65/99 (65.66%), Postives = 80/99 (80.81%), Query Frame = 1
Query:    1 PLTFALRGGPRDIVVTENGYVLGMLWRTDLLEALRGGHADALVGDLMDSAIPVADIDDSIYDVQRRMNETNRWAVPVTEDGLYRGIFTADRFVHLYRQI 297
            PLT+ALRGGPRD+VVT+ G V+GMLWR ++L A+RGG A   V D+MD  +  AD+DDS++DVQ++M E  RWAVPV EDG YRGIFTADRF HLYRQ+
Sbjct:  262 PLTYALRGGPRDVVVTDGGRVVGMLWRNNVLSAIRGGSAAQSVADIMDVDVVTADVDDSVFDVQKQMTELKRWAVPVVEDGEYRGIFTADRFGHLYRQV 360          
BLAST of mRNA_P-wetherbeei_contig51339.1.1 vs. uniprot
Match: A0A7W0PQQ1_9CHLR (Zinc metalloprotease n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0PQQ1_9CHLR)

HSP 1 Score: 140 bits (353), Expect = 3.610e-38
Identity = 68/99 (68.69%), Postives = 80/99 (80.81%), Query Frame = 1
Query:    1 PLTFALRGGPRDIVVTENGYVLGMLWRTDLLEALRGGHADALVGDLMDSAIPVADIDDSIYDVQRRMNETNRWAVPVTEDGLYRGIFTADRFVHLYRQI 297
            PLTFALRGGPRD+ VTE G V+GMLWR+ LL+ L GG A   V D+MD ++ +ADI++SIY+VQ +MN  NRWAVPVTE G YRGIFTADRFVHL RQI
Sbjct:  261 PLTFALRGGPRDMAVTERGQVVGMLWRSHLLDGLAGGVAGRTVADVMDRSVYIADINESIYEVQLQMNRMNRWAVPVTEAGRYRGIFTADRFVHLNRQI 359          
BLAST of mRNA_P-wetherbeei_contig51339.1.1 vs. uniprot
Match: A0A7W1DUS7_9CHLR (Zinc metalloprotease n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W1DUS7_9CHLR)

HSP 1 Score: 139 bits (349), Expect = 1.350e-37
Identity = 63/99 (63.64%), Postives = 78/99 (78.79%), Query Frame = 1
Query:    1 PLTFALRGGPRDIVVTENGYVLGMLWRTDLLEALRGGHADALVGDLMDSAIPVADIDDSIYDVQRRMNETNRWAVPVTEDGLYRGIFTADRFVHLYRQI 297
            PLT+ALRGGPRD+ VT+ G V+GMLWR  +L AL+GG A   V D+MD  +  A++D+S+YDVQ+RMN  N WA+PV EDG YRGIFTADRFVH+Y QI
Sbjct:  264 PLTYALRGGPRDVAVTDGGQVVGMLWRHQVLNALQGGGAGVRVADVMDPEVVTANVDESVYDVQQRMNRLNCWAIPVVEDGQYRGIFTADRFVHVYHQI 362          
BLAST of mRNA_P-wetherbeei_contig51339.1.1 vs. uniprot
Match: A0A6J4VTK3_9CHLR (Zinc metalloprotease n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4VTK3_9CHLR)

HSP 1 Score: 131 bits (329), Expect = 1.150e-34
Identity = 61/99 (61.62%), Postives = 74/99 (74.75%), Query Frame = 1
Query:    1 PLTFALRGGPRDIVVTENGYVLGMLWRTDLLEALRGGHADALVGDLMDSAIPVADIDDSIYDVQRRMNETNRWAVPVTEDGLYRGIFTADRFVHLYRQI 297
            PL +ALRGGPRD+ VT+ G V+GMLWR D+L  L GG     V D+MD  +  A +D+S+YDVQ RMN  NRWA+PVTEDG YRGIFTADRFVH+Y  +
Sbjct:  263 PLAYALRGGPRDLAVTDRGRVVGMLWRHDVLHELHGGSR-LTVADVMDPDVVTATVDESVYDVQHRMNRLNRWAIPVTEDGQYRGIFTADRFVHVYHHL 360          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig51339.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7W0QQH7_9CHLR1.000e-4272.73CBS domain-containing protein n=1 Tax=Chloroflexia... [more]
A0A7V9VXM1_9CHLR5.180e-4273.74Zinc metalloprotease n=1 Tax=Chloroflexia bacteriu... [more]
A0A7V8X616_9CHLR3.550e-4170.71Zinc metalloprotease n=1 Tax=Chloroflexia bacteriu... [more]
A0A7V9AKF6_9CHLR4.010e-4171.72Zinc metalloprotease n=1 Tax=Chloroflexia bacteriu... [more]
A0A838GL66_9CHLR1.230e-4070.71CBS domain-containing protein n=1 Tax=Chloroflexia... [more]
A0A7W0S5Z7_9CHLR2.030e-4066.67Zinc metalloprotease n=1 Tax=Chloroflexia bacteriu... [more]
A0A7V9HM42_9CHLR6.120e-3965.66Zinc metalloprotease n=1 Tax=Chloroflexia bacteriu... [more]
A0A7W0PQQ1_9CHLR3.610e-3868.69Zinc metalloprotease n=1 Tax=Chloroflexia bacteriu... [more]
A0A7W1DUS7_9CHLR1.350e-3763.64Zinc metalloprotease n=1 Tax=Chloroflexia bacteriu... [more]
A0A6J4VTK3_9CHLR1.150e-3461.62Zinc metalloprotease n=1 Tax=uncultured Thermomicr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig51339contigP-wetherbeei_contig51339:252..548 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog479434.Sthe_1844
PFAMsCBS,Peptidase_M50
Model size297
Max annot lvl189775|Thermomicrobia
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.53e-27
EggNOG OGsCOG0517@1|root,COG1994@1|root,COG0517@2|Bacteria,COG1994@2|Bacteria,2G719@200795|Chloroflexi,27XT5@189775|Thermomicrobia
DescriptionBelongs to the peptidase M50B family
Cds size297
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186771.0761504-CDS-P-wetherbeei_contig51339:251..5481683186771.0761504-CDS-P-wetherbeei_contig51339:251..548Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig51339 252..548 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig51339.1.1prot_P-wetherbeei_contig51339.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig51339 252..548 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig51339.1.1

>prot_P-wetherbeei_contig51339.1.1 ID=prot_P-wetherbeei_contig51339.1.1|Name=mRNA_P-wetherbeei_contig51339.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=99bp
PLTFALRGGPRDIVVTENGYVLGMLWRTDLLEALRGGHADALVGDLMDSA
IPVADIDDSIYDVQRRMNETNRWAVPVTEDGLYRGIFTADRFVHLYRQI
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mRNA from alignment at P-wetherbeei_contig51339:252..548-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig51339.1.1 ID=mRNA_P-wetherbeei_contig51339.1.1|Name=mRNA_P-wetherbeei_contig51339.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=297bp|location=Sequence derived from alignment at P-wetherbeei_contig51339:252..548- (Phaeothamnion wetherbeei SAG_119_79)
CCGCTCACCTTCGCCCTGCGGGGGGGCCCGCGCGACATCGTCGTGACCGA GAACGGCTACGTGCTCGGCATGCTCTGGCGAACCGACCTGCTGGAGGCGC TGCGTGGGGGCCACGCCGATGCGCTGGTGGGGGACCTCATGGATTCGGCC ATCCCCGTCGCGGATATCGACGATTCGATCTACGACGTGCAACGCCGGAT GAACGAGACCAATCGCTGGGCGGTCCCGGTGACGGAGGACGGCCTCTACC GCGGTATCTTCACGGCCGACCGCTTCGTCCACCTCTACCGCCAGATC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig51339:252..548-

>mRNA_P-wetherbeei_contig51339.1.1 ID=mRNA_P-wetherbeei_contig51339.1.1|Name=mRNA_P-wetherbeei_contig51339.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=297bp|location=Sequence derived from alignment at P-wetherbeei_contig51339:252..548- (Phaeothamnion wetherbeei SAG_119_79)
CCGCTCACCTTCGCCCTGCGGGGGGGCCCGCGCGACATCGTCGTGACCGA
GAACGGCTACGTGCTCGGCATGCTCTGGCGAACCGACCTGCTGGAGGCGC
TGCGTGGGGGCCACGCCGATGCGCTGGTGGGGGACCTCATGGATTCGGCC
ATCCCCGTCGCGGATATCGACGATTCGATCTACGACGTGCAACGCCGGAT
GAACGAGACCAATCGCTGGGCGGTCCCGGTGACGGAGGACGGCCTCTACC
GCGGTATCTTCACGGCCGACCGCTTCGTCCACCTCTACCGCCAGATC
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