mRNA_P-wetherbeei_contig5118.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5118.1.1 vs. uniprot
Match: A0A835YNU2_9STRA (Exocyst complex component Sec6-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNU2_9STRA) HSP 1 Score: 315 bits (806), Expect = 1.010e-97 Identity = 174/315 (55.24%), Postives = 220/315 (69.84%), Query Frame = 1
Query: 91 DVRGEYRRRLAATDSQLSTVVRGRLDGVKRARDLIEDSAAQTADLQAQFAKMEALSRDCRGLFGTYPHIKRLHHARSNLASTARLVEFFFAIPARAQALTDLLREQPRQMKIVYEGAAELEAWRDSFMTALKQYGTRALSSGGSGGRGSVAFEGSGREGGADPRKYQRIVERAGPLLNAVLQLVTELRRQVVTNVAGTVDEQGGWGGGGCLELAMTQPALLVSSLEVAELMRARQRRRYQAAYRAALESGADPDEALGGLESGEELHAEMINGLRKGLDLKIGSQFAQMQMAAVDAGDSKTMATPTAATHLPGDL 1035
+++ EYRR+L A + QLS+VVR RLDGVKRARDLI SAA +L QF KME LSRDCRGLFG Y IK LHHAR NL+ TA LVEF++ IP +A+AL DLL++QP Q+K V E +LE WR SF+ ALK+YG +A++ F+ +GGADP KYQ +VE+ GP L+ V L +R Q+V N+ G VD QG W GGGCLELAMT PA+LV +LEVAEL+ AR +R Y A A G DPD+A+ GLE E + +++GL+ GL+ KI +QF+QMQMA+VDAGDS+ MAT AAT+L DL
Sbjct: 5 EMQTEYRRKLMAMEGQLSSVVRSRLDGVKRARDLISQSAAHIGELHNQFGKMEHLSRDCRGLFGKYERIKSLHHARRNLSVTAHLVEFYYTIPRKARALMDLLQDQPAQLKYVSEETTKLEHWRSSFLDALKEYGDKAMT--------RATFQKG--KGGADPLKYQLVVEKVGPQLSVVKDLSEAVRAQIVLNIGGHVDSQGNWQGGGCLELAMTDPAMLVRTLEVAELISARAKRAYLTAREDAERKGIDPDDAVAGLEPPETMKEAVLSGLKTGLEHKIVAQFSQMQMASVDAGDSQMMATLGAATNLLVDL 309
BLAST of mRNA_P-wetherbeei_contig5118.1.1 vs. uniprot
Match: D7G5L8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5L8_ECTSI) HSP 1 Score: 284 bits (727), Expect = 6.410e-89 Identity = 171/347 (49.28%), Postives = 215/347 (61.96%), Query Frame = 1
Query: 1 LEEAKKKAEQSAKVLVERRFKEPANLEDLRDVRGEYRRRLAATDSQLSTVVRGRLDGVKRARDLIEDSAAQTADLQAQFAKMEALSR--DCRGLFGTYPHIKRLHHARSNLASTARLVEFFFAIPARAQALTDLLREQPRQMKIVYEGAAELEAWRDSFMTALKQYGTRALSSGGSGGRGSVAFEGSGREGGADPRKYQRIVERAGPLLNAVLQLVTELRRQVVTNVAGTVDEQGGWGGGGCLELAMTQPALLVSSLEVAELMRARQRRRYQAAYRAALESGADPDEALGGLESGEELHAEMINGLRKGLDLKIGSQFAQMQMAAVDAGDSKTMATPTAATHLPGDL 1035
LEEA+++AE +A L+ER+FKEPANLED+ ++ ++R++L AT+SQLS+VVR RLDGVKRARDLI+D+A+Q + L QFAKME L R D RGLFG YPH+K+LHHAR+NLA T++L EFF+ IP RA+ L L+EQP Q+K VY + LE WR SFM ALK D+ G W GGGCLELAM PALLV +LEVAELMRAR R+ + A R A E+G DPDEA+ GL+S +EL E+ GL+KGLD ++ +QFA MQMA VDAG+SK AT AAT+L DL
Sbjct: 11 LEEAQQQAEAAAATLIERKFKEPANLEDIAEMCADFRKKLTATESQLSSVVRSRLDGVKRARDLIDDNASQISKLHGQFAKMEELCREEDGRGLFGKYPHLKKLHHARTNLAVTSQLSEFFYTIPQRAEGLIKQLKEQPSQLKEVYLEVSRLEYWRASFMKALK------------------------------------------------------------------TDQYGRWIGGGCLELAMQDPALLVRTLEVAELMRARLRQDWDEAKRVAKETGGDPDEAVAGLQSADELFEEINKGLKKGLDNRVSAQFATMQMAGVDAGESKVFATLGAATNLLVDL 291
BLAST of mRNA_P-wetherbeei_contig5118.1.1 vs. uniprot
Match: W7TFT7_9STRA (Exocyst complex component Sec6 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFT7_9STRA) HSP 1 Score: 131 bits (330), Expect = 4.160e-30 Identity = 100/345 (28.99%), Postives = 178/345 (51.59%), Query Frame = 1
Query: 28 QSAKVLVERRFKEPANLEDLRDVRGEYRRRLAATDSQLSTVVRGRLDGVKRARDLIEDSAAQTADLQAQFAKMEALSRDC----RGLFGTYPHIKRLHHARSNLASTARLVEFFFAIPARAQALTDLLREQPRQMKIVYEGAAELEAWRDSFMTALK-QYGTRAL----SSGGSGGRGSVAFEGSGREGGADPRKYQRIVERAGPLLNAVLQLVTELRRQVVTNVAGTVDEQGGWGGGGCLELAMTQPALLVSSLEVAELMRARQRRRYQAAYRAALESGADPDEALGGLESGEELHAEMINGLRKGLDLKIGSQFAQMQMAAVDAGDSKTMATPTAATHLPGDL 1035
+ A +++++F E L+DL ++R +Y+++L++ + QLS +V+ +LDGVKR+ D+I+ + Q ++ +F M L R + LF YP +K ++ AR NL T + V ++ +PAR L LL +QP Q++ V+ +LE WRD + LK Q G++ + S G GG V G R+ G L V +L+ +R+++ N++ C E+ P +L S+LE+ ++ A Q+++ A A ++ D +EA+ L E+L A++++ L++ +D + FAQ Q A+ S T A A+H+ D+
Sbjct: 51 EKASKIIKKKFCEQVQLDDLPELRNDYKKKLSSLELQLSGMVQVKLDGVKRSMDVIQTANDQMVAVRGEFEGMYELCRKAGEQGKVLFDAYPRLKMINRARKNLERTLKEVTYYANLPARVDHLVGLLEKQPMQLRQVHLEGQQLELWRDELLRELKVQQGSKTMAPPPSKSGIGGPSRVVSVGD------------RMQATFGIHLEEVKKLLDAIRKKIFDNISN------------CFEIVQLDPRILTSTLEIVDMHAAFQKQKATRARERAEKNSEDVEEAVA-LSLLEDLRADLMSKLKQRVDDRASVMFAQTQAEAIAKEASVTTAGD--ASHVQPDV 368
BLAST of mRNA_P-wetherbeei_contig5118.1.1 vs. uniprot
Match: A0A6H5KMB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMB3_9PHAE) HSP 1 Score: 100 bits (248), Expect = 1.710e-19 Identity = 65/157 (41.40%), Postives = 82/157 (52.23%), Query Frame = 1
Query: 565 GGADPRKYQRIVERAGPLLNAVLQLVTELRRQVVTNVAGTVDEQGGWGGGGCLELAMTQPALLVSSLEVAELMRARQRRRYQAAYRAALESGADPDEALGGLESGEELHAEMINGLRKGLDLKIGSQFAQMQMAAVDAGDSKTMATPTAATHLPGDL 1035
GGAD KYQ IVER GP L+ VL L +R ++ NVAG + + A R A E+G DPDEA+ GL+S +EL E+ GL+KGLD ++ +QFA MQMA VDAG+SK AT AAT+L DL
Sbjct: 11 GGADSVKYQMIVERVGPQLSVVLNLSVAIREAIIENVAG---------------------------------------KDWDEAKRVAKETGGDPDEAVAGLQSADELFEEINKGLKKGLDNRVSAQFATMQMAGVDAGESKVFATLGAATNLLVDL 128
BLAST of mRNA_P-wetherbeei_contig5118.1.1 vs. uniprot
Match: A0A7S3HRG9_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HRG9_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 1.560e-14 Identity = 82/326 (25.15%), Postives = 147/326 (45.09%), Query Frame = 1
Query: 28 QSAKVLVERRFKEPANLEDLRDVRGEYRRRLAATDSQLSTVVRGRLDGVKRARDLIEDSAAQTADLQAQFAKMEALSRDCRGLFGTYPHIKRLHHARSNLASTARLVEFFFAIPARAQALTDLLREQPRQMKIVYEGAAELEAWRDSFMTALKQYGTRALSSGGSGGRGSVAFEGSGREGGADPRKYQRIVERAGPLLNAVLQLVTELRRQVVTNVAGTVDEQGGWGGGGCLELAMTQPALLVSSLEVAELMRARQRRRYQAAYRAALESGADPDEALGGLESGE--ELHAEMINGLRKGLDLKIGSQFAQMQMAAVDAGDSKTMA 999
Q A+ + F +P L+ L + + ++L A +SQLS V+ +LD +KRA DL+++S + L ++++ Y H+K++ +AR NL+ VEFF +P R + L + + P +K V+ A +LE+ R + M ++ R +S G ++ Q + + ++N L++V +L +V V G + G +LA P LV S E+ E+ RR A R AL++ + L ++ E +H+ + +R LD K+ F + ++ + DSK A
Sbjct: 20 QKARRTIAENFADPDALDGLGVLSHQLEKQLIAAESQLSNAVQSKLDSLKRAVDLMDESTLKLTKLSTNISRIDEKIAQTNTAISNYDHLKKVDNARENLSKVISQVEFFARVPERVEFLREKMDSSPASLKDVFLEAVKLESLRVALMKEIQVTRNRRISIG-------TCL--------SEDANDQLMGKIRSAVMNH-LRIVPDLMDEVTNRVMGNI--------GRMFDLAADNPQDLVMSFEILEMQHEYNERR-NVAMRNALKN-----KTLNSVQQHEYDNIHSVVETKMRHMLDEKVEGDFELVNLSN-ELEDSKITA 314
BLAST of mRNA_P-wetherbeei_contig5118.1.1 vs. uniprot
Match: A0A482RQQ7_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RQQ7_9ARCH) HSP 1 Score: 79.7 bits (195), Expect = 7.080e-14 Identity = 49/161 (30.43%), Postives = 86/161 (53.42%), Query Frame = 1
Query: 34 AKVLVERRFKEPANLEDLRDVRGEYRRRLAATDSQLSTVVRGRLDGVKRARDLIEDSAAQTADLQAQFAKMEALSRDCRGLFGTYPHIKRLHHARSNLASTARLVEFFFAIPARAQALTDLLREQPRQMKIVYEGAAELEAWRDSFMTALKQYGTRALSSG 516
A++ + +F++P LEDL + + ++LAA + QL+ V+ +LD +KRA DL+++S + + L K++ Y ++KR +AR N+ V+FF ++P + LT L + P +K VY A +LE+ R + + +K R LS G
Sbjct: 9 ARLNIAEKFQDPNALEDLGVMSFQLEKQLAAVEGQLNGAVQSKLDSLKRAVDLMDESVLKLSKLSTNITKIDEKIAVTNTTISNYDYLKRASNARDNMQKVLHQVQFFASVPQLVEKLTAKL-QNPASLKEVYLEAVKLESLRAALLKEMKVSRNRRLSVG 168 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5118.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5118.1.1 >prot_P-wetherbeei_contig5118.1.1 ID=prot_P-wetherbeei_contig5118.1.1|Name=mRNA_P-wetherbeei_contig5118.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=345bp LEEAKKKAEQSAKVLVERRFKEPANLEDLRDVRGEYRRRLAATDSQLSTVback to top mRNA from alignment at P-wetherbeei_contig5118:1..3167- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5118.1.1 ID=mRNA_P-wetherbeei_contig5118.1.1|Name=mRNA_P-wetherbeei_contig5118.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3167bp|location=Sequence derived from alignment at P-wetherbeei_contig5118:1..3167- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5118:1..3167- >mRNA_P-wetherbeei_contig5118.1.1 ID=mRNA_P-wetherbeei_contig5118.1.1|Name=mRNA_P-wetherbeei_contig5118.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1035bp|location=Sequence derived from alignment at P-wetherbeei_contig5118:1..3167- (Phaeothamnion wetherbeei SAG_119_79)back to top |