mRNA_P-wetherbeei_contig51113.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig51113.1.1
Unique NamemRNA_P-wetherbeei_contig51113.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig51113.1.1 vs. uniprot
Match: A0A5C7NKN9_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A5C7NKN9_9PROT)

HSP 1 Score: 216 bits (551), Expect = 1.620e-68
Identity = 103/184 (55.98%), Postives = 130/184 (70.65%), Query Frame = 1
Query:   13 VDNPAVRKVAWFSYLDGGDIRDTCAPGSPDRFRLVYNGQYENQIRSYEITSDGTSNDGAYYIARAMGSP-NLLDWTTNDLLAPWRWQKSEMTLKPAEFTQFRDLLAASGWDQGAPQGKRLHSQDFYWVAAGCRDGQFHYDAWVH-----AQGDFPEIKFQDFLLAHDKTGMAFRQPHKVLPIDR 546
            ++NP VRKV WFSYLDG DIR++CA GS DR RLVYNGQY++Q+RSY+I  D     GA    RAM +  NL++W+T+++  PW W++S++TL  AE  +FR LL  SG+   APQG +LHSQDFYW+AAGC  G FHY AW +     A+  F  IKFQDFLL  DKTG+AFRQPH   P +R
Sbjct:    1 MNNPVVRKVGWFSYLDGNDIRESCAAGSADRTRLVYNGQYDSQLRSYDIFVD--KKGGAVMNVRAMNNDGNLMNWSTDNIFGPWTWKQSQVTLTAAELQEFRGLLTQSGYGGQAPQGLKLHSQDFYWIAAGCEGGVFHYYAWNNRPQSMARQGFAGIKFQDFLLKRDKTGVAFRQPHVTSPAER 182          
BLAST of mRNA_P-wetherbeei_contig51113.1.1 vs. uniprot
Match: UPI000E5C6B7E (hypothetical protein n=1 Tax=Algihabitans albus TaxID=2164067 RepID=UPI000E5C6B7E)

HSP 1 Score: 186 bits (472), Expect = 3.240e-56
Identity = 84/183 (45.90%), Postives = 115/183 (62.84%), Query Frame = 1
Query:    1 HRGNVDNPAVRKVAWFSYLDGGDIRDTCAPGSPDRFRLVYNGQYENQIRSYEITSDGTSNDGAYYIARAMGSPNLLDWTTNDLLAPWRWQKSEMTLKPAEFTQFRDLLAASGWDQGAPQGKRLHSQDFYWVAAGCRDGQFHYDAWVHAQGDFPEIKFQDFLLAHDKTGMAFRQPHKVLPIDRM 549
            + G +D P V+K++WFSYL+G DIR  C PGS   +RLVYNGQYE Q+R YE+  DG  + GA Y AR     +L ++T N+ L PW W+ +E+ L P E   F   L  SG     P+G RLHS++FYW+   CRDG  HY+AW+H    +  I F D+LL  D++G+ FR+P  V P +R+
Sbjct:   28 YSGGIDQPGVQKISWFSYLNGDDIRRACVPGSVPHWRLVYNGQYEQQLRGYELVGDG--HGGATYSARVQTPASLTNFTLNNPLEPWAWKTNELLLSPPEVQGFETALQQSGAYGPTPKGLRLHSRNFYWILIACRDGVVHYNAWLHPSERWDRIVFDDWLLRFDESGVPFREPRFVDPAERL 208          
BLAST of mRNA_P-wetherbeei_contig51113.1.1 vs. uniprot
Match: A0A5J6MUZ0_9PROT (Uncharacterized protein n=2 Tax=Hypericibacter adhaerens TaxID=2602016 RepID=A0A5J6MUZ0_9PROT)

HSP 1 Score: 171 bits (432), Expect = 2.680e-50
Identity = 83/179 (46.37%), Postives = 110/179 (61.45%), Query Frame = 1
Query:    1 HRGNVDNPAVRKVAWFSYLDGGDIRDTCAPG---SPDRFRLVYNGQYENQIRSYEITSDGTSNDGAYYIARAMGS-PNLLDWTTNDLLAPWRWQKSEMTLKPAEFTQFRDLLAASGWDQGAP-QGKRLHSQDFYWVAAGCRDGQFHYDAWVHAQGDFPEIKFQDFLLAHDKTGMAFRQP 522
            + GN D+P  R+V WFS+L G DI+ TC PG   S DR+R VYNG+Y  Q+R+YE+  DG    GAY  ARA G   NL +    D L P RW++S  TL  A F+ F+  LAA G+ Q    +G+R  S  FYW+ +GC +GQFH+ AW +   DF +++F   LL  D+TGMAF  P
Sbjct:   16 YHGNFDDPVQRRVQWFSFLGGDDIKATCQPGASGSTDRYRFVYNGRYAEQVRAYELVGDGGG--GAYLTARATGKYANLAEVNLEDPLGPLRWKESRATLNGATFSLFKQALAADGFLQPPKTEGQRFSSNSFYWLVSGCHEGQFHFGAWKYPSEDFQKLQFPKLLLVRDQTGMAFNPP 192          
BLAST of mRNA_P-wetherbeei_contig51113.1.1 vs. uniprot
Match: A0A4R6WLG3_9PROT (Uncharacterized protein n=2 Tax=Dongia mobilis TaxID=578943 RepID=A0A4R6WLG3_9PROT)

HSP 1 Score: 156 bits (394), Expect = 3.280e-44
Identity = 77/184 (41.85%), Postives = 108/184 (58.70%), Query Frame = 1
Query:   13 VDNPAVRKVAWFSYLDGGDIRDTCAPGSPDRFRLVYNGQYENQIRSYEITSDGTSNDGAYYIARAMG-SPNLLDWTTNDL---LAPWRWQKSEMTLKPAEFTQFRDLLAASGWDQGAPQGKRLHSQDFYWVAAGCRDGQFHYDAWVHAQGDFP--EIKFQDFLLAHDKTGMAFRQPHKVLPIDR 546
            +DNP  RK  W+SYLD  DIR++CA G PD+ RLVYN Q+ + +R+Y++             ARA G S NLL  + + L     PW ++KS+ +L  AE+ +  +LL  SG+      G RLHSQDFYW+ AGC  G+FH++AW       P   I+F DFLL  D TG+ ++ P  V  I++
Sbjct:   49 IDNPVERKFTWYSYLDAADIRNSCASGGPDQLRLVYNAQFYDHVRAYDLLGG----PNPLMTARARGTSGNLLGLSFDSLEGLFGPWNFRKSQTSLTAAEWAELVELLRKSGYASTEQSGMRLHSQDFYWLVAGCEAGKFHFNAWAERSSATPLTRIQFLDFLLKRDATGLPYKPPRPVPYIEK 228          
BLAST of mRNA_P-wetherbeei_contig51113.1.1 vs. uniprot
Match: A0A843RKW7_9PROT (Uncharacterized protein n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A843RKW7_9PROT)

HSP 1 Score: 155 bits (392), Expect = 4.220e-44
Identity = 76/176 (43.18%), Postives = 103/176 (58.52%), Query Frame = 1
Query:    1 HRGNVDNPAVRKVAWFSYLDGGDIRDTCAPGSPDRFRLVYNGQYENQIRSYEITSDGTSNDGAYYIARAMGSPNLL--DWTTNDLLAPWRWQKSEMTLKPAEFTQFRDLLAASGWDQGAPQGKRLHSQDFYWVAAGCRDGQFHYDAWVHAQGDFPEIKFQDFLLAHDKTGMAFRQP 522
            +RG++DNP   K  W SYL+G DIR  C  G+P R+RL+YN  Y+ Q+RSYE+  DG    GA   AR +G   L+  + T +D LA  RW +SE  L      +F   LAASG    APQG +L S++ YW++  CRDG FH++AW      +  I F   L A D+TG+  R+P
Sbjct:   26 YRGDIDNPLTLKATWLSYLNGDDIRAACVEGAPPRYRLIYNADYDEQLRSYELVGDGAG--GAQLTARVLGPSGLVVNEVTFSDPLAFTRWTRSEARLDAGRLAEFDAALAASGAFAPAPQGLQLFSKETYWISNLCRDGVFHFNAWRFPSDRYAAITFDALLFALDETGIPVREP 199          
BLAST of mRNA_P-wetherbeei_contig51113.1.1 vs. uniprot
Match: UPI0014211EAC (hypothetical protein n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI0014211EAC)

HSP 1 Score: 152 bits (384), Expect = 8.880e-43
Identity = 77/184 (41.85%), Postives = 102/184 (55.43%), Query Frame = 1
Query:    1 HRGNVDNPAVRKVAWFSYLDGGDIRDTCAPGSPDRFRLVYNGQYENQIRSYEITSDGTSNDGAYYIARAMGSPNLL--DWTTNDLLAPWRWQKSEMTLKPAEFTQFRDLLAASGWDQGAPQGKRLHSQDFYWVAAGCRDGQFHYDAWVHAQGDFPEIKFQDFLLAHDKTGMAFRQPHKVLPIDR 546
            ++G +DNP   K  WFSYL+G DIR  CA G+  R+RLVYN  Y+ Q+RSYE+  DG    GA   AR  G   L+      +D LA  RW  S+  L      +  + L  SG    AP G RL S++ YWV++ C+DG F ++AWV+    F EI F D L  HD TG+  R P  + P +R
Sbjct:   36 YQGAIDNPTTIKATWFSYLNGDDIRQACAEGATLRYRLVYNADYDEQLRSYELVGDGAG--GAALTARVQGPSGLVVSKLRLDDPLAWARWTTSQAALDAPALGRLDEALERSGAFGPAPTGLRLFSKETYWVSSLCKDGVFSFNAWVYPSERFDEISFNDLLFGHDATGVTVRPPQAIAPGER 217          
BLAST of mRNA_P-wetherbeei_contig51113.1.1 vs. uniprot
Match: A0A545TY10_9PROT (Uncharacterized protein n=1 Tax=Denitrobaculum tricleocarpae TaxID=2591009 RepID=A0A545TY10_9PROT)

HSP 1 Score: 150 bits (379), Expect = 4.370e-42
Identity = 78/187 (41.71%), Postives = 106/187 (56.68%), Query Frame = 1
Query:    1 HRGNVDNPAVRKVAWFSYLDGGDIRDTCAPGSPDRFRLVYNGQYENQIRSYEITSDGTSNDGAYYIARAMGSPNLLDWTTNDLLAPWR---WQKSEMTLKPAEFTQFRDLLAASGWDQGAPQGKRLHSQDFYWVAAGCRDGQFHYDAWVHAQGDFPEIKFQDFLLAHDKTGMAFRQPHKVLPIDRMQ 552
            +RG +D P  +K  WFSYL+G DIR  C PGS   +RL+YNG+Y+ QIRSYE+  DG    GA   AR      + D T   +  P +   W K+E  L   E  QF   L ASG  +   +G RL S +FYW+A  C DG F ++AW +    + E+KF + LLA D+TG+AF  P  +   +R+Q
Sbjct:   32 YRGQIDRPFTQKATWFSYLNGDDIRARCQPGSGFEYRLIYNGRYDEQIRSYEMVDDGAG--GARLTARVQEGIGI-DVTKLSVTNPLKKNAWTKAERVLTTDERIQFEKALEASGAGRATSEGLRLFSGEFYWLANICHDGVFVFNAWRYPSDRYGELKFPELLLAMDETGVAFNPPRFIPAAERIQ 215          
BLAST of mRNA_P-wetherbeei_contig51113.1.1 vs. uniprot
Match: A0A7C7KNB6_9PROT (Uncharacterized protein n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A7C7KNB6_9PROT)

HSP 1 Score: 149 bits (375), Expect = 1.950e-41
Identity = 79/182 (43.41%), Postives = 103/182 (56.59%), Query Frame = 1
Query:    1 HRGNVDNPAVRKVAWFSYLDGGDIRDTCAPGSPDRFRLVYNGQYENQIRSYEITSDGTSNDGAYYIARAMGSPNLLDWTTNDLLAP--W-RWQKSEMTLKPAEFTQFRDLLAASGWDQGAPQGKRLHSQDFYWVAAGCRDGQFHYDAWVHAQGDFPEIKFQDFLLAHDKTGMAFRQPHKVLP 537
            +RG++DNPA  K  WFSYL+G DIR  C  G+PD FRLVYN  Y  Q+RSYE+       DG   +AR  G P+ L  +  +L  P  W RW  SE  L P +  +    L  SG  Q AP G  L+S++ YWV++ CR+G F ++AW+     F EI F + L AHD T +A R P    P
Sbjct:   35 YRGDIDNPAKLKATWFSYLNGDDIRQRCVEGAPDEFRLVYNADYNEQLRSYEVFEQAAG-DGRL-LARVQG-PSGLQVSRLELRDPLAWARWTTSETALDPEDLARLTAALERSGAFQPAPAGLNLYSEETYWVSSLCREGVFSFNAWLFPSERFAEIAFAEVLFAHDGTEVAVRPPKDAPP 213          
BLAST of mRNA_P-wetherbeei_contig51113.1.1 vs. uniprot
Match: UPI00115EE8F9 (hypothetical protein n=1 Tax=Telmatospirillum sp. J64-1 TaxID=2502183 RepID=UPI00115EE8F9)

HSP 1 Score: 147 bits (370), Expect = 6.010e-41
Identity = 67/175 (38.29%), Postives = 93/175 (53.14%), Query Frame = 1
Query:   13 VDNPAVRKVAWFSYLDGGDIRDTCAPGSPDRFRLVYNGQYENQIRSYEITSDGTSNDGAYYIARAMGSPNLLDWTTNDLLAPWRWQKSEMTLKPAEFTQFRDLLAASGWDQGAPQGKRLHSQDFYWVAAGCRDGQFHYDAWVHAQGDFPEIKFQDFLLAHDKTGMAFRQPHKVLP 537
            +D+P  R+V WF+++ G DIRD C  G PDR+R++YNG YE Q+R YEI  +G          R  G      WTT DL+ PWR  +  + L  A++       A SG     P G  L S+  +W AA C  GQ+H+ AW++    +  +     LLA D TG+AFR P   +P
Sbjct:   29 MDDPVSRRVTWFTFVQGNDIRDACGAGQPDRYRVIYNGDYEEQVRVYEIGREGPRR--LIQEVRGGGVDLSEGWTTGDLMGPWRGTREVVELSDAQYATLISAFAESGMFAPPPVGLHLESERHFWTAAACHQGQYHFTAWLYPSERYERMTLDAALLALDVTGVAFRPPQATVP 201          
BLAST of mRNA_P-wetherbeei_contig51113.1.1 vs. uniprot
Match: UPI001908F743 (hypothetical protein n=1 Tax=Rhodovibrio sodomensis TaxID=1088 RepID=UPI001908F743)

HSP 1 Score: 147 bits (370), Expect = 9.580e-41
Identity = 80/179 (44.69%), Postives = 105/179 (58.66%), Query Frame = 1
Query:    1 HRGNVDNPAVRKVAWFSYLDGGDIRDTCAPGSPDRF--RLVYNGQYENQIRSYEITSDGTSNDGAYYIARAM--GSPNLLDWTTNDLLAPWRWQKSEMTLKPAEFTQFRDLLAASGWDQGAPQGKRLHSQDFYWVAAGCRDGQFHYDAWVHAQGDFPEIKFQDFLLAHDKTGMAFRQPH 525
            + G ++NP +RK  WFSYL+G DIRD C    PDRF  RLVYNG++  Q+RSYEI SDG    GA   ARAM   + NLL +  +D LA  RW++S +TL PAE  Q    LA SG  + AP G  L S   YWV+  CRDG+  ++AW      + + +    +   D TG+ F +PH
Sbjct:   33 YSGGIENPLIRKATWFSYLNGDDIRDRCE-SLPDRFEVRLVYNGKFTEQVRSYEIKSDGAG--GARVTARAMPQDAGNLLKFRLSDPLATGRWEQSTVTLSPAEREQLVARLADSGVFRRAPSGIDLKSWGSYWVSIACRDGEVFFNAWKAGSERWDQQQLWQIVRPLDNTGVPFYEPH 208          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig51113.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5C7NKN9_9PROT1.620e-6855.98Uncharacterized protein n=1 Tax=Rhodospirillaceae ... [more]
UPI000E5C6B7E3.240e-5645.90hypothetical protein n=1 Tax=Algihabitans albus Ta... [more]
A0A5J6MUZ0_9PROT2.680e-5046.37Uncharacterized protein n=2 Tax=Hypericibacter adh... [more]
A0A4R6WLG3_9PROT3.280e-4441.85Uncharacterized protein n=2 Tax=Dongia mobilis Tax... [more]
A0A843RKW7_9PROT4.220e-4443.18Uncharacterized protein n=1 Tax=Kiloniellaceae bac... [more]
UPI0014211EAC8.880e-4341.85hypothetical protein n=1 Tax=Pelagibius litoralis ... [more]
A0A545TY10_9PROT4.370e-4241.71Uncharacterized protein n=1 Tax=Denitrobaculum tri... [more]
A0A7C7KNB6_9PROT1.950e-4143.41Uncharacterized protein n=1 Tax=Kiloniellaceae bac... [more]
UPI00115EE8F96.010e-4138.29hypothetical protein n=1 Tax=Telmatospirillum sp. ... [more]
UPI001908F7439.580e-4144.69hypothetical protein n=1 Tax=Rhodovibrio sodomensi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig51113contigP-wetherbeei_contig51113:1..555 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1380391.JIAS01000012_gene4051
Model size555
Max annot lvl204441|Rhodospirillales
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.85e-65
EggNOG OGs2DYJG@1|root,32V5J@2|Bacteria,1N0CX@1224|Proteobacteria,2UE4E@28211|Alphaproteobacteria,2JTJD@204441|Rhodospirillales
Cds size555
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186768.4057634-CDS-P-wetherbeei_contig51113:0..5551683186768.4057634-CDS-P-wetherbeei_contig51113:0..555Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig51113 1..555 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig51113.1.1prot_P-wetherbeei_contig51113.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig51113 1..555 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig51113.1.1

>prot_P-wetherbeei_contig51113.1.1 ID=prot_P-wetherbeei_contig51113.1.1|Name=mRNA_P-wetherbeei_contig51113.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=185bp
HRGNVDNPAVRKVAWFSYLDGGDIRDTCAPGSPDRFRLVYNGQYENQIRS
YEITSDGTSNDGAYYIARAMGSPNLLDWTTNDLLAPWRWQKSEMTLKPAE
FTQFRDLLAASGWDQGAPQGKRLHSQDFYWVAAGCRDGQFHYDAWVHAQG
DFPEIKFQDFLLAHDKTGMAFRQPHKVLPIDRMQQ
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mRNA from alignment at P-wetherbeei_contig51113:1..555+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig51113.1.1 ID=mRNA_P-wetherbeei_contig51113.1.1|Name=mRNA_P-wetherbeei_contig51113.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=555bp|location=Sequence derived from alignment at P-wetherbeei_contig51113:1..555+ (Phaeothamnion wetherbeei SAG_119_79)
CACCGGGGCAATGTCGATAACCCGGCGGTCCGGAAGGTCGCCTGGTTCAG CTACCTGGATGGCGGCGACATCCGGGACACCTGCGCGCCGGGCAGCCCGG ACCGCTTCCGGCTGGTCTATAACGGCCAGTACGAGAACCAGATCAGGTCG TACGAGATCACCAGCGACGGGACCAGCAATGACGGCGCGTATTACATCGC CCGGGCGATGGGCTCGCCGAACCTGCTCGATTGGACGACCAACGACCTGC TGGCGCCATGGCGCTGGCAAAAATCGGAAATGACCCTGAAGCCCGCGGAA TTCACCCAGTTCCGCGATCTTTTGGCCGCCAGCGGCTGGGACCAGGGCGC GCCGCAAGGCAAGCGGCTCCATTCGCAGGACTTCTATTGGGTGGCGGCGG GCTGCCGCGACGGACAATTCCACTACGACGCCTGGGTGCATGCCCAGGGC GACTTCCCTGAGATCAAGTTCCAGGACTTCCTCCTGGCACATGACAAGAC CGGCATGGCCTTCCGGCAACCGCACAAGGTGCTGCCGATCGACCGCATGC AGCAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig51113:1..555+

>mRNA_P-wetherbeei_contig51113.1.1 ID=mRNA_P-wetherbeei_contig51113.1.1|Name=mRNA_P-wetherbeei_contig51113.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=555bp|location=Sequence derived from alignment at P-wetherbeei_contig51113:1..555+ (Phaeothamnion wetherbeei SAG_119_79)
CACCGGGGCAATGTCGATAACCCGGCGGTCCGGAAGGTCGCCTGGTTCAG
CTACCTGGATGGCGGCGACATCCGGGACACCTGCGCGCCGGGCAGCCCGG
ACCGCTTCCGGCTGGTCTATAACGGCCAGTACGAGAACCAGATCAGGTCG
TACGAGATCACCAGCGACGGGACCAGCAATGACGGCGCGTATTACATCGC
CCGGGCGATGGGCTCGCCGAACCTGCTCGATTGGACGACCAACGACCTGC
TGGCGCCATGGCGCTGGCAAAAATCGGAAATGACCCTGAAGCCCGCGGAA
TTCACCCAGTTCCGCGATCTTTTGGCCGCCAGCGGCTGGGACCAGGGCGC
GCCGCAAGGCAAGCGGCTCCATTCGCAGGACTTCTATTGGGTGGCGGCGG
GCTGCCGCGACGGACAATTCCACTACGACGCCTGGGTGCATGCCCAGGGC
GACTTCCCTGAGATCAAGTTCCAGGACTTCCTCCTGGCACATGACAAGAC
CGGCATGGCCTTCCGGCAACCGCACAAGGTGCTGCCGATCGACCGCATGC
AGCAG
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