mRNA_P-wetherbeei_contig51082.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig51082.1.1 vs. uniprot
Match: A0A2P8NCU1_9HYPH (Sugar transporter n=3 Tax=Nitratireductor TaxID=245876 RepID=A0A2P8NCU1_9HYPH) HSP 1 Score: 214 bits (546), Expect = 2.020e-68 Identity = 98/151 (64.90%), Postives = 122/151 (80.79%), Query Frame = 1
Query: 1 IVSAINAIIRKTFDTSSNAWLELQWLLFGAVFMLAAAYTLQRNAHVRIDVVSSHLAKRTREWIDLVCHIVMLLPFVLVMIWLGGPFFWESFRDGEISSNAGGLVVWPSKFFVLAGFVLLLAQMISETIKRAGYLTGDLREPEPPPSHGLMP 453
++SA NA IRK FD SSNAWLELQW L+G VFMLAAAYTLQRN HVRID++S+ L+KRTR+W+DL+CHI LLPFV++M+WL P+FW S+R GEIS+NAGGLV+WP+K VLAGF+LL AQ +SE +KR L GD+ +P P SH + P
Sbjct: 31 LISAGNASIRKAFDISSNAWLELQWYLYGTVFMLAAAYTLQRNEHVRIDILSNRLSKRTRDWVDLICHITFLLPFVVLMVWLCWPWFWLSYRSGEISANAGGLVIWPAKMMVLAGFILLTAQALSEIVKRIAVLRGDIDDPTP--SHDMPP 179
BLAST of mRNA_P-wetherbeei_contig51082.1.1 vs. uniprot
Match: A0A4R6WV59_9PROT (TRAP-type mannitol/chloroaromatic compound transport system permease small subunit n=1 Tax=Dongia mobilis TaxID=578943 RepID=A0A4R6WV59_9PROT) HSP 1 Score: 211 bits (536), Expect = 7.130e-67 Identity = 102/151 (67.55%), Postives = 120/151 (79.47%), Query Frame = 1
Query: 1 IVSAINAIIRKTFDTSSNAWLELQWLLFGAVFMLAAAYTLQRNAHVRIDVVSSHLAKRTREWIDLVCHIVMLLPFVLVMIWLGGPFFWESFRDGEISSNAGGLVVWPSKFFVLAGFVLLLAQMISETIKRAGYLTGDLREPEPPPSHGLMP 453
+VSA NAIIRK FDTSSNAWLELQW LFGAVFMLAAAYTLQRN H+RIDV+SS L+KRTR+WIDLVCHIV LLPFV +M+WL PF +S+ E+S NAGGL++WP+K +LAGF+LLLAQ SE IKRA + G + EP P H + P
Sbjct: 31 LVSAGNAIIRKAFDTSSNAWLELQWYLFGAVFMLAAAYTLQRNEHIRIDVLSSRLSKRTRDWIDLVCHIVFLLPFVGMMVWLSTPFLIDSYASQEMSMNAGGLIIWPAKAIILAGFILLLAQAFSEIIKRAAVIAGLIDEPYP--QHAVPP 179
BLAST of mRNA_P-wetherbeei_contig51082.1.1 vs. uniprot
Match: UPI001AE975EF (TRAP transporter small permease subunit n=1 Tax=Rhizobium halophytocola TaxID=735519 RepID=UPI001AE975EF) HSP 1 Score: 205 bits (522), Expect = 6.930e-65 Identity = 94/154 (61.04%), Postives = 119/154 (77.27%), Query Frame = 1
Query: 1 IVSAINAIIRKTFDTSSNAWLELQWLLFGAVFMLAAAYTLQRNAHVRIDVVSSHLAKRTREWIDLVCHIVMLLPFVLVMIWLGGPFFWESFRDGEISSNAGGLVVWPSKFFVLAGFVLLLAQMISETIKRAGYLTGDLREPEPPPSHGLMPEDL 462
+VSA NAI+RK FD SSNAWLELQW L+G VFMLAAAY L +N H+RIDVVS+H +KRTR+WIDLV HI+ L+PF +M+WL P+FW SFR GE+S+NAGGL++WP+K VL GF+LL AQ ISE IKRA + G + +PE H + ++L
Sbjct: 31 LVSAGNAIVRKMFDISSNAWLELQWYLYGTVFMLAAAYALLQNEHIRIDVVSAHWSKRTRDWIDLVLHIIFLVPFAFLMVWLAWPWFWLSFRSGEMSTNAGGLIIWPAKAMVLIGFILLSAQAISEIIKRAAIIAGRIEDPEGNQPHASVEKEL 184
BLAST of mRNA_P-wetherbeei_contig51082.1.1 vs. uniprot
Match: UPI0012EE0C35 (TRAP transporter small permease subunit n=1 Tax=Mesorhizobium xinjiangense TaxID=2678685 RepID=UPI0012EE0C35) HSP 1 Score: 204 bits (520), Expect = 1.810e-64 Identity = 97/156 (62.18%), Postives = 120/156 (76.92%), Query Frame = 1
Query: 1 IVSAINAIIRKTFDTSSNAWLELQWLLFGAVFMLAAAYTLQRNAHVRIDVVSSHLAKRTREWIDLVCHIVMLLPFVLVMIWLGGPFFWESFRDGEISSNAGGLVVWPSKFFVLAGFVLLLAQMISETIKRAGYLTGDLREPEPPPSHGLMPEDLGV 468
++SA NA +RKTFD SSNAWLELQW L+G VFMLAAAYTL+RN HVRID++++ L+KRTR+WIDL+CHIV LLPFVL+M+ L P+FW S+ GE+SSNAGGL++WP+K VL GF+LL AQ SE IKR G + G + EP P H L P G
Sbjct: 31 LISAGNATVRKTFDISSNAWLELQWYLYGTVFMLAAAYTLKRNEHVRIDILANRLSKRTRDWIDLICHIVFLLPFVLLMVRLCWPWFWLSYNSGEMSSNAGGLILWPAKMMVLLGFILLTAQAFSEIIKRWGVIRGLIDEPNP--QHDLPPAAEGA 184
BLAST of mRNA_P-wetherbeei_contig51082.1.1 vs. uniprot
Match: A0A1X4IVA5_9RHOB (Uncharacterized protein n=2 Tax=Pseudoruegeria sp. SK021 TaxID=1933035 RepID=A0A1X4IVA5_9RHOB) HSP 1 Score: 202 bits (513), Expect = 2.030e-63 Identity = 95/152 (62.50%), Postives = 113/152 (74.34%), Query Frame = 1
Query: 1 IVSAINAIIRKTFDTSSNAWLELQWLLFGAVFMLAAAYTLQRNAHVRIDVVSSHLAKRTREWIDLVCHIVMLLPFVLVMIWLGGPFFWESFRDGEISSNAGGLVVWPSKFFVLAGFVLLLAQMISETIKRAGYLTGDLREPEPPPSHGLMPE 456
+VSA NA++RK FD SSNAWLELQW LFGAVFMLAAA+TLQ+N HVRIDV+SS L +RTR WIDL+CHI L+PF +M+WL PFFW S+ GE S NAGGL++WP+KF VL GF++L+ Q ISE IK L GDL P L PE
Sbjct: 18 LVSATNAVVRKAFDLSSNAWLELQWYLFGAVFMLAAAWTLQKNEHVRIDVISSRLKQRTRIWIDLICHIGFLMPFATLMVWLSWPFFWRSWSSGEQSMNAGGLILWPAKFLVLLGFIILIMQGISEIIKTVAILHGDLPPPGDSDEDHLPPE 169
BLAST of mRNA_P-wetherbeei_contig51082.1.1 vs. uniprot
Match: A0A0C1YG74_9CYAN (Sugar transporter n=4 Tax=Bacteria TaxID=2 RepID=A0A0C1YG74_9CYAN) HSP 1 Score: 202 bits (513), Expect = 2.380e-63 Identity = 99/159 (62.26%), Postives = 117/159 (73.58%), Query Frame = 1
Query: 1 IVSAINAIIRKTFDTSSNAWLELQWLLFGAVFMLAAAYTLQRNAHVRIDVVSSHLAKRTREWIDLVCHIVMLLPFVLVMIWLGGPFFWESFRDGEISSNAGGLVVWPSKFFVLAGFVLLLAQMISETIKRAGYLTGDLREPEPPPSHGLMPEDLGVEGG 477
+VSA NA IRK FDTSSNAWLELQW L+GAVFMLAA+YTL RN HVRIDV +S +KRTR+WIDL+ HI L+PF +MIW+ PFFW SFR GEIS NA GL++WP+KF VLAGFVLL Q +SE IKR + GD+ +P H L P +E G
Sbjct: 31 LVSAGNATIRKMFDTSSNAWLELQWYLYGAVFMLAASYTLLRNEHVRIDVATSGFSKRTRDWIDLLGHIFFLMPFAGIMIWISWPFFWVSFRTGEISVNASGLILWPAKFLVLAGFVLLFCQGVSEIIKRIAVIRGDIEDPTA--EHELPPAVEEMESG 187
BLAST of mRNA_P-wetherbeei_contig51082.1.1 vs. uniprot
Match: A0A5B8L1I1_9HYPH (TRAP transporter small permease subunit n=1 Tax=Nitratireductor sp. SY7 TaxID=2599600 RepID=A0A5B8L1I1_9HYPH) HSP 1 Score: 199 bits (507), Expect = 1.710e-62 Identity = 89/143 (62.24%), Postives = 116/143 (81.12%), Query Frame = 1
Query: 1 IVSAINAIIRKTFDTSSNAWLELQWLLFGAVFMLAAAYTLQRNAHVRIDVVSSHLAKRTREWIDLVCHIVMLLPFVLVMIWLGGPFFWESFRDGEISSNAGGLVVWPSKFFVLAGFVLLLAQMISETIKRAGYLTGDLREPEP 429
++SA NA IRK FD SSNA+LELQW L+G VFMLAAAYTLQRN HVRID++S+ L+KRTR+W+DLVCH++ LLPFV +M++L P+FW S+R GEIS+NAGGL++WP+K VL GF+LL Q +SE +KR + GD+ +P P
Sbjct: 31 LISAGNASIRKAFDISSNAFLELQWYLYGTVFMLAAAYTLQRNEHVRIDILSNRLSKRTRDWVDLVCHVIFLLPFVTLMVYLCWPWFWLSYRTGEISANAGGLIIWPAKMMVLLGFMLLTGQALSEIVKRIAVIRGDIDDPTP 173
BLAST of mRNA_P-wetherbeei_contig51082.1.1 vs. uniprot
Match: UPI001E632987 (TRAP transporter small permease subunit n=1 Tax=Rhizobium sp. C1 TaxID=1349799 RepID=UPI001E632987) HSP 1 Score: 199 bits (506), Expect = 1.870e-62 Identity = 93/141 (65.96%), Postives = 115/141 (81.56%), Query Frame = 1
Query: 1 IVSAINAIIRKTFDTSSNAWLELQWLLFGAVFMLAAAYTLQRNAHVRIDVVSSHLAKRTREWIDLVCHIVMLLPFVLVMIWLGGPFFWESFRDGEISSNAGGLVVWPSKFFVLAGFVLLLAQMISETIKRAGYLTGDLREP 423
+VSAINA++RK FD SSNAWLELQW LFGAVF+LAAAYTLQ+N H+RID++SS +KRTR+ IDLV HI+ LLPF +M++L +FW SFR GE+S+NAGGLV+WP+K FVL GF+LL AQ SE IKR G LTG + +P
Sbjct: 31 LVSAINAVVRKIFDMSSNAWLELQWYLFGAVFLLAAAYTLQKNEHIRIDILSSTWSKRTRDIIDLVLHIIFLLPFSSLMVYLSWSWFWLSFRTGEVSANAGGLVIWPAKSFVLIGFILLTAQAFSEIIKRIGVLTGRIEDP 171
BLAST of mRNA_P-wetherbeei_contig51082.1.1 vs. uniprot
Match: A0A0N0E6U1_9HYPH (Sugar transporter n=1 Tax=Ahrensia marina TaxID=1514904 RepID=A0A0N0E6U1_9HYPH) HSP 1 Score: 199 bits (506), Expect = 2.750e-62 Identity = 92/141 (65.25%), Postives = 115/141 (81.56%), Query Frame = 1
Query: 1 IVSAINAIIRKTFDTSSNAWLELQWLLFGAVFMLAAAYTLQRNAHVRIDVVSSHLAKRTREWIDLVCHIVMLLPFVLVMIWLGGPFFWESFRDGEISSNAGGLVVWPSKFFVLAGFVLLLAQMISETIKRAGYLTGDLREP 423
+VSA NAIIRK FDTSSNAWLELQW L+GAVF+LAAAYTLQRN HVRID+ +S L K+TR+WIDL+ HI+ L+PF ++M++LG PFFW SF++GEIS NAGGL +WP+K +LA F+LL AQ ISE IKR + G + +P
Sbjct: 31 LVSAGNAIIRKAFDTSSNAWLELQWYLYGAVFLLAAAYTLQRNEHVRIDIATSGLTKKTRDWIDLLGHILFLMPFCILMVYLGWPFFWNSFQNGEISLNAGGLTIWPAKLLILASFILLSAQGISEIIKRWAVIRGIIDDP 171
BLAST of mRNA_P-wetherbeei_contig51082.1.1 vs. uniprot
Match: A0A847ZZ73_9HYPH (TRAP transporter small permease subunit n=1 Tax=Phyllobacteriaceae bacterium TaxID=1871068 RepID=A0A847ZZ73_9HYPH) HSP 1 Score: 198 bits (503), Expect = 8.110e-62 Identity = 95/140 (67.86%), Postives = 109/140 (77.86%), Query Frame = 1
Query: 1 IVSAINAIIRKTFDTSSNAWLELQWLLFGAVFMLAAAYTLQRNAHVRIDVVSSHLAKRTREWIDLVCHIVMLLPFVLVMIWLGGPFFWESFRDGEISSNAGGLVVWPSKFFVLAGFVLLLAQMISETIKRAGYLTGDLRE 420
+VS +NAIIRK FD+SSNAWLE+Q LLFG F+ AAAY LQ+NAHVRIDVVSS L+KRTR+WIDL H+ ML P ++MIWL PFFWES+ + E SSNAGGL VWP K FVL GF+LL AQMISE IKR L G L E
Sbjct: 31 LVSTVNAIIRKVFDSSSNAWLEMQTLLFGIAFLGAAAYVLQKNAHVRIDVVSSRLSKRTRDWIDLFGHLFMLAPLTIIMIWLSVPFFWESYVNAEASSNAGGLPVWPYKLFVLVGFILLFAQMISEVIKRIAVLGGHLHE 170 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig51082.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig51082.1.1 >prot_P-wetherbeei_contig51082.1.1 ID=prot_P-wetherbeei_contig51082.1.1|Name=mRNA_P-wetherbeei_contig51082.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=163bp IVSAINAIIRKTFDTSSNAWLELQWLLFGAVFMLAAAYTLQRNAHVRIDVback to top mRNA from alignment at P-wetherbeei_contig51082:3..491+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig51082.1.1 ID=mRNA_P-wetherbeei_contig51082.1.1|Name=mRNA_P-wetherbeei_contig51082.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=489bp|location=Sequence derived from alignment at P-wetherbeei_contig51082:3..491+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig51082:3..491+ >mRNA_P-wetherbeei_contig51082.1.1 ID=mRNA_P-wetherbeei_contig51082.1.1|Name=mRNA_P-wetherbeei_contig51082.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=489bp|location=Sequence derived from alignment at P-wetherbeei_contig51082:3..491+ (Phaeothamnion wetherbeei SAG_119_79)back to top |