mRNA_P-wetherbeei_contig509.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig509.6.1
Unique NamemRNA_P-wetherbeei_contig509.6.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig509.6.1 vs. uniprot
Match: D7FSF4_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSF4_ECTSI)

HSP 1 Score: 387 bits (994), Expect = 2.520e-126
Identity = 218/384 (56.77%), Postives = 275/384 (71.61%), Query Frame = 1
Query:    1 FSTLPISEETARAIREVLKYNNMTMVQELAMPVCLEGVDVLARAKTGTGKTLAFLIPAIERAARARAAAGGSLDGTSCLVISPTRELAAQIAKEAELLATFHGKGRDRMTVDIAVGGACKPAADLKRFRGSPPVILVATPGRLLDHLENGGLRPMFRDLDTLVLDEADRLLDMGFKRDVEKILSSEGGGAGGRQALMFSATLPDDVASVASSVLASGYRTIDCIGEQEDGTHAHVPQEYMVVPLEQQAAALMALLADLISAADGGNHKIIVFFAAARLVQLHAALAEALGLPVLETHSRKSQAHRDRVSEEFRRGRNIIMFTSDVSARGLDYPDVTTVVQVGLPTDRAQYIHRLGRTARAGKDGRGILLLADFERRFLKEVSDL 1152
            F+ L +S+ T  AI +VL Y NMT VQE ++PVCL GVDVLA+AKTGTGKT+AFLIPAIERAA+      G   G S L+ISPTRELA QIA EA+ + +FH     R+ +  +VGG      DL +     P I+VATPGRLLD +EN GL    RDLDTLV DEAD+LL+MGF+  +E IL +       RQ LMFSAT+P DV ++AS  +   Y  +DC+GE+E+ TH HVPQ++ VVP+ +Q   +  LLA ++ A +  +HKIIVFF AAR+VQLHA L   +G+ VLETHSRKSQA R RV+E FR G+  IMFTSDVSARG+DYPDV+ V+QVGLP+D  QY+HRLGRTARAGK G G+L+LA+ E+ F++EV DL
Sbjct:  109 FNDLDLSKNTHAAISDVLGYANMTKVQEQSIPVCLTGVDVLAKAKTGTGKTVAFLIPAIERAAKR-----GFGKGVSALIISPTRELAQQIAVEAQQIMSFH-----RLKLMCSVGGV-NVNRDLNQLNSGAPDIMVATPGRLLDLMENHGLGRDMRDLDTLVFDEADQLLEMGFRPAIENILRNLQASKTYRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEEN-THQHVPQKFAVVPMAEQ---IPRLLATILKAKEDPDHKIIVFFVAARIVQLHAELFTQMGVDVLETHSRKSQAARTRVAEAFRNGKGQIMFTSDVSARGMDYPDVSLVIQVGLPSDTNQYVHRLGRTARAGKGGSGLLVLAEAEKGFIREVGDL 477          
BLAST of mRNA_P-wetherbeei_contig509.6.1 vs. uniprot
Match: A0A6H5JHU6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHU6_9PHAE)

HSP 1 Score: 376 bits (966), Expect = 6.950e-124
Identity = 216/386 (55.96%), Postives = 273/386 (70.73%), Query Frame = 1
Query:    1 FSTLPISEETARAIREVLKYNNMTMVQELAMPVCLEGVDVLARAKTGTGKTLAFLIPAIERAARARAAAGGSLDGTSCLVISPTRELAAQIAKEAE--LLATFHGKGRDRMTVDIAVGGACKPAADLKRFRGSPPVILVATPGRLLDHLENGGLRPMFRDLDTLVLDEADRLLDMGFKRDVEKILSSEGGGAGGRQALMFSATLPDDVASVASSVLASGYRTIDCIGEQEDGTHAHVPQEYMVVPLEQQAAALMALLADLISAADGGNHKIIVFFAAARLVQLHAALAEALGLPVLETHSRKSQAHRDRVSEEFRRGRNIIMFTSDVSARGLDYPDVTTVVQVGLPTDRAQYIHRLGRTARAGKDGRGILLLADFERRFLKEVSDL 1152
            FS + +S+ T  AI +VL Y NMT VQE ++PVCL GVDVLA+AKTGTGKT+AFLIPAIERAA+      G   G S L+ISPTRELA QIA EA+   + +FH     R+ +  +VGG      DL +     P I+VATPGRLLD LEN GL    RDLDTL+ DEAD+LL+MGF+  +E IL +       RQ LMFSAT+P DV ++AS  +   Y  +DC+GE+E+ TH HVPQ++ VVP+ +Q   +  LLA ++ A +  +HKIIVFF AAR+  LHA L   +G+ VLETHSRKSQA R RV+E FR G+  IMFTSDVSARG+DYPDV+ V+QVGLP+D  QY+HRLGRTARAGK G G+L+LA+ E+ F++EV DL
Sbjct:   47 FSDVNLSKNTHAAISDVLGYANMTKVQEQSIPVCLTGVDVLAKAKTGTGKTVAFLIPAIERAAKR-----GFGKGVSALIISPTRELAQQIAVEAQQACIMSFH-----RLKLMCSVGGV-NVNRDLNQLNSGAPDIMVATPGRLLDLLENHGLGRSMRDLDTLIFDEADQLLEMGFRPAIENILRNLQASKASRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEEN-THQHVPQKFAVVPMAEQ---IPRLLATILKAKEDPDHKIIVFFVAARI--LHAELFTHMGVDVLETHSRKSQAARTRVAEAFRNGKGQIMFTSDVSARGMDYPDVSLVIQVGLPSDTNQYVHRLGRTARAGKGGSGLLVLAEAEKGFIREVGDL 415          
BLAST of mRNA_P-wetherbeei_contig509.6.1 vs. uniprot
Match: A0A835ZDJ4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDJ4_9STRA)

HSP 1 Score: 363 bits (931), Expect = 4.060e-119
Identity = 207/384 (53.91%), Postives = 258/384 (67.19%), Query Frame = 1
Query:    1 FSTLPISEETARAIREVLKYNNMTMVQELAMPVCLEGVDVLARAKTGTGKTLAFLIPAIERAARARAAAGGSLDGTSCLVISPTRELAAQIAKEAELLATFHGKGRDRMTVDIAVGGACKPAADLKRFRGSPPVILVATPGRLLDHLENGGLRPMFRDLDTLVLDEADRLLDMGFKRDVEKILSSEGGGAGGRQALMFSATLPDDVASVASSVLASGYRTIDCIGEQEDGTHAHVPQEYMVVPLEQQAAALMALLADLISAADGGNHKIIVFFAAARLVQLHAALAEALGLPVLETHSRKSQAHRDRVSEEFRRGRNIIMFTSDVSARGLDYPDVTTVVQVGLPTDRAQYIHRLGRTARAGKDGRGILLLADFERRFLKEVSDL 1152
            F +LPI+ +  R I + + Y  MT VQ   +PV L GVD+LA+AKTGTGKTLAFLIP +ERA R+   AGG     S L+ISPTRELA QI  EA L   F G     M +    GG     ADL++   + P ILVATPGRL DHLEN  L      L  LVLDEAD+LL+MGF+  +E  L +    +  RQ L+FSAT+P DV +++   +   +  +D +GE+E  TH HVPQ  +V  +E     L+ LL   +  ADG  HKIIVFF  ARL Q HA L  A+G+PVLE HSRKSQ+ R +VS++FR G  +IMFTSDV+ARG+DYPDVT+V+QVG+P+D+AQYIHRLGRTARAGK GRG+LLL DFE  FL+EVSDL
Sbjct:    6 FESLPINADLKRGITQAMGYETMTKVQSATIPVSLTGVDILAKAKTGTGKTLAFLIPCVERALRSPRRAGG----ISVLIISPTRELAQQIHDEAALATRFMG-----MRLQCIFGGT-NIKADLRKLSDATPDILVATPGRLNDHLENQTLARQLAGLSALVLDEADQLLEMGFRPAIEAALRNLPPPSA-RQTLLFSATMPQDVRAISRIAMRPDFELVDTVGEEES-THEHVPQSAVVTTMEHGVPQLLLLLRRAVHDADGA-HKIIVFFTTARLTQFHAELCNAMGMPVLEIHSRKSQSQRTKVSDQFRNGSGLIMFTSDVTARGMDYPDVTSVIQVGIPSDKAQYIHRLGRTARAGKGGRGVLLLCDFEAAFLREVSDL 376          
BLAST of mRNA_P-wetherbeei_contig509.6.1 vs. uniprot
Match: A0A5J4YBS8_9CHLO (DEAD box helicase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YBS8_9CHLO)

HSP 1 Score: 363 bits (931), Expect = 9.010e-118
Identity = 206/384 (53.65%), Postives = 263/384 (68.49%), Query Frame = 1
Query:    1 FSTLPISEETARAIREVLKYNNMTMVQELAMPVCLEGVDVLARAKTGTGKTLAFLIPAIERAARARAAAGGSLDGTSCLVISPTRELAAQIAKEAELLATFHGKGRDRMTVDIAVGGACKPAADLKRFRGSPPVILVATPGRLLDHLENGGLRPMFRDLDTLVLDEADRLLDMGFKRDVEKILSSEGGGAGGRQALMFSATLPDDVASVASSVLASGYRTIDCIGEQEDGTHAHVPQEYMVVPLEQQAAALMALLADLISAADGGNHKIIVFFAAARLVQLHAALAEALGLPVLETHSRKSQAHRDRVSEEFRRGRNIIMFTSDVSARGLDYPDVTTVVQVGLPTDRAQYIHRLGRTARAGKDGRGILLLADFERRFLKEVSDL 1152
            F+ LPI   T RA+ EVLKY+  T VQ  ++P  L+GVD++ +AKTGTGKTLAFLIPA+ER A      G +    S LVISPTRELA+QIA EAE L  FH      +TV   VGG     +++K+ + S P ILVATPGRL+DHL+N         L+TLV DEADRLLDMGF+ DVEKIL +    +  RQ L+FSAT P D+  +A   L  G++ ID +GE    + + V Q  M+VP+EQ AA L+ +LAD    A   NHK++VFF  A+L QL+A +  A G+PVLE HSRKSQ+HR +V+ +FR G  + MFTSDVSARG+DYPDV+ V+QVG+P D AQYIHR+GRTARAGK G+ ILLL DFE+ FL+ + +L
Sbjct:  113 FADLPICSATKRALAEVLKYDLCTTVQAQSVPPSLQGVDMVCKAKTGTGKTLAFLIPALERMA------GKTSGKISTLVISPTRELASQIAVEAEALGRFHD-----ITVQCVVGGT-NIDSEIKKIKRSTPHILVATPGRLVDHLQNRDAAQFMTKLETLVFDEADRLLDMGFRPDVEKILRTLPNKST-RQTLLFSATFPQDIQELAKFALRPGFQLIDTVGEDSTHSSSQVQQSVMLVPMEQMAAQLIHILAD--HRASDPNHKVLVFFTTAKLTQLYAEMCNAAGIPVLEIHSRKSQSHRTKVAGQFREGSGLTMFTSDVSARGVDYPDVSLVLQVGMPADEAQYIHRVGRTARAGKQGQAILLLHDFEQFFLRTIQEL 481          
BLAST of mRNA_P-wetherbeei_contig509.6.1 vs. uniprot
Match: A0A0M0K3J2_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K3J2_9EUKA)

HSP 1 Score: 360 bits (925), Expect = 1.110e-117
Identity = 208/388 (53.61%), Postives = 267/388 (68.81%), Query Frame = 1
Query:    1 FSTLPISEETARAIREVLKYNNMTMVQELAMPVCLEGVDVLARAKTGTGKTLAFLIPAIERAARARAAAGGSLDGTSCLVISPTRELAAQIAKEAELLATFHGKGRDRMTVDIAVGGACKPAADLKRFRGSPPVILVATPGRLLDHLENGGLRPMFRDLDTLVLDEADRLLDMGFKRDVEKILSSEGGGAGGRQALMFSATLPDDVASVASSVLASG-YRTIDCIGEQEDGTHAHVPQEYMVVPLEQQAAALMALLADLISA---ADGGNHKIIVFFAAARLVQLHAALAEALGLPVLETHSRKSQAHRDRVSEEFRRGRNIIMFTSDVSARGLDYPDVTTVVQVGLPTDRAQYIHRLGRTARAGKDGRGILLLADFERRFLKEVSDL 1152
            F +L IS  T +AI EV+ Y  ++ VQ   +PV L+G DV+A+AKTGTGKT+ FL+P IER   A  A  G++     L ISPTRELA+QI +EAE L TFH   + R+T  +  GG     +D+K    +PP +LVATPGRL D L N G++P F +L +L+ DEAD+LL+MGF+ D+ KIL++    AG RQ L+FSAT+P DV  VA      G  + ID +GE++  THAHVPQ+  V  L  QAA L+ALL    SA    + G +K++VFF  ARL QL+A L  ALG  ++E HSRKSQ  R R ++ FR G N+IMF+SDVSARG+DYPDVT V+QVG+P+D+AQY+HRLGRTARAGK G G LLLADFE  FLKE+SDL
Sbjct:   47 FESLQISPLTKKAIAEVMGYAVLSAVQAQTLPVILQGHDVIAKAKTGTGKTIGFLLPTIERLVNAPPAPAGAI---RALAISPTRELASQIREEAEQLLTFH---KPRLTSHVVFGGT-NVKSDVKVLTTTPPALLVATPGRLNDLLYNHGMQPKFMNLISLMFDEADQLLEMGFRPDLTKILAALQPTAGQRQTLLFSATMPKDVLQVAQFATRQGDCQLIDTVGEEDQATHAHVPQKATVTSLATQAAELVALLQQATSAEGVGENGAYKVLVFFTTARLAQLYAELFTALGWSIIEMHSRKSQPQRTRAADLFRDGSNLIMFSSDVSARGMDYPDVTAVLQVGMPSDKAQYVHRLGRTARAGKAGGGHLLLADFEAGFLKELSDL 427          
BLAST of mRNA_P-wetherbeei_contig509.6.1 vs. uniprot
Match: A0A6H5L2V2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2V2_9PHAE)

HSP 1 Score: 361 bits (927), Expect = 2.010e-117
Identity = 211/384 (54.95%), Postives = 257/384 (66.93%), Query Frame = 1
Query:    1 FSTLPISEETARAIREVLKYNNMTMVQELAMPVCLEGVDVLARAKTGTGKTLAFLIPAIERAARARAAAGGSLDGTSCLVISPTRELAAQIAKEAELLATFHGKGRDRMTVDIAVGGACKPAADLKRFRGSPPVILVATPGRLLDHLENGGLRPMFRDLDTLVLDEADRLLDMGFKRDVEKILSSEGGGAGGRQALMFSATLPDDVASVASSVLASGYRTIDCIGEQEDGTHAHVPQEYMVVPLEQQAAALMALLADLISAADGGNHKIIVFFAAARLVQLHAALAEALGLPVLETHSRKSQAHRDRVSEEFRRGRNIIMFTSDVSARGLDYPDVTTVVQVGLPTDRAQYIHRLGRTARAGKDGRGILLLADFERRFLKEVSDL 1152
            F+ LP+S  T RAI EVL Y  +T VQ  ++P  L G DVLA+AKTGTGKTL+FL+PAIE  AR   A      G S L+ISPTRELA QIA EA  + TFH      M++   VGG     AD++ FR  P ++ VATPGRL DHL+N GL      L  L+ DEAD+LL+MGF+  +E IL         RQ L+FSAT+P DV  +A   L   Y  +DC+GE+E  TH HVPQ+Y V   +QQ   L  LL + + AAD   HKIIVFF  ARL Q +A L   +G PVLE HSRKSQ HR++VSE FR G+ ++MFTSDVSARG+DYPDV+ V+QVGLP+D+AQYIHRLGRTARAGK G G+LLL DFE  FL +V DL
Sbjct:   46 FAQLPLSAPTQRAIAEVLGYVTLTKVQNDSIPPALAGHDVLAKAKTGTGKTLSFLLPAIEGVARTPRA---QRKGISVLIISPTRELAQQIADEANQVLTFHD-----MSLICVVGGT-NIKADIRGFRDRPDIV-VATPGRLNDHLDNNGLAKDMAGLSHLIFDEADQLLEMGFRPAIEAILRYMPHSRD-RQTLLFSATMPGDVRKIAQLALKERYEFVDCVGEEES-THQHVPQQYTVCGQDQQVEELCQLLRENM-AADPRGHKIIVFFTTARLTQFYAELCNLMGFPVLEIHSRKSQGHRNKVSELFRNGQGLVMFTSDVSARGMDYPDVSAVIQVGLPSDKAQYIHRLGRTARAGKAGHGVLLLCDFESMFLSDVRDL 416          
BLAST of mRNA_P-wetherbeei_contig509.6.1 vs. uniprot
Match: D8LUB6_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUB6_ECTSI)

HSP 1 Score: 358 bits (919), Expect = 1.130e-115
Identity = 210/384 (54.69%), Postives = 255/384 (66.41%), Query Frame = 1
Query:    1 FSTLPISEETARAIREVLKYNNMTMVQELAMPVCLEGVDVLARAKTGTGKTLAFLIPAIERAARARAAAGGSLDGTSCLVISPTRELAAQIAKEAELLATFHGKGRDRMTVDIAVGGACKPAADLKRFRGSPPVILVATPGRLLDHLENGGLRPMFRDLDTLVLDEADRLLDMGFKRDVEKILSSEGGGAGGRQALMFSATLPDDVASVASSVLASGYRTIDCIGEQEDGTHAHVPQEYMVVPLEQQAAALMALLADLISAADGGNHKIIVFFAAARLVQLHAALAEALGLPVLETHSRKSQAHRDRVSEEFRRGRNIIMFTSDVSARGLDYPDVTTVVQVGLPTDRAQYIHRLGRTARAGKDGRGILLLADFERRFLKEVSDL 1152
            F+ LP+S  T RAI EVL Y  +T VQ  ++P  L G DVLA+AKTGTGKTL+FL PAIE  AR   A      G   L+ISPTRELA QIA EA  + TFH      M++   VGG     AD++ FR  P ++ VATPGRL DHL+N GL      L  L+ DEAD+LL+MGF+  +E IL         RQ L+FSAT+P DV  +A   L   Y  +DC+GE+E  TH HVPQ+Y V   +QQ   L  LL + + AAD   HKIIVFF  ARL Q +A L   +G PVLE HSRKSQ HR++VSE FR G+ ++MFTSDVSARG+DYPDV+ V+QVGLP+D+AQYIHRLGRTARAGK G G+LLL DFE  FL +V DL
Sbjct:  146 FAQLPLSAPTQRAIAEVLGYATLTKVQNDSIPPALAGHDVLAKAKTGTGKTLSFLFPAIEGVARTPRA---QRKGIWVLIISPTRELAQQIADEANQVLTFHD-----MSLICVVGGT-NIKADIRGFRDRPDIV-VATPGRLNDHLDNNGLAKDMAGLSHLIFDEADQLLEMGFRPAIEAILRYMPHSRD-RQTLLFSATMPGDVRKIAQLALKERYEFVDCVGEEES-THQHVPQQYTVCGQDQQVEELCQLLRENM-AADPRGHKIIVFFTTARLTQFYAELCNLMGFPVLEIHSRKSQGHRNKVSELFRNGQGLVMFTSDVSARGMDYPDVSAVIQVGLPSDKAQYIHRLGRTARAGKAGHGVLLLCDFESMFLSDVRDL 516          
BLAST of mRNA_P-wetherbeei_contig509.6.1 vs. uniprot
Match: A0A7S4D8Q7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8Q7_HETAK)

HSP 1 Score: 353 bits (906), Expect = 2.490e-114
Identity = 207/387 (53.49%), Postives = 258/387 (66.67%), Query Frame = 1
Query:    1 FSTLPISEETARAIREVLKYNNMTMVQELAMPVCLEGVDVLARAKTGTGKTLAFLIPAIERAARARAAAGGSLDGTSCLVISPTRELAAQIAKEAELLATFHGKGRDRMTVDIAVGGACKPAADLKRFRGSPPVILVATPGRLLDHLENG-GLRPMFRDLDTLVLDEADRLLDMGFKRDVEKILSSEGGGAGGRQALMFSATLPDDVASVASSVLASGYRTIDCIGEQEDGTHAHVPQEYMVVPLEQQAAALMALLADLISAADGGNHKIIVFFAAARLVQLHAALAEALGLPVLETHSRKSQAHRDRVSEEFRRGRNIIMFTSDVSARGLDYPDVTTVVQVGLPTDRAQYIHRLGRTARAG--KDGRGILLLADFERRFLKEVSDL 1152
            F+  P++  T RA+ EVL Y  MT VQ   +PV L+G DVLA+AKTGTGKTL FL+PAIER   A AAA       S LVISPTRELA QIA+EA+ L  FH  G     + +  GG  K   D+  F    P ILVATPGRLLDHLEN  G R     L  L+LDE D+LLDMGF+  + KIL      +G RQ L+FSAT+P DV  +A   L   Y  +DC+G+ E GTH  VPQ ++V  +E Q   L  ++A+         HK+IVFF  ARL Q +A +   +G+PVLE HSRKSQ HR +VS++FR G  ++MFTSDVSARG+DYPDVT V+QVG+P DRAQY+HRLGRTARAG  + GRG+LLLA+FER +L+++SDL
Sbjct:   23 FADAPLAVGTQRALAEVLGYERMTRVQAQTLPVSLQGKDVLAKAKTGTGKTLGFLLPAIERILAAPAAARRGR--VSALVISPTRELAQQIAEEAKQLLKFHDLG-----LQVVFGGT-KMTKDVSSFNRRTPDILVATPGRLLDHLENTPGFREACAGLQCLILDECDQLLDMGFRPSIVKILQHLPPKSG-RQTLLFSATMPQDVQEMARFGLNPSYELVDCVGK-EAGTHQQVPQTFLVCSVEDQLGELAQIIAE---GRQVPGHKLIVFFTTARLTQFYAEVFNFMGVPVLEIHSRKSQGHRTKVSDQFRTGNGLVMFTSDVSARGMDYPDVTGVIQVGMPADRAQYVHRLGRTARAGGREGGRGVLLLAEFERPYLRQLSDL 396          
BLAST of mRNA_P-wetherbeei_contig509.6.1 vs. uniprot
Match: R7QP73_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QP73_CHOCR)

HSP 1 Score: 341 bits (875), Expect = 4.070e-110
Identity = 199/388 (51.29%), Postives = 259/388 (66.75%), Query Frame = 1
Query:    1 FSTLPISEETARAIREVLKYNNMTMVQELAMPVCLEGVDVLARAKTGTGKTLAFLIPAIERAARARAAAGGSLDGTSCLVISPTRELAAQIAKEAELLATFHGKGRDRMTVDIAVGGACKPAADLKRFRGS-PPVILVATPGRLLDHLEN--GGLRPMFRDLDTLVLDEADRLLDMGFKRDVEKILSSEGGGAGGRQALMFSATLPDDVASVASSVLASGYRTIDCIGEQEDGTHAHVPQEYMVVPLEQQAAALMALLADLISAADGGNHKIIVFFAAARLVQLHAALAEALGLPVLETHSRKSQAHRDRVSEEFRRGRNIIMFTSDVSARGLDYPDVTTVVQVGLPTDRAQYIHRLGRTARAGKDGRGILLLADFERR-FLKEVSDL 1152
            F  LP++    RA+ EV KY+ MT VQ  A+PV LEG D+L +A+TGTGKTLAFL+P +   A++        +GT+ LVISPTRELA QIA+EA +L ++      R T+ + VGG     +DL   R S PP +LVATPGRLLDHL N   G       L  L+LDEADRLLDMGF  D+++I  +       RQ L+FSAT+P DV ++A   L   ++ +DC+GE E+ TH HV Q  +V  L  Q  AL A+LA+     D   +KIIVFF  AR  Q  + L      PVLE HSRKSQ HR +VS++FR G+++IMFTSDV+ARGLDYPDV+ V+QVGLP D++QY+HR+GRTARAGKDG G+LLLADFE + F+++ +DL
Sbjct:    6 FDALPVAPPLRRAMAEVFKYDTMTHVQSAAVPVALEGADLLVKARTGTGKTLAFLLPTLHAVAQSP-----PKNGTAVLVISPTRELAQQIAEEARMLLSY----LPRFTLQVLVGGT-NIRSDLAAVRRSGPPTLLVATPGRLLDHLGNPSSGFPAAMHTLSALILDEADRLLDMGFAPDLKRIFHAIPS-VQHRQTLLFSATMPADVENMARMALKPDFKVVDCVGEGEN-THHHVKQSMLVTSLPDQMPALAAVLAEHTKLKD---YKIIVFFTTARQTQFSSELFAMANTPVLEIHSRKSQGHRTKVSDKFRNGKSLIMFTSDVTARGLDYPDVSAVIQVGLPADKSQYVHRIGRTARAGKDGSGVLLLADFEAQSFMRKATDL 378          
BLAST of mRNA_P-wetherbeei_contig509.6.1 vs. uniprot
Match: A0A7S0QEX6_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QEX6_9CRYP)

HSP 1 Score: 343 bits (881), Expect = 1.950e-109
Identity = 207/385 (53.77%), Postives = 260/385 (67.53%), Query Frame = 1
Query:    1 FSTLPISEETARAIREVLKYNNMTMVQELAMPVCLEGVDVLARAKTGTGKTLAFLIPAIERAARARAAAGGSLDGTSCLVISPTRELAAQIAKEAELLATFHGKGRDRMTVDIAVGGACKPAADLKRFRGSPPVILVATPGRLLDHLENGGLRPMFRDLDTLVLDEADRLLDMGFKRDVEKILSSEGGGAGGRQALMFSATLPDDVASVASSVLASGYRT-IDCIGEQEDGTHAHVPQEYMVVPLEQQAAALMALLADLISAADGGNHKIIVFFAAARLVQLHAALAEALGLPVLETHSRKSQAHRDRVSEEFRRGRNIIMFTSDVSARGLDYPDVTTVVQVGLPTDRAQYIHRLGRTARAGKDGRGILLLADFERRFLKEVSDL 1152
            F+ LPI+  + RA+ EVL+Y  MT+VQ  ++P  L GVDVLA+AKTGTGKTLAFLIPA+E   RA       + G   L+ISPTRELA QI +EA  L     K +  + V   VGG  KP  DL+ FR  PP ILVATPGRL DHLEN GL+ +   L  L+LDEAD+LLDMGF+  + ++L         RQ ++FSAT+P DV ++AS  L    +  ID +G+ ED TH HV Q  +V   E     L+ L+ D +   D   +K+IVFF  AR  QL+A L   +G PVLE HSR+SQ  R++VSEEFR G  ++MFTSDVSARG+DYPDVT+V+QVGLP+DRAQYIHRLGRTARAGKDG G+LLL +FE  FL++V DL
Sbjct:  173 FNELPINALSKRALAEVLRYEFMTLVQHASIPTSLTGVDVLAKAKTGTGKTLAFLIPAVEHILRAP-----KVQGICVLIISPTRELAQQIEEEANQLC----KLQPGVRVQCIVGGT-KPGRDLEGFR-HPPDILVATPGRLNDHLENNGLQRIVTQLRCLILDEADQLLDMGFRPAILQVLRCLPPKET-RQTMLFSATMPQDVKTIASLALRDKKQAFIDTVGK-EDNTHQHVEQLAVVCTKEALLPELVMLIRDRMQTPD---YKVIVFFTTARQTQLYAELFNLMGTPVLEIHSRRSQPQRNKVSEEFRTGARLVMFTSDVSARGMDYPDVTSVIQVGLPSDRAQYIHRLGRTARAGKDGAGVLLLCEFESFFLQDVKDL 541          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig509.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSF4_ECTSI2.520e-12656.77DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5JHU6_9PHAE6.950e-12455.96Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835ZDJ4_9STRA4.060e-11953.91P-loop containing nucleoside triphosphate hydrolas... [more]
A0A5J4YBS8_9CHLO9.010e-11853.65DEAD box helicase n=1 Tax=Trebouxia sp. A1-2 TaxID... [more]
A0A0M0K3J2_9EUKA1.110e-11753.61Uncharacterized protein (Fragment) n=1 Tax=Chrysoc... [more]
A0A6H5L2V2_9PHAE2.010e-11754.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LUB6_ECTSI1.130e-11554.69DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A7S4D8Q7_HETAK2.490e-11453.49Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
R7QP73_CHOCR4.070e-11051.29Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0QEX6_9CRYP1.950e-10953.77Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig509contigP-wetherbeei_contig509:7087..9910 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FSF4
Preferred nameMSS116
PFAMsDEAD,Helicase_C
Model size1152
Max annot lvl2759|Eukaryota
KEGG koko:K17679
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000372,GO:0000373,GO:0000375,GO:0000376,GO:0000377,GO:0000959,GO:0000963,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003725,GO:0003727,GO:0003729,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005759,GO:0006139,GO:0006351,GO:0006354,GO:0006390,GO:0006392,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008026,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0008380,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010501,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0030554,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0033592,GO:0034337,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070035,GO:0071704,GO:0090304,GO:0090615,GO:0097159,GO:0097367,GO:0097617,GO:0097659,GO:0140053,GO:0140098,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576
Exons8
Evalue4.13e-127
EggNOG OGsCOG0513@1|root,KOG0342@2759|Eukaryota
EC3.6.4.13
Descriptionhelicase activity
Cds size1152
COG categoryJKL
BRITEko00000,ko01000,ko03029
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig509.6.1prot_P-wetherbeei_contig509.6.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig509 7087..9910 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186765.3776977-CDS-P-wetherbeei_contig509:7086..71611683186765.3776977-CDS-P-wetherbeei_contig509:7086..7161Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig509 7087..7161 +
1683186765.3920422-CDS-P-wetherbeei_contig509:7608..77251683186765.3920422-CDS-P-wetherbeei_contig509:7608..7725Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig509 7609..7725 +
1683186765.4033687-CDS-P-wetherbeei_contig509:7908..81481683186765.4033687-CDS-P-wetherbeei_contig509:7908..8148Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig509 7909..8148 +
1683186765.4165065-CDS-P-wetherbeei_contig509:8404..85181683186765.4165065-CDS-P-wetherbeei_contig509:8404..8518Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig509 8405..8518 +
1683186765.4254665-CDS-P-wetherbeei_contig509:8560..86701683186765.4254665-CDS-P-wetherbeei_contig509:8560..8670Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig509 8561..8670 +
1683186765.4335852-CDS-P-wetherbeei_contig509:8858..89431683186765.4335852-CDS-P-wetherbeei_contig509:8858..8943Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig509 8859..8943 +
1683186765.4413679-CDS-P-wetherbeei_contig509:9164..94431683186765.4413679-CDS-P-wetherbeei_contig509:9164..9443Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig509 9165..9443 +
1683186765.4495254-CDS-P-wetherbeei_contig509:9778..99101683186765.4495254-CDS-P-wetherbeei_contig509:9778..9910Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig509 9779..9910 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig509.6.1

>prot_P-wetherbeei_contig509.6.1 ID=prot_P-wetherbeei_contig509.6.1|Name=mRNA_P-wetherbeei_contig509.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=384bp
FSTLPISEETARAIREVLKYNNMTMVQELAMPVCLEGVDVLARAKTGTGK
TLAFLIPAIERAARARAAAGGSLDGTSCLVISPTRELAAQIAKEAELLAT
FHGKGRDRMTVDIAVGGACKPAADLKRFRGSPPVILVATPGRLLDHLENG
GLRPMFRDLDTLVLDEADRLLDMGFKRDVEKILSSEGGGAGGRQALMFSA
TLPDDVASVASSVLASGYRTIDCIGEQEDGTHAHVPQEYMVVPLEQQAAA
LMALLADLISAADGGNHKIIVFFAAARLVQLHAALAEALGLPVLETHSRK
SQAHRDRVSEEFRRGRNIIMFTSDVSARGLDYPDVTTVVQVGLPTDRAQY
IHRLGRTARAGKDGRGILLLADFERRFLKEVSDL
back to top

mRNA from alignment at P-wetherbeei_contig509:7087..9910+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig509.6.1 ID=mRNA_P-wetherbeei_contig509.6.1|Name=mRNA_P-wetherbeei_contig509.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2824bp|location=Sequence derived from alignment at P-wetherbeei_contig509:7087..9910+ (Phaeothamnion wetherbeei SAG_119_79)
TTCTCGACGCTGCCGATCAGCGAGGAGACGGCCCGGGCCATCCGTGAGGT TCTCAAGTACAATAACATGACCATGGTGAGCAGCGGCCTCGTTGTCCCTT GTCGCAACCGCGTGCGCCACTCTCTACGCTACGCGCCGGTGTTTCGACAG CTTGGCTGCCTGGGGTCACGGGATGTGTAATAACTGCACTGATCTTTTCC GTAGTCTTCTGTATTTACTTTCGAGCGAGGAGCTCCTGCTGTTGTCCACG ACTCCTTCGGTGGTATCCTTCCTACTTCACTCCCCGCCCGCCAGCCCTTC ATCTCCCAGCTAGGAAAGAAAATCCGAAAAATCCGAAAGATTATCCGCTT TGCGTCGGTACGGCACGCCCCACCTCGGCGGGCTGCAGGATTCGCCAGAT GTTATGCTCGCCGACGGAATGCGGTTCGCCGTATCTTCCACATTCTCACA AGCCGCCTATCGGTGATTAACTGGGTTCTTCCTATCCCCTCTATACCTCC TGTACCTCCTTTACTCGTTCAGGTGCAAGAGCTGGCGATGCCGGTGTGCC TGGAGGGTGTGGATGTGCTGGCGCGGGCCAAGACGGGCACCGGCAAGACG CTCGCCTTCCTCATTCCTGCCATAGAGCGGGCCGCCAGGGTAATGATGTG GCCTTGCGGTGTGGCGGCTGGCTGGCGCAGGCATTTCTCATTCCCTTTCA GGCTTTGACAAGGGAGCTGTGCATTTTTGCATCCTTCGGCTGTTCGGTTG CTGGAAGACCACCATCGGCCAAGCCTCTAATGCCCCCATGTCACCCCTCC CTCCCTTTCGTCCTCAAAACAGGCGCGCGCCGCCGCCGGCGGTTCGCTGG ACGGCACGAGCTGCCTCGTCATCAGTCCCACGCGGGAGCTCGCCGCGCAG ATCGCCAAGGAAGCCGAGCTCCTGGCGACGTTCCACGGGAAGGGACGGGA CCGCATGACGGTCGACATTGCCGTCGGCGGTGCCTGCAAGCCGGCGGCGG ACCTGAAGCGGTTCCGGGGCAGCCCGCCGGTCATATTGGTCGCCACGCCT GGCCGCCTCCTGGTGAGTCGGAGAGCGGGGGTTCTCTCTCTTTCTCTGCG GCCGTGTTTATGTTGCCAAGTGTGACGTGTATCCCCGGATTTTGTAGGAT ATCTCTCTTTTCGGAAGGGCAGGCTCGAAGCCGGTCTTCTCTATATGGGC AGTGAAGCAGCTGTATGCACCCTTATCTTTATACTCTAGTCTGCCGCTTC TCTGGTTTGTGTTGCTCTGCTTGTCTGTAGCCGGAGCGTAACCGCTGTAA CCGCTGCAACCCCGCCAGGATCACCTGGAGAACGGCGGGCTTCGGCCGAT GTTCCGCGACCTCGACACGCTCGTGCTGGATGAGGCCGACCGCCTCCTCG ACATGGGCTTCAAGCGCGACGTCGAGAAGATCGTCGCCCAGCTCCCGCCG CCGGGATCGGGGTCAGCGCGGCAGCTCAGTAGCGAAGGCGGCGGGGCTGG CGGGCGGCAAGCACTCATGTTCAGCGCGACACTGCCGGACGATGTGGCTT CTGTGGCATCGTCGGTTCTCGCATCCGGCTATAGGTGAGTTGCCGGTCTT GCCTGAACATTCTGCCTGAGGTATCTTCATCGCGTTCTCTTCTCGCTGTC GCGCTGTAGCGACGCCGAGTAGTGTCACTTGCTGGCGCCTCGCTCCTCGT TCGGCCACAAACCGCTGTCACCGCCGCCATTGTCATTTTCGTTTGACCCG ACCGCCTGCCGAAAATTTGTAGAACGATCGACTGCATCGGGGAGCAGGAG GACGGGACGCACGCCCACGTGCCGCAGGAGTACATGGTGGTGCCGCTCGA GCAGCAGGTGCGGCCAGTCGTCTCTTTCATCGTTGGTGTTTCCTGTATTC TGTCGACTTTCTCTTTGTCTCTTTTTCGCCTTCGTCCGGCTCGCTGTGGG AGCAAATTCCTTCTCTCCTCCCGTCTACCTTTTCCGAATCCGCCGATCGC CGCGATTTCACTACTCACCATTCACCATGCAACGGTGCACACAAATTTTT CTCGTCCTCGCACCATCCACCTTGCCAGGCGGCGGCCCTCATGGCGCTGC TGGCGGACCTCATCAGCGCCGCCGACGGCGGCAACCACAAGATCATCGTC TTCTTCGCGGCGGCGCGGCTAGTGCAGCTGCACGCGGCGCTGGCAGAGGC GCTCGGTTTGCCCGTGCTGGAGACGCACTCGCGCAAGTCGCAGGCGCACC GGGACCGCGTGTCAGAAGAATTCCGGCGCGGCAGAAACATCATCATGTTC ACCTCGGATGTGTCGGCGCGCGGGCTCGACTACCCCGACGTCACGACTGT TGTCCAGGTAAGAGAGAGTCCCTTGTGTCATTTCCCTTTTGCGCGAAACT TATTTTGGGTTAGCGGCTATGGCGAGGGTGGACTGCGGTAGCAATTACGG CATTGGGAGCGGCGCAGCGGCGATGAAACAGCAAACGCGGCGGCACAGGC TGCAAAGCGGCGGCAGAGACGGATCGCGGTAACGGCTGACGGCTGCGTGG GTCGTGTGCAGGGCTGCTGAGGTTGCCATGGGGGCAGCGGGGTGTGGCAT TTCACGCGCTTTCAACTTCCTCGGATGCTTACCTTGACCACCTGTGGCTG AGGACACTGCTTCCCTATGCTTCCCTCTTTCTCTGCAACCAGGTGGGCCT CCCGACGGACCGCGCACAGTACATCCACCGGCTCGGGCGGACGGCGCGCG CCGGCAAGGACGGCCGCGGCATCCTCCTTCTGGCCGACTTCGAGCGCAGG TTTCTGAAGGAAGTCTCGGACCTG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig509:7087..9910+

>mRNA_P-wetherbeei_contig509.6.1 ID=mRNA_P-wetherbeei_contig509.6.1|Name=mRNA_P-wetherbeei_contig509.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1152bp|location=Sequence derived from alignment at P-wetherbeei_contig509:7087..9910+ (Phaeothamnion wetherbeei SAG_119_79)
TTCTCGACGCTGCCGATCAGCGAGGAGACGGCCCGGGCCATCCGTGAGGT
TCTCAAGTACAATAACATGACCATGGTGCAAGAGCTGGCGATGCCGGTGT
GCCTGGAGGGTGTGGATGTGCTGGCGCGGGCCAAGACGGGCACCGGCAAG
ACGCTCGCCTTCCTCATTCCTGCCATAGAGCGGGCCGCCAGGGCGCGCGC
CGCCGCCGGCGGTTCGCTGGACGGCACGAGCTGCCTCGTCATCAGTCCCA
CGCGGGAGCTCGCCGCGCAGATCGCCAAGGAAGCCGAGCTCCTGGCGACG
TTCCACGGGAAGGGACGGGACCGCATGACGGTCGACATTGCCGTCGGCGG
TGCCTGCAAGCCGGCGGCGGACCTGAAGCGGTTCCGGGGCAGCCCGCCGG
TCATATTGGTCGCCACGCCTGGCCGCCTCCTGGATCACCTGGAGAACGGC
GGGCTTCGGCCGATGTTCCGCGACCTCGACACGCTCGTGCTGGATGAGGC
CGACCGCCTCCTCGACATGGGCTTCAAGCGCGACGTCGAGAAGATCCTCA
GTAGCGAAGGCGGCGGGGCTGGCGGGCGGCAAGCACTCATGTTCAGCGCG
ACACTGCCGGACGATGTGGCTTCTGTGGCATCGTCGGTTCTCGCATCCGG
CTATAGAACGATCGACTGCATCGGGGAGCAGGAGGACGGGACGCACGCCC
ACGTGCCGCAGGAGTACATGGTGGTGCCGCTCGAGCAGCAGGCGGCGGCC
CTCATGGCGCTGCTGGCGGACCTCATCAGCGCCGCCGACGGCGGCAACCA
CAAGATCATCGTCTTCTTCGCGGCGGCGCGGCTAGTGCAGCTGCACGCGG
CGCTGGCAGAGGCGCTCGGTTTGCCCGTGCTGGAGACGCACTCGCGCAAG
TCGCAGGCGCACCGGGACCGCGTGTCAGAAGAATTCCGGCGCGGCAGAAA
CATCATCATGTTCACCTCGGATGTGTCGGCGCGCGGGCTCGACTACCCCG
ACGTCACGACTGTTGTCCAGGTGGGCCTCCCGACGGACCGCGCACAGTAC
ATCCACCGGCTCGGGCGGACGGCGCGCGCCGGCAAGGACGGCCGCGGCAT
CCTCCTTCTGGCCGACTTCGAGCGCAGGTTTCTGAAGGAAGTCTCGGACC
TG
back to top