mRNA_P-wetherbeei_contig5.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5.2.1 vs. uniprot
Match: A0A836CLG1_9STRA (Complex1_LYR_dom domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLG1_9STRA) HSP 1 Score: 124 bits (312), Expect = 3.890e-34 Identity = 64/134 (47.76%), Postives = 89/134 (66.42%), Query Frame = 1
Query: 7 ILHVYKQLLAMSRRLPSEKEREAALRGVREGFRGNLGVQDQERVGTLLREAESRLGFLKIVTPGRGGRVDGGQTRIVYRGGKALEGAEARRRDRAAHANWSGSNLDPDAVTRHRQTLGRAGFMDHAQVMGPGGF 408
++ +Y+ LL +RRLP ER A + VREGF+ ++ QE++ LL +A+SRL +LKIVTP R R G ++VY+ GK +E + R RA +NW+GSN+DPD+V+RHR TL RAGF DH V+G GF
Sbjct: 1 VIRIYRHLLKSARRLPKPAERADAFQQVREGFKAHMHESSQEKLAQLLNQAQSRLSYLKIVTP-RDARNQEGAVKVVYQDGKLVEHVQTDR-PRAPISNWTGSNMDPDSVSRHRHTLSRAGFKDHGHVLGEHGF 132
BLAST of mRNA_P-wetherbeei_contig5.2.1 vs. uniprot
Match: A0A7S2S2D5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2D5_9STRA) HSP 1 Score: 115 bits (288), Expect = 2.200e-30 Identity = 61/131 (46.56%), Postives = 87/131 (66.41%), Query Frame = 1
Query: 7 ILHVYKQLLAMSRRLPSEKEREAALRGVREGFRGNLGVQDQERVGTLLREAESRLGFLKIVTPGRGGRVDGGQ-TRIVYRGGKALEGAEARRRDRAAHANWSGSNLDPDAVTRHRQTLGRAGFMDHAQVMG 396
+L +Y+QLL +S+ + K+R A+ VR+ FR + D+ER+ LL +AESRL FLK+VTP R+ G Q T VY+ GK L+ AR +DRA H+NW+GSN+DPD+V +H+ L RAGF D++ G
Sbjct: 9 VLPLYRQLLFLSQHISDVKKRPEAVALVRDAFREHRLETDEERIQQLLAQAESRLSFLKMVTPREYHRLGGQQSTYYVYQNGKRLDDGSARTQDRARHSNWTGSNMDPDSVAKHQHLLNRAGFQDNSHAKG 139
BLAST of mRNA_P-wetherbeei_contig5.2.1 vs. uniprot
Match: A0A2R5GRX5_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GRX5_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 2.640e-16 Identity = 55/122 (45.08%), Postives = 74/122 (60.66%), Query Frame = 1
Query: 10 LHVYKQLLAMSRRLPSEKEREAALRGVREGFRGNLGVQDQERVGTLLREAESRLGFLKIVTPGRGGRVDGGQTRIVYRGGKALEGAEARRRDRAAHANWSGSNLDPDAVTRHRQTLGRAGFM 375
L +YKQLL +RRLP E +R AA + VR+ F+ + E+V LL A+S+LG+LKIVTP R R G+ R+V R GK +EG+ AR DRA H S +D DA+ +H + R FM
Sbjct: 14 LALYKQLLQTARRLP-EAQRAAAAQEVRDKFKAHAAEGSPEKVQELLNLAQSKLGYLKIVTP-RTSRDATGKARLVLRDGKWVEGS-ARLMDRAPHDKTS---VDADALAKHNYLMERQHFM 129
BLAST of mRNA_P-wetherbeei_contig5.2.1 vs. uniprot
Match: A0A8J5X1X5_DIALT (Complex1_LYR_dom domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X1X5_DIALT) HSP 1 Score: 72.4 bits (176), Expect = 1.160e-13 Identity = 44/122 (36.07%), Postives = 69/122 (56.56%), Query Frame = 1
Query: 7 ILHVYKQLLAMSRRLPSEKEREAALRGVREGFRGNLGVQDQERVGTLLREAESRLGFLKIVTPGRGGRVDGGQTRIVYRGGKALEGAEARRRDRAAHANWSGSNLDPDAVTRHRQTLGRAGF 372
+L ++++L LP+E+ R AAL +R+GFR N+ D V L++ A S+L FL++VTP G + G V R G+ +G A A H+ + +N+DPDA+ RHR+ + R F
Sbjct: 5 VLSLFRRLWRRVGSLPAER-RAAALAELRQGFRANIHASDPVEVAKLVQRASSKLAFLRMVTPTPRGEMGAGTGIYVMRDGQLRQG-RADAVSAARHSAYDATNIDPDALARHRRLVERQHF 124
BLAST of mRNA_P-wetherbeei_contig5.2.1 vs. uniprot
Match: A0A7S2HLR1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HLR1_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 1.890e-13 Identity = 46/138 (33.33%), Postives = 81/138 (58.70%), Query Frame = 1
Query: 7 ILHVYKQLLAMSRRLPSEKEREAALRGVREGFRGNLGVQDQERVGTLLREAESRLGFLKIVTPGRGGRVDG----GQTRIVYRG-GKALE---GAEARRRDRAAHANWSGSNLDPDAVTRHRQTLGRAGFMDHAQVMG 396
+L Y+ L + RRLP+ ++ ++L+ +R+ ++ N V + + LL EA ++ +L+I+TP R D +TR VY G G+ ++ G + ++ + H+NWSG N+DP +V RH+Q L RAGF+++ G
Sbjct: 13 VLSTYRTLHKLIRRLPTPQQ-PSSLQQLRQTYKANATVPPSQ-IQPLLEEAGKKIAYLRIITPKDKWRGDSKSQSAETRWVYNGKGEKIQDGVGTPSHQKGKV-HSNWSGGNMDPCSVKRHKQQLSRAGFVNNLHAKG 147
BLAST of mRNA_P-wetherbeei_contig5.2.1 vs. uniprot
Match: A0A2D4BZA9_PYTIN (Complex1_LYR_dom domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZA9_PYTIN) HSP 1 Score: 71.6 bits (174), Expect = 2.850e-13 Identity = 41/121 (33.88%), Postives = 70/121 (57.85%), Query Frame = 1
Query: 16 VYKQLLAMSRRLPSEKEREAALRGVREGFRGNLGVQDQERVGTLLREAESRLGFLKIVTPGRGGRVDGGQTRIVYRGGKALEGAEARRRDRAAHANWSGSNLDPDAVTRHRQTLGRAGFMD 378
+YK+LL +++ +P +RE+ ++ +R FR +L D + + LL+ A+S++GFLKIVTP R D G+T IVY G+ ++G A + ++ + + + RH Q L R F+D
Sbjct: 14 IYKKLLRLAKSIPDVAKRESTVQQIRSEFRSHLDSSDPKEISALLQRAQSKIGFLKIVTPRA--RSDSGRTNIVYMKGERVDGDSVSEEG----ARYKTADFESN-LRRHNQLLRRQHFLD 127
BLAST of mRNA_P-wetherbeei_contig5.2.1 vs. uniprot
Match: A0A6U3XLZ3_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3XLZ3_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 9.040e-13 Identity = 45/132 (34.09%), Postives = 67/132 (50.76%), Query Frame = 1
Query: 7 ILHVYKQLLAMSRRLPSEKEREAALRGVREGFRGNLGVQDQERVGTLLREAESRLGFLKIVTPGRGGRVDGGQTRIVY--RGGKALEGAEARRRDRAAHANWSGSNLDPDAVTRHRQTLGRAGFMDHAQVMG 396
+L Y+ L + R LP ++ A L +R ++ N+ + L+ EA ++ +L+IVTP R +Y G K G RD A +NW+G NLDP +V RHRQ LGRAGF+++ G
Sbjct: 27 VLSTYRTLHKLIRNLPPTQQPNA-LTQLRTTYKSNVTAPTSS-IQPLIEEAGKKIAYLRIVTPKDRSTNQKSSERWIYDGNGNKVFNGIGQLNRDGKAVSNWNGKNLDPCSVKRHRQQLGRAGFVNNLHAKG 156
BLAST of mRNA_P-wetherbeei_contig5.2.1 vs. uniprot
Match: A0A8K1CBV4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBV4_PYTOL) HSP 1 Score: 67.4 bits (163), Expect = 1.210e-11 Identity = 41/121 (33.88%), Postives = 66/121 (54.55%), Query Frame = 1
Query: 16 VYKQLLAMSRRLPSEKEREAALRGVREGFRGNLGVQDQERVGTLLREAESRLGFLKIVTPGRGGRVDGGQTRIVYRGGKALEGAEARRRDRAAHANWSGSNLDPDAVTRHRQTLGRAGFMD 378
+YK+LL +++ LP +R+A + +R FR + V D + + L++ A+S++GFLKIVTP D G VY+ G +EG +A A + + D + + RH Q + R FMD
Sbjct: 13 LYKKLLKLAKSLPDAAKRDATMEQIRAEFRSHRDVTDPKEIAALVQRAQSKIGFLKIVTPRT--TADAGVKSYVYKNGARVEGEKAMEEG----ARYKTEDFDLN-MRRHTQLVRRQHFMD 126
BLAST of mRNA_P-wetherbeei_contig5.2.1 vs. uniprot
Match: A0A7S2S2D6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2D6_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 4.580e-11 Identity = 40/91 (43.96%), Postives = 57/91 (62.64%), Query Frame = 1
Query: 7 ILHVYKQLLAMSRRLPSEKEREAALRGVREGFRGNLGVQDQERVGTLLREAESRLGFLKIVTPGRGGRVDGGQ-TRIVYRGGKALEGAEAR 276
+L +Y+QLL +S+ + K+R A+ VR+ FR + D+ER+ LL +AESRL FLK+VTP R+ G Q T VY+ GK L+ AR
Sbjct: 9 VLPLYRQLLFLSQHISDVKKRPEAVALVRDAFREHRLETDEERIQQLLAQAESRLSFLKMVTPREYHRLGGQQSTYYVYQNGKRLDDGSAR 99
BLAST of mRNA_P-wetherbeei_contig5.2.1 vs. uniprot
Match: A0A485KVP4_9STRA (Aste57867_12466 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KVP4_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 4.710e-8 Identity = 40/121 (33.06%), Postives = 65/121 (53.72%), Query Frame = 1
Query: 19 YKQLLAMSRRLPSEKEREAALRGVREGFRGNLGVQDQERVGTLLREAESRLGFLKIVTPGRGGRVDGGQTRIVYRGGKALEGAEARRRDRAAHANWSGSNLDPDAVT-RHRQTLGRAGFMD 378
YK+L+ +++ LP +++ E L +R FR N G+ E + LL +A+S++ +LKIVTP R + R VY+ GK + + A+ +N + D DA+ RH + R FMD
Sbjct: 9 YKKLIKLAQSLPGDQKTET-LEKIRHDFRSNGGISSAEELDQLLMKAQSKISYLKIVTPKRTPQTS--PQRYVYKDGKRFDPNDMN----ASSSNATFQTTDVDAMMKRHVKLWRRQHFMD 122 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5.2.1 >prot_P-wetherbeei_contig5.2.1 ID=prot_P-wetherbeei_contig5.2.1|Name=mRNA_P-wetherbeei_contig5.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=137bp KHILHVYKQLLAMSRRLPSEKEREAALRGVREGFRGNLGVQDQERVGTLLback to top mRNA from alignment at P-wetherbeei_contig5:3143..3693+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5.2.1 ID=mRNA_P-wetherbeei_contig5.2.1|Name=mRNA_P-wetherbeei_contig5.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=551bp|location=Sequence derived from alignment at P-wetherbeei_contig5:3143..3693+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5:3143..3693+ >mRNA_P-wetherbeei_contig5.2.1 ID=mRNA_P-wetherbeei_contig5.2.1|Name=mRNA_P-wetherbeei_contig5.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=411bp|location=Sequence derived from alignment at P-wetherbeei_contig5:3143..3693+ (Phaeothamnion wetherbeei SAG_119_79)back to top |