mRNA_P-wetherbeei_contig5.10.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5.10.1 vs. uniprot
Match: A0A7S3XY04_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY04_HETAK) HSP 1 Score: 144 bits (364), Expect = 2.800e-42 Identity = 68/118 (57.63%), Postives = 86/118 (72.88%), Query Frame = 1
Query: 10 EVSVHTVAAMPGQTDALLVCARLNMAHLYSLTGQLLRSYSTGKAVGGDLVCARPSPRGKWVYACGEDGILYCFAAETGELDRTLTVTAPDMEVAGLAHHPHRNMLATFGAEGILKLWK 363
E +VHTV +PG D LV AR + A++ +L GQ+++++S+GKAVGGD A SP+GKWVY GEDG+LYCF TG+LD+ L V D EV GLAHHPHRN++ATF EG LKLWK
Sbjct: 15 ETAVHTVLPLPGAADHFLVAARSSTAYVCTLQGQVVKTFSSGKAVGGDFAAAAVSPQGKWVYCAGEDGVLYCFNVATGQLDQVLKVA--DKEVIGLAHHPHRNLVATFSDEGALKLWK 130
BLAST of mRNA_P-wetherbeei_contig5.10.1 vs. uniprot
Match: A0A1I8JG04_9PLAT (Uncharacterized protein n=3 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8JG04_9PLAT) HSP 1 Score: 136 bits (342), Expect = 2.230e-35 Identity = 57/121 (47.11%), Postives = 89/121 (73.55%), Query Frame = 1
Query: 1 AAAEVSVHTVAAMPGQTDALLVCARLNMAHLYSLTGQLLRSYSTGKAVGGDLVCARPSPRGKWVYACGEDGILYCFAAETGELDRTLTVTAPDMEVAGLAHHPHRNMLATFGAEGILKLWK 363
A AE+ V ++ +P D L+VC + N + ++ GQ++RS+S+GK GGD +CA SPRG+W+Y CGED LYCF+ ++G+L+RTL ++ + E+ G+AHHPH+N++AT+ +G+LKLWK
Sbjct: 392 AGAEIPVQSIHILPKTPDHLVVCNKTNSVVIINMQGQVVRSFSSGKREGGDFICATVSPRGEWIYCCGEDKTLYCFSVQSGKLERTLAIS--EREIIGVAHHPHQNLIATYSEDGLLKLWK 510
BLAST of mRNA_P-wetherbeei_contig5.10.1 vs. uniprot
Match: A0A7S2C2G0_9STRA (WD40 repeat-containing protein SMU1 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C2G0_9STRA) HSP 1 Score: 126 bits (316), Expect = 1.830e-34 Identity = 61/124 (49.19%), Postives = 82/124 (66.13%), Query Frame = 1
Query: 1 AAAEVSVHTVAAMPGQTDALLVCARLNMAHLYSLTGQLLRSYSTGKAVGGDLVCARPSPRGKWVYACGEDGILYCFA---AETGELDRTLTVTAPDMEVAGLAHHPHRNMLATFGAEGILKLWK 363
A AE S+HT+ MPG D L R + AH+ +L GQ++RS+S+GKA GGD VC SP+GKW Y GEDG +Y F +E +L+ + V D ++ G+ HHPHRN+LAT A+G+LKLWK
Sbjct: 50 ATAETSIHTLVPMPGTPDHFLAVNRTSTAHVVTLQGQVVRSFSSGKATGGDFVCGTVSPQGKWAYCAGEDGKVYVFDLSHSEGAQLEHIVKVA--DKDLIGICHHPHRNLLATHAADGMLKLWK 171
BLAST of mRNA_P-wetherbeei_contig5.10.1 vs. uniprot
Match: D7FX60_ECTSI (WD40 repeat-containing protein SMU1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX60_ECTSI) HSP 1 Score: 132 bits (332), Expect = 6.320e-34 Identity = 63/118 (53.39%), Postives = 85/118 (72.03%), Query Frame = 1
Query: 10 EVSVHTVAAMPGQTDALLVCARLNMAHLYSLTGQLLRSYSTGKAVGGDLVCARPSPRGKWVYACGEDGILYCFAAETGELDRTLTVTAPDMEVAGLAHHPHRNMLATFGAEGILKLWK 363
E SVHTV +PG + +LV R + A L +L GQ++RS+++ K+V D CA SP+G+WVY GEDG L+CF A T E+++TL V+ + E+ GLAHHPHRN+LATF EG+LKLWK
Sbjct: 400 EASVHTVRPLPGSAEQVLVSNRTSTAFLCTLQGQVVRSFTSPKSVRADFTCACLSPKGRWVYCAGEDGELFCFDAATTEVEKTLKVS--EKEIIGLAHHPHRNLLATFSNEGLLKLWK 515
BLAST of mRNA_P-wetherbeei_contig5.10.1 vs. uniprot
Match: A0A835ZIM7_9STRA (WD40 repeat-containing protein SMU1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIM7_9STRA) HSP 1 Score: 132 bits (332), Expect = 8.360e-34 Identity = 63/123 (51.22%), Postives = 85/123 (69.11%), Query Frame = 1
Query: 10 EVSVHTVAAMPGQTDALLVCARLNMAHLYSLTGQLLRSYS-----TGKAVGGDLVCARPSPRGKWVYACGEDGILYCFAAETGELDRTLTVTAPDMEVAGLAHHPHRNMLATFGAEGILKLWK 363
E +VHT+ MPG ++ LLV R A+L + G +++S+S TG GGD CA SPRG+WV+ +DG ++CF AETGE++RTL V A EV+G+ HHPHRN+LATFG +G+LKLWK
Sbjct: 425 EAAVHTIVPMPGSSEHLLVATRSTTAYLITQQGAVVKSFSLDASGTGAVAGGDFTCACASPRGRWVFVASDDGKVHCFNAETGEIERTLAVGAG--EVSGMTHHPHRNLLATFGKDGMLKLWK 545
BLAST of mRNA_P-wetherbeei_contig5.10.1 vs. uniprot
Match: A0A7J7JCL8_BUGNE (WD40 repeat-containing protein SMU1 n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7JCL8_BUGNE) HSP 1 Score: 130 bits (327), Expect = 2.490e-33 Identity = 59/120 (49.17%), Postives = 85/120 (70.83%), Query Frame = 1
Query: 4 AAEVSVHTVAAMPGQTDALLVCARLNMAHLYSLTGQLLRSYSTGKAVGGDLVCARPSPRGKWVYACGEDGILYCFAAETGELDRTLTVTAPDMEVAGLAHHPHRNMLATFGAEGILKLWK 363
AA+V VH+V +P D LVC R N + ++ GQ++RS++ GK GGD V A SPRG W Y GED +LYCF+A+TG+L+RTL+V +M+V G+ HHPH+N++ T+ +G+L+LWK
Sbjct: 372 AADVPVHSVHLLPRNQDQFLVCNRSNTISIMNMQGQIVRSFTNGKREGGDFVSATISPRGDWYYCLGEDLVLYCFSAKTGKLERTLSVH--EMDVIGICHHPHQNLIGTYSEDGLLRLWK 489
BLAST of mRNA_P-wetherbeei_contig5.10.1 vs. uniprot
Match: A0A0L8HTP8_OCTBM (WD40 repeat-containing protein SMU1 n=2 Tax=Octopus TaxID=6643 RepID=A0A0L8HTP8_OCTBM) HSP 1 Score: 130 bits (327), Expect = 3.160e-33 Identity = 57/118 (48.31%), Postives = 85/118 (72.03%), Query Frame = 1
Query: 10 EVSVHTVAAMPGQTDALLVCARLNMAHLYSLTGQLLRSYSTGKAVGGDLVCARPSPRGKWVYACGEDGILYCFAAETGELDRTLTVTAPDMEVAGLAHHPHRNMLATFGAEGILKLWK 363
+++VH+V + + +VC R N + +++GQ++RS+S+GK GGD VC SPRG+W+Y GED +LYCF+ TG+L+RTLTV D V G+AHHPH+N++AT+ +G+LKLWK
Sbjct: 397 DITVHSVHPLLRNMEQFVVCNRSNTVAIMNMSGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDRVLYCFSITTGKLERTLTVHEKD--VIGVAHHPHQNLIATYSEDGLLKLWK 512
BLAST of mRNA_P-wetherbeei_contig5.10.1 vs. uniprot
Match: UPI001C53D85A (pre-mRNA-splicing factor SLU7-like n=2 Tax=Dipodomys spectabilis TaxID=105255 RepID=UPI001C53D85A) HSP 1 Score: 128 bits (322), Expect = 5.040e-32 Identity = 57/121 (47.11%), Postives = 84/121 (69.42%), Query Frame = 1
Query: 1 AAAEVSVHTVAAMPGQTDALLVCARLNMAHLYSLTGQLLRSYSTGKAVGGDLVCARPSPRGKWVYACGEDGILYCFAAETGELDRTLTVTAPDMEVAGLAHHPHRNMLATFGAEGILKLWK 363
A +++V+ V +P + +VC R N + ++ GQ++RS+S+GK GGD VC SPRG+W+Y GED +LYCF TG+L+RTLTV D V G+AHHPH+N++ T+ A+G++KLWK
Sbjct: 850 AGTDITVNNVILLPKNPEHFVVCNRSNTVVIMNIQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFNTVTGKLERTLTVHEKD--VIGIAHHPHQNLIVTYSADGLVKLWK 968
BLAST of mRNA_P-wetherbeei_contig5.10.1 vs. uniprot
Match: A0A1B0D7E2_PHLPP (WD40 repeat-containing protein SMU1 n=1 Tax=Phlebotomus papatasi TaxID=29031 RepID=A0A1B0D7E2_PHLPP) HSP 1 Score: 127 bits (318), Expect = 1.750e-31 Identity = 57/118 (48.31%), Postives = 83/118 (70.34%), Query Frame = 1
Query: 10 EVSVHTVAAMPGQTDALLVCARLNMAHLYSLTGQLLRSYSTGKAVGGDLVCARPSPRGKWVYACGEDGILYCFAAETGELDRTLTVTAPDMEVAGLAHHPHRNMLATFGAEGILKLWK 363
E++VHTV +P + +VC R N L ++ GQ +RS+S+GK GG +CA SPRG+++Y GED +LYCF+ +G+L+RTL V D + GL HHPH+N+LA++G +G+LKLWK
Sbjct: 864 ELAVHTVLILPKNPEHFIVCNRSNTVVLMNMQGQTVRSFSSGKREGGAFICATISPRGEYIYCAGEDLVLYCFSITSGKLERTLNVHEKD--IIGLTHHPHQNLLASYGEDGVLKLWK 979
BLAST of mRNA_P-wetherbeei_contig5.10.1 vs. uniprot
Match: A0A7S2WMN1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WMN1_9STRA) HSP 1 Score: 120 bits (300), Expect = 4.390e-31 Identity = 59/122 (48.36%), Postives = 81/122 (66.39%), Query Frame = 1
Query: 7 AEVSVHTVAAMPGQTDALLVCARLNMAHLYSLTGQLLRSYSTGKAVGGDLVCARPSPRGKWVYACGEDGILYCFAA---ETGELDRTLTVTAPDMEVAGLAHHPHRNMLATFGAEGILKLWK 363
AE +VH++ +P Q D L R + A++ +L GQ++RS+S+GK GGD VC SPRGKWVY EDG YCF E +L++T VT EV G+AHHPHRN++ATF +G+L+LW+
Sbjct: 137 AERAVHSLLPLPAQPDLFLAVPRSSTAYVVNLQGQVVRSFSSGKKEGGDFVCCTMSPRGKWVYCGAEDGNAYCFDLGHDEAVQLEQTFQVTEKK-EVLGMAHHPHRNIVATFAQDGLLRLWR 257 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5.10.1 >prot_P-wetherbeei_contig5.10.1 ID=prot_P-wetherbeei_contig5.10.1|Name=mRNA_P-wetherbeei_contig5.10.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=123bp AAAEVSVHTVAAMPGQTDALLVCARLNMAHLYSLTGQLLRSYSTGKAVGGback to top mRNA from alignment at P-wetherbeei_contig5:29033..29401- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5.10.1 ID=mRNA_P-wetherbeei_contig5.10.1|Name=mRNA_P-wetherbeei_contig5.10.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=369bp|location=Sequence derived from alignment at P-wetherbeei_contig5:29033..29401- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5:29033..29401- >mRNA_P-wetherbeei_contig5.10.1 ID=mRNA_P-wetherbeei_contig5.10.1|Name=mRNA_P-wetherbeei_contig5.10.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=369bp|location=Sequence derived from alignment at P-wetherbeei_contig5:29033..29401- (Phaeothamnion wetherbeei SAG_119_79)back to top |