mRNA_P-wetherbeei_contig21473.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig21473.1.1 vs. uniprot
Match: A0A4P5SLF5_9ACTN (SBP_bac_5 domain-containing protein n=3 Tax=Actinobacteria TaxID=201174 RepID=A0A4P5SLF5_9ACTN) HSP 1 Score: 148 bits (373), Expect = 1.670e-39 Identity = 68/115 (59.13%), Postives = 89/115 (77.39%), Query Frame = 1
Query: 22 MTITYNINPDAVWDDGSPITVADFECTWRANLNTPGTLSTIGWENITSVDEGESDKQAVVRLSKVYAPYRSLFGALIKQDAVDDCDDVTEDFAVDIPFSGRAWKLASWSQTKQIF 366
MTITY+INP AVW+DGSPIT ADF TW A+LNTPG++ST G++ +T+VD G SDKQ VV + VYAP+R LFGALIK +V + DV+ D+A +IPFSGR +K+ SWS + ++
Sbjct: 70 MTITYDINPAAVWEDGSPITAADFAATWEASLNTPGSISTSGYDQVTAVDAGTSDKQVVVTMKAVYAPWRGLFGALIKAASVKNTKDVSADYADNIPFSGRPYKIKSWSPDQVVY 184
BLAST of mRNA_P-wetherbeei_contig21473.1.1 vs. uniprot
Match: A0A6I3EFK3_9ACTN (SBP_bac_5 domain-containing protein n=5 Tax=root TaxID=1 RepID=A0A6I3EFK3_9ACTN) HSP 1 Score: 147 bits (372), Expect = 2.220e-39 Identity = 71/120 (59.17%), Postives = 90/120 (75.00%), Query Frame = 1
Query: 7 SNASAMTITYNINPDAVWDDGSPITVADFECTWRANLNTPGTLSTIGWENITSVDEGESDKQAVVRLSKVYAPYRSLFGALIKQDAVDDCDDVTEDFAVDIPFSGRAWKLASWSQTKQIF 366
+N MTITY+INP AVWDDGS ITVADF+ TW A+LNTPG++ST G++ +T V+ G SDKQAVV L VYAP+R LF LIK AV + DV+ DFA +IPFSGR +K+ SWS + ++
Sbjct: 61 ANVGGMTITYDINPAAVWDDGSQITVADFKATWEASLNTPGSISTSGYDLVTGVEAGSSDKQAVVTLKAVYAPWRGLFSGLIKAAAVKNTMDVSGDFADNIPFSGRPYKIQSWSPDQIVY 180
BLAST of mRNA_P-wetherbeei_contig21473.1.1 vs. uniprot
Match: A0A4P5R0S9_9ACTN (Peptide ABC transporter substrate-binding protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A4P5R0S9_9ACTN) HSP 1 Score: 145 bits (367), Expect = 1.190e-38 Identity = 64/118 (54.24%), Postives = 88/118 (74.58%), Query Frame = 1
Query: 13 ASAMTITYNINPDAVWDDGSPITVADFECTWRANLNTPGTLSTIGWENITSVDEGESDKQAVVRLSKVYAPYRSLFGALIKQDAVDDCDDVTEDFAVDIPFSGRAWKLASWSQTKQIF 366
++ MT+TY+I P+AVW+DGS ITVADF+ TW A LNTPG++ST+G++ I SV+ G SDKQ VV VY PY+ LFG LIK AV++ D++ DFA + FSGR WK+ SWS ++ ++
Sbjct: 67 SAGMTVTYDIAPEAVWEDGSAITVADFKATWEAALNTPGSISTVGYDQIDSVEAGSSDKQVVVNFKSVYGPYKGLFGGLIKASAVENTSDISADFADFLSFSGRPWKMKSWSPSQVVY 184
BLAST of mRNA_P-wetherbeei_contig21473.1.1 vs. uniprot
Match: A0A0R2QRF0_9ACTN (SBP_bac_5 domain-containing protein n=5 Tax=root TaxID=1 RepID=A0A0R2QRF0_9ACTN) HSP 1 Score: 145 bits (366), Expect = 1.600e-38 Identity = 68/122 (55.74%), Postives = 93/122 (76.23%), Query Frame = 1
Query: 1 PQSNASAMTITYNINPDAVWDDGSPITVADFECTWRANLNTPGTLSTIGWENITSVDEGESDKQAVVRLSKVYAPYRSLFGALIKQDAVDDCDDVTEDFAVDIPFSGRAWKLASWSQTKQIF 366
P + + MTITY+I P+AVW+DGSPITVADF+ T+ A+LNTPG++ST G++ I++VD G SDKQ VV L VYAP+R LFG LIK +V + DV+ DFA +PFSGR +K+ SWS+ + ++
Sbjct: 60 PAATGNGMTITYDIAPEAVWEDGSPITVADFQATYDASLNTPGSISTSGYDQISTVDAGTSDKQVVVTLKSVYAPWRGLFGGLIKAASVSNTADVSGDFADILPFSGRPYKMQSWSKDQLVY 181
BLAST of mRNA_P-wetherbeei_contig21473.1.1 vs. uniprot
Match: A0A3D0HIF4_9ACTN (SBP_bac_5 domain-containing protein (Fragment) n=1 Tax=Acidimicrobium sp. TaxID=1872112 RepID=A0A3D0HIF4_9ACTN) HSP 1 Score: 144 bits (364), Expect = 2.270e-38 Identity = 67/115 (58.26%), Postives = 88/115 (76.52%), Query Frame = 1
Query: 22 MTITYNINPDAVWDDGSPITVADFECTWRANLNTPGTLSTIGWENITSVDEGESDKQAVVRLSKVYAPYRSLFGALIKQDAVDDCDDVTEDFAVDIPFSGRAWKLASWSQTKQIF 366
MTITY+INPDAVWDDGSPIT DF TW A LNTPG++ST G++ +T+V+ G SDKQ VV LS VYAP+R+L L+K +V++ D++ DFA +IPFSGR +K+ SWS + +F
Sbjct: 70 MTITYDINPDAVWDDGSPITAVDFAATWDAALNTPGSISTPGYDQVTAVEAGASDKQVVVTLSSVYAPWRTLLMRLLKAASVENTKDISADFADNIPFSGRPYKIKSWSPDQIVF 184
BLAST of mRNA_P-wetherbeei_contig21473.1.1 vs. uniprot
Match: A0A6L6CRI4_9ACTN (SBP_bac_5 domain-containing protein n=5 Tax=root TaxID=1 RepID=A0A6L6CRI4_9ACTN) HSP 1 Score: 143 bits (360), Expect = 1.100e-37 Identity = 65/122 (53.28%), Postives = 92/122 (75.41%), Query Frame = 1
Query: 1 PQSNASAMTITYNINPDAVWDDGSPITVADFECTWRANLNTPGTLSTIGWENITSVDEGESDKQAVVRLSKVYAPYRSLFGALIKQDAVDDCDDVTEDFAVDIPFSGRAWKLASWSQTKQIF 366
P++ ++ M ITY+I P+AVW+DG+PITVADF TW A+LNTPG++ST G++ +T+V+ G SDKQ VV L VYAPY+ LF LIK AV++ D++ DFA IP+SGR +K+ SWS + ++
Sbjct: 56 PETASAGMKITYDIAPEAVWEDGTPITVADFAATWDASLNTPGSISTSGYDQVTAVEAGTSDKQVVVTLKSVYAPYKGLFSGLIKAAAVENTADISGDFADMIPYSGRPYKMESWSPDQIVY 177
BLAST of mRNA_P-wetherbeei_contig21473.1.1 vs. uniprot
Match: A0A0R2PX93_9ACTN (SBP_bac_5 domain-containing protein (Fragment) n=1 Tax=Acidimicrobium sp. BACL17 MAG-120823-bin42 TaxID=1655575 RepID=A0A0R2PX93_9ACTN) HSP 1 Score: 142 bits (359), Expect = 1.990e-37 Identity = 65/117 (55.56%), Postives = 88/117 (75.21%), Query Frame = 1
Query: 16 SAMTITYNINPDAVWDDGSPITVADFECTWRANLNTPGTLSTIGWENITSVDEGESDKQAVVRLSKVYAPYRSLFGALIKQDAVDDCDDVTEDFAVDIPFSGRAWKLASWSQTKQIF 366
+ MTI+Y I P+AVW+DGS IT DF+ TW A LNTPG+LST G++ + SV+ G SDKQ VV L VYAPY+ LF +LIK D+V+D D+++DF IPFSGRA+K+ SW++ + +F
Sbjct: 93 TGMTISYEIAPEAVWEDGSHITADDFKATWDATLNTPGSLSTSGYDQVISVEAGRSDKQVVVTLKSVYAPYKILFSSLIKADSVEDTSDISQDFLDLIPFSGRAYKMESWNKERLVF 209
BLAST of mRNA_P-wetherbeei_contig21473.1.1 vs. uniprot
Match: A0A7K1B1J8_9ACTN (SBP_bac_5 domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A7K1B1J8_9ACTN) HSP 1 Score: 142 bits (357), Expect = 4.040e-37 Identity = 66/117 (56.41%), Postives = 89/117 (76.07%), Query Frame = 1
Query: 16 SAMTITYNINPDAVWDDGSPITVADFECTWRANLNTPGTLSTIGWENITSVDEGESDKQAVVRLSKVYAPYRSLFGALIKQDAVDDCDDVTEDFAVDIPFSGRAWKLASWSQTKQIF 366
+AMT+T ++ +AVW+DGSPITVADF+CT ANLNTPG++ST+G++ I SV+ GESDKQ VV S VYAP+++LFGALIK AV+DC D++ DF SGR + + SWS + +F
Sbjct: 96 AAMTVTIDLAEEAVWEDGSPITVADFQCTLDANLNTPGSISTVGYDQIISVEAGESDKQVVVNFSTVYAPFKTLFGALIKAAAVEDCSDISTDFQDINETSGRPYIMESWSPEQSVF 212
BLAST of mRNA_P-wetherbeei_contig21473.1.1 vs. uniprot
Match: A0A7V8X3Q9_9ACTN (SBP_bac_5 domain-containing protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V8X3Q9_9ACTN) HSP 1 Score: 139 bits (350), Expect = 2.510e-36 Identity = 64/115 (55.65%), Postives = 81/115 (70.43%), Query Frame = 1
Query: 19 AMTITYNINPDAVWDDGSPITVADFECTWRANLNTPGTLSTIGWENITSVDEGESDKQAVVRLSKVYAPYRSLFGALIKQDAVDDCDDVTEDFAVDIPFSGRAWKLASWSQTKQI 363
AMT+TY +NPDAVW+DGSPI ADF+CT A LNTPG+LST G++ I V EGE + VV VYAPYR+LF +IK AV DC+D++ DF ++P SGR W L SW+ + I
Sbjct: 45 AMTVTYTLNPDAVWEDGSPIGEADFQCTLDATLNTPGSLSTTGYDQILDVAEGEDPQTVVVTFGTVYAPYRNLFSPIIKAAAVADCNDISADFTEELPISGRPWLLESWTTDQAI 159
BLAST of mRNA_P-wetherbeei_contig21473.1.1 vs. uniprot
Match: A0A2E0RQ79_9ACTN (SBP_bac_5 domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0RQ79_9ACTN) HSP 1 Score: 139 bits (351), Expect = 3.120e-36 Identity = 66/119 (55.46%), Postives = 83/119 (69.75%), Query Frame = 1
Query: 7 SNASAMTITYNINPDAVWDDGSPITVADFECTWRANLNTPGTLSTIGWENITSVDEGESDKQAVVRLSKVYAPYRSLFGALIKQDAVDDCDDVTEDFAVDIPFSGRAWKLASWSQTKQI 363
S +AMT+T ++NPDAVW+DGSPITVAD ECTW ANLNTP +L+T GW+ I SV GESD QAVV S VYAPY+ LF +++ DC+DV+ DF P S R +K WS ++ I
Sbjct: 99 SGDAAMTVTIDLNPDAVWEDGSPITVADLECTWMANLNTPASLNTTGWDQILSVATGESDTQAVVSFSTVYAPYKGLFDRILQASRHADCNDVSLDFEDAPPSSARPYKFQEWSTSQSI 217 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21473.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig21473.1.1 >prot_P-wetherbeei_contig21473.1.1 ID=prot_P-wetherbeei_contig21473.1.1|Name=mRNA_P-wetherbeei_contig21473.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=115bp MTITYNINPDAVWDDGSPITVADFECTWRANLNTPGTLSTIGWENITSVDback to top mRNA from alignment at P-wetherbeei_contig21473:800..1165+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig21473.1.1 ID=mRNA_P-wetherbeei_contig21473.1.1|Name=mRNA_P-wetherbeei_contig21473.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=366bp|location=Sequence derived from alignment at P-wetherbeei_contig21473:800..1165+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig21473:800..1165+ >mRNA_P-wetherbeei_contig21473.1.1 ID=mRNA_P-wetherbeei_contig21473.1.1|Name=mRNA_P-wetherbeei_contig21473.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=345bp|location=Sequence derived from alignment at P-wetherbeei_contig21473:800..1165+ (Phaeothamnion wetherbeei SAG_119_79)back to top |