mRNA_P-wetherbeei_contig21455.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig21455.1.1
Unique NamemRNA_P-wetherbeei_contig21455.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig21455.1.1 vs. uniprot
Match: A0A847ZW17_9HYPH (Uncharacterized protein n=1 Tax=Phyllobacteriaceae bacterium TaxID=1871068 RepID=A0A847ZW17_9HYPH)

HSP 1 Score: 378 bits (970), Expect = 6.520e-124
Identity = 181/299 (60.54%), Postives = 219/299 (73.24%), Query Frame = 1
Query:   37 LATATPLEAQTLNTTDFQIEWKVTNRFRLFNDAGFFKLHENAWRQYLIHVKEQQIPDSQKSLLINSASVLGSEHVLNDRYIAFSRLERTKFDWRGWAALGQGRLCWNPKSRQHDLCGDVDGYVNPKAHEIEISLRPLVKNALITEYNCEWRVGGAPVQTAPCDGAVTALLPYPNGADISVAVVGEQPITLKAKVRDLLIVGMGDSFASGEGNPDMPAEFSEAQRFKNLYPRRKNNDASGSAQWTDELCHRSLYGHQLRAALQIAIENPQSAVTFLGYACSGAGIEAGILGPQEYVESVS 933
            L T+T   AQTL T++ QI W+V NRFRLF +AG F+ HE AW+QYLIHV    +P+  K  L  ++SV+G+EHVLNDRYI F+R  RT++DWRGWAA   G LCW+  +R H  CG  + YV PK+H ++I L    + AL  EYNCEWRV G   +TAPCD  V   +P+P GA  SV   GEQPI+   +V+DLLI G+GDSFASGEGNPD+P  FS   R +NLYPRR  NDA GSAQW DE+CHRSLYGHQLRAALQIA+ENPQSAVTFLGYACSGA +  GI+GPQE+V+ VS
Sbjct:    3 LVTSTA-SAQTLTTSNVQINWQVENRFRLFRNAGDFQAHERAWQQYLIHVNNLGLPEEDKQRLAANSSVIGTEHVLNDRYIPFTRHLRTRYDWRGWAAKTVGDLCWDAATRSHAACGGSEAYVVPKSHRVKIWLTSRDRAALFAEYNCEWRVNGGAAETAPCDEPVNLDIPWPAGASASVNAEGEQPISTDVQVKDLLIAGLGDSFASGEGNPDVPVTFSAEARHRNLYPRRARNDAGGSAQWMDEICHRSLYGHQLRAALQIAVENPQSAVTFLGYACSGAAVNEGIIGPQEHVDYVS 300          
BLAST of mRNA_P-wetherbeei_contig21455.1.1 vs. uniprot
Match: A0A3N5GXH0_9HYPH (Uncharacterized protein (Fragment) n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3N5GXH0_9HYPH)

HSP 1 Score: 374 bits (959), Expect = 6.780e-124
Identity = 188/313 (60.06%), Postives = 220/313 (70.29%), Query Frame = 1
Query:   25 ALFCLATATPL-------EAQTLNTTDFQIEWKVTNRFRLFNDAGFFKLHENAWRQYLIHVKEQQIPDSQKSLLINSASVLGSEHVLNDRYIAFSRLERTKFDWRGWAALGQGRLCWNPKSRQHDLCGDVDGYVNPKAHEIEISLRPLVKNALITEYNCEWRVGGAPVQTAPCDGAVT---ALLPYPNGADISVAVVGEQPITLKAKVRDLLIVGMGDSFASGEGNPDMPAEFSEAQRFKNLYPRRKNNDASGSAQWTDELCHRSLYGHQLRAALQIAIENPQSAVTFLGYACSGAGIEAGILGPQEYVESVS 933
            ALFC+ +A  L        AQTLN +DF+IEWKV NRFRLF D GFF LHENAWRQYL+H     +   Q++  +   SVLGSEHVLNDR IAFS + R  FDWRGWAA  +  LC++ KSR H  CGD+D Y+NP  HEIE+ +      AL     CEWR+GG  V    C   V    A+LPYP GA+ISV V GE PI + A+VRDLLI G+GDSFASGEGNP+ P  FS+ +R +NLYP RK N  +GSA WTDELCHRSLYGHQLRAALQIAIENP+++VTFL Y+CSGAG E GILGPQ YV  VS
Sbjct:    6 ALFCMISALLLCLLAPDSRAQTLNASDFRIEWKVVNRFRLFADPGFFSLHENAWRQYLLHTDGLDMDADQRAAFVARTSVLGSEHVLNDRRIAFSDVLRKNFDWRGWAARSEAVLCYDSKSRTHTACGDIDAYLNPTGHEIEMWITTASGVALPAGQECEWRIGGTLVAVEDCAERVRDPRAVLPYPGGAEISVNVAGESPILVDAQVRDLLIAGLGDSFASGEGNPNTPVAFSDVRRHRNLYPERKTNSVAGSATWTDELCHRSLYGHQLRAALQIAIENPKTSVTFLDYSCSGAGGEDGILGPQVYVSRVS 318          
BLAST of mRNA_P-wetherbeei_contig21455.1.1 vs. uniprot
Match: A0A2W2BND1_9HYPH (Uncharacterized protein n=2 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=A0A2W2BND1_9HYPH)

HSP 1 Score: 370 bits (949), Expect = 1.160e-120
Identity = 185/316 (58.54%), Postives = 223/316 (70.57%), Query Frame = 1
Query:    1 LRVLYFVFALFCLATATPLEAQTLNTTDFQIEWKVTNRFRLFNDAGFFKLHENAWRQYLIHVKEQQIPDSQKSLLINSASVLGSEHVLNDRYIAFSRLERTKFDWRGWAALGQGRLCWNPKSRQHDLCGDVDGYVNPKAHEIEISLRPLVKNALITEYNCEWRVGGAPVQTAPCDGAVTA---LLPYPNGADISVAVVGEQPITLKAKVRDLLIVGMGDSFASGEGNPDMPAEFSEAQRFKNLYPRRKNNDASGSAQWTDELCHRSLYGHQLRAALQIAIENPQSAVTFLGYACSGAGIEAGILGPQEYVESVSTT 939
            + +L FVFAL       P EAQTL+T+ F+IEW+VTNRFRLF D  FF+ HENAWRQYL+HV +Q +   ++   +   SVLGSEHVLNDRYIAFS + R  FDWRGWAA G   LC++ + R H  CG +D YV P++H IE+ L      A      CEWR+GG  V    C   V+     LPYP GA+ISV VVGE PI   A+V+DLLI G+GDSFASGEGNP+ P  FS+ +RF+N YP R+ NDA G A+WTDELCHRSLYG QLRAALQIAIENPQS+VTFL Y+CSGA I  GILGPQ YVE +++T
Sbjct:    1 MAILLFVFAL-------PAEAQTLSTSQFRIEWQVTNRFRLFQDPMFFRQHENAWRQYLLHVDQQGMASDERDSFVARTSVLGSEHVLNDRYIAFSNILRKNFDWRGWAAKGHDGLCYDGRKRSHSACGGIDAYVMPQSHAIEMWLSGQNVPAAAV---CEWRIGGQLVAQTSCSDRVSGEGVALPYPGGAEISVNVVGEAPIITAARVKDLLIAGLGDSFASGEGNPNRPVAFSDTRRFRNFYPLRRQNDAGGGAEWTDELCHRSLYGQQLRAALQIAIENPQSSVTFLDYSCSGASIADGILGPQTYVERLAST 306          
BLAST of mRNA_P-wetherbeei_contig21455.1.1 vs. uniprot
Match: UPI001995DA12 (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=UPI001995DA12)

HSP 1 Score: 368 bits (945), Expect = 5.470e-120
Identity = 172/297 (57.91%), Postives = 219/297 (73.74%), Query Frame = 1
Query:   61 AQTLNTTDFQIEWKVTNRFRLFNDAGFFKLHENAWRQYLIHVKEQQIPDSQKSLLINSASVLGSEHVLNDRYIAFSRLERTKFDWRGWAALGQGRLCWNPKSRQHDLCGDVDGYVNPKAHEIEISLRPLVKNALITEYNCEWRVGGAPVQTAPCDGAVTALLPYPNGADISVAVVGEQPITLKAKVRDLLIVGMGDSFASGEGNPDMPAEFSEAQRFKNLYPRRKNNDASGSAQWTDELCHRSLYGHQLRAALQIAIENPQSAVTFLGYACSGAGIEAGILGPQEYVESVSTTSAAS 951
            AQTL++++F IEW+V NRFRLF D  FFKLHENAWR+YL H    ++ +  ++  +N  SVLGSEHVLNDR +AFS   R +FDWRGWAA  +G+LC++P++R+H  CG +D Y+NPK+HEIE+ L  +   AL     CEWR+GG PV TA C   V+A + YP  ++ISV  VGEQPI + A VRD+LI  +GDSFASGEGNP+ PAEF +  R++NLYP RK+N   GSA WTD+LCHRSLYG  LRAALQ+A+E+ Q A+TFL Y+CSGAGI+ GILG Q YVE  + T  AS
Sbjct:   21 AQTLDSSNFTIEWQVVNRFRLFRDPAFFKLHENAWREYLFHANRLKLSEDGRADYVNRTSVLGSEHVLNDRRVAFSDTPRKEFDWRGWAASSEGKLCYDPETRRHSACGSIDDYLNPKSHEIELWLEAVGGIALPATAQCEWRIGGQPVATAGCGERVSATIAYPGSSEISVNAVGEQPIAVSAAVRDILIASLGDSFASGEGNPNRPAEFGDGSRYRNLYPLRKDNHVGGSAVWTDQLCHRSLYGQNLRAALQLAVESRQIAITFLDYSCSGAGIDEGILGGQYYVEREAATEIAS 317          
BLAST of mRNA_P-wetherbeei_contig21455.1.1 vs. uniprot
Match: UPI0018C79D69 (hypothetical protein n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=UPI0018C79D69)

HSP 1 Score: 335 bits (859), Expect = 4.380e-107
Identity = 160/306 (52.29%), Postives = 205/306 (66.99%), Query Frame = 1
Query:   10 LYFVFALFCLATATPLEAQTLNTTDFQIEWKVTNRFRLFNDAGFFKLHENAWRQYLIHVKEQQIPDSQKSLLINSASVLGSEHVLNDRYIAFSRLERTKFDWRGWAALGQGRLCWNPKSRQHDLCGDVDGYVNPKAHEIEISLRPLVKN-ALITEYNCEWRVGGAPVQTAPCDGAVTALLPYPNGADISVAVVGEQPITLKAKVRDLLIVGMGDSFASGEGNPDMPAEFSEAQRFKNLYPRRKNNDASGSAQWTDELCHRSLYGHQLRAALQIAIENPQSAVTFLGYACSGAGIEAGILGPQEYVE 924
            L+  F L        + A+ L     QI WKV+NRFR F D   FK  E AW +Y +HV  +        +   ++SVLG EH+LNDR I F+++ RTKFDWRGWAA      C++PKSR H  CG VD Y+NP  H+IEISL+ L    AL  +Y C W++G APVQ A CD  +   +PYP+GA ISV V  E+PI++  KV+DLL+VG+GDSFASGEGNPD+P +  E  R +N+YP   + D +GSA+W D+ CHRSLY +QLRAALQ+A+ENP  AVT+LGYACSGA I+ GI+GPQ YVE
Sbjct:    5 LFLSFFLILCCMPQGIAAEVLGAGTVQIVWKVSNRFRFFKDEADFKKQEQAWSEYGMHVAAKDGSVEDNDMFYYNSSVLGIEHMLNDRRIPFTKILRTKFDWRGWAAKTVDDTCYDPKSRTHAACGGVDAYINPTGHDIEISLKSLTSGPALFKQYTCHWQIGDAPVQDANCDETIRTSIPYPDGATISVNVDNERPISIDVKVKDLLVVGLGDSFASGEGNPDVPVQMDETHRVQNMYPAVASRDVTGSARWLDQACHRSLYSYQLRAALQMALENPHGAVTYLGYACSGAAIDKGIIGPQTYVE 310          
BLAST of mRNA_P-wetherbeei_contig21455.1.1 vs. uniprot
Match: A0A849TGG4_9HYPH (SGNH_hydro domain-containing protein n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A849TGG4_9HYPH)

HSP 1 Score: 182 bits (461), Expect = 8.080e-49
Identity = 116/306 (37.91%), Postives = 157/306 (51.31%), Query Frame = 1
Query:   37 LATATPLEAQTLNTTDFQIEWKVTNRFRLFNDAGFFKLHENAWRQYLIHVKEQQIPDSQKSLLINSASVLGSEHVLNDRYIAFSRLERTKFDWRGWAALGQGRLCWNPKSRQHDLCGDVDGYVNPKAHEIEISLRPLVKNALITEYNCEWRV------GGAPVQTAPCDGAVTALLPYPNGADISVAVVGEQPITLKAKVRDLLIVGMGDSFASGEGNPDMPAEFSEAQ------RFKNL----YPRR-----KNNDAS---GSAQWTDELCHRSLYGHQLRAALQIAIENPQSAVTFLGYACSGA 882
            LA   PL   T    + QI+W+V N FR F D    ++H   +         + + D ++      A VL +E  L++R+              GWA+   G  CWN +  QH  C DV  Y+NPK+H+I   +R L +   +   +C WR       G     T PC+ AV   +PYP GA + V V G++    +A V+DL IVG GDSF SGEGNPD+P  FS  +      R K +    YP R     K  D      +A+W D+ CHRSLY HQLRAALQ+++E PQ AVT++G ACSGA
Sbjct:   20 LAVIAPL---TRAVAEPQIQWRVANSFRFFLDPADTEVHRATY---------EALSDDERK-----APVLSAERALSERHA------------EGWASTMLGNTCWNAQQNQH-RCPDVGSYINPKSHKIRAEVRELPEGETV---DCVWRTTPLSGRGSGGTVTVPCNVAVELEVPYPAGARVVVEVGGQKVAATEAVVQDLFIVGFGDSFGSGEGNPDVPVRFSRERGADYGLRTKEVALAGYPARVGAWEKIGDQKFIDENARWLDQACHRSLYSHQLRAALQLSVEAPQRAVTYVGLACSGA 292          
BLAST of mRNA_P-wetherbeei_contig21455.1.1 vs. uniprot
Match: A0A2W4MSF8_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4MSF8_9PROT)

HSP 1 Score: 181 bits (460), Expect = 1.270e-48
Identity = 118/308 (38.31%), Postives = 157/308 (50.97%), Query Frame = 1
Query:   61 AQTLNTTDF---QIEWKVTNRFRLFNDAGFFKLHENAWRQYLIHVKEQQIPDSQKSLLINSASVLGSEHVLNDRYIAFSRLERTKFDWRGWAALGQGRLCWNPKSRQHDLCGDVDGYVNPKAHEIEISLRPLVKNALITEYNCEWRVG----GAPVQTA---PCDGAVTALLPYPNGADISVAVVGEQPITLKAKVRDLLIVGMGDSFASGEGNPDMPAEFSEAQRFKNL----------YPRR--------KNNDASGSAQWTDELCHRSLYGHQLRAALQIAIENPQSAVTFLGYACSGAGIEAGI 900
            AQT  TT     +IEW+V N FR F D    ++H N +                        S+   EH   D  +  +  E ++    GWA++  GR CW+ K   H   G VD Y+NPK+H I   L+ +   A +   NCEW        AP   A   PC+  V   +PYP+GA I+V + G +     A+V+DL IVGMGDSFASGEGNPD+P  FS  +R  N           YP R               +A+W D+ CHRSLY HQLRAALQ+++E+P  AVTF+G+ACSGA I +G+
Sbjct:   26 AQTFETTTVIHPEIEWRVQNPFRFFVDPTDTEMHRNTF-----------------------LSLSDEEH---DEPVLSAERELSRQHQDGWASIILGRTCWDNKRNLHICPGGVD-YINPKSHTIIAELKGIPDAAFV---NCEWLTAPKGRNAPRGQALLRPCNEPVELEIPYPDGARITVEIGGREVAATDARVKDLFIVGMGDSFASGEGNPDLPVRFSR-ERSVNYGVGFGTDLVGYPARIGQWREIGDERFVQENARWLDQACHRSLYSHQLRAALQLSLEDPHRAVTFVGFACSGAEITSGL 302          
BLAST of mRNA_P-wetherbeei_contig21455.1.1 vs. uniprot
Match: A0A7C4TW82_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TW82_9HYPH)

HSP 1 Score: 181 bits (458), Expect = 2.300e-48
Identity = 119/292 (40.75%), Postives = 153/292 (52.40%), Query Frame = 1
Query:   91 IEWKVTNRFRLFNDAGFFKLHENAWRQYLIHVKEQQIPDSQKSLLINSASVLGSEHVLNDRYIAFSRLERTKFDWRGWAALGQGRLCWNPKSRQHDLCGDVDGYVNPKAHEIEISLRPLVKNALITEYNCEWRV---GGAPVQTA----PCDGAVTALLPYPNGADISVAVVGEQPITLKAKVRDLLIVGMGDSFASGEGNPDMPAEFSEAQRFKNL-------YPRRKN-----NDA---SGSAQWTDELCHRSLYGHQLRAALQIAIENPQSAVTFLGYACSGAGIEAGI 900
            I W+V N FR F D    +LH   +    +  +++Q P            VL +E  L+ R+              GWA+  +G  CW+P    H +C D   Y+ P  H I   L  L    L+   +C W V   G AP ++A    PCD   +  LPYP GA ISV + G +     A+V DLL+VGMGDSFASGEGNPD+P  FS  QR  +        YP R        DA   +G+A+W D+ CHRSLY HQ+RAALQ+AIENP  AVTF+G ACSGA I AG+
Sbjct:   44 IAWRVENPFRFFVDPADTELHRTTFAS--LSPQQKQSP------------VLAAEQDLSRRHPD------------GWASAMKGPTCWDPMHNLH-VCPDAAPYIFPDQHRIAAELADLPDAGLV---DCTWLVTPPGNAPSRSAALTQPCDRIASLALPYPQGAVISVEIGGREIARTMARVSDLLVVGMGDSFASGEGNPDVPVRFSR-QRSADYDSSTLVGYPARVGAWRAIGDAEFIAGNARWLDQACHRSLYSHQMRAALQLAIENPHRAVTFVGVACSGAEIVAGL 304          
BLAST of mRNA_P-wetherbeei_contig21455.1.1 vs. uniprot
Match: A0A2W4R566_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4R566_9PROT)

HSP 1 Score: 172 bits (436), Expect = 2.960e-45
Identity = 109/294 (37.07%), Postives = 147/294 (50.00%), Query Frame = 1
Query:   91 IEWKVTNRFRLFNDAGFFKLHENAWRQYLIHVKEQQIPDSQKSLLINSASVLGSEHVLNDRYIAFSRLERTKFDWRGWAALGQGRLCWNPKSRQHDLCGDVDGYVNPKAHEIEISLRPLVKNALITEYNCEWRVG----GAP---VQTAPCDGAVTALLPYPNGADISVAVVGEQPITLKAKVRDLLIVGMGDSFASGEGNPDMPAEFSEAQRFK---------NLYPRRKNN--------DASGSAQWTDELCHRSLYGHQLRAALQIAIENPQSAVTFLGYACSGAGIEAGI 900
            IEW+V N FR F D    + H    R   + + +++          + + VL +E  L  RY              GWA++  GR CW     +H +C D   Y+NPK+H I   L+ +   + +   +C W       GAP     T PC+  V   +PYPNGA I+V + G +     A V DL IVG+GDSFASGEGNPD+P  FS  +              YP R  N            +A+W D+ CHRSLY HQLRAALQ+++E+P  AVTF+G ACSGA I  G+
Sbjct:   33 IEWRVENPFRFFIDPTDTEAH----RTIFLSLSDEE----------HDSPVLSAERKLGSRY------------QDGWASIVLGRTCWRADKSRH-ICPDGGDYINPKSHRIVAELKGIPDASFV---DCTWLTAPKGIGAPRGQAVTQPCNEPVLLDVPYPNGARITVEIGGREVAATDATVTDLFIVGIGDSFASGEGNPDLPIRFSRERSVSYGAGLMTELTGYPARVGNWREIGDERFIQENARWLDQACHRSLYSHQLRAALQLSLEDPHRAVTFVGVACSGAEITDGL 296          
BLAST of mRNA_P-wetherbeei_contig21455.1.1 vs. uniprot
Match: UPI000932052E (hypothetical protein n=1 Tax=Hyphomicrobium sp. CS1BSMeth3 TaxID=1892844 RepID=UPI000932052E)

HSP 1 Score: 167 bits (424), Expect = 1.290e-43
Identity = 108/296 (36.49%), Postives = 152/296 (51.35%), Query Frame = 1
Query:   88 QIEWKVTNRFRLFNDAGFFKLHENAWRQYLIHVKEQQIPDSQKSLLINSASVLGSEHVLNDRYIAFSRLERTKFDWRGWAALGQGRLCWNPKSRQHDLCGDVDGYVNPKAHEIEISLRPLVKNALITEYNCEW------RVGGAPVQTAPCDGAVTALLPYPNGADISVAVVGEQPITLKAKVRDLLIVGMGDSFASGEGNPDMPAEFSEAQRFK----------------NLYPRRKNNDAS---GSAQWTDELCHRSLYGHQLRAALQIAIENPQSAVTFLGYACSGAGIEAGI 900
            +I W+V N FRLF      ++H   +         Q + +++++       VL +E  L  R+              GWAA     LCW+ +  ++  C +   Y++P+AH + ++LR +     I   +C W      R G     TA CD  VT  +PYP GA ++V + G +     AKV DLL+V MGDSFASGEGNPD+P  FS  +R                   + P R   D++    +A+W D+ CHRSLY HQLRAALQ+AIE+P  AVTF+GYACSGA I  G+
Sbjct:   29 RITWRVENPFRLFTRPSDTEVHRATY---------QDLGEAERT-----TPVLAAERALARRHPG-----------DGWAAGMMDHLCWSTERNRYG-CRNATDYLHPRAHRVLLTLRDVPDADRI---DCTWLTAPLARGGLGGSVTARCDEPVTLSVPYPAGARVTVEIGGREIAATNAKVNDLLVVAMGDSFASGEGNPDVPVRFSRERRADYGSVGFGGEPLAGYPARVGPWRSIGDSAFIKNNARWIDQACHRSLYSHQLRAALQLAIEDPHRAVTFIGYACSGAEIVDGL 295          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21455.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A847ZW17_9HYPH6.520e-12460.54Uncharacterized protein n=1 Tax=Phyllobacteriaceae... [more]
A0A3N5GXH0_9HYPH6.780e-12460.06Uncharacterized protein (Fragment) n=1 Tax=Hyphomi... [more]
A0A2W2BND1_9HYPH1.160e-12058.54Uncharacterized protein n=2 Tax=Aestuariivirga lit... [more]
UPI001995DA125.470e-12057.91Uncharacterized protein n=1 Tax=Hyphomicrobiales b... [more]
UPI0018C79D694.380e-10752.29hypothetical protein n=1 Tax=Aestuariivirga litora... [more]
A0A849TGG4_9HYPH8.080e-4937.91SGNH_hydro domain-containing protein n=1 Tax=Hypho... [more]
A0A2W4MSF8_9PROT1.270e-4838.31Uncharacterized protein n=1 Tax=Proteobacteria bac... [more]
A0A7C4TW82_9HYPH2.300e-4840.75Uncharacterized protein n=1 Tax=Hyphomicrobiales b... [more]
A0A2W4R566_9PROT2.960e-4537.07Uncharacterized protein n=1 Tax=Proteobacteria bac... [more]
UPI000932052E1.290e-4336.49hypothetical protein n=1 Tax=Hyphomicrobium sp. CS... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig21455contigP-wetherbeei_contig21455:180..1136 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1267005.KB911260_gene3445
Preferred nameMA20_08245
Model size957
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue4.57e-42
EggNOG OGs2A2JU@1|root,30QXU@2|Bacteria,1N7N4@1224|Proteobacteria,2TTU2@28211|Alphaproteobacteria
Cds size957
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186226.2435043-CDS-P-wetherbeei_contig21455:179..11361683186226.2435043-CDS-P-wetherbeei_contig21455:179..1136Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig21455 180..1136 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig21455.1.1prot_P-wetherbeei_contig21455.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig21455 180..1136 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig21455.1.1

>prot_P-wetherbeei_contig21455.1.1 ID=prot_P-wetherbeei_contig21455.1.1|Name=mRNA_P-wetherbeei_contig21455.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=319bp
LRVLYFVFALFCLATATPLEAQTLNTTDFQIEWKVTNRFRLFNDAGFFKL
HENAWRQYLIHVKEQQIPDSQKSLLINSASVLGSEHVLNDRYIAFSRLER
TKFDWRGWAALGQGRLCWNPKSRQHDLCGDVDGYVNPKAHEIEISLRPLV
KNALITEYNCEWRVGGAPVQTAPCDGAVTALLPYPNGADISVAVVGEQPI
TLKAKVRDLLIVGMGDSFASGEGNPDMPAEFSEAQRFKNLYPRRKNNDAS
GSAQWTDELCHRSLYGHQLRAALQIAIENPQSAVTFLGYACSGAGIEAGI
LGPQEYVESVSTTSAASSD
back to top

mRNA from alignment at P-wetherbeei_contig21455:180..1136+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig21455.1.1 ID=mRNA_P-wetherbeei_contig21455.1.1|Name=mRNA_P-wetherbeei_contig21455.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=957bp|location=Sequence derived from alignment at P-wetherbeei_contig21455:180..1136+ (Phaeothamnion wetherbeei SAG_119_79)
TTGCGGGTCTTATATTTTGTTTTTGCGCTCTTCTGCTTGGCCACGGCCAC ACCGCTGGAAGCCCAAACCCTCAACACCACGGATTTTCAGATCGAGTGGA AGGTAACCAACCGCTTTCGGCTTTTCAATGATGCGGGCTTCTTCAAGCTC CATGAAAATGCCTGGCGGCAATATCTCATCCATGTGAAAGAACAGCAGAT CCCTGACAGCCAAAAATCCCTTCTTATCAACAGCGCCTCGGTGCTGGGCA GCGAGCATGTGCTGAACGACCGCTACATCGCCTTCTCGCGGCTCGAGCGC ACGAAATTTGACTGGCGCGGCTGGGCAGCGCTTGGCCAGGGCAGGCTGTG CTGGAATCCAAAATCCCGCCAGCATGATCTCTGCGGCGATGTCGATGGCT ATGTCAATCCGAAGGCCCACGAAATTGAAATCAGCCTCCGCCCCCTCGTG AAGAATGCCCTGATCACCGAATATAATTGTGAGTGGCGCGTCGGTGGTGC GCCGGTTCAGACAGCACCCTGCGATGGCGCCGTCACGGCCCTGCTGCCCT ATCCCAATGGCGCCGACATTTCCGTGGCCGTGGTGGGCGAACAGCCCATC ACCCTGAAGGCAAAAGTGCGCGATCTGCTGATCGTCGGCATGGGCGACAG CTTTGCCTCCGGCGAAGGCAACCCCGACATGCCCGCCGAGTTCAGCGAAG CCCAGCGCTTTAAAAATCTTTATCCCCGGCGCAAGAACAATGATGCCAGC GGTTCCGCCCAATGGACCGACGAGCTTTGCCACCGCTCGCTCTATGGCCA CCAATTGCGCGCCGCCCTGCAAATCGCCATTGAGAACCCCCAGTCGGCGG TAACGTTTCTGGGCTACGCCTGTTCCGGCGCCGGCATCGAAGCGGGCATT CTGGGCCCTCAGGAATATGTCGAGAGTGTCAGCACAACCAGTGCGGCTTC ATCGGAC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig21455:180..1136+

>mRNA_P-wetherbeei_contig21455.1.1 ID=mRNA_P-wetherbeei_contig21455.1.1|Name=mRNA_P-wetherbeei_contig21455.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=957bp|location=Sequence derived from alignment at P-wetherbeei_contig21455:180..1136+ (Phaeothamnion wetherbeei SAG_119_79)
TTGCGGGTCTTATATTTTGTTTTTGCGCTCTTCTGCTTGGCCACGGCCAC
ACCGCTGGAAGCCCAAACCCTCAACACCACGGATTTTCAGATCGAGTGGA
AGGTAACCAACCGCTTTCGGCTTTTCAATGATGCGGGCTTCTTCAAGCTC
CATGAAAATGCCTGGCGGCAATATCTCATCCATGTGAAAGAACAGCAGAT
CCCTGACAGCCAAAAATCCCTTCTTATCAACAGCGCCTCGGTGCTGGGCA
GCGAGCATGTGCTGAACGACCGCTACATCGCCTTCTCGCGGCTCGAGCGC
ACGAAATTTGACTGGCGCGGCTGGGCAGCGCTTGGCCAGGGCAGGCTGTG
CTGGAATCCAAAATCCCGCCAGCATGATCTCTGCGGCGATGTCGATGGCT
ATGTCAATCCGAAGGCCCACGAAATTGAAATCAGCCTCCGCCCCCTCGTG
AAGAATGCCCTGATCACCGAATATAATTGTGAGTGGCGCGTCGGTGGTGC
GCCGGTTCAGACAGCACCCTGCGATGGCGCCGTCACGGCCCTGCTGCCCT
ATCCCAATGGCGCCGACATTTCCGTGGCCGTGGTGGGCGAACAGCCCATC
ACCCTGAAGGCAAAAGTGCGCGATCTGCTGATCGTCGGCATGGGCGACAG
CTTTGCCTCCGGCGAAGGCAACCCCGACATGCCCGCCGAGTTCAGCGAAG
CCCAGCGCTTTAAAAATCTTTATCCCCGGCGCAAGAACAATGATGCCAGC
GGTTCCGCCCAATGGACCGACGAGCTTTGCCACCGCTCGCTCTATGGCCA
CCAATTGCGCGCCGCCCTGCAAATCGCCATTGAGAACCCCCAGTCGGCGG
TAACGTTTCTGGGCTACGCCTGTTCCGGCGCCGGCATCGAAGCGGGCATT
CTGGGCCCTCAGGAATATGTCGAGAGTGTCAGCACAACCAGTGCGGCTTC
ATCGGAC
back to top