mRNA_P-wetherbeei_contig21374.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig21374.1.1 vs. uniprot
Match: A0A3C0NFZ0_9CYAN (Uncharacterized protein n=2 Tax=unclassified Cyanobacteria TaxID=1983111 RepID=A0A3C0NFZ0_9CYAN) HSP 1 Score: 148 bits (373), Expect = 3.800e-38 Identity = 73/159 (45.91%), Postives = 100/159 (62.89%), Query Frame = 1
Query: 1 QGDITAAFGNLTRITAAALGVDRASIWMFDPEHDTLSCTDLFCASMNEHSAGQSIKVVEHPAYFSSLLNEEYIAADDAMNDGRLKAFKESYLKPLGIGSVLDVPILHGGRVQGVLCLEHIGAPITWTAEQRLFGTAIANFASLALERQERAKAEEDLRE 477
QGD+ AA +T TA + V+R S+W+FD L C +LF S+N HS G + ++P+YF +L+ E+ + AD+A D + F ESYL PLGI S+LD PI G+ GV+CLEH+G WT E + F ++AN SLALE QER +AE+ LRE
Sbjct: 194 QGDLNAAIETITEATAHNIAVERVSVWLFDKTGTLLKCLNLFERSLNRHSQGVELVTADYPSYFQALIQEQLLVADEAHTDPKTSEFSESYLTPLGISSMLDAPIRLKGQTVGVVCLEHVGDSRYWTPEDQNFARSVANLVSLALEAQERKRAEDALRE 352
BLAST of mRNA_P-wetherbeei_contig21374.1.1 vs. uniprot
Match: A0A533YGU2_9BACT (Response regulator n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A533YGU2_9BACT) HSP 1 Score: 145 bits (365), Expect = 2.990e-37 Identity = 72/157 (45.86%), Postives = 98/157 (62.42%), Query Frame = 1
Query: 7 DITAAFGNLTRITAAALGVDRASIWMFDPEHDTLSCTDLFCASMNEHSAGQSIKVVEHPAYFSSLLNEEYIAADDAMNDGRLKAFKESYLKPLGIGSVLDVPILHGGRVQGVLCLEHIGAPITWTAEQRLFGTAIANFASLALERQERAKAEEDLRE 477
D+ AA G +T + A L +R SIW + H +SC +L+ S + HS+G +KV ++PAYF +L E IAADDA D R F + YL+PLGI S++DVPI G + GVLC EHIGA W ++++F A AN SL + + ER +AEE LRE
Sbjct: 26 DLAAALGRMTEVVARTLKTERVSIWRYSDAHSAISCVELYELSAHRHSSGMELKVQDYPAYFKALAASEVIAADDAHQDARTCEFSKRYLRPLGITSMMDVPIYVAGMLDGVLCHEHIGAGRQWRPDEQMFAVAAANLISLVMGQWERRRAEEALRE 182
BLAST of mRNA_P-wetherbeei_contig21374.1.1 vs. uniprot
Match: A0A351L8W8_9CYAN (Urea ABC transporter substrate-binding protein n=1 Tax=Cyanobacteria bacterium UBA11371 TaxID=2055770 RepID=A0A351L8W8_9CYAN) HSP 1 Score: 145 bits (366), Expect = 3.260e-37 Identity = 74/159 (46.54%), Postives = 99/159 (62.26%), Query Frame = 1
Query: 1 QGDITAAFGNLTRITAAALGVDRASIWMFDPEHDTLSCTDLFCASMNEHSAGQSIKVVEHPAYFSSLLNEEYIAADDAMNDGRLKAFKESYLKPLGIGSVLDVPILHGGRVQGVLCLEHIGAPITWTAEQRLFGTAIANFASLALERQERAKAEEDLRE 477
QGD+ AA +T +A +GV+RAS+W+ D + C DLF S N+HS G I ++PAYF +L +E IAA++A D R F SYL PLGI S+LD+PI G+ GV+CLEHIG P WTAE + F ++A+ SLA E ER + E LR+
Sbjct: 436 QGDLKAALKEITEASAVNIGVERASVWLLDETKAKIKCLDLFEKSSNQHSEGAEIAAADYPAYFQALQQDEAIAAENASTDPRTVEFAPSYLIPLGIASMLDIPIRLRGQTAGVICLEHIGVPRHWTAEDQNFARSLADLVSLAFEATERKQTEAALRQ 594
BLAST of mRNA_P-wetherbeei_contig21374.1.1 vs. uniprot
Match: D8PBG3_9BACT (Putative Hybrid histidine kinase n=3 Tax=Nitrospira TaxID=1234 RepID=D8PBG3_9BACT) HSP 1 Score: 145 bits (366), Expect = 3.470e-37 Identity = 76/158 (48.10%), Postives = 100/158 (63.29%), Query Frame = 1
Query: 1 QGDITAAFGNLTRITAAALGVDRASIWMFDPEHDTLSCTDLFCASMNEHSAGQSIKVVEHPAYFSSLLNEEYIAADDAMNDGRLKAFKESYLKPLGIGSVLDVPILHGGRVQGVLCLEHIGAPITWTAEQRLFGTAIANFASLALERQERAKAEEDLR 474
G + A +TR TA LGV R SIW+ +HD++ C DL+ +S + HS+G I+ P YF +LL+E I A DA +D R + F SYL+PLGIG++LD+PI G++ GVLC EHIG P W E++ FG AIA+ SLALE ER AE LR
Sbjct: 229 SGVLEPALQEITRATAITLGVSRTSIWLLSEDHDSIRCKDLYESSKHSHSSGIDIQSAHFPEYFRALLSERVIDAADAKSDPRTREFTASYLEPLGIGAMLDIPIRFKGKLVGVLCNEHIGPPRPWMLEEQQFGHAIASLVSLALEAVERLHAEGALR 386
BLAST of mRNA_P-wetherbeei_contig21374.1.1 vs. uniprot
Match: UPI00155676AF (GAF domain-containing protein n=1 Tax=Microcoleus asticus TaxID=2815231 RepID=UPI00155676AF) HSP 1 Score: 144 bits (363), Expect = 8.770e-37 Identity = 65/158 (41.14%), Postives = 103/158 (65.19%), Query Frame = 1
Query: 1 QGDITAAFGNLTRITAAALGVDRASIWMFDPEHDTLSCTDLFCASMNEHSAGQSIKVVEHPAYFSSLLNEEYIAADDAMNDGRLKAFKESYLKPLGIGSVLDVPILHGGRVQGVLCLEHIGAPITWTAEQRLFGTAIANFASLALERQERAKAEEDLR 474
+G+++ A +T++ L V+R S+W + + C DL+ + N+HS G +KV ++P+YF +L E+ IAA DA D R + F+ESYL PL I S+LD+PI H GR+ GV+CLEH+G P WT +++ F + +A +LA+E ++R +AE +LR
Sbjct: 213 EGNLSEALREMTQMATRTLNVERGSVWFYKENKSAMCCADLYELTANQHSGGAELKVADYPSYFQALKTEQAIAAVDAKTDPRTQEFRESYLIPLNISSMLDIPITHQGRIAGVICLEHLGTPRKWTLDEQSFASYLAQMTALAMEARDRKQAELNLR 370
BLAST of mRNA_P-wetherbeei_contig21374.1.1 vs. uniprot
Match: A0A1L6I3P2_9BURK (Histidine kinase n=2 Tax=Paraburkholderia TaxID=1822464 RepID=A0A1L6I3P2_9BURK) HSP 1 Score: 143 bits (361), Expect = 1.440e-36 Identity = 71/154 (46.10%), Postives = 97/154 (62.99%), Query Frame = 1
Query: 31 LTRITAAALGVDRASIWMFDPEHDTLSCTDLFCASMNEHSAGQSIKVVEHPAYFSSLLNEEYIAADDAMNDGRLKAFKESYLKPLGIGSVLDVPILHGGRVQGVLCLEHIGAPITWTAEQRLFGTAIANFASLALERQERAKAEEDLREANRSV 492
+T A + V RAS+W +D + C DL+ S N HS G ++ +PAYF++L + E I ADDA D R F SYL PLG+ ++LD+PI G V GVLCLE IG P+ WT E RLFG A+AN +LA+ER ER +AE+ LR++ + +
Sbjct: 49 ITETAARLMSVARASLWRYDSARTAIHCLDLYECSTNRHSDGAQLRAQSYPAYFAALASSEAIVADDAHRDPRTCEFGTSYLTPLGVTAMLDIPIRVQGNVDGVLCLEQIGPPLAWTTEDRLFGIALANLIALAVERHERERAEKALRQSEQRM 202
BLAST of mRNA_P-wetherbeei_contig21374.1.1 vs. uniprot
Match: UPI0016880C46 (PAS domain S-box protein n=1 Tax=Microcoleus sp. FACHB-68 TaxID=2692826 RepID=UPI0016880C46) HSP 1 Score: 143 bits (361), Expect = 1.700e-36 Identity = 70/155 (45.16%), Postives = 98/155 (63.23%), Query Frame = 1
Query: 4 GDITAAFGNLTRITAAALGVDRASIWMFDPEHDTLSCTDLFCASMNEHSAGQSIKVVEHPAYFSSLLNEEYIAADDAMNDGRLKAFKESYLKPLGIGSVLDVPILHGGRVQGVLCLEHIGAPITWTAEQRLFGTAIANFASLALERQERAKAEED 468
GD+ AA +T+I A L ++R S+W ++ +H ++C DL+ + N+HS+G + + P YF ++ + IAADDA D R + F E YLKPLGI S+LDVPI GGR GVLC EHIG W E++ F +A ASLA+E ER +AEE+
Sbjct: 870 GDLEAALQEITQIAAQTLELERVSVWFYNDDHSKINCADLYELTQNQHSSGLELAATDFPNYFQAIKADRTIAADDAHTDPRTQEFSECYLKPLGIASMLDVPIRMGGRTVGVLCHEHIGTARRWALEEQNFANYLAYMASLAMEAGERKRAEEE 1024
BLAST of mRNA_P-wetherbeei_contig21374.1.1 vs. uniprot
Match: K9VLE6_9CYAN (Adenylate/guanylate cyclase with GAF and PAS/PAC sensors n=1 Tax=Oscillatoria nigro-viridis PCC 7112 TaxID=179408 RepID=K9VLE6_9CYAN) HSP 1 Score: 143 bits (360), Expect = 2.170e-36 Identity = 69/160 (43.12%), Postives = 100/160 (62.50%), Query Frame = 1
Query: 1 QGDITAAFGNLTRITAAALGVDRASIWMFDPEHDTLSCTDLFCASMNEHSAGQSIKVVEHPAYFSSLLNEEYIAADDAMNDGRLKAFKESYLKPLGIGSVLDVPILHGGRVQGVLCLEHIGAPITWTAEQRLFGTAIANFASLALERQERAKAEEDLREA 480
QGD+T A +T + L V R+S+W++D + C DLF ++N+HS G + ++P YF +L E IAA DA D R + F ESYL P GI S+LD PI GG GV+CLEH+G P +WT E++ F ++A+ + A+E ++R +AEE LR+A
Sbjct: 493 QGDLTKALQEITETASRTLEVARSSVWLYDRTKSKIECLDLFDRTLNQHSHGLELAAADYPVYFQALREERAIAAFDAQKDFRTREFAESYLIPFGITSMLDTPIQIGGETAGVICLEHVGTPRSWTIEEQSFAVSLADSVTFAVEARQRQRAEEALRQA 652
BLAST of mRNA_P-wetherbeei_contig21374.1.1 vs. uniprot
Match: A0A2T1FCT6_9CYAN (Histidine kinase n=2 Tax=unclassified Cyanobacteria TaxID=1983111 RepID=A0A2T1FCT6_9CYAN) HSP 1 Score: 143 bits (360), Expect = 2.220e-36 Identity = 69/158 (43.67%), Postives = 101/158 (63.92%), Query Frame = 1
Query: 1 QGDITAAFGNLTRITAAALGVDRASIWMFDPEHDTLSCTDLFCASMNEHSAGQSIKVVEHPAYFSSLLNEEYIAADDAMNDGRLKAFKESYLKPLGIGSVLDVPILHGGRVQGVLCLEHIGAPITWTAEQRLFGTAIANFASLALERQERAKAEEDLR 474
G+I A +T++ L VDRASIW + + + C DL+ + N+HSAG +KV ++P+YF +L E+ +AA DA D R F ESYL PL I S+LDVPI H G++ GV+CLEH G WT +++ F + +A A+LA+E ++R +AE +LR
Sbjct: 214 DGNIGEALREITQMATRTLNVDRASIWFYQEDKSAMCCADLYELTPNQHSAGAELKVADYPSYFQALNTEQVLAAVDAKTDPRTLEFSESYLMPLNISSMLDVPITHKGQIAGVICLEHQGTTRNWTLDEQSFASYVAQIAALAMEARDRKQAELNLR 371
BLAST of mRNA_P-wetherbeei_contig21374.1.1 vs. uniprot
Match: Q3M458_TRIV2 (Multi-sensor hybrid histidine kinase n=7 Tax=Nostocaceae TaxID=1162 RepID=Q3M458_TRIV2) HSP 1 Score: 142 bits (359), Expect = 3.110e-36 Identity = 71/154 (46.10%), Postives = 96/154 (62.34%), Query Frame = 1
Query: 1 QGDITAAFGNLTRITAAALGVDRASIWMFDPEHDTLSCTDLFCASMNEHSAGQSIKVVEHPAYFSSLLNEEYIAADDAMNDGRLKAFKESYLKPLGIGSVLDVPILHGGRVQGVLCLEHIGAPITWTAEQRLFGTAIANFASLALERQERAKAE 462
QG++ A +T + A LG++RASIW++D + C DLF S N+HSAG S+ ++P YF +L +E IAADDA D R K F +SYL PL I ++LD PI G GVLCLE + +P WT E + F ++ N SLALE +ER +AE
Sbjct: 230 QGNLKTALAEITNVAAHNLGIERASIWLYDETLTKIQCADLFEYSRNQHSAGMSLSAKDYPTYFQALHQDEAIAADDAYTDPRTKEFAQSYLTPLNITAMLDTPIRLAGETVGVLCLEAVKSPHHWTPEDQNFARSLTNLVSLALEARERQRAE 383 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21374.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig21374.1.1 >prot_P-wetherbeei_contig21374.1.1 ID=prot_P-wetherbeei_contig21374.1.1|Name=mRNA_P-wetherbeei_contig21374.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=169bp QGDITAAFGNLTRITAAALGVDRASIWMFDPEHDTLSCTDLFCASMNEHSback to top mRNA from alignment at P-wetherbeei_contig21374:186..692- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig21374.1.1 ID=mRNA_P-wetherbeei_contig21374.1.1|Name=mRNA_P-wetherbeei_contig21374.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig21374:186..692- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig21374:186..692- >mRNA_P-wetherbeei_contig21374.1.1 ID=mRNA_P-wetherbeei_contig21374.1.1|Name=mRNA_P-wetherbeei_contig21374.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig21374:186..692- (Phaeothamnion wetherbeei SAG_119_79)back to top |