mRNA_P-wetherbeei_contig21373.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig21373.1.1
Unique NamemRNA_P-wetherbeei_contig21373.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig21373.1.1 vs. uniprot
Match: UPI000FA1E56B (Uncharacterized protein n=1 Tax=Salmonella enteritidis TaxID=149539 RepID=UPI000FA1E56B)

HSP 1 Score: 481 bits (1238), Expect = 1.060e-170
Identity = 229/268 (85.45%), Postives = 242/268 (90.30%), Query Frame = 1
Query:    1 LNIADIDLDIFIDEVFSLDRRPRAPSTIRPWNEEQLRRFLEDQCGLRCGPSYRRPKGRFVVHHDEAFPVLEALSQNGAMPLTLTHIDAHSDLGTGFGDLSWKDIGGRLLGLPPKDRATAIPKNGMERISPGNYLSYALACRWLRTLIYVHHAQSGDDLMPFFFRDFDPECGVMELRYVPRVRDVHSRQELLALPHTLEPPIPFHKISVEAYRNTEPPDYVILCQSPGYTPVEADALIPIFKDYVDFDNDGSDIFPDLGLHRRPAGEAQ 804
            LNIADIDLDIFID+V S+D+RPRAPSTIR W+EEQ RRFLEDQCGLRC P YRRPKGRFVVHHDEAFPVLEALS+NGA+PLTLTHIDAHSDLGTGFGDLSWK IGGRLLGLPP DRATAIPKNGMERISP NYLSYALACRWLRTL YVHHAQSGDDLMPFFFRDFDPECGVMELR+VP VR  HSR+EL ALPH LEPPI F +I V AYR TEP DYVILCQSPGYTP+EADALIPIF+DYVDFDN  S+ FP LGLH +P GEAQ
Sbjct:    9 LNIADIDLDIFIDQVCSVDQRPRAPSTIRHWSEEQFRRFLEDQCGLRCDPCYRRPKGRFVVHHDEAFPVLEALSENGAIPLTLTHIDAHSDLGTGFGDLSWKGIGGRLLGLPPTDRATAIPKNGMERISPANYLSYALACRWLRTLTYVHHAQSGDDLMPFFFRDFDPECGVMELRHVPGVRQAHSREELRALPHILEPPIAFQRIPVHAYRATEPFDYVILCQSPGYTPIEADALIPIFRDYVDFDNTDSESFPGLGLHLKPIGEAQ 276          
BLAST of mRNA_P-wetherbeei_contig21373.1.1 vs. uniprot
Match: UPI0003CE44ED (UPF0489 family protein n=1 Tax=Mesorhizobium sp. LNJC386A00 TaxID=1287270 RepID=UPI0003CE44ED)

HSP 1 Score: 445 bits (1145), Expect = 1.170e-156
Identity = 216/268 (80.60%), Postives = 234/268 (87.31%), Query Frame = 1
Query:    1 LNIADIDLDIFIDEVFSLDRRPRAPSTIRPWNEEQLRRFLEDQCGLRCGPSYRRPKGRFVVHHDEAFPVLEALSQNGAMPLTLTHIDAHSDLGTGFGDLSWKDIGGRLLGLPPKDRATAIPKNGMERISPGNYLSYALACRWLRTLIYVHHAQSGDDLMPFFFRDFDPECGVMELRYVPRVRDVHSRQELLALPHTLEPPIPFHKISVEAYRNTEPPDYVILCQSPGYTPVEADALIPIFKDYVDFDNDGSDIFPDLGLHRRPAGEAQ 804
            +NIADIDLDIF+D+V SLDRRPRAPST RPWNE+QLRRFLEDQC L+ GPS RRPKGRFVVHHDEAF +L ALSQNGA+PLTLTHIDAHSDLGTGFGD SWK+IGGRLLGL PK+RA AIP+NGMERISP NYLSYALACRWLRTL YVHHAQSGDDLMPFFFRDFD  CGVMELRYVPR+RDVHS +EL ALPHTLEP I F K+ VEAYR T+  DYVILCQSPGYTPVEADALIPIF++YVDFD+ G   FP LG      GEA+
Sbjct:    1 MNIADIDLDIFLDDVCSLDRRPRAPSTTRPWNEKQLRRFLEDQCKLKRGPSSRRPKGRFVVHHDEAFLILNALSQNGAVPLTLTHIDAHSDLGTGFGDRSWKEIGGRLLGLNPKERAAAIPQNGMERISPANYLSYALACRWLRTLTYVHHAQSGDDLMPFFFRDFDQACGVMELRYVPRLRDVHSNEELRALPHTLEPTISFQKVLVEAYRATDLFDYVILCQSPGYTPVEADALIPIFEEYVDFDDGGCRGFPGLGSLASSKGEAR 268          
BLAST of mRNA_P-wetherbeei_contig21373.1.1 vs. uniprot
Match: UPI0014412D1E (UPF0489 family protein n=1 Tax=Rhizobium leguminosarum TaxID=384 RepID=UPI0014412D1E)

HSP 1 Score: 433 bits (1114), Expect = 6.170e-152
Identity = 205/259 (79.15%), Postives = 224/259 (86.49%), Query Frame = 1
Query:    1 LNIADIDLDIFIDEVFSLDRRPRAPSTIRPWNEEQLRRFLEDQCGLRCGPSYRRPKGRFVVHHDEAFPVLEALSQNGAMPLTLTHIDAHSDLGTGFGDLSWKDIGGRLLGLPPKDRATAIPKNGMERISPGNYLSYALACRWLRTLIYVHHAQSGDDLMPFFFRDFDPECGVMELRYVPRVRDVHSRQELLALPHTLEPPIPFHKISVEAYRNTEPPDYVILCQSPGYTPVEADALIPIFKDYVDFDNDGSDIFPDLGL 777
            +NIADIDLDIF+D+V S+DRRPRAPSTIRPWNEEQLR FLEDQCGL  G S RRPKGRF VHHDEAF VLE LSQ G++PLTLTHIDAHSDLGTGFGDLSW DIG RLLGLPPK+R  AI  NGMERISP NYL+YALACRWL++L YVHHAQSGDDLMPFFFRDFDP C VM+LRYVPR+ +VHSR+ LL LPH+LEPP+ F K+ V+ YR  EP DYV LCQSPGYTPVEAD LIPIFKDYVDFDNDGS+ FP  GL
Sbjct:    1 MNIADIDLDIFLDDVCSIDRRPRAPSTIRPWNEEQLRHFLEDQCGLTRGLSSRRPKGRFFVHHDEAFQVLETLSQKGSVPLTLTHIDAHSDLGTGFGDLSWSDIGVRLLGLPPKERKAAILHNGMERISPANYLAYALACRWLKSLTYVHHAQSGDDLMPFFFRDFDPACDVMQLRYVPRLSEVHSRERLLELPHSLEPPVQFQKVQVDKYRAAEPFDYVFLCQSPGYTPVEADMLIPIFKDYVDFDNDGSEGFPGSGL 259          
BLAST of mRNA_P-wetherbeei_contig21373.1.1 vs. uniprot
Match: A0A547LL36_9HYPH (Uncharacterized protein n=2 Tax=unclassified Mesorhizobium TaxID=325217 RepID=A0A547LL36_9HYPH)

HSP 1 Score: 425 bits (1092), Expect = 1.380e-148
Identity = 207/268 (77.24%), Postives = 222/268 (82.84%), Query Frame = 1
Query:    1 LNIADIDLDIFIDEVFSLDRRPRAPSTIRPWNEEQLRRFLEDQCGLRCGPSYRRPKGRFVVHHDEAFPVLEALSQNGAMPLTLTHIDAHSDLGTGFGDLSWKDIGGRLLGLPPKDRATAIPKNGMERISPGNYLSYALACRWLRTLIYVHHAQSGDDLMPFFFRDFDPECGVMELRYVPRVRDVHSRQELLALPHTLEPPIPFHKISVEAYRNTEPPDYVILCQSPGYTPVEADALIPIFKDYVDFDNDGSDIFPDLGLHRRPAGEAQ 804
            +NIADIDLDIF+D+V SLDRRPRAPST RPW  EQLRRFLEDQCGL+   S  RPKGRFVVHHDEAFP+L  LSQNGA+PLTLTHIDAHSDLGTG GDLSWKDIGGRLL L PK+RA AIP +GMERIS  NYLSYALACRWLR L YVHHA SGDDLMPFFFRDFDP CG+MELRYVPRV DV SR+ELLALPH LEPPIPF K+ VEAYR  E  +YVILCQSPGYTP EAD LIPIF+DYVDF +  +  FP  G      GEAQ
Sbjct:    1 MNIADIDLDIFLDDVCSLDRRPRAPSTTRPWTGEQLRRFLEDQCGLKRALSSSRPKGRFVVHHDEAFPILNVLSQNGAVPLTLTHIDAHSDLGTGVGDLSWKDIGGRLLALTPKERAAAIPHHGMERISAANYLSYALACRWLRMLTYVHHAHSGDDLMPFFFRDFDPACGIMELRYVPRVHDVRSREELLALPHILEPPIPFQKVPVEAYRAAELFEYVILCQSPGYTPAEADTLIPIFQDYVDFGDVRAQGFPGSGSLPSGKGEAQ 268          
BLAST of mRNA_P-wetherbeei_contig21373.1.1 vs. uniprot
Match: A0A1W6PZB5_9HYPH (Uncharacterized protein n=1 Tax=Rhizobium sp. NXC14 TaxID=1981173 RepID=A0A1W6PZB5_9HYPH)

HSP 1 Score: 410 bits (1054), Expect = 8.450e-143
Identity = 191/266 (71.80%), Postives = 223/266 (83.83%), Query Frame = 1
Query:    1 LNIADIDLDIFIDEVFSLDRRPRAPSTIRPWNEEQLRRFLEDQCGLRCGPSYRRPKGRFVVHHDEAFPVLEALSQNGAMPLTLTHIDAHSDLGTGFGDLSWKDIGGRLLGLPPKDRATAIPKNGMERISPGNYLSYALACRWLRTLIYVHHAQSGDDLMPFFFRDFDPECGVMELRYVPRVRDVHSRQELLALPHTLEPPIPFHKISVEAYRNTEPPDYVILCQSPGYTPVEADALIPIFKDYVDFDNDGSDIFPDLGLHRRPAGE 798
            +NIADIDLDIF+D+V S+D+RPRAPST RPWNE QLR FLE  CGL   PS +RPKG +VVHHDEAFP+LEALS+NGA+P+TLTH DAHSDLGTG GDLSW +IGGRLLGL P +RA A+P +G ERISP NYLSYALACRWLR+L YVHHAQSGDDLMPFFFR+FD  CGV+ELRY+PR+RD  S++EL ALPH +EPPIPF  +S+E YR  +P DYVILCQSPGYTPVEADAL+PIF+DYVDF+ D    F DL ++  P G+
Sbjct:    1 MNIADIDLDIFLDDVCSIDQRPRAPSTTRPWNEAQLRVFLEGPCGLNRDPSAQRPKGWYVVHHDEAFPILEALSKNGAVPITLTHTDAHSDLGTGLGDLSWMEIGGRLLGLAPSERAAAVPPHGRERISPANYLSYALACRWLRSLTYVHHAQSGDDLMPFFFREFDTTCGVLELRYIPRLRDASSKEELRALPHAVEPPIPFQMVSIEDYRAAKPFDYVILCQSPGYTPVEADALVPIFRDYVDFERDNCQGFSDLSVY--PTGK 264          
BLAST of mRNA_P-wetherbeei_contig21373.1.1 vs. uniprot
Match: A0A2L2LMH8_RHIRD (Uncharacterized protein n=1 Tax=Rhizobium radiobacter TaxID=358 RepID=A0A2L2LMH8_RHIRD)

HSP 1 Score: 406 bits (1043), Expect = 4.000e-141
Identity = 191/259 (73.75%), Postives = 219/259 (84.56%), Query Frame = 1
Query:    1 LNIADIDLDIFIDEVFSLDRRPRAPSTIRPWNEEQLRRFLEDQCGLRCGPSYRRPKGRFVVHHDEAFPVLEALSQNGAMPLTLTHIDAHSDLGTGFGDLSWKDIGGRLLGLPPKDRATAIPKNGMERISPGNYLSYALACRWLRTLIYVHHAQSGDDLMPFFFRDFDPECGVMELRYVPRVRDVHSRQELLALPHTLEPPIPFHKISVEAYRNTEPPDYVILCQSPGYTPVEADALIPIFKDYVDFDNDGSDIFPDLGL 777
            + IADIDLDIF+D+V S DRRPRAPST  PWNE +LR FLED+CGL+  PS +RPKGRF+V HDEAFP+L +LSQNG + L L HIDAHSDLGTG GDLSW+DIGGRLLGLPPK+RA AIP+ GMERISP NYLSYALACRWLR+L+YVHHA+SGDDLMPFFFRDFD  CG+MELRYVP +  VHS++EL ALPHTLEP + F KI +E Y   EP DYVILCQSPGYTPVEAD L+P+F+DYVDF+ND S+ F  LGL
Sbjct:    1 MKIADIDLDIFLDDVSSFDRRPRAPSTTLPWNEAKLRHFLEDRCGLKLDPSAKRPKGRFIVRHDEAFPLLNSLSQNGEVRLNLVHIDAHSDLGTGLGDLSWQDIGGRLLGLPPKERAGAIPQRGMERISPANYLSYALACRWLRSLVYVHHAKSGDDLMPFFFRDFDLGCGIMELRYVPSLHSVHSKEELRALPHTLEPTVQFQKIEIEDYWAAEPFDYVILCQSPGYTPVEADILLPVFRDYVDFENDESEDF--LGL 257          
BLAST of mRNA_P-wetherbeei_contig21373.1.1 vs. uniprot
Match: A0A1C0T0J5_9HYPH (Uncharacterized protein n=3 Tax=unclassified Ensifer TaxID=2633371 RepID=A0A1C0T0J5_9HYPH)

HSP 1 Score: 390 bits (1003), Expect = 4.410e-135
Identity = 184/264 (69.70%), Postives = 215/264 (81.44%), Query Frame = 1
Query:    1 LNIADIDLDIFIDEVFSLDRRPRAPSTIRPWNEEQLRRFLEDQCGLRCGPSYRRPKGRFVVHHDEAFPVLEALSQNGAMPLTLTHIDAHSDLGTGFGDLSWKDIGGRLLGLPPKDRATAIPKNGMERISPGNYLSYALACRWLRTLIYVHHAQSGDDLMPFFFRDFDPECGVMELRYVPRVRDVHSRQELLALPHTLEPPIPFHKISVEAYRNTEPPDYVILCQSPGYTPVEADALIPIFKDYVDFDNDGSDIFPDLGLHRRPA 792
            +++ADIDLDIF+D++ S+DRRPRAPST+RPW+E++LR FLE QC L+ GP   RPKGRF++HHDEAFP+L+ALS NGA PLTLTHIDAHSDLGTGFGD SWKDIGGRLLGL PK R  AIP+ GM+R++P NYLSYALACRWLR+L YVHHA  GDDLMPF FRDFD  CG MELRYVPR+ +  S +EL  LPH LEP IPF K+SV+ Y+ TEP DYVILCQSPGYTPVEAD L+ +F+DYVDFD D    F  +GL   P 
Sbjct:    1 MHLADIDLDIFLDQICSIDRRPRAPSTMRPWDEDKLRDFLEGQCMLKRGPL--RPKGRFIIHHDEAFPILDALSGNGATPLTLTHIDAHSDLGTGFGDASWKDIGGRLLGLAPKQRVGAIPREGMQRLAPSNYLSYALACRWLRSLTYVHHAHGGDDLMPFLFRDFDTGCGAMELRYVPRLDEASSGEELRTLPHVLEPAIPFEKVSVDHYQATEPFDYVILCQSPGYTPVEADVLVSVFQDYVDFDQDD---FLGVGLSLHPG 259          
BLAST of mRNA_P-wetherbeei_contig21373.1.1 vs. uniprot
Match: UPI001C828B11 (hypothetical protein n=1 Tax=Rhizobium bangladeshense TaxID=1138189 RepID=UPI001C828B11)

HSP 1 Score: 305 bits (781), Expect = 2.780e-101
Identity = 150/265 (56.60%), Postives = 188/265 (70.94%), Query Frame = 1
Query:    7 IADIDLDIFIDEVFSLDRRPRAPSTIRPWNEEQLRRFLEDQCGLRCGPSYRRPKGRFVVHHDEAFPVLEALSQNGAMPLTLTHIDAHSDLGTGFGDLSWKDIGGRLLGLPPKDRATAIPKNGMERISPGNYLSYALACRWLRTLIYVHHAQSGDDLMPFFFRDFDPECGVMELRYVPR-VRDVHSRQELLALPHTLEPPIPFHKISVEAYRNTEPPDYVILCQSPGYTPVEADALIPIFKDYVDFDNDGSDIFPDLGLHRR-PAG 795
            +ADIDLDIF+D+V  LDRRPRAPST+  W+E++LR FLE++C L       RP+G F+VHHD A  + E L   G  PL++ HIDAHSDLGTGFGDLSW DIG R+LG+P  +R +   +    R+SP NYLS+ALACRW+ +L YVHH  S DDLMPFFF+DFD E GV+E+R++P  +R   S+ EL  LPH LEP I F +  V+ +R   P D+VILCQSPGYTP+EAD LIPIF+DYVDFD     + P   L  R P+G
Sbjct:    1 MADIDLDIFLDDVSCLDRRPRAPSTVGVWDEKRLRAFLEEKCRLSRHTLQARPRGSFIVHHDAALEIFEDLYCKGTNPLSVIHIDAHSDLGTGFGDLSWMDIGERILGVPAGERTSDFARCRGTRVSPANYLSFALACRWISSLTYVHHPLSDDDLMPFFFKDFDTESGVIEMRHIPSGIRQARSKHELRELPHELEPKITFRREQVDRFRADAPFDHVILCQSPGYTPIEADVLIPIFEDYVDFD-----VSPSRDLSARTPSG 260          
BLAST of mRNA_P-wetherbeei_contig21373.1.1 vs. uniprot
Match: A0A4U6BM15_9BRAD (Uncharacterized protein n=1 Tax=Afipia massiliensis TaxID=211460 RepID=A0A4U6BM15_9BRAD)

HSP 1 Score: 253 bits (645), Expect = 1.060e-80
Identity = 127/251 (50.60%), Postives = 168/251 (66.93%), Query Frame = 1
Query:    7 IADIDLDIFIDEVFSLD-RRPRAPSTIRPWNEEQLRRFLEDQCGLRCGPSYRRPKGRFVVHHDEAFPVLEALS-QNGAMPLTLTHIDAHSDLGTGFGDLSWKDIGGRLLGLPPKDRATAIPKNGMERISPGNYLSYALACRWLRTLIYVHHAQSGDDLMPFFFRDFDPECGVMELRYVPR----VRDVHSRQELLALPHTLEPPIPFHKISVEAYRNTEPPDYVILCQSPGYTPVEADALIPIFKDYVDFD 741
            +ADIDLD+F++   ++D  R R PST+  W+ E+LR FLE++CG    P   R  GRF+V HDEAF ++ AL+ ++GA  L   H+D+H+DLGTG  D +W D+G RLLG+    R  AI + G  ++SP NYL++ LACRWL++LIYVHH   GDDLMPFFFRDFD    V+E+R+VP          S   L  LPH LEP IPF KIS   +    P D++I+CQSPGYTP+E D LIP+  DY+DF+
Sbjct:   14 VADIDLDLFLERFDNIDCGRHRQPSTLGAWSPERLRLFLEEKCGF--NPRRGRIPGRFIVDHDEAFDIIGALAARHGAFDLI--HMDSHADLGTGMFDRTWVDVGSRLLGVDCHQRPAAILREGDAKMSPANYLAFVLACRWLKSLIYVHHPSGGDDLMPFFFRDFDVATNVIEMRFVPEGIEAAIQTMSPDRLRQLPHRLEPAIPFQKISSTQFAAATPFDFIIVCQSPGYTPIETDKLIPVLSDYIDFE 260          
BLAST of mRNA_P-wetherbeei_contig21373.1.1 vs. uniprot
Match: A0A1S1T8Q3_9HYPH (Uncharacterized protein n=2 Tax=Ensifer sp. LCM 4579 TaxID=1848292 RepID=A0A1S1T8Q3_9HYPH)

HSP 1 Score: 228 bits (582), Expect = 6.880e-73
Identity = 108/142 (76.06%), Postives = 120/142 (84.51%), Query Frame = 1
Query:  373 MERISPGNYLSYALACRWLRTLIYVHHAQSGDDLMPFFFRDFDPECGVMELRYVPRVRDVHSRQELLALPHTLEPPIPFHKISVEAYRNTEPPDYVILCQSPGYTPVEADALIPIFKDYVDFDNDGSDIFPDLGLHRRPAGE 798
            M+RISP NYLSYALACRWLR+L YVHHAQSGDDLMPF FRDF+  CG+MELRYVPRVRD  S++EL  LPH LEPPIPF K+SVEAYR TEP DYVILCQSPGYTPVEADALIPIF+DYVDF+ D    FP L +H  P+G+
Sbjct:    1 MQRISPANYLSYALACRWLRSLTYVHHAQSGDDLMPFLFRDFNTTCGIMELRYVPRVRDASSKEELRTLPHALEPPIPFQKVSVEAYRATEPFDYVILCQSPGYTPVEADALIPIFQDYVDFERDDRQGFPSLRVH--PSGK 140          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21373.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000FA1E56B1.060e-17085.45Uncharacterized protein n=1 Tax=Salmonella enterit... [more]
UPI0003CE44ED1.170e-15680.60UPF0489 family protein n=1 Tax=Mesorhizobium sp. L... [more]
UPI0014412D1E6.170e-15279.15UPF0489 family protein n=1 Tax=Rhizobium leguminos... [more]
A0A547LL36_9HYPH1.380e-14877.24Uncharacterized protein n=2 Tax=unclassified Mesor... [more]
A0A1W6PZB5_9HYPH8.450e-14371.80Uncharacterized protein n=1 Tax=Rhizobium sp. NXC1... [more]
A0A2L2LMH8_RHIRD4.000e-14173.75Uncharacterized protein n=1 Tax=Rhizobium radiobac... [more]
A0A1C0T0J5_9HYPH4.410e-13569.70Uncharacterized protein n=3 Tax=unclassified Ensif... [more]
UPI001C828B112.780e-10156.60hypothetical protein n=1 Tax=Rhizobium bangladeshe... [more]
A0A4U6BM15_9BRAD1.060e-8050.60Uncharacterized protein n=1 Tax=Afipia massiliensi... [more]
A0A1S1T8Q3_9HYPH6.880e-7376.06Uncharacterized protein n=2 Tax=Ensifer sp. LCM 45... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig21373contigP-wetherbeei_contig21373:94..900 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog647113.Metok_1228
PFAMsUPF0489
Model size807
Max annot lvl183939|Methanococci
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.31e-42
EggNOG OGsarCOG06671@1|root,arCOG06671@2157|Archaea,2XVS3@28890|Euryarchaeota,23QR4@183939|Methanococci
DescriptionUPF0489 domain
Cds size807
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186223.6698754-CDS-P-wetherbeei_contig21373:93..9001683186223.6698754-CDS-P-wetherbeei_contig21373:93..900Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig21373 94..900 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig21373.1.1prot_P-wetherbeei_contig21373.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig21373 94..900 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig21373.1.1

>prot_P-wetherbeei_contig21373.1.1 ID=prot_P-wetherbeei_contig21373.1.1|Name=mRNA_P-wetherbeei_contig21373.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=269bp
LNIADIDLDIFIDEVFSLDRRPRAPSTIRPWNEEQLRRFLEDQCGLRCGP
SYRRPKGRFVVHHDEAFPVLEALSQNGAMPLTLTHIDAHSDLGTGFGDLS
WKDIGGRLLGLPPKDRATAIPKNGMERISPGNYLSYALACRWLRTLIYVH
HAQSGDDLMPFFFRDFDPECGVMELRYVPRVRDVHSRQELLALPHTLEPP
IPFHKISVEAYRNTEPPDYVILCQSPGYTPVEADALIPIFKDYVDFDNDG
SDIFPDLGLHRRPAGEAQ*
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mRNA from alignment at P-wetherbeei_contig21373:94..900+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig21373.1.1 ID=mRNA_P-wetherbeei_contig21373.1.1|Name=mRNA_P-wetherbeei_contig21373.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=807bp|location=Sequence derived from alignment at P-wetherbeei_contig21373:94..900+ (Phaeothamnion wetherbeei SAG_119_79)
TTGAACATTGCCGATATCGATCTCGATATATTCATAGACGAAGTCTTTTC ACTCGATCGGCGCCCCCGGGCACCTTCGACGATACGCCCCTGGAATGAGG AGCAACTCCGGCGCTTTCTCGAAGACCAGTGCGGACTGAGATGCGGTCCA TCTTATCGCCGGCCCAAGGGGCGGTTTGTCGTCCATCACGATGAGGCATT CCCTGTCCTCGAAGCGCTCTCCCAAAACGGCGCCATGCCGCTAACCTTGA CCCACATCGACGCTCATTCCGATCTGGGAACCGGGTTCGGCGACCTTTCG TGGAAAGACATCGGTGGGAGGCTGCTTGGGCTCCCCCCAAAAGACCGGGC TACAGCAATCCCGAAGAATGGCATGGAGCGAATCTCACCAGGAAATTATC TATCATATGCCTTGGCGTGTCGGTGGCTCCGAACTCTGATCTATGTGCAC CATGCCCAGAGCGGTGATGACCTGATGCCGTTCTTTTTCCGAGATTTCGA TCCGGAATGCGGCGTCATGGAGTTGCGATATGTTCCGCGCGTCCGCGACG TCCATTCAAGGCAAGAGCTCCTTGCCCTGCCGCACACCCTTGAGCCGCCC ATCCCGTTTCATAAGATTTCGGTTGAAGCTTATCGGAACACCGAACCGCC CGATTATGTGATCCTCTGCCAATCCCCTGGGTACACCCCGGTCGAGGCCG ATGCCTTGATCCCGATCTTCAAAGACTACGTCGACTTCGACAATGATGGT TCGGACATTTTTCCAGACTTGGGCTTGCATCGAAGACCCGCAGGAGAAGC TCAGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig21373:94..900+

>mRNA_P-wetherbeei_contig21373.1.1 ID=mRNA_P-wetherbeei_contig21373.1.1|Name=mRNA_P-wetherbeei_contig21373.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=807bp|location=Sequence derived from alignment at P-wetherbeei_contig21373:94..900+ (Phaeothamnion wetherbeei SAG_119_79)
TTGAACATTGCCGATATCGATCTCGATATATTCATAGACGAAGTCTTTTC
ACTCGATCGGCGCCCCCGGGCACCTTCGACGATACGCCCCTGGAATGAGG
AGCAACTCCGGCGCTTTCTCGAAGACCAGTGCGGACTGAGATGCGGTCCA
TCTTATCGCCGGCCCAAGGGGCGGTTTGTCGTCCATCACGATGAGGCATT
CCCTGTCCTCGAAGCGCTCTCCCAAAACGGCGCCATGCCGCTAACCTTGA
CCCACATCGACGCTCATTCCGATCTGGGAACCGGGTTCGGCGACCTTTCG
TGGAAAGACATCGGTGGGAGGCTGCTTGGGCTCCCCCCAAAAGACCGGGC
TACAGCAATCCCGAAGAATGGCATGGAGCGAATCTCACCAGGAAATTATC
TATCATATGCCTTGGCGTGTCGGTGGCTCCGAACTCTGATCTATGTGCAC
CATGCCCAGAGCGGTGATGACCTGATGCCGTTCTTTTTCCGAGATTTCGA
TCCGGAATGCGGCGTCATGGAGTTGCGATATGTTCCGCGCGTCCGCGACG
TCCATTCAAGGCAAGAGCTCCTTGCCCTGCCGCACACCCTTGAGCCGCCC
ATCCCGTTTCATAAGATTTCGGTTGAAGCTTATCGGAACACCGAACCGCC
CGATTATGTGATCCTCTGCCAATCCCCTGGGTACACCCCGGTCGAGGCCG
ATGCCTTGATCCCGATCTTCAAAGACTACGTCGACTTCGACAATGATGGT
TCGGACATTTTTCCAGACTTGGGCTTGCATCGAAGACCCGCAGGAGAAGC
TCAGTGA
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