mRNA_P-wetherbeei_contig2131.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig2131.5.1
Unique NamemRNA_P-wetherbeei_contig2131.5.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2131.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig2131contigP-wetherbeei_contig2131:1965..5535 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size3572
Hectar predicted targeting categoryother localisation
Exons1
Cds size3570
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186221.555448-CDS-P-wetherbeei_contig2131:1964..55341683186221.555448-CDS-P-wetherbeei_contig2131:1964..5534Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2131 1965..5534 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig2131.5.1prot_P-wetherbeei_contig2131.5.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig2131 1965..5534 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig2131.5.1

>prot_P-wetherbeei_contig2131.5.1 ID=prot_P-wetherbeei_contig2131.5.1|Name=mRNA_P-wetherbeei_contig2131.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=1190bp
PFEDRRVLRAVAEASSAALGRVMAAAAGDAIGAPPPRPPALWRLCAACDA
VLSGGLPPLPPILAAGDGAAGHESAAAAERESKARAMVRLLHIWTKAAPW
ALGRLVAAALNHPAAAAELSDAQTELREALSAGRSGVGFGGDAADAFLDA
PAATLLLNRLTHARVPGWEAVDGAMAPVPPYLCDTGSKSGGGSGSESSGS
SVGDDDADGCSFGDGSAAGQDRRAALAPVSLEVCLRSLFQARSDGGSSCF
GSGGAIPDVFWVADGLARAVERDAAYLLAPSPRNTAEVAGHWGYGAVAAA
ASGGSRSSGGDDRLQAVLRVVQRYVAWLPWEAVVARLRHRLLHAIEAKDS
AGAGCGASAVVGTGSAAADASAQLSISALCRLLDCWSAAGVDVSGAAAMV
FDARVAKAVLVGLPLPGLPATTPPLWLEALRWLVLHDETFGLKLALNTEA
GDWLAAAAAGEVSVAKAAAVATSAVACSEQEAAATAAMAVEDVDRRFAAR
QRSAHGVTAAAVALWIGTSDVPPEERRAWVEWYADTFLAVTVAVSTRSFE
DDARASGAKASVRADRITAFYDEAARRRAALAAWGFRSADEYGSGASYAT
CPSSLPRVPSPLPLPPLPPFQDWLAFAAGVRPLAAPEAERLPGYLARLCF
GFYLPTEFGGDWGVLMQHFFAFLAGCNDSADGGPSGGTIGSGYGSYGGGN
GGNGNDRAASSVGMVVTGRAVTLRFMREQLLSWPLPVAVGAAAGGDRGGC
SGFSGHASRWLWPLRAVADAILPSLTAPPRLLAEALETVPPDLLCGARFL
TICRCFAIPLFRESEPAAAVAGAVSAAAVAAAAAVGPKGATAAQQPKLRV
MVPMLPIWFVDEAMALARAILRQERQRCSGGCGSRSVDVSIAVLAGLGTL
YHEVVGGSDDSRGGDGGETGAGAALVAARLKEFIESALDTDGVVGRGDAR
LFAVLEAQQAWRALPLVEAAAASVGAAGTEVGLTSTDAAWQVRRQRLFPS
GADGGRSRKTAAAVGGAGATRLLRPALALGSRAGAQVRTGCGDSGGGGST
SGGSSIASRIDGDGSGGNNSHMTGQSSADADASGKKVDLSGLGEPDASTA
AAAAASSPAARTHGALLPPPLKATPRVRLSWAPDTEDRQVFLATAGAIMG
ERAAAAAAAVCASSVAVHPSTGGNGKKRAAQRSPDGENFG
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mRNA from alignment at P-wetherbeei_contig2131:1965..5535+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig2131.5.1 ID=mRNA_P-wetherbeei_contig2131.5.1|Name=mRNA_P-wetherbeei_contig2131.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3571bp|location=Sequence derived from alignment at P-wetherbeei_contig2131:1965..5535+ (Phaeothamnion wetherbeei SAG_119_79)
CCGTTCGAGGACCGGCGGGTGCTGCGCGCCGTCGCTGAGGCGTCCTCCGC
TGCGCTTGGAAGAGTCATGGCTGCCGCGGCTGGCGACGCGATAGGAGCGC
CGCCGCCGCGGCCGCCAGCGCTGTGGCGGCTGTGTGCGGCTTGCGACGCC
GTGCTGAGCGGCGGTCTGCCGCCGCTGCCCCCAATCCTGGCCGCTGGCGA
CGGTGCTGCCGGGCACGAAAGTGCTGCTGCTGCAGAGCGGGAGTCGAAGG
CGCGGGCAATGGTTCGGCTGCTGCACATCTGGACGAAGGCGGCGCCGTGG
GCGCTCGGGCGGCTGGTCGCTGCCGCCCTCAATCACCCTGCGGCCGCGGC
GGAGCTGTCGGACGCGCAAACGGAACTGCGGGAGGCGCTGTCGGCGGGCA
GATCCGGCGTGGGCTTTGGCGGTGATGCGGCCGACGCATTTCTGGACGCC
CCGGCGGCGACGCTTCTGCTGAACCGCCTGACCCACGCGCGAGTCCCTGG
CTGGGAGGCTGTCGACGGGGCCATGGCGCCGGTCCCGCCGTACCTTTGTG
ACACAGGCAGCAAGAGCGGCGGCGGCAGTGGCAGCGAGAGCAGCGGCAGC
AGCGTCGGCGACGACGACGCTGACGGCTGCTCCTTTGGCGACGGCAGCGC
TGCCGGCCAAGACCGCCGGGCGGCGCTCGCTCCTGTGAGTCTGGAAGTGT
GTCTCCGATCGCTCTTCCAAGCCCGCAGCGACGGCGGCAGCAGCTGCTTC
GGGAGCGGTGGCGCAATTCCCGACGTCTTTTGGGTAGCGGATGGCCTGGC
GCGTGCCGTGGAACGCGACGCAGCGTACCTTCTGGCACCATCGCCGCGGA
ACACTGCCGAAGTCGCGGGGCATTGGGGCTATGGAGCCGTTGCCGCCGCC
GCCAGCGGCGGGAGCAGAAGCAGCGGTGGTGACGACCGGCTGCAGGCGGT
GCTGCGTGTCGTGCAGCGCTACGTGGCGTGGCTGCCGTGGGAAGCCGTGG
TGGCACGTTTGCGGCATCGACTCTTGCATGCCATAGAAGCGAAAGATAGT
GCCGGCGCCGGCTGCGGCGCTTCTGCCGTCGTTGGCACCGGATCTGCAGC
CGCGGACGCCTCCGCCCAACTTTCTATCTCCGCACTGTGCCGCCTGCTTG
ACTGCTGGTCAGCCGCTGGCGTCGACGTTTCCGGTGCCGCGGCGATGGTT
TTCGACGCCCGCGTCGCAAAAGCCGTCCTGGTAGGTCTGCCGCTTCCCGG
GTTGCCGGCGACGACGCCGCCTCTCTGGCTGGAGGCTCTCCGTTGGCTTG
TGCTTCACGATGAGACATTTGGACTGAAGCTAGCGTTGAATACGGAAGCC
GGCGACTGGCTGGCGGCGGCAGCGGCTGGAGAAGTGTCGGTGGCAAAAGC
AGCGGCGGTGGCAACGTCGGCGGTGGCTTGCAGCGAGCAGGAAGCTGCTG
CGACGGCGGCCATGGCGGTTGAAGACGTGGACCGCCGTTTCGCGGCGCGG
CAGCGGTCAGCGCACGGCGTGACGGCAGCAGCCGTGGCGCTATGGATCGG
CACCAGCGACGTGCCTCCGGAGGAGCGCCGGGCGTGGGTCGAGTGGTATG
CAGACACGTTTCTGGCCGTGACGGTTGCTGTCTCCACTCGTTCTTTTGAG
GACGACGCCAGAGCGTCAGGGGCGAAGGCGTCAGTTAGGGCTGACAGGAT
CACGGCGTTTTACGACGAGGCTGCTCGGCGGCGGGCGGCGCTGGCGGCGT
GGGGCTTTCGGAGCGCCGATGAATACGGCAGTGGTGCATCGTATGCGACC
TGCCCTTCGTCGTTGCCGCGGGTGCCGTCGCCGCTACCGTTGCCGCCGCT
GCCGCCGTTTCAGGATTGGCTGGCGTTCGCAGCGGGGGTCCGGCCGTTGG
CCGCGCCGGAGGCGGAGCGGCTCCCGGGGTACCTGGCGCGCCTCTGCTTC
GGCTTCTACCTGCCCACCGAATTCGGCGGCGATTGGGGCGTCCTGATGCA
GCACTTCTTCGCTTTCCTTGCCGGCTGCAACGACAGCGCCGACGGCGGCC
CGAGTGGCGGCACTATTGGCAGTGGTTACGGCAGCTATGGCGGCGGCAAC
GGCGGGAACGGCAACGACAGAGCGGCCAGCAGCGTCGGAATGGTCGTCAC
CGGGCGCGCGGTGACGCTGCGCTTCATGCGGGAGCAACTGCTGTCGTGGC
CGCTGCCAGTGGCAGTTGGCGCTGCCGCCGGCGGTGACCGCGGCGGCTGC
AGTGGCTTCTCTGGTCACGCAAGCCGGTGGTTATGGCCGCTGCGGGCTGT
CGCGGATGCAATACTTCCTTCGCTCACCGCACCGCCGCGTCTCCTGGCTG
AAGCGCTGGAAACCGTTCCTCCGGATCTGCTGTGTGGGGCGCGGTTCCTC
ACCATCTGCCGTTGCTTCGCGATTCCGCTGTTTCGCGAATCGGAACCAGC
CGCTGCGGTGGCGGGAGCGGTCTCAGCTGCGGCCGTGGCCGCGGCAGCGG
CGGTCGGGCCGAAGGGAGCGACGGCTGCCCAGCAACCGAAGCTGCGGGTG
ATGGTACCAATGCTTCCAATCTGGTTTGTGGATGAGGCCATGGCGCTTGC
TCGCGCCATCTTGCGGCAAGAGAGGCAACGTTGCAGCGGCGGCTGCGGCA
GCCGCTCCGTAGACGTGTCGATTGCCGTGCTGGCCGGCCTCGGGACCCTT
TACCACGAAGTGGTCGGCGGCAGCGACGACAGCAGGGGCGGCGACGGCGG
CGAAACCGGCGCAGGTGCGGCGTTAGTGGCCGCCCGGCTGAAGGAGTTTA
TAGAATCTGCGTTGGACACGGACGGCGTCGTTGGCCGTGGAGATGCGCGG
CTGTTCGCTGTACTTGAGGCGCAGCAGGCGTGGCGCGCGCTGCCGCTGGT
GGAGGCGGCGGCGGCATCGGTCGGGGCAGCGGGAACAGAAGTGGGATTGA
CCAGCACCGACGCGGCGTGGCAAGTGCGCCGCCAGCGGCTGTTCCCATCG
GGCGCTGATGGTGGGCGCAGCAGGAAAACGGCGGCCGCTGTTGGCGGGGC
GGGCGCCACGCGCCTGCTGCGGCCGGCGCTCGCGTTGGGATCGCGCGCCG
GAGCGCAGGTTCGGACCGGCTGCGGCGACAGCGGCGGCGGCGGCAGCACC
AGCGGCGGAAGCTCTATAGCAAGCAGGATCGACGGCGATGGCAGCGGCGG
AAATAACAGCCATATGACGGGCCAAAGCAGCGCCGACGCGGACGCGAGCG
GCAAGAAGGTCGACCTGAGTGGACTCGGCGAGCCGGACGCGTCTACAGCT
GCCGCCGCCGCCGCATCTTCGCCGGCGGCGCGCACGCACGGCGCGCTGTT
GCCTCCGCCACTAAAGGCCACGCCGCGGGTGCGACTGTCATGGGCGCCAG
ACACGGAGGACCGACAGGTGTTTCTCGCGACAGCGGGGGCAATAATGGGC
GAAAGGGCTGCAGCGGCGGCGGCAGCAGTTTGTGCCTCAAGTGTGGCTGT
GCATCCTTCCACCGGCGGCAACGGCAAAAAGAGGGCGGCGCAACGCTCTC
CGGATGGGGAGAATTTTGGCA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig2131:1965..5535+

>mRNA_P-wetherbeei_contig2131.5.1 ID=mRNA_P-wetherbeei_contig2131.5.1|Name=mRNA_P-wetherbeei_contig2131.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=3570bp|location=Sequence derived from alignment at P-wetherbeei_contig2131:1965..5535+ (Phaeothamnion wetherbeei SAG_119_79)
CCGTTCGAGGACCGGCGGGTGCTGCGCGCCGTCGCTGAGGCGTCCTCCGC
TGCGCTTGGAAGAGTCATGGCTGCCGCGGCTGGCGACGCGATAGGAGCGC
CGCCGCCGCGGCCGCCAGCGCTGTGGCGGCTGTGTGCGGCTTGCGACGCC
GTGCTGAGCGGCGGTCTGCCGCCGCTGCCCCCAATCCTGGCCGCTGGCGA
CGGTGCTGCCGGGCACGAAAGTGCTGCTGCTGCAGAGCGGGAGTCGAAGG
CGCGGGCAATGGTTCGGCTGCTGCACATCTGGACGAAGGCGGCGCCGTGG
GCGCTCGGGCGGCTGGTCGCTGCCGCCCTCAATCACCCTGCGGCCGCGGC
GGAGCTGTCGGACGCGCAAACGGAACTGCGGGAGGCGCTGTCGGCGGGCA
GATCCGGCGTGGGCTTTGGCGGTGATGCGGCCGACGCATTTCTGGACGCC
CCGGCGGCGACGCTTCTGCTGAACCGCCTGACCCACGCGCGAGTCCCTGG
CTGGGAGGCTGTCGACGGGGCCATGGCGCCGGTCCCGCCGTACCTTTGTG
ACACAGGCAGCAAGAGCGGCGGCGGCAGTGGCAGCGAGAGCAGCGGCAGC
AGCGTCGGCGACGACGACGCTGACGGCTGCTCCTTTGGCGACGGCAGCGC
TGCCGGCCAAGACCGCCGGGCGGCGCTCGCTCCTGTGAGTCTGGAAGTGT
GTCTCCGATCGCTCTTCCAAGCCCGCAGCGACGGCGGCAGCAGCTGCTTC
GGGAGCGGTGGCGCAATTCCCGACGTCTTTTGGGTAGCGGATGGCCTGGC
GCGTGCCGTGGAACGCGACGCAGCGTACCTTCTGGCACCATCGCCGCGGA
ACACTGCCGAAGTCGCGGGGCATTGGGGCTATGGAGCCGTTGCCGCCGCC
GCCAGCGGCGGGAGCAGAAGCAGCGGTGGTGACGACCGGCTGCAGGCGGT
GCTGCGTGTCGTGCAGCGCTACGTGGCGTGGCTGCCGTGGGAAGCCGTGG
TGGCACGTTTGCGGCATCGACTCTTGCATGCCATAGAAGCGAAAGATAGT
GCCGGCGCCGGCTGCGGCGCTTCTGCCGTCGTTGGCACCGGATCTGCAGC
CGCGGACGCCTCCGCCCAACTTTCTATCTCCGCACTGTGCCGCCTGCTTG
ACTGCTGGTCAGCCGCTGGCGTCGACGTTTCCGGTGCCGCGGCGATGGTT
TTCGACGCCCGCGTCGCAAAAGCCGTCCTGGTAGGTCTGCCGCTTCCCGG
GTTGCCGGCGACGACGCCGCCTCTCTGGCTGGAGGCTCTCCGTTGGCTTG
TGCTTCACGATGAGACATTTGGACTGAAGCTAGCGTTGAATACGGAAGCC
GGCGACTGGCTGGCGGCGGCAGCGGCTGGAGAAGTGTCGGTGGCAAAAGC
AGCGGCGGTGGCAACGTCGGCGGTGGCTTGCAGCGAGCAGGAAGCTGCTG
CGACGGCGGCCATGGCGGTTGAAGACGTGGACCGCCGTTTCGCGGCGCGG
CAGCGGTCAGCGCACGGCGTGACGGCAGCAGCCGTGGCGCTATGGATCGG
CACCAGCGACGTGCCTCCGGAGGAGCGCCGGGCGTGGGTCGAGTGGTATG
CAGACACGTTTCTGGCCGTGACGGTTGCTGTCTCCACTCGTTCTTTTGAG
GACGACGCCAGAGCGTCAGGGGCGAAGGCGTCAGTTAGGGCTGACAGGAT
CACGGCGTTTTACGACGAGGCTGCTCGGCGGCGGGCGGCGCTGGCGGCGT
GGGGCTTTCGGAGCGCCGATGAATACGGCAGTGGTGCATCGTATGCGACC
TGCCCTTCGTCGTTGCCGCGGGTGCCGTCGCCGCTACCGTTGCCGCCGCT
GCCGCCGTTTCAGGATTGGCTGGCGTTCGCAGCGGGGGTCCGGCCGTTGG
CCGCGCCGGAGGCGGAGCGGCTCCCGGGGTACCTGGCGCGCCTCTGCTTC
GGCTTCTACCTGCCCACCGAATTCGGCGGCGATTGGGGCGTCCTGATGCA
GCACTTCTTCGCTTTCCTTGCCGGCTGCAACGACAGCGCCGACGGCGGCC
CGAGTGGCGGCACTATTGGCAGTGGTTACGGCAGCTATGGCGGCGGCAAC
GGCGGGAACGGCAACGACAGAGCGGCCAGCAGCGTCGGAATGGTCGTCAC
CGGGCGCGCGGTGACGCTGCGCTTCATGCGGGAGCAACTGCTGTCGTGGC
CGCTGCCAGTGGCAGTTGGCGCTGCCGCCGGCGGTGACCGCGGCGGCTGC
AGTGGCTTCTCTGGTCACGCAAGCCGGTGGTTATGGCCGCTGCGGGCTGT
CGCGGATGCAATACTTCCTTCGCTCACCGCACCGCCGCGTCTCCTGGCTG
AAGCGCTGGAAACCGTTCCTCCGGATCTGCTGTGTGGGGCGCGGTTCCTC
ACCATCTGCCGTTGCTTCGCGATTCCGCTGTTTCGCGAATCGGAACCAGC
CGCTGCGGTGGCGGGAGCGGTCTCAGCTGCGGCCGTGGCCGCGGCAGCGG
CGGTCGGGCCGAAGGGAGCGACGGCTGCCCAGCAACCGAAGCTGCGGGTG
ATGGTACCAATGCTTCCAATCTGGTTTGTGGATGAGGCCATGGCGCTTGC
TCGCGCCATCTTGCGGCAAGAGAGGCAACGTTGCAGCGGCGGCTGCGGCA
GCCGCTCCGTAGACGTGTCGATTGCCGTGCTGGCCGGCCTCGGGACCCTT
TACCACGAAGTGGTCGGCGGCAGCGACGACAGCAGGGGCGGCGACGGCGG
CGAAACCGGCGCAGGTGCGGCGTTAGTGGCCGCCCGGCTGAAGGAGTTTA
TAGAATCTGCGTTGGACACGGACGGCGTCGTTGGCCGTGGAGATGCGCGG
CTGTTCGCTGTACTTGAGGCGCAGCAGGCGTGGCGCGCGCTGCCGCTGGT
GGAGGCGGCGGCGGCATCGGTCGGGGCAGCGGGAACAGAAGTGGGATTGA
CCAGCACCGACGCGGCGTGGCAAGTGCGCCGCCAGCGGCTGTTCCCATCG
GGCGCTGATGGTGGGCGCAGCAGGAAAACGGCGGCCGCTGTTGGCGGGGC
GGGCGCCACGCGCCTGCTGCGGCCGGCGCTCGCGTTGGGATCGCGCGCCG
GAGCGCAGGTTCGGACCGGCTGCGGCGACAGCGGCGGCGGCGGCAGCACC
AGCGGCGGAAGCTCTATAGCAAGCAGGATCGACGGCGATGGCAGCGGCGG
AAATAACAGCCATATGACGGGCCAAAGCAGCGCCGACGCGGACGCGAGCG
GCAAGAAGGTCGACCTGAGTGGACTCGGCGAGCCGGACGCGTCTACAGCT
GCCGCCGCCGCCGCATCTTCGCCGGCGGCGCGCACGCACGGCGCGCTGTT
GCCTCCGCCACTAAAGGCCACGCCGCGGGTGCGACTGTCATGGGCGCCAG
ACACGGAGGACCGACAGGTGTTTCTCGCGACAGCGGGGGCAATAATGGGC
GAAAGGGCTGCAGCGGCGGCGGCAGCAGTTTGTGCCTCAAGTGTGGCTGT
GCATCCTTCCACCGGCGGCAACGGCAAAAAGAGGGCGGCGCAACGCTCTC
CGGATGGGGAGAATTTTGGC
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