mRNA_P-wetherbeei_contig21281.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig21281.1.1
Unique NamemRNA_P-wetherbeei_contig21281.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig21281.1.1 vs. uniprot
Match: D7FMK5_ECTSI (Dynein-1-alpha heavy chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMK5_ECTSI)

HSP 1 Score: 370 bits (951), Expect = 5.800e-114
Identity = 180/277 (64.98%), Postives = 225/277 (81.23%), Query Frame = 1
Query:    1 QVFEAMVEKLAPTPSKFHYIFNLRDLSRVFEGLCLATVDKISTAGAFVRLWRNECLRVFGDRLVGDPDAAVLAEVMAAGTRGAWPDAADAALRDPIVFGDYELAVQRLLSGGESGGGGGEDPRLYGDLGGHDDARRVFEEVLENYNLDHKPMNLVLFESALEHLTRVHRILRMPRGNALLVGVGGSGKRSLARLAAYCAGCESFEITLVRNYSETEFKEDLKSLYRKVAVGPVAFLFTDAHVVEEGFLEAVNNILTTGMVPGLFDRDEAEQLAATVR 831
            ++++ +VE+L PTPSKFHYIFNLRDLSRV+EGLCLAT D  STA +FVRLWRNEC+RVFGDRL  + D  +L+  + +  + AWP++ + A+ +P++ GDY LA+QRL+  GE       DP+LY DLG +D  R+VFEEVLENYNLDHKPMNLVLFESAL+HLTR++RI+RM RGNA+LVGVGGSGK+SL +LAAYCAG   F I+LVRNY ETEF+EDLK L++++  GPV FLFTDAHVVEEGFLE +NNILTTGMVP LF++DE +Q   +VR
Sbjct: 2763 KLYKIIVERLPPTPSKFHYIFNLRDLSRVYEGLCLATEDMFSTADSFVRLWRNECVRVFGDRLFVE-DMGMLSTEIESAIKAAWPNSTEYAMTNPLLVGDYALAIQRLVDEGE-------DPQLYQDLGDYDRTRKVFEEVLENYNLDHKPMNLVLFESALDHLTRIYRIIRMSRGNAMLVGVGGSGKKSLTQLAAYCAGYTVFSISLVRNYGETEFREDLKQLFKRLGAGPVVFLFTDAHVVEEGFLEFINNILTTGMVPALFEKDETDQCINSVR 3031          
BLAST of mRNA_P-wetherbeei_contig21281.1.1 vs. uniprot
Match: A0A482UKB5_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UKB5_9ARCH)

HSP 1 Score: 342 bits (878), Expect = 9.110e-107
Identity = 170/277 (61.37%), Postives = 210/277 (75.81%), Query Frame = 1
Query:    1 QVFEAMVEKLAPTPSKFHYIFNLRDLSRVFEGLCLATVDKISTAGAFVRLWRNECLRVFGDRLVGDPDAAVLAEVMAAGTRGAWPDAADAALRDPIVFGDYELAVQRLLSGGESGGGGGEDPRLYGDLGGHDDARRVFEEVLENYNLDHKPMNLVLFESALEHLTRVHRILRMPRGNALLVGVGGSGKRSLARLAAYCAGCESFEITLVRNYSETEFKEDLKSLYRKVAVGPVAFLFTDAHVVEEGFLEAVNNILTTGMVPGLFDRDEAEQLAATVR 831
            +++  ++E+L PTP+KFHYIFNLRDL RV+EGLCLAT D  +   AFVRLWRNECLR+F DRL+ + D  V+  ++A   R  + DAA  AL DPI+FGDY+ AV+RL  G E       D RLY DL  + D R+V +EVLE YN DHK M+LVLFE ALEHLTR+HRI+RMPRGNALLVGVGGSGK+SL RLA + AG   FEITLVRNY E +F+ DLK+LY+++  GP  FLFTDAHV+EEGFLE +NN+LTTGMVP L++ DE +QL  +VR
Sbjct:  112 RLYTTVIERLPPTPAKFHYIFNLRDLGRVYEGLCLATPDVFNAGDAFVRLWRNECLRIFSDRLISEADVGVVDGILADIIRTTFADAAPKALADPILFGDYKRAVERLSDGKE-------DARLYTDLCTYADVRKVCDEVLELYNSDHKVMSLVLFEMALEHLTRIHRIIRMPRGNALLVGVGGSGKQSLTRLATFMAGYSLFEITLVRNYGEADFRNDLKNLYKQLGKGPTVFLFTDAHVIEEGFLELINNMLTTGMVPALYETDERDQLINSVR 381          
BLAST of mRNA_P-wetherbeei_contig21281.1.1 vs. uniprot
Match: A0A836CGZ2_9STRA (Dynein heavy chain and region D6 of dynein motor-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGZ2_9STRA)

HSP 1 Score: 335 bits (858), Expect = 1.770e-101
Identity = 179/304 (58.88%), Postives = 216/304 (71.05%), Query Frame = 1
Query:    1 QVFEAMVEKLAPTPSKFHYIFNLRDLSRVFEGLCLATVDKISTAGAFVRLWRNECLRVFGDRLVGDPDAAVLAEVMAAGTRGAWP-DAADAALRDPIVFGDYELAVQRLLSGGESGGGGGED-------------------------PRLYGDLGGHDDARRVFEEVLENYNLDH-KPMNLVLFESALEHLTRVHRILRMPRGNALLVGVGGSGKRSLARLAAYCAGCESFEITLVRNYSETEFKEDLKSLYRKVAVGPVAFLFTDAHVVEEGFLEAVNNILTTGMVPGLFDRDEAEQLAATVR 831
            +VF A V +L PTP+KFHYIFNLRDLSRVFEGLCLAT D  +T  + VRLWR+ECLR+FGDRL+ + DA VL   + A  R AW    A+AAL DP+VFGD++ A+ RL      GGGG +D                         P+LY D+G +   R VF++VLE+YN DH +PMNLVLFESALEHL R HR+L +PRG+ALLVGVGGSGK+SL RLAAYCAG E FEI LVRNY E EF+ DLK LYR++ +GPV FL TDAHVV+EGFLE VNN+LTTG VP LF++DE E   ++VR
Sbjct: 1675 RVFGAAVARLPPTPAKFHYIFNLRDLSRVFEGLCLATEDCFATEASIVRLWRHECLRIFGDRLLQE-DAPVLRAEIEAAARAAWSAPVAEAALSDPLVFGDFDAAMARL------GGGGADDQTEXXGAASVTPAVTAVTAGVATAQPQLYQDVGDYARVRGVFDDVLESYNADHGRPMNLVLFESALEHLLRAHRVLSLPRGHALLVGVGGSGKKSLCRLAAYCAGYEVFEIKLVRNYGEAEFRADLKELYRRLVLGPVVFLLTDAHVVQEGFLEYVNNMLTTGAVPALFEKDEIEACKSSVR 1971          
BLAST of mRNA_P-wetherbeei_contig21281.1.1 vs. uniprot
Match: A0A7S2D309_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D309_9STRA)

HSP 1 Score: 326 bits (836), Expect = 5.090e-101
Identity = 161/277 (58.12%), Postives = 200/277 (72.20%), Query Frame = 1
Query:    1 QVFEAMVEKLAPTPSKFHYIFNLRDLSRVFEGLCLATVDKISTAGAFVRLWRNECLRVFGDRLVGDPDAAVLAEVMAAGTRGAWPDAADAALRDPIVFGDYELAVQRLLSGGESGGGGGEDPRLYGDLGGHDDARRVFEEVLENYNLDHKPMNLVLFESALEHLTRVHRILRMPRGNALLVGVGGSGKRSLARLAAYCAGCESFEITLVRNYSETEFKEDLKSLYRKVAVGPVAFLFTDAHVVEEGFLEAVNNILTTGMVPGLFDRDEAEQLAATVR 831
            ++F  + +KL  TPSKFHYIFNLRDLSR+FEGLC+AT+DK +T+ + VRLWRNEC R+F DRL    D A++ E +A      W + +   L DP+VFGDYEL + RL S  E       DPRLY D+G  D   ++F +VLE +NLDHKPM LVLFE AL HL R+HRILRMP GNALL+GVGGSGK+SL  LAAYCAG   F ITL+R Y E  F+EDLK LY+ +    V FLFTDAHV +EGFLE++NN+LTTGMVP L+++DE +Q   +VR
Sbjct:  165 KLFHFICDKLPATPSKFHYIFNLRDLSRIFEGLCMATIDKFTTSKSIVRLWRNECTRIFMDRLSTAADGALVNEQLAELVNANWSECSADVLADPMVFGDYELCIDRLESEAE-------DPRLYQDMGDMDRQLKIFNQVLELHNLDHKPMQLVLFEDALNHLVRIHRILRMPMGNALLIGVGGSGKQSLVNLAAYCAGQSVFTITLIRGYGEEMFREDLKDLYKLLGTKEVVFLFTDAHVADEGFLESINNMLTTGMVPALYEQDEKDQCINSVR 434          
BLAST of mRNA_P-wetherbeei_contig21281.1.1 vs. uniprot
Match: F0YN37_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YN37_AURAN)

HSP 1 Score: 324 bits (830), Expect = 1.030e-97
Identity = 162/277 (58.48%), Postives = 207/277 (74.73%), Query Frame = 1
Query:    1 QVFEAMVEKLAPTPSKFHYIFNLRDLSRVFEGLCLATVDKISTAGAFVRLWRNECLRVFGDRLVGDPDAAVLAEVMAAGTRGAWPDAADAALRDPIVFGDYELAVQRLLSGGESGGGGGEDPRLYGDLGGHDDARRVFEEVLENYNLDHKPMNLVLFESALEHLTRVHRILRMPRGNALLVGVGGSGKRSLARLAAYCAGCESFEITLVRNYSETEFKEDLKSLYRKVAVGPVAFLFTDAHVVEEGFLEAVNNILTTGMVPGLFDRDEAEQLAATVR 831
            ++F  +VE L PTP+KFHYIFNLRDLSRV EG+CLAT D   T+ + VRL+RNE  R+F DRLV + D  ++   ++     A+P+  D AL +P+VFGDY+ AV+RL    E       DPRLY D+G  +  R++F+ V+ENYN+D+ PM LVLFE ALEHLTRVHRI+R+PRGNALL+GVGGSGK+SL RLAAYCAG + F I+LVRNY E EF+ DLK+LY K+    V FLFTDAHV +EGFLE +NN+LTTGMVP L+++DE +QL  +VR
Sbjct: 2597 KLFAFIVESLPPTPAKFHYIFNLRDLSRVTEGICLATPDTFDTSWSIVRLFRNEVQRIFCDRLVSEADLTLVEGKVSELIGEAFPECKDEALENPLVFGDYKHAVRRLTEEAE-------DPRLYCDMGSLEGTRKIFDAVMENYNMDNSPMTLVLFEQALEHLTRVHRIIRLPRGNALLIGVGGSGKQSLTRLAAYCAGYDIFNISLVRNYGEDEFRADLKTLYTKLGEKEVVFLFTDAHVAQEGFLEFLNNMLTTGMVPALYEQDERDQLCNSVR 2866          
BLAST of mRNA_P-wetherbeei_contig21281.1.1 vs. uniprot
Match: T0QFT1_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QFT1_SAPDV)

HSP 1 Score: 320 bits (821), Expect = 1.660e-96
Identity = 164/277 (59.21%), Postives = 201/277 (72.56%), Query Frame = 1
Query:    1 QVFEAMVEKLAPTPSKFHYIFNLRDLSRVFEGLCLATVDKISTAGAFVRLWRNECLRVFGDRLVGDPDAAVLAEVMAAGTRGAWPDAADAALRDPIVFGDYELAVQRLLSGGESGGGGGEDPRLYGDLGGHDDARRVFEEVLENYNLDHKPMNLVLFESALEHLTRVHRILRMPRGNALLVGVGGSGKRSLARLAAYCAGCESFEITLVRNYSETEFKEDLKSLYRKVAVGPVAFLFTDAHVVEEGFLEAVNNILTTGMVPGLFDRDEAEQLAATVR 831
            ++F+ +VEKL PTPSKFHYIFNLRDL RV EG+C+AT D+  ++   VRLWRNE  R+F DRL    D  V+    A      +P  A  AL DP++FGDY     RL      GGGGGED RLY D+  +   + +FEEVLE YNLD+KPM LVLFE ALEHL+R+ RI+R P G+ALL+GVGGSGK+SL+RLAA+ AG + FEI L R Y ETEF+E+LK LYRK+   PV FLFTDAH VEEGFLE +NN+LTTG+VP LF++DE +QL ATVR
Sbjct: 2756 RLFDVIVEKLPPTPSKFHYIFNLRDLGRVCEGVCMATPDRFDSSAKLVRLWRNEVQRIFCDRLTSTTDLGVVDSATAGLLNEVFPSEAPVALVDPLLFGDYADCRNRL------GGGGGEDLRLYQDMDSYKRIQSLFEEVLETYNLDNKPMALVLFEMALEHLSRILRIIRNPLGHALLIGVGGSGKQSLSRLAAFTAGYDLFEIFLTRGYGETEFRENLKDLYRKLGKSPVVFLFTDAHAVEEGFLEFINNMLTTGIVPALFEQDEKDQLGATVR 3026          
BLAST of mRNA_P-wetherbeei_contig21281.1.1 vs. uniprot
Match: A0A1V9YMK9_9STRA (Flagellar inner arm dynein 1 heavy chain alpha n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YMK9_9STRA)

HSP 1 Score: 318 bits (816), Expect = 7.800e-96
Identity = 164/277 (59.21%), Postives = 200/277 (72.20%), Query Frame = 1
Query:    1 QVFEAMVEKLAPTPSKFHYIFNLRDLSRVFEGLCLATVDKISTAGAFVRLWRNECLRVFGDRLVGDPDAAVLAEVMAAGTRGAWPDAADAALRDPIVFGDYELAVQRLLSGGESGGGGGEDPRLYGDLGGHDDARRVFEEVLENYNLDHKPMNLVLFESALEHLTRVHRILRMPRGNALLVGVGGSGKRSLARLAAYCAGCESFEITLVRNYSETEFKEDLKSLYRKVAVGPVAFLFTDAHVVEEGFLEAVNNILTTGMVPGLFDRDEAEQLAATVR 831
            ++F+ +V+KL PTPSKFHYIFNLRDL RV EG+C+AT DK  ++   VRLWRNE  RVF DRL    D  V+   MAA     +P  A  AL DP++FGDY     RL        GGGED RLY D+  +   + +FEEVLE YNLD+KPM LVLFE ALEHL+R+ RI+R P G+ALL+GVGGSGK+SL+RLAA+ AG E FEI L R Y E EF+E+LK LYRK+   PV FLFTDAH VEEGFLE +NN+LTTG+VP LF++DE +QL A+VR
Sbjct: 2742 RLFDVIVDKLPPTPSKFHYIFNLRDLGRVCEGVCMATPDKFDSSAKLVRLWRNEVQRVFADRLTSTADLGVVDNAMAALLNEVFPSEAPTALVDPLLFGDYADCRNRLS-------GGGEDLRLYQDMESYKRIQSIFEEVLETYNLDNKPMALVLFEMALEHLSRILRIIRNPLGHALLIGVGGSGKQSLSRLAAFTAGYELFEIFLTRGYGEAEFRENLKDLYRKLGKTPVVFLFTDAHAVEEGFLEFINNMLTTGIVPALFEQDEKDQLGASVR 3011          
BLAST of mRNA_P-wetherbeei_contig21281.1.1 vs. uniprot
Match: A0A3R6YL83_9STRA (E3 ubiquitin-protein ligase RNF170 n=15 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6YL83_9STRA)

HSP 1 Score: 318 bits (814), Expect = 1.450e-95
Identity = 160/277 (57.76%), Postives = 199/277 (71.84%), Query Frame = 1
Query:    1 QVFEAMVEKLAPTPSKFHYIFNLRDLSRVFEGLCLATVDKISTAGAFVRLWRNECLRVFGDRLVGDPDAAVLAEVMAAGTRGAWPDAADAALRDPIVFGDYELAVQRLLSGGESGGGGGEDPRLYGDLGGHDDARRVFEEVLENYNLDHKPMNLVLFESALEHLTRVHRILRMPRGNALLVGVGGSGKRSLARLAAYCAGCESFEITLVRNYSETEFKEDLKSLYRKVAVGPVAFLFTDAHVVEEGFLEAVNNILTTGMVPGLFDRDEAEQLAATVR 831
            ++F+ +VEKL PTPSKFHYIFNLRDL RV EG+C+AT DK  T    VRLWRNE LR+F DRL G  D A +   ++   +  +P  ADA L +P ++GDY     RL S GE       D RLY D+  +   R +F+EVLE YNLD+KPM LVLFE ALEHL+R+ RI+R P G+ALL+GVGGSGK+SL+RLA + AG + FEI L R Y E EF+E+LK LYRK+   PV FLFTDAH VEEGFLE +NN+LTTGMVP LF++DE +QL A++R
Sbjct: 2925 RLFDVIVEKLPPTPSKFHYIFNLRDLGRVCEGVCMATTDKYDTPSKLVRLWRNEVLRIFSDRLTGTADIATVDAALSTLVKDTFPAEADAVLVNPSIYGDYMDCRNRLTSAGE-------DLRLYQDMDSYKRIRSIFDEVLETYNLDNKPMTLVLFEMALEHLSRILRIIRNPLGHALLIGVGGSGKQSLSRLATFTAGYDLFEIFLTRGYGEAEFRENLKDLYRKLGKTPVVFLFTDAHAVEEGFLEFINNMLTTGMVPALFEQDEKDQLGASIR 3194          
BLAST of mRNA_P-wetherbeei_contig21281.1.1 vs. uniprot
Match: A0A067CEJ5_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CEJ5_SAPPC)

HSP 1 Score: 317 bits (813), Expect = 1.970e-95
Identity = 162/275 (58.91%), Postives = 199/275 (72.36%), Query Frame = 1
Query:    1 QVFEAMVEKLAPTPSKFHYIFNLRDLSRVFEGLCLATVDKISTAGAFVRLWRNECLRVFGDRLVGDPDAAVLAEVMAAGTRGAWPDAADAALRDPIVFGDYELAVQRLLSGGESGGGGGEDPRLYGDLGGHDDARRVFEEVLENYNLDHKPMNLVLFESALEHLTRVHRILRMPRGNALLVGVGGSGKRSLARLAAYCAGCESFEITLVRNYSETEFKEDLKSLYRKVAVGPVAFLFTDAHVVEEGFLEAVNNILTTGMVPGLFDRDEAEQLAAT 825
            ++F+ +VEKL PTPSKFHYIFNLRDL RV EG+C+AT DK  ++   VRLWRNE  R+F DRL    D  V+    A+     +P  A  AL DP++FGDY     RL      GGGGGED RLY D+  +   + +FEEVLE YNLD+KPM LVLFE ALEHL+R+ RI+R P G+ALL+GVGGSGK+SL+RLAA+ AG + FEI L R Y E EF+E+LK LYRK+   PV FLFTDAH VEEGFLE +NN+LTTG+VP LF++DE +QL AT
Sbjct: 2752 RLFDVIVEKLPPTPSKFHYIFNLRDLGRVCEGVCMATPDKFDSSAKLVRLWRNEVQRIFCDRLTSTTDLGVVETATASLLNEVFPSEAPVALVDPLLFGDYADCRNRL------GGGGGEDLRLYQDMDSYKRIQSIFEEVLETYNLDNKPMALVLFEMALEHLSRILRIIRNPLGHALLIGVGGSGKQSLSRLAAFTAGYDLFEIFLTRGYGEAEFRENLKDLYRKLGKSPVVFLFTDAHAVEEGFLEFINNMLTTGIVPALFEQDEKDQLGAT 3020          
BLAST of mRNA_P-wetherbeei_contig21281.1.1 vs. uniprot
Match: A0A1V9Y892_9STRA (Dynein heavy chain (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y892_9STRA)

HSP 1 Score: 315 bits (808), Expect = 9.010e-95
Identity = 159/277 (57.40%), Postives = 197/277 (71.12%), Query Frame = 1
Query:    1 QVFEAMVEKLAPTPSKFHYIFNLRDLSRVFEGLCLATVDKISTAGAFVRLWRNECLRVFGDRLVGDPDAAVLAEVMAAGTRGAWPDAADAALRDPIVFGDYELAVQRLLSGGESGGGGGEDPRLYGDLGGHDDARRVFEEVLENYNLDHKPMNLVLFESALEHLTRVHRILRMPRGNALLVGVGGSGKRSLARLAAYCAGCESFEITLVRNYSETEFKEDLKSLYRKVAVGPVAFLFTDAHVVEEGFLEAVNNILTTGMVPGLFDRDEAEQLAATVR 831
            ++F+ ++EKL P PSKFHYIFNLRDL RV EG+CLAT DK  +    VRLWRNE  R+F DRL    D AV+   M    +  +P  A+AAL +P++FGDY     RL        G GED RLY D+  +   + +FEEVLE YNLD+KPM LVLFE ALEHL+R+ RI+R P G+ALL+GVGGSGK+SL+RLA + AG E FEI L R Y E EF+E+LK LYRK+   PV FLFTDAH VEEGFLE +NN+LTTG+VP LF++DE + L A+VR
Sbjct: 1074 RLFDVILEKLPPAPSKFHYIFNLRDLGRVCEGICLATTDKFDSGSKLVRLWRNEVTRIFSDRLTSQTDIAVVDSAMTGLIKEVFPSEAEAALVNPLIFGDYNDCRNRLS-------GSGEDLRLYQDMESYKRIQSIFEEVLETYNLDNKPMTLVLFEMALEHLSRILRIIRNPLGHALLIGVGGSGKQSLSRLATFTAGYELFEIFLTRGYGEAEFRENLKDLYRKLGKNPVVFLFTDAHAVEEGFLEFINNMLTTGIVPALFEQDEKDSLGASVR 1343          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21281.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMK5_ECTSI5.800e-11464.98Dynein-1-alpha heavy chain n=2 Tax=Ectocarpus TaxI... [more]
A0A482UKB5_9ARCH9.110e-10761.37Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
A0A836CGZ2_9STRA1.770e-10158.88Dynein heavy chain and region D6 of dynein motor-d... [more]
A0A7S2D309_9STRA5.090e-10158.12Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
F0YN37_AURAN1.030e-9758.48Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
T0QFT1_SAPDV1.660e-9659.21Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A1V9YMK9_9STRA7.800e-9659.21Flagellar inner arm dynein 1 heavy chain alpha n=1... [more]
A0A3R6YL83_9STRA1.450e-9557.76E3 ubiquitin-protein ligase RNF170 n=15 Tax=Aphano... [more]
A0A067CEJ5_SAPPC1.970e-9558.91Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A1V9Y892_9STRA9.010e-9557.40Dynein heavy chain (Fragment) n=1 Tax=Thraustothec... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig21281contigP-wetherbeei_contig21281:2..832 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FMK5
Preferred nameDNAH10
PFAMsAAA_5,AAA_6,AAA_7,AAA_8,AAA_9,DHC_N1,DHC_N2,Dynein_heavy,MT
Model size831
Max annot lvl2759|Eukaryota
KEGG koko:K10408
KEGG Pathwayko05016,map05016
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0001539,GO:0001578,GO:0003341,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005858,GO:0005875,GO:0005929,GO:0005930,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0008017,GO:0008092,GO:0008150,GO:0008569,GO:0009987,GO:0015630,GO:0015631,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0030030,GO:0030031,GO:0030286,GO:0031514,GO:0032838,GO:0032991,GO:0034622,GO:0035082,GO:0036156,GO:0036159,GO:0040011,GO:0042623,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044463,GO:0044464,GO:0044782,GO:0045503,GO:0045505,GO:0048870,GO:0051179,GO:0051674,GO:0051959,GO:0060271,GO:0060285,GO:0060294,GO:0065003,GO:0070286,GO:0070925,GO:0071840,GO:0097014,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1902494,GO:1990939
Exons1
Evalue3.67e-114
EggNOG OGsCOG5245@1|root,KOG3595@2759|Eukaryota
Descriptiondynein light chain binding
Cds size816
COG categoryZ
BRITEko00000,ko00001,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186220.7603269-CDS-P-wetherbeei_contig21281:1..8171683186220.7603269-CDS-P-wetherbeei_contig21281:1..817Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig21281 2..817 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186220.7707596-UTR-P-wetherbeei_contig21281:817..8321683186220.7707596-UTR-P-wetherbeei_contig21281:817..832Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig21281 818..832 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig21281.1.1prot_P-wetherbeei_contig21281.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig21281 2..817 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig21281.1.1

>prot_P-wetherbeei_contig21281.1.1 ID=prot_P-wetherbeei_contig21281.1.1|Name=mRNA_P-wetherbeei_contig21281.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=272bp
MVEKLAPTPSKFHYIFNLRDLSRVFEGLCLATVDKISTAGAFVRLWRNEC
LRVFGDRLVGDPDAAVLAEVMAAGTRGAWPDAADAALRDPIVFGDYELAV
QRLLSGGESGGGGGEDPRLYGDLGGHDDARRVFEEVLENYNLDHKPMNLV
LFESALEHLTRVHRILRMPRGNALLVGVGGSGKRSLARLAAYCAGCESFE
ITLVRNYSETEFKEDLKSLYRKVAVGPVAFLFTDAHVVEEGFLEAVNNIL
TTGMVPGLFDRDEAEQLAATVR
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mRNA from alignment at P-wetherbeei_contig21281:2..832-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig21281.1.1 ID=mRNA_P-wetherbeei_contig21281.1.1|Name=mRNA_P-wetherbeei_contig21281.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=831bp|location=Sequence derived from alignment at P-wetherbeei_contig21281:2..832- (Phaeothamnion wetherbeei SAG_119_79)
CAGGTGTTCGAGGCGATGGTGGAAAAGCTGGCGCCGACTCCCTCCAAATT CCACTACATCTTCAACCTCCGCGACCTCTCTCGCGTCTTCGAAGGGCTCT GCCTCGCCACCGTCGACAAAATCTCCACCGCTGGCGCCTTCGTCCGCCTC TGGCGCAACGAGTGCCTCCGTGTCTTCGGCGACCGTCTTGTTGGCGACCC CGATGCAGCCGTGCTCGCGGAAGTGATGGCGGCGGGAACGCGCGGCGCGT GGCCCGACGCCGCTGATGCCGCGCTGCGTGACCCGATTGTATTCGGTGAC TACGAGCTCGCGGTACAACGGCTGTTGAGTGGCGGCGAAAGCGGCGGCGG CGGCGGGGAGGACCCGCGGCTGTACGGCGACCTGGGTGGGCACGACGACG CGCGGCGTGTATTCGAGGAAGTCCTCGAAAACTACAATCTCGACCACAAG CCCATGAACCTCGTGCTGTTCGAATCGGCGCTGGAGCACCTGACGCGCGT GCACAGAATTCTGCGGATGCCGCGCGGCAACGCGCTGCTGGTCGGCGTCG GCGGCTCGGGCAAGCGGTCGCTGGCGCGGCTAGCCGCCTATTGCGCCGGC TGCGAATCGTTCGAAATCACCCTGGTGCGCAACTACAGCGAGACGGAGTT TAAAGAAGACCTCAAGAGCCTCTACCGGAAGGTCGCGGTGGGTCCGGTCG CCTTCCTGTTCACGGATGCGCACGTGGTGGAAGAGGGCTTTCTGGAGGCC GTCAACAACATCTTGACGACCGGAATGGTTCCGGGGCTGTTCGACCGTGA TGAGGCCGAGCAGCTGGCGGCGACGGTCCGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig21281:2..832-

>mRNA_P-wetherbeei_contig21281.1.1 ID=mRNA_P-wetherbeei_contig21281.1.1|Name=mRNA_P-wetherbeei_contig21281.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=816bp|location=Sequence derived from alignment at P-wetherbeei_contig21281:2..832- (Phaeothamnion wetherbeei SAG_119_79)
ATGGTGGAAAAGCTGGCGCCGACTCCCTCCAAATTCCACTACATCTTCAA
CCTCCGCGACCTCTCTCGCGTCTTCGAAGGGCTCTGCCTCGCCACCGTCG
ACAAAATCTCCACCGCTGGCGCCTTCGTCCGCCTCTGGCGCAACGAGTGC
CTCCGTGTCTTCGGCGACCGTCTTGTTGGCGACCCCGATGCAGCCGTGCT
CGCGGAAGTGATGGCGGCGGGAACGCGCGGCGCGTGGCCCGACGCCGCTG
ATGCCGCGCTGCGTGACCCGATTGTATTCGGTGACTACGAGCTCGCGGTA
CAACGGCTGTTGAGTGGCGGCGAAAGCGGCGGCGGCGGCGGGGAGGACCC
GCGGCTGTACGGCGACCTGGGTGGGCACGACGACGCGCGGCGTGTATTCG
AGGAAGTCCTCGAAAACTACAATCTCGACCACAAGCCCATGAACCTCGTG
CTGTTCGAATCGGCGCTGGAGCACCTGACGCGCGTGCACAGAATTCTGCG
GATGCCGCGCGGCAACGCGCTGCTGGTCGGCGTCGGCGGCTCGGGCAAGC
GGTCGCTGGCGCGGCTAGCCGCCTATTGCGCCGGCTGCGAATCGTTCGAA
ATCACCCTGGTGCGCAACTACAGCGAGACGGAGTTTAAAGAAGACCTCAA
GAGCCTCTACCGGAAGGTCGCGGTGGGTCCGGTCGCCTTCCTGTTCACGG
ATGCGCACGTGGTGGAAGAGGGCTTTCTGGAGGCCGTCAACAACATCTTG
ACGACCGGAATGGTTCCGGGGCTGTTCGACCGTGATGAGGCCGAGCAGCT
GGCGGCGACGGTCCGG
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