mRNA_P-wetherbeei_contig21266.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig21266.1.1
Unique NamemRNA_P-wetherbeei_contig21266.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig21266.1.1 vs. uniprot
Match: UPI00192BAA79 (ATP-binding protein n=1 Tax=Skermanella mucosa TaxID=1789672 RepID=UPI00192BAA79)

HSP 1 Score: 324 bits (830), Expect = 4.720e-103
Identity = 187/398 (46.98%), Postives = 255/398 (64.07%), Query Frame = 1
Query:    1 MPARVSAWVVDAEGKPVFATHDRSMSP--VGDRPYFQELKSGKQELLVTPLIVGRISGENIFLIGRRIERKGAFAGAVLIAVPVSAMSDFLQSLELGAGSTVSVFRTDGWLVARYPPPDQPMNLANYVLFTEHLPRSPTGSYDA-ISPADRVARIVGYRKIDQEPLVALASI---AVASHFAPFWDQLRFGLALLGFLVLTLAFVTYALFRALGREEHNRKELKDALGRNTLLLQEIHHRVKNNLQAVAAFIQLSPLDAESKLAMNLRLAAMTAIHEQAYRKDEYAVVSLQSYLSQLIKNLRTSYGSDIDITSDLQAMEVDRDQALPVGLITNEVLSNAFKHAFPTNKRGVIHVGLSMIGDRQAELVIRDNGVGHDSTKPSSGIGARLIRGLVDQLGG 1176
            +P  V  WV DA+G  V  T +  + P  +GDR YF  LK+G  E  +  L+ GR +   +F IGRRIER G F GA +I VP   ++ F +S++LG GSTV + R DGWLVAR+P P+  +NLANYVLFTEHLP++P GSY+A  SPAD  ARIVGYR++D  PLV +  I   A+A  F     ++    A +G     L  V+  + R L +EE  R  L  AL  N +LL+E+HHRVKNNLQ V++ IQL P D E K  +  R+AAM+A+HE  Y  D++  + +  Y+ +L+  LR  YGS + +  DL+ ++V  DQALP+GLI NEV+SNAFKHAFP  + G+I V L    D +A L +RD+GVG+   + ++G+G+RLIRGLV Q+ G
Sbjct:  112 LPGAVHVWVFDADGNSVL-TDEPELGPARIGDRDYFLALKTGT-EWHIGALVNGRRTTRKVFPIGRRIERGGEFLGAAVIYVPADLLAQFWRSMDLGPGSTVGLLRDDGWLVARFPVPESSLNLANYVLFTEHLPKAPEGSYEAEASPADGRARIVGYRRVDGLPLVTVVGIPSSALAEGFRGRLGEIALVAAPIG---AALLLVSLWVVRLLRQEERARDALAAALEDNRMLLREVHHRVKNNLQTVSSLIQLQPGDREGKDDLMRRIAAMSAVHEHIYGSDQFGHLDIADYIRRLVGGLRDGYGSAVRVQCDLEPVKVSPDQALPLGLIVNEVVSNAFKHAFPDGRPGLITVTLKAEDDGRALLRVRDDGVGYQPGR-ATGMGSRLIRGLVHQIEG 503          
BLAST of mRNA_P-wetherbeei_contig21266.1.1 vs. uniprot
Match: UPI00193138E5 (ATP-binding protein n=2 Tax=Skermanella TaxID=204447 RepID=UPI00193138E5)

HSP 1 Score: 321 bits (823), Expect = 3.760e-102
Identity = 178/395 (45.06%), Postives = 250/395 (63.29%), Query Frame = 1
Query:    1 MPARVSAWVVDAEGKPVFATHDRSMSP--VGDRPYFQELKSGKQELLVTPLIVGRISGENIFLIGRRIERKGAFAGAVLIAVPVSAMSDFLQSLELGAGSTVSVFRTDGWLVARYPPPDQPMNLANYVLFTEHLPRSPTGSYDA-ISPADRVARIVGYRKIDQEPLVALASIAVASHFAPFWDQLRFGLALLGFLVLTLAFVTYALFRALGREEHNRKELKDALGRNTLLLQEIHHRVKNNLQAVAAFIQLSPLDAESKLAMNLRLAAMTAIHEQAYRKDEYAVVSLQSYLSQLIKNLRTSYGSDIDITSDLQAMEVDRDQALPVGLITNEVLSNAFKHAFPTNKRGVIHVGLSMIGDRQAELVIRDNGVGHDSTKPSSGIGARLIRGLVDQLGG 1176
            +P  V  WV D +G  V  T +  ++P  +GDR YFQ LK+G +  + T L+ GR +   +F IGRRIER G F GA +I VP   ++ F QS++LG GSTV + R DGWLVAR+P P++ +NLA+Y LFTEHLP++  GSY+A  SPAD   RIVGYR+++  PLV +  I  +      W +L     +       L  V+  + + L +EE  R  L  AL  N +LL+E+HHRVKNNLQ V++ IQL P D + K  +  R+AAMTA+HE  Y  D++  + L  Y+ +L+  L   YGS++ +  DL+ + V  DQALP+GL+ NEV+SNAFKHAFP  + G+I V L+  G   A L +RD+GVG+   +  +G+G+RLI+GLV Q+GG
Sbjct:  111 LPGAVHVWVFDVDGNAVL-TDEPELAPASIGDRDYFQALKAGAEWHIGT-LVNGRRTARKVFPIGRRIERGGQFLGAAVIYVPADLLAQFWQSMDLGPGSTVGLLRDDGWLVARFPVPERTLNLADYALFTEHLPKAAEGSYEAPASPADGRPRIVGYRRVEGLPLVTVIGIPTSVLTEDLWSRLGEIALMAALFGGALLLVSLWVVKLLRQEERARDALAVALEENRMLLREVHHRVKNNLQTVSSLIQLQPGDPQGKSELMRRIAAMTAVHEHIYGSDQFGQLDLADYVRRLVAGLCDGYGSEVKVQCDLEPVTVGADQALPLGLVVNEVVSNAFKHAFPNGRAGLITVTLTPEGGDHAVLRVRDDGVGYQPGR-RAGMGSRLIQGLVQQIGG 502          
BLAST of mRNA_P-wetherbeei_contig21266.1.1 vs. uniprot
Match: UPI000419752A (ATP-binding protein n=1 Tax=Azospirillum halopraeferens TaxID=34010 RepID=UPI000419752A)

HSP 1 Score: 317 bits (812), Expect = 1.160e-100
Identity = 182/395 (46.08%), Postives = 249/395 (63.04%), Query Frame = 1
Query:    1 MPARVSAWVVDAEGKPVFATHDRSMSPVG--DRPYFQELKSGKQELLVTPLIVGRISGENIFLIGRRIERKGAFAGAVLIAVPVSAMSDFLQSLELGAGSTVSVFRTDGWLVARYPPPDQPMNLANYVLFTEHLPRSPTGSYDAI-SPADRVARIVGYRKIDQEPLVALASIAVASHFAPFWDQLRFGLALLGFLVLTLAFVTYALFRALGREEHNRKELKDALGRNTLLLQEIHHRVKNNLQAVAAFIQLSPLDAESKLAMNLRLAAMTAIHEQAYRKDEYAVVSLQSYLSQLIKNLRTSYGSDIDITSDLQAMEVDRDQALPVGLITNEVLSNAFKHAFPTNKRGVIHVGLSMIGDRQAELVIRDNGVGHDSTKPSSGIGARLIRGLVDQLGG 1176
            +P  V  WV DA G  V + ++  + P    DR YF+ L+ G QE  + PL+VG +SG  IF IG R+ER G FAGAV++ VP   +++F +S++LG GSTV + R DGWLVAR+P PD+ ++L+ YVLFT +LP SP G Y+A  SPAD V+R+VGYR++D  PLVA+  I  ++  A    ++     +L  + L L  V+  + R L REEH R+ L  AL  N +LL+E+HHRVKNNLQ V+A +QL P  AE K  +  R+AAM A+HE  Y  D +  V +  Y+  L+  LR  YGS   +   L  + VD D+ALP+GLI NEV+SNAFKHAFP  + G I V L  +    A L + D+GVG+ +    SG+G+RLIR L  Q+GG
Sbjct:   94 LPGAVPIWVFDANGDSVLS-NEPQLGPANAADRSYFRALRDG-QEWHIGPLLVGALSGRKIFPIGHRLERDGRFAGAVVVFVPADPLAEFWESMQLGPGSTVGLLRDDGWLVARHPVPDRAVDLSGYVLFTRYLPESPHGVYEAAASPADGVSRLVGYRRVDGLPLVAVVGIPASTLAASARQRMGEVGLILAPVGLGLLLVSVWVVRLLRREEHIRRALSGALEDNRVLLREVHHRVKNNLQTVSALVQLQPGPAEGKEDLMRRIAAMAAVHEHIYGSDRFDGVDVAEYVRTLVMRLREGYGSAAAVHCALDPVAVDPDKALPLGLIVNEVVSNAFKHAFPDGRDGSISVTLQAVPGGPAVLRVHDDGVGY-TPDGGSGMGSRLIRSLAAQIGG 485          
BLAST of mRNA_P-wetherbeei_contig21266.1.1 vs. uniprot
Match: A0A1A9GAR1_SHIS7 (Histidine kinase domain-containing protein n=6 Tax=Shinella TaxID=323620 RepID=A0A1A9GAR1_SHIS7)

HSP 1 Score: 306 bits (783), Expect = 1.410e-96
Identity = 162/394 (41.12%), Postives = 251/394 (63.71%), Query Frame = 1
Query:    1 MPARVSAWVVDAEGKPVFATHDRSMSPVG--DRPYFQELKSGKQELLVTPLIVGRISGENIFLIGRRIERKGAFAGAVLIAVPVSAMSDFLQSLELGAGSTVSVFRTDGWLVARYPPPDQPMNLANYVLFTEHLPRSPTGSYDAISPADRVARIVGYRKIDQEPLVALASIAVASHFAPFWDQLRFGLALLGFLVLTLAFVTYALFRALGREEHNRKELKDALGRNTLLLQEIHHRVKNNLQAVAAFIQLSPLDAESKLAMNLRLAAMTAIHEQAYRKDEYAVVSLQSYLSQLIKNLRTSYGSDIDITSDLQAMEVDRDQALPVGLITNEVLSNAFKHAFPTNKRGVIHVGLSMIGDRQAELVIRDNGVGHDSTKPSSGIGARLIRGLVDQLGG 1176
            +P +V A+VVD  G  +++T D  + P+   DRPYF EL  G ++  ++ L++ R++GE IF   RR+ER G FAGA +++  V  ++D  ++++LG  STVS  R+DG LVARYP  D P++++ YVLFT++LP++P G+YDAISP D   RIV YR +D   L+ALAS         FW  +   +++L    ++L      +     R+    + LK+AL  N LLL+EIHHRVKNNLQAV + IQL  L A+ + ++  R+++M A+HEQ YR DE++ +  +  ++ +++ L  +YG+ + +  D+  + +  D A P+ L+T+E+L+N  K+AFP  + G I + L  IG+R+A L +RDNGVG D      G+G+RLIRG+V+QL G
Sbjct:   83 LPGQVKAYVVDDTGLTLYST-DPMVKPISIVDRPYFSELAKGAKQH-ISSLLISRLNGEQIFAFSRRLERNGRFAGAAVVSFEVKVLADVWEAVDLGPNSTVSFARSDGQLVARYPLADGPLDMSKYVLFTDYLPKAPDGTYDAISPVDGAHRIVAYRTVDGTGLIALASADHDFGIQRFWRDVTVAISVLILASVSLLAAGQWIRHLRQRDAAQSQLLKNALADNQLLLREIHHRVKNNLQAVQSIIQLQRLPADVQQSLADRISSMVAVHEQIYRHDEFSRLCARDLVASVVEKLVNAYGASVAVDYDIDELAISTDNATPLALLTSELLTNILKYAFPDGREGRISIALKAIGERRARLTVRDNGVGFDPQTMRQGMGSRLIRGVVNQLNG 474          
BLAST of mRNA_P-wetherbeei_contig21266.1.1 vs. uniprot
Match: UPI001D0238D9 (hypothetical protein n=1 Tax=Kinneretia sp. XES5 TaxID=2877940 RepID=UPI001D0238D9)

HSP 1 Score: 301 bits (771), Expect = 1.430e-94
Identity = 159/394 (40.36%), Postives = 248/394 (62.94%), Query Frame = 1
Query:    1 MPARVSAWVVDAEGKPVFATHDRSMSPVG--DRPYFQELKSGKQELLVTPLIVGRISGENIFLIGRRIERKGAFAGAVLIAVPVSAMSDFLQSLELGAGSTVSVFRTDGWLVARYPPPDQPMNLANYVLFTEHLPRSPTGSYDAISPADRVARIVGYRKIDQEPLVALASIAVASHFAPFWDQLRFGLALLGFLVLTLAFVTYALFRALGREEHNRKELKDALGRNTLLLQEIHHRVKNNLQAVAAFIQLSPLDAESKLAMNLRLAAMTAIHEQAYRKDEYAVVSLQSYLSQLIKNLRTSYGSDIDITSDLQAMEVDRDQALPVGLITNEVLSNAFKHAFPTNKRGVIHVGLSMIGDRQAELVIRDNGVGHDSTKPSSGIGARLIRGLVDQLGG 1176
            +P +V A+VVD +G  +++T D  + P+   DRPYF EL  G ++  ++ L++ R++G  IF   RR+ER G FAGA +++  V+ ++D  ++++LG  STVS  R DG LVARYP  D P++++ YVLFT++LP++  G+Y+AISP D   RIV YR +D   LVALAS   A     FW  +   +++L    + L      +   L R+    + L++AL  N LLL+E+HHRVKNNLQAV + IQL  L AE + ++  R+++M A+HEQ YR DE++ +  +  +  +++ + T+YG+ + +  D+  + V  D A P+ L+T+EVL+N  K+AFP  + G + + L  +  R+A L I+DNG+G D      G+G+RLIRG+V QL G
Sbjct:  100 LPGQVKAYVVDEKGLTLYST-DPMVKPISIVDRPYFSELAKGAKQH-ISSLLISRLNGHQIFAFSRRLERDGKFAGAAVVSFDVNVLADVWEAVDLGPNSTVSFIRADGQLVARYPLADGPVDMSKYVLFTDYLPKAAAGTYEAISPIDGAHRIVAYRTVDGTGLVALASADYAFGIQRFWRDVTVAVSVLVLAGIGLLAAGQWIRHLLHRDAAQSQLLRNALADNQLLLREVHHRVKNNLQAVQSIIQLQRLPAEIQQSLADRISSMVAVHEQIYRHDEFSRLCARDLIKSVVEKMVTAYGAPVAVDYDIDELAVSTDNATPLALLTSEVLTNILKYAFPDGREGRVSIALKAVSGRRARLTIKDNGIGFDPQTARQGMGSRLIRGVVGQLNG 491          
BLAST of mRNA_P-wetherbeei_contig21266.1.1 vs. uniprot
Match: UPI001FD20684 (ATP-binding protein n=1 Tax=Shinella yambaruensis TaxID=415996 RepID=UPI001FD20684)

HSP 1 Score: 300 bits (768), Expect = 4.030e-94
Identity = 161/394 (40.86%), Postives = 250/394 (63.45%), Query Frame = 1
Query:    1 MPARVSAWVVDAEGKPVFATHDRSMSPVG--DRPYFQELKSGKQELLVTPLIVGRISGENIFLIGRRIERKGAFAGAVLIAVPVSAMSDFLQSLELGAGSTVSVFRTDGWLVARYPPPDQPMNLANYVLFTEHLPRSPTGSYDAISPADRVARIVGYRKIDQEPLVALASIAVASHFAPFWDQLRFGLALLGFLVLTLAFVTYALFRALGREEHNRKELKDALGRNTLLLQEIHHRVKNNLQAVAAFIQLSPLDAESKLAMNLRLAAMTAIHEQAYRKDEYAVVSLQSYLSQLIKNLRTSYGSDIDITSDLQAMEVDRDQALPVGLITNEVLSNAFKHAFPTNKRGVIHVGLSMIGDRQAELVIRDNGVGHDSTKPSSGIGARLIRGLVDQLGG 1176
            +P +V A+VVD EG  +++T D  + P+   DRPYF EL  G ++  V+ L++ R++GE IF   RR+ER G FAGA +++  V  ++D  ++++LG  STVS  R+DG LVARYP  D P++++ YVLFT++LP++PTG+YDAISP D   RIV YR +D    +ALAS         F   +   +A+L    ++L      +     R+    + L++AL  N LLL+E+HHRVKNNLQAV + IQL  L  E + ++  R+++M A+HE+ YR DE++ +S +  L+ +++ L  +YG+ + +T ++  + V  D A P+ L+ NE+L+N  K+AFP  + G I + L+ IG R+A L + D+G+G D      G+G+RLIRG+V+QL G
Sbjct:  100 LPGQVKAYVVDGEGLTLYST-DPMVKPISIVDRPYFSELAKGAKQH-VSSLLISRLNGEQIFAFSRRLERNGRFAGAAVVSFEVRVLADVWEAVDLGPNSTVSFARSDGQLVARYPLADGPLDMSKYVLFTDYLPKAPTGTYDAISPVDGAHRIVAYRTVDGARFIALASADYDFGIQRFRRDVTVAIAVLILASVSLLAAGQWIRHLRQRDAAQSQLLRNALADNQLLLREVHHRVKNNLQAVQSIIQLQRLPDEVQQSLVDRISSMVAVHEKIYRHDEFSRLSARDLLTSVVEKLMAAYGAPVTVTYEIDDLAVSTDNATPLALLVNELLTNILKYAFPDGRAGRISIVLTAIGGRRARLTVHDDGIGFDPQAVKQGMGSRLIRGVVNQLNG 491          
BLAST of mRNA_P-wetherbeei_contig21266.1.1 vs. uniprot
Match: UPI000F8EA53B (ATP-binding protein n=1 Tax=Pelagibacterium montanilacus TaxID=2185280 RepID=UPI000F8EA53B)

HSP 1 Score: 300 bits (767), Expect = 6.550e-94
Identity = 162/367 (44.14%), Postives = 233/367 (63.49%), Query Frame = 1
Query:   82 VGDRPYFQELKSGKQELLVTPLIVGRISGENIFLIGRRIERKGAFAGAVLIAVPVSAMSDFLQSLELGAGSTVSVFRTDGWLVARYPPPDQPMNLANYVLFTEHLPRSPT-GSYDA-ISPADRVARIVGYRKIDQEPLVALASIAVASHFAPFWDQLRFGLALLGFLVLTLAFVTYALFRALGREEHNRKELKDALGRNTLLLQEIHHRVKNNLQAVAAFIQLSPLDAESKLAMNLRLAAMTAIHEQAYRKDEYAVVSLQSYLSQLIKNLRTSYGSDIDITSDLQAMEVDRDQALPVGLITNEVLSNAFKHAFPTNKRGVIHVGLSMIGDRQAELVIRDNGVGHDSTKPSSGIGARLIRGLVDQLGG 1176
            V +  +F  L  G Q L ++P +     G + F++ RR+E+ GAF+G   + +  + +SDF QSL L  GST+S+ R DGWLVAR+P PD   +LANY LFT HL  +P  G+Y A  SP D VAR V YR +   PL+A+++I+  +    FW      L L+G + + L  V + L+RA  R++  ++ L  AL RN LL +EIHHRVKNNLQA+++ +Q+ P+ AE+K  M  R+AAM A+HE  YR D++    +  Y+ +L++++  S+ ++I +   ++ + V RD A+P+GLI NEVLSNAFK+AF   + G IHV L  I   QA+L I D+GVG D   PS+GIG RLIRGL  Q+GG
Sbjct:  125 VSESAFFVALAQG-QTLHISPFLTMSAGGAHAFVVARRLEQDGAFSGIATVTISNAMLSDFAQSLALDNGSTMSLVRDDGWLVARHPAPDTATSLANYELFTTHLVENPEEGTYVAQASPIDGVARTVAYRAVPGLPLIAVSAISTDAIVDRFWRNATLVLWLIGPIGIMLLIVAFLLWRAARRDQRTQERLSHALDRNQLLFREIHHRVKNNLQAISSLVQMQPIPAEAKQEMARRVAAMVAVHEHIYRHDQFERTEVSEYIDKLVRDIAASFHAEIALDIGVEPVVVHRDNAMPLGLIVNEVLSNAFKYAFRDREPGTIHVSLERIDADQAQLTISDDGVGFDPDAPSTGIGQRLIRGLAQQIGG 490          
BLAST of mRNA_P-wetherbeei_contig21266.1.1 vs. uniprot
Match: UPI001FD3FF1E (sensor histidine kinase n=1 Tax=Shinella curvata TaxID=1817964 RepID=UPI001FD3FF1E)

HSP 1 Score: 298 bits (764), Expect = 1.240e-93
Identity = 156/394 (39.59%), Postives = 246/394 (62.44%), Query Frame = 1
Query:    1 MPARVSAWVVDAEGKPVFATHDRSMSPVG--DRPYFQELKSGKQELLVTPLIVGRISGENIFLIGRRIERKGAFAGAVLIAVPVSAMSDFLQSLELGAGSTVSVFRTDGWLVARYPPPDQPMNLANYVLFTEHLPRSPTGSYDAISPADRVARIVGYRKIDQEPLVALASIAVASHFAPFWDQLRFGLALLGFLVLTLAFVTYALFRALGREEHNRKELKDALGRNTLLLQEIHHRVKNNLQAVAAFIQLSPLDAESKLAMNLRLAAMTAIHEQAYRKDEYAVVSLQSYLSQLIKNLRTSYGSDIDITSDLQAMEVDRDQALPVGLITNEVLSNAFKHAFPTNKRGVIHVGLSMIGDRQAELVIRDNGVGHDSTKPSSGIGARLIRGLVDQLGG 1176
            +P +V+A+VVD  G  +++T D  + P+   DRPYF EL  G  +  ++ L++ R++GE IF   RR+ER G FAGA +++  V  ++D  ++++LG  STVS  R DG LVARYP  D P++++ YVLFT++LP+S TG+Y+A+SP D   R+V YR +D   L+ALAS         FW  +   +++L    ++L      +     R+    + L++AL  N LLL+EIHHRVKNNLQAV + IQL  L  E++ +++ R+++M A+HEQ YR DE++ +  Q  +  +++ L  +YGS + +  D+  + +  D A P+ L+ +E+L+N  K+AF   + G   + L  IG+R+A L + DNGVG D      G+G+RLI+G+V+QL G
Sbjct:   84 LPGQVNAYVVDEAGLTLYST-DPMIKPISIVDRPYFSELAKGANQH-ISSLLISRLNGEQIFAFSRRLERNGLFAGAAVVSFEVKVLADVWEAVDLGPNSTVSFARADGQLVARYPLADGPLDMSQYVLFTDYLPKSATGTYEAVSPVDDAHRVVAYRTVDDTGLIALASADYDFGIQRFWRDVTVAISVLVLAGVSLLAAGQWIRHLRQRDAAQSQLLRNALADNQLLLREIHHRVKNNLQAVQSIIQLQRLPVETQQSLSDRISSMVAVHEQIYRHDEFSFLCAQDLIRSVVEKLLNAYGSAVTVDYDIDEIAISTDNATPLALLVSELLTNILKYAFTDGRVGTFSIALKSIGERRARLTVHDNGVGFDPQTIQRGMGSRLIQGVVNQLNG 475          
BLAST of mRNA_P-wetherbeei_contig21266.1.1 vs. uniprot
Match: UPI0010C9C24E (ATP-binding protein n=1 Tax=Rhodoligotrophos defluvii TaxID=2561934 RepID=UPI0010C9C24E)

HSP 1 Score: 298 bits (763), Expect = 1.400e-93
Identity = 171/398 (42.96%), Postives = 240/398 (60.30%), Query Frame = 1
Query:    1 MPARVSAWVVDAEGKPVFA--THDRSMSPVGDRPYFQELKSGKQELLVTPLIVGRISGENIFLIGRRIERKGAFAGAVLIAVPVSAMSDFLQSLELGAGSTVSVFRTDGWLVARYPPPDQPMNLANYVLFTEHLPRSPTGSYDA-ISPADRVARIVGYRKIDQEPLVALASIAVASHFAPFWDQLRFGLALLGFL----VLTLAFVTYALFRALGREEHNRKELKDALGRNTLLLQEIHHRVKNNLQAVAAFIQLSPLDAESKLAMNLRLAAMTAIHEQAYRKDEYAVVSLQSYLSQLIKNLRTSYGSDIDITSDLQAMEVDRDQALPVGLITNEVLSNAFKHAFPTNKRGVIHVGLSMIGDRQAELVIRDNGVGHDSTKPSSGIGARLIRGLVDQLG 1173
            +P  V AWV D  G  V    T D  +  V D  +FQ LK+G Q   V+ LI  R +   +F+IGRR+ER G F GA  I +P   +S+F  +L LG  ST  + R+DGWLVAR+P P+  +NL NY+LFT+HL +SP GSY A  SPAD V+RIVG+  +   PL+A+A ++  +     WD+ R  +  +  +    VL L   +  +   L R E  R++L +AL +N +L QE+HHRVKNNLQ V A +Q+  L  E K  +  R+ AMTA+H+Q Y  +    + L SY+  L+ +LR S   ++ +TS L  +EV  D+A+P+GLI NEV++NAFKHAFP  + G I + L  +   +A L IRD+GVG D    S G+G RLI+GL  Q+G
Sbjct:   85 LPRDVRAWVFDVNGVTVLTNDTTDAQLR-VADTEFFQTLKAG-QTWHVSTLINDRFNKRKVFIIGRRLERNGRFVGAAAIVIPADLLSEFWSTLNLGRDSTAGLIRSDGWLVARHPVPEDTINLKNYMLFTKHLAQSPAGSYSASASPADGVSRIVGFYTVPGLPLIAIAGVSKNAV----WDRFRAQIGSVAVIAVPAVLGLLACSLWVSVLLRRYEQQRRQLAEALEQNRILFQEMHHRVKNNLQTVVALVQMHGLPGEIKRDLANRIGAMTAVHQQIYMSNRLGSLDLASYIDDLVASLRQSSPENVQVTSTLTPIEVPSDKAVPLGLIINEVMANAFKHAFPAGRPGNIAISLERLAPNKARLQIRDDGVGFDIASASQGMGNRLIQGLSRQIG 476          
BLAST of mRNA_P-wetherbeei_contig21266.1.1 vs. uniprot
Match: A0A6N8SLQ6_9HYPH (Sensor histidine kinase n=1 Tax=Shinella kummerowiae TaxID=417745 RepID=A0A6N8SLQ6_9HYPH)

HSP 1 Score: 292 bits (748), Expect = 2.530e-91
Identity = 157/394 (39.85%), Postives = 245/394 (62.18%), Query Frame = 1
Query:    1 MPARVSAWVVDAEGKPVFATHDRSMSPVG--DRPYFQELKSGKQELLVTPLIVGRISGENIFLIGRRIERKGAFAGAVLIAVPVSAMSDFLQSLELGAGSTVSVFRTDGWLVARYPPPDQPMNLANYVLFTEHLPRSPTGSYDAISPADRVARIVGYRKIDQEPLVALASIAVASHFAPFWDQLRFGLALLGFLVLTLAFVTYALFRALGREEHNRKELKDALGRNTLLLQEIHHRVKNNLQAVAAFIQLSPLDAESKLAMNLRLAAMTAIHEQAYRKDEYAVVSLQSYLSQLIKNLRTSYGSDIDITSDLQAMEVDRDQALPVGLITNEVLSNAFKHAFPTNKRGVIHVGLSMIGDRQAELVIRDNGVGHDSTKPSSGIGARLIRGLVDQLGG 1176
            +P +V A+VVD  G  +++T D  + P+   DRPYF EL  G ++  V+ L++ R++GE IF   RR+ER G FAGA +++  V  ++D  ++++LG  STVS  R DG LVARYP  D P++++ YVLFTE++P++  G+Y+AISP D   RIV YR +    L+ALAS         FW  +   +++L    ++L      +     RE    + L++AL  N LLL+EIHHRVKNNLQAV + IQ+  L  E + ++  R+++M A+HEQ YR+DE++ +  +  ++ + + L  +YG+ + +  D+  + V  D A P+ L+T+E+L+N  K+AFP  + G I + L   G+R+A LV+ D+G+G D      G+G+RLIRG+V QL G
Sbjct:   84 LPGQVKAYVVDESGLTLYST-DPMVKPISIVDRPYFSELAKGARQH-VSSLLISRLNGEQIFAFSRRLERNGRFAGAAVVSFEVKVLADVWEAVDLGPNSTVSFARADGQLVARYPLADGPLDMSKYVLFTEYIPKADAGTYEAISPLDSAHRIVAYRTVGGTGLIALASADYDFGIQRFWRDVTVAISVLILASVSLLAAGQWIRYLRQREAAQAQLLRNALADNQLLLREIHHRVKNNLQAVQSIIQMQRLAPEIQQSLTNRISSMVAVHEQIYRRDEFSRLCARDLMTSVAEKLIFAYGAPVTVDYDIDDLAVSTDNATPLALLTSELLTNILKYAFPDGRAGRISIALKGAGERRARLVVHDDGIGFDPQAIKQGMGSRLIRGVVSQLNG 475          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21266.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00192BAA794.720e-10346.98ATP-binding protein n=1 Tax=Skermanella mucosa Tax... [more]
UPI00193138E53.760e-10245.06ATP-binding protein n=2 Tax=Skermanella TaxID=2044... [more]
UPI000419752A1.160e-10046.08ATP-binding protein n=1 Tax=Azospirillum halopraef... [more]
A0A1A9GAR1_SHIS71.410e-9641.12Histidine kinase domain-containing protein n=6 Tax... [more]
UPI001D0238D91.430e-9440.36hypothetical protein n=1 Tax=Kinneretia sp. XES5 T... [more]
UPI001FD206844.030e-9440.86ATP-binding protein n=1 Tax=Shinella yambaruensis ... [more]
UPI000F8EA53B6.550e-9444.14ATP-binding protein n=1 Tax=Pelagibacterium montan... [more]
UPI001FD3FF1E1.240e-9339.59sensor histidine kinase n=1 Tax=Shinella curvata T... [more]
UPI0010C9C24E1.400e-9342.96ATP-binding protein n=1 Tax=Rhodoligotrophos deflu... [more]
A0A6N8SLQ6_9HYPH2.530e-9139.85Sensor histidine kinase n=1 Tax=Shinella kummerowi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig21266contigP-wetherbeei_contig21266:2..1177 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1121033.AUCF01000028_gene402
PFAMsHATPase_c,HATPase_c_2,HisKA_2
Model size1176
Max annot lvl204441|Rhodospirillales
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.89e-101
EggNOG OGsCOG3920@1|root,COG3920@2|Bacteria,1MVPJ@1224|Proteobacteria,2TSSQ@28211|Alphaproteobacteria,2JT51@204441|Rhodospirillales
DescriptionHistidine kinase
Cds size1176
COG categoryT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186220.4374747-CDS-P-wetherbeei_contig21266:1..11771683186220.4374747-CDS-P-wetherbeei_contig21266:1..1177Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig21266 2..1177 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig21266.1.1prot_P-wetherbeei_contig21266.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig21266 2..1177 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig21266.1.1

>prot_P-wetherbeei_contig21266.1.1 ID=prot_P-wetherbeei_contig21266.1.1|Name=mRNA_P-wetherbeei_contig21266.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=392bp
MPARVSAWVVDAEGKPVFATHDRSMSPVGDRPYFQELKSGKQELLVTPLI
VGRISGENIFLIGRRIERKGAFAGAVLIAVPVSAMSDFLQSLELGAGSTV
SVFRTDGWLVARYPPPDQPMNLANYVLFTEHLPRSPTGSYDAISPADRVA
RIVGYRKIDQEPLVALASIAVASHFAPFWDQLRFGLALLGFLVLTLAFVT
YALFRALGREEHNRKELKDALGRNTLLLQEIHHRVKNNLQAVAAFIQLSP
LDAESKLAMNLRLAAMTAIHEQAYRKDEYAVVSLQSYLSQLIKNLRTSYG
SDIDITSDLQAMEVDRDQALPVGLITNEVLSNAFKHAFPTNKRGVIHVGL
SMIGDRQAELVIRDNGVGHDSTKPSSGIGARLIRGLVDQLGG
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mRNA from alignment at P-wetherbeei_contig21266:2..1177-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig21266.1.1 ID=mRNA_P-wetherbeei_contig21266.1.1|Name=mRNA_P-wetherbeei_contig21266.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1176bp|location=Sequence derived from alignment at P-wetherbeei_contig21266:2..1177- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGGCGCGCGTTTCCGCTTGGGTGGTCGATGCGGAGGGCAAGCCCGT CTTTGCTACGCACGACCGCAGCATGTCTCCCGTCGGCGACCGACCATATT TTCAGGAATTGAAATCCGGAAAGCAGGAATTGCTCGTGACGCCGCTAATC GTCGGCCGCATCAGTGGCGAGAATATTTTTCTGATCGGCAGACGCATTGA GCGCAAAGGCGCATTCGCAGGAGCTGTGCTCATCGCGGTGCCGGTCAGCG CAATGTCGGACTTTCTGCAATCGCTCGAGCTTGGCGCGGGATCGACCGTT TCGGTGTTTCGCACGGACGGGTGGCTGGTCGCGCGATATCCGCCGCCCGA TCAGCCGATGAACCTCGCCAACTACGTGCTCTTCACCGAGCATCTGCCGC GCAGCCCAACCGGAAGTTATGATGCGATATCGCCGGCGGATCGCGTGGCG CGAATCGTCGGCTACCGAAAGATTGATCAAGAGCCGCTCGTCGCGCTGGC ATCCATTGCCGTCGCGTCGCATTTCGCGCCCTTTTGGGACCAGCTGCGCT TCGGTCTGGCGCTGCTCGGTTTTCTTGTCCTTACACTGGCTTTCGTCACC TACGCGCTTTTCCGCGCGCTTGGGCGGGAAGAGCATAATCGCAAGGAGCT GAAAGACGCACTTGGCCGGAACACGTTGCTCCTGCAGGAGATTCATCACC GTGTGAAGAATAACCTGCAAGCAGTCGCGGCCTTCATCCAACTGTCGCCG CTCGATGCCGAATCCAAGCTGGCCATGAACCTTCGCCTTGCAGCAATGAC CGCAATTCACGAGCAGGCCTATCGAAAGGACGAGTATGCCGTAGTGTCGC TGCAATCATACCTATCGCAGCTGATCAAAAATCTCCGAACGTCCTATGGA AGCGATATCGATATTACGAGTGACCTGCAGGCGATGGAAGTCGATCGCGA TCAAGCGCTGCCGGTGGGACTGATCACTAACGAGGTTCTTTCCAATGCCT TCAAGCACGCGTTTCCAACCAACAAACGCGGCGTCATTCATGTCGGCCTT AGCATGATTGGCGATCGCCAGGCCGAGCTCGTTATCCGCGATAACGGCGT CGGGCACGATTCCACCAAGCCGAGCTCCGGCATTGGCGCCAGGCTTATCC GGGGCCTAGTGGATCAGTTGGGTGGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig21266:2..1177-

>mRNA_P-wetherbeei_contig21266.1.1 ID=mRNA_P-wetherbeei_contig21266.1.1|Name=mRNA_P-wetherbeei_contig21266.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1176bp|location=Sequence derived from alignment at P-wetherbeei_contig21266:2..1177- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGGCGCGCGTTTCCGCTTGGGTGGTCGATGCGGAGGGCAAGCCCGT
CTTTGCTACGCACGACCGCAGCATGTCTCCCGTCGGCGACCGACCATATT
TTCAGGAATTGAAATCCGGAAAGCAGGAATTGCTCGTGACGCCGCTAATC
GTCGGCCGCATCAGTGGCGAGAATATTTTTCTGATCGGCAGACGCATTGA
GCGCAAAGGCGCATTCGCAGGAGCTGTGCTCATCGCGGTGCCGGTCAGCG
CAATGTCGGACTTTCTGCAATCGCTCGAGCTTGGCGCGGGATCGACCGTT
TCGGTGTTTCGCACGGACGGGTGGCTGGTCGCGCGATATCCGCCGCCCGA
TCAGCCGATGAACCTCGCCAACTACGTGCTCTTCACCGAGCATCTGCCGC
GCAGCCCAACCGGAAGTTATGATGCGATATCGCCGGCGGATCGCGTGGCG
CGAATCGTCGGCTACCGAAAGATTGATCAAGAGCCGCTCGTCGCGCTGGC
ATCCATTGCCGTCGCGTCGCATTTCGCGCCCTTTTGGGACCAGCTGCGCT
TCGGTCTGGCGCTGCTCGGTTTTCTTGTCCTTACACTGGCTTTCGTCACC
TACGCGCTTTTCCGCGCGCTTGGGCGGGAAGAGCATAATCGCAAGGAGCT
GAAAGACGCACTTGGCCGGAACACGTTGCTCCTGCAGGAGATTCATCACC
GTGTGAAGAATAACCTGCAAGCAGTCGCGGCCTTCATCCAACTGTCGCCG
CTCGATGCCGAATCCAAGCTGGCCATGAACCTTCGCCTTGCAGCAATGAC
CGCAATTCACGAGCAGGCCTATCGAAAGGACGAGTATGCCGTAGTGTCGC
TGCAATCATACCTATCGCAGCTGATCAAAAATCTCCGAACGTCCTATGGA
AGCGATATCGATATTACGAGTGACCTGCAGGCGATGGAAGTCGATCGCGA
TCAAGCGCTGCCGGTGGGACTGATCACTAACGAGGTTCTTTCCAATGCCT
TCAAGCACGCGTTTCCAACCAACAAACGCGGCGTCATTCATGTCGGCCTT
AGCATGATTGGCGATCGCCAGGCCGAGCTCGTTATCCGCGATAACGGCGT
CGGGCACGATTCCACCAAGCCGAGCTCCGGCATTGGCGCCAGGCTTATCC
GGGGCCTAGTGGATCAGTTGGGTGGG
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