mRNA_P-wetherbeei_contig21242.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig21242.1.1
Unique NamemRNA_P-wetherbeei_contig21242.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig21242.1.1 vs. uniprot
Match: A0A2W4K3W3_9PROT (C-type cytochrome biogenesis protein CcmI n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4K3W3_9PROT)

HSP 1 Score: 252 bits (643), Expect = 3.470e-77
Identity = 154/321 (47.98%), Postives = 205/321 (63.86%), Query Frame = 1
Query:    1 AMIGFLLVAALLVVIALAWVLPPLWRVRQGGAGASGEASNLAILQDGMAELERDLKSGLLQEQQYQQAREDLERRALEE-ARAGVTAPQAQPH-GRRAVAVLAIVIPLCATGLYWKLGTPEGVAWNTVPIGGEVTAQQIETMVAQLAVRLQKNPRDGNGWALLARSNFVLQRYPEAANAYARAAELIKDDADLLADYADTVAMTQNRRIDAKVMRIVDAALRIDPMQWKALAMAGSGASERGDYANAIVYWKRLQSRTEPESELGRMLTANIAEAQKLGGIKTAAKPAIPSVAGDVRGTVSLSPALAGKAGPADSVFIFPR 957
            A+  F LVAALL +IA+AW+  PL R  +  A     A+NLAIL+D +AELE DL++G L  +QY+QAR +LERR LEE A+   T  +  P  GR     +A+ +PL A  LY +LG P  +         E T +QIE MVAQLA R++ NP D  GWA+L R+ +V+QRY EAA AYA   + I  DAD LADYAD +AM Q R +  K M I+  AL +DP  WK+LAMAG+ A ERGDY  AI YW+RLQ +   +SE+GR + A++ EA++  G+  +AK A  +    V GTV L+P +A KA PAD+VF++ R
Sbjct:   51 ALTAFYLVAALLALIAVAWIAVPLVRSARA-AQPRRAAANLAILKDQLAELEADLRAGTLSAEQYEQARLELERRVLEEVAQERETEVRGHPALGRVTAIAVALAVPLGAALLYAQLGNPAAIVQQAAEPPHEFTPEQIEQMVAQLAERMRANPEDPRGWAILGRTYYVMQRYQEAAEAYAELVKRIPPDADALADYADALAMAQGRSLAGKPMEILRQALAVDPDHWKSLAMAGTEAFERGDYRTAIGYWERLQKQVPADSEIGRQVAASLTEARQRAGLSQSAK-AEQAAGASVSGTVRLAPEIAAKADPADTVFVYAR 369          
BLAST of mRNA_P-wetherbeei_contig21242.1.1 vs. uniprot
Match: A0A1F4BL57_9PROT (C-type cytochrome biogenesis protein CcmI n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26 TaxID=1797492 RepID=A0A1F4BL57_9PROT)

HSP 1 Score: 239 bits (609), Expect = 1.380e-72
Identity = 154/329 (46.81%), Postives = 208/329 (63.22%), Query Frame = 1
Query:    4 MIGFLLVAALLVVIALAWVLPPLWRVRQGGAGASGEASNLAILQDGMAELERDLKSGLLQEQQYQQAREDLERRALEEARAGVT-APQAQPHGRRAVAVLAIVIPLCATGLYWKLGTPEGVA-WNTVPIGGEVTAQQIETMVAQLAVRLQKNPRDGNGWALLARSNFVLQRYPEAANAYARAAELIKDDADLLADYADTVAMTQNRRIDAKVMRIVDAALRIDPMQWKALAMAGSGASERGDYANAIVYWKRLQSRTEPESELGRMLTANIAEAQKL--GGIKTAAKPAIPSVA-------GDVRGTVSLSPALAGKAGPADSVFIFPR 957
            M GFL+ A ++  +ALAWVLPPL R R+   G    ASNLA+L+D +AEL+ D+KSG L  +QY +AR +LERR LEE  A    A      GR A A LA++IP+ A  LY ++G+P  ++    +P   EVT  QIE MVA+L  RL++NP D  GW LLARSN VLQR+P+AA AYARA  L+ D+ADL ADYAD +AMTQ + +  +  R++  AL++DP   KALA+AG+ A E+ D+  AI +W+R+      ES +   +  +IAEA+    GG+  AA  +  +          +V GTV L+PALA KA P D+VFIF R
Sbjct:    1 MTGFLVAAVVMTALALAWVLPPLLR-RRPRDGVERGASNLALLRDQLAELDVDMKSGTLSSEQYSKARGELERRVLEETAAEHPGAVSGGRTGRWAAAALAVLIPVSAGLLYLQIGSPGALSPQQALPGHPEVTMDQIEGMVARLEARLEQNPGDAQGWVLLARSNLVLQRFPQAAKAYARAVGLVTDNADLYADYADALAMTQGQSLRGEPERLIAQALKLDPDHVKALALAGTVAFEKNDFNGAIAHWERILKVAPAESGIADSIRDSIAEARSRAGGGVAQAAPDSKAAXXXXXXXXMAEVSGTVRLAPALASKAAPTDTVFIFAR 328          
BLAST of mRNA_P-wetherbeei_contig21242.1.1 vs. uniprot
Match: A0A7V2GYQ4_9PROT (C-type cytochrome biogenesis protein CcmI n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7V2GYQ4_9PROT)

HSP 1 Score: 226 bits (576), Expect = 1.630e-67
Identity = 144/345 (41.74%), Postives = 204/345 (59.13%), Query Frame = 1
Query:   13 FLLVAALLVVIALAWVLPPLWRVRQGGAGASGEASNLAILQDGMAELERDLKSGLLQEQQYQQAREDLERRALEEARAGVTA--PQAQPH-GRRAVAVLAIVIPLCATGLYWKLGT------------PEGVAWNTVPIGGEVTAQQIETMVAQLAVRLQKNPRDGNGWALLARSNFVLQRYPEAANAYARAAELIKDDADLLADYADTVAMTQNRRIDAKVMRIVDAALRIDPMQWKALAMAGSGASERGDYANAIVYWKRLQSRTEPESELGRMLTANIAEAQKLGGIKTA--------------AKPAIPSVA-GDVRGTVSLSPALAGKAGPADSVFIFPR 957
            F+ +AA+LV + LAW+LPPL R  +        A+NL IL+D +AELE +   G +  +QY +A+ +LERR LE+  AG TA  P A    GR    V+A+V+P+ A  +YW+ G              EG   N  P        ++E +V +LA RL++ P + NGW  LAR+ +V++R+PEAA AY    +L+ DD  LLADYAD +AM + R+I  + M +V  AL +DP QWKALAMAG+ A +R DY  A+ YW+RL++    ESE+ + +  +IAEA++LGG+K A              AKP + + A G V G+V L+PAL  KA P D V+IF R
Sbjct:    4 FVFIAAILVAVGLAWLLPPLLRRERSTLAVERAAANLGILKDQLAELEAERARGAVSAEQYAEAKAELERRVLEDV-AGQTAAAPAATSRSGRTTALVIALVVPVAAGLIYWQRGDFTAFDPALQQAMGEGSPHNMAPA-------EVERIVQKLAERLKQEPDNANGWVTLARTYYVMRRFPEAAQAYETLVKLVPDDPGLLADYADALAMARGRKISGEPMALVKKALALDPNQWKALAMAGTEAFDRKDYKTAVEYWERLRNAVPAESEIAKSIANSIAEARELGGLKPAPVAAAPQPQKAAPAAKPPVAAPATGSVAGSVDLAPALKAKARPDDVVYIFAR 340          
BLAST of mRNA_P-wetherbeei_contig21242.1.1 vs. uniprot
Match: A0A7W0JR61_9BURK (C-type cytochrome biogenesis protein CcmI n=1 Tax=Burkholderiaceae bacterium TaxID=2030806 RepID=A0A7W0JR61_9BURK)

HSP 1 Score: 224 bits (571), Expect = 6.260e-67
Identity = 135/328 (41.16%), Postives = 203/328 (61.89%), Query Frame = 1
Query:    4 MIGFLLVAALLVVIALAWVLPPLWRVRQGGAGASGEASNLAILQDGMAELERDLKSGLLQEQQYQQAREDLERRALEEARAGVTAP--QAQPHGRRAVAVLAIVIPLCATGLYWKLGTPEGVAWNTVPI--GGEVTAQQIETMVAQLAVRLQKNPRDGNGWALLARSNFVLQRYPEAANAYARAAELIKDDADLLADYADTVAMTQNRRIDAKVMRIVDAALRIDPMQWKALAMAGSGASERGDYANAIVYWKRLQSRTEPESELGRMLTANIAEAQKLGGIKTAAKPAIPSVAG------DVRGTVSLSPALAGKAGPADSVFIFPR 957
            M  F+++A  +V +ALAW+L PL R    G      A+N+ I +D  A+L+ DL  G +  +Q+ +++ +LE+R L E RA   +   + +PH   AVAV A++IP+ A  LYW++GTP+ ++ + +      + + +QI+ M+AQ+  RL+K P +  GWA+LAR+++ +  + EAANAYA+ + L+ +DA++LADYAD +AM Q R    K M +V  AL+IDP QWKALAM+GS A +R DY  A  YW+RLQ     +S L + +  +I EA+ L G+   A+     VAG       V GTV+LSP+L  K  P DSVF+F R
Sbjct:    1 MTAFVIIAIAMVTVALAWLLWPLLR-SAAGRSVEHSAANITIFKDQFADLDADLARGTISAEQHAESKSELEKRLLAEVRATPESVSIERRPHRWSAVAV-AVIIPVAAGALYWQIGTPDALSPSVIAAKESDQPSREQIDAMIAQVKQRLEKEPNNVEGWAILARTHYTIGNFQEAANAYAKLSSLLPNDANMLADYADALAMGQGRSFAGKPMELVRLALQIDPTQWKALAMSGSEAFDRKDYRAAADYWQRLQDSAPADSPLRQRVQGSIDEARSLAGMPPVAQAQKGGVAGGAPAGRSVSGTVTLSPSLGSKVRPDDSVFVFAR 326          
BLAST of mRNA_P-wetherbeei_contig21242.1.1 vs. uniprot
Match: A0A011MH26_9PROT (Formate-dependent nitrite reductase complex subunit NrfG n=1 Tax=Candidatus Accumulibacter sp. SK-12 TaxID=1454001 RepID=A0A011MH26_9PROT)

HSP 1 Score: 218 bits (556), Expect = 9.000e-65
Identity = 137/321 (42.68%), Postives = 186/321 (57.94%), Query Frame = 1
Query:    4 MIGFLLVAALLVVIALAWVLPPLWRVRQGGAGASGEASNLAILQDGMAELERDLKSGLLQEQQYQQAREDLERRALEEARAGVTAPQAQPHGRRAVAVLAIVIPLCATGLYWKLGTPEGVAWNTVPIGGEVTAQQIETMVAQLAVRLQKNPRDGNGWALLARSNFVLQRYPEAANAYARAAELIKDDADLLADYADTVAMTQNRRIDAKVMRIVDAALRIDPMQWKALAMAGSGASERGDYANAIVYWKRLQSRTEPESELGRMLTANIAEAQKLGGIKTAA---KPAIPSVAGDVRGTVSLSPALAGKAGPADSVFIFPR 957
            M  F++ AALL+ +ALA +LPPLWR     AGA    ++LAI +D +AELER+   G L   +  QAR +L+RR L+E      A   Q  GRR    L +V+PL A   Y  LG P   A N +     +  +QI+ M+  L  +L+KNP DG GW +LARS  VL+RYPEAA+AYARA  ++  DA LLADYA+ ++      +  K   ++  AL IDP + +AL +AG+ A ER D+A A  YW RL S+ EP S+  + + A I EA++L   + A         S A  V G V+LS  LAG+A P D VF+F R
Sbjct:    1 MTAFIIGAALLLAVALAILLPPLWRSAPPAAGADRRETHLAIFRDQLAELERERDEGTLGAAEEAQARSELQRRLLDEVETQPAAALTQGGGRRTALFLVVVMPLAAAAGYALLGNPG--ALNPLQRQARIAPEQIDAMIGGLVEKLKKNPEDGKGWVMLARSYKVLERYPEAADAYARAGSVVDQDAGLLADYAEVLSQVHGGSLQGKAGELIKRALEIDPNEAQALLLAGAAARERQDFAAAADYWSRLLSQLEPGSDEAKTVAAAIGEARELAAARAAGGTTSAKATSGAAQVAGEVTLSGRLAGRARPDDVVFVFAR 319          
BLAST of mRNA_P-wetherbeei_contig21242.1.1 vs. uniprot
Match: A0A1F4CVX9_9PROT (C-type cytochrome biogenesis protein CcmI n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_19 TaxID=1797504 RepID=A0A1F4CVX9_9PROT)

HSP 1 Score: 218 bits (554), Expect = 1.410e-64
Identity = 144/322 (44.72%), Postives = 191/322 (59.32%), Query Frame = 1
Query:    4 MIGFLLVAALLVVIALAWVLPPLWRVRQGGAGASGEASNLAILQDGMAELERDLKSGLLQEQQYQQAREDLERRALEEARAGVTAPQAQP---HGRRAVAV-LAIVIPLCATGLYWKLGTPEGVAWNTVPIGGEVTAQQIETMVAQLAVRLQKNPRDGNGWALLARSNFVLQRYPEAANAYARAAELIKDDADLLADYADTVAMTQNRRIDAKVMRIVDAALRIDPMQWKALAMAGSGASERGDYANAIVYWKRLQSRTEPESELGRMLTANIAEAQKLGGIKTAAKPAIPSVAGDVRGTVSLSPALAGKAGPADSVFIFPR 957
            MI F  + A L  + LA +L PL+  R+ GAG S   +N++I +D M EL+ DL +G L +  YQ+AR +LE R LE+    V AP+ QP    G R VA+ L   +P+ A  LY  +G+P  +     P  GE+TA Q+E MV +LA RL++NP D +GW LL RS   L R+PEA  AYA+AA     DA LLAD+AD +AM + + ++ +  ++V  AL IDP   KALA+AG+ A  R D+A A  YWKR+    EP SE  R + AN+ EA    G K     A P V    RG V L+P LAGKA P D+VFIF R
Sbjct:    1 MIAFWAIGAGLAAVTLALLLRPLFS-RKAGAGVSRRDANISIYRDQMRELDADLAAGKLAQADYQRARSELEARLLED----VAAPE-QPLARGGARGVAIALGAAVPVLAAALYLAIGSPAALGPQADP--GEITAHQVEAMVERLAARLRENPDDADGWKLLGRSLSALGRFPEAVEAYAKAAVRAPRDAQLLADFADALAMARGQTLEGEPEKLVLRALEIDPSNLKALALAGTAAYGRKDFAGAAAYWKRMLPHVEPGSEDARAIQANVNEALAASGEKVEQARAAPGV----RGVVKLAPGLAGKASPEDTVFIFAR 310          
BLAST of mRNA_P-wetherbeei_contig21242.1.1 vs. uniprot
Match: C7RMN9_ACCPU (Cytochrome c-type biogenesis protein CcmI n=1 Tax=Accumulibacter phosphatis (strain UW-1) TaxID=522306 RepID=C7RMN9_ACCPU)

HSP 1 Score: 218 bits (554), Expect = 1.840e-64
Identity = 138/322 (42.86%), Postives = 192/322 (59.63%), Query Frame = 1
Query:    4 MIGFLLVAALLVVIALAWVLPPLWRVRQGGAGASGEASNLAILQDGMAELERDLKSGLLQEQQYQQAREDLERRALEEARAGVTAPQAQPHGRRAVAV-LAIVIPLCATGLYWKLGTPEGVAWNTVPIGGEVTAQQIETMVAQLAVRLQKNPRDGNGWALLARSNFVLQRYPEAANAYARAAELIKDDADLLADYADTVAMTQNRRIDAKVMRIVDAALRIDPMQWKALAMAGSGASERGDYANAIVYWKRLQSRTEPESELGRMLTANIAEAQKLGGIKTAA-KPAIPSVAGD--VRGTVSLSPALAGKAGPADSVFIFPR 957
            M GF++VAALLVV  +A +LPPLWR  +    A    +NLA+ +D ++ELER+   GLL E  +  AR +L+RR L+E +   T P     G R  A+ L ++IPL A   Y  LG+P   A + +     +  QQI  MVA L  +L+KNP D  GW +LARS  V++R+PEAA AY+RA  L+  DA LL DYAD ++ +    +  K   +V+ AL IDP + +AL +AG+ AS+R  +A A  YW RL ++ EP SE  R L A IA+A+++   + A  KP     AG   V G V+LS  LAG+A P D +F+F R
Sbjct:    1 MTGFIIVAALLVVAVIALLLPPLWRAPRASGTADRREANLAVFRDQISELERERNDGLLAEADFVSARNELQRRLLDEVQPATTTPAGNDSGGRKTALALLVIIPLAAAAGYTLLGSPR--ALDPLQRQARLAPQQIAEMVAGLVEKLRKNPDDSQGWVMLARSYKVMERFPEAAEAYSRAGTLVDQDAALLGDYADVLSRSHGGSLQGKPSELVERALSIDPDEPQALLLAGAAASDRQQFAAAATYWARLLAQLEPGSEEARALEAAIAKAREIAAAQAAGDKPGTXXXAGAGAVSGEVTLSGKLAGQAKPNDILFVFAR 320          
BLAST of mRNA_P-wetherbeei_contig21242.1.1 vs. uniprot
Match: UPI0019A7CDAA (C-type cytochrome biogenesis protein CcmI n=1 Tax=Burkholderiaceae bacterium TaxID=2030806 RepID=UPI0019A7CDAA)

HSP 1 Score: 216 bits (549), Expect = 1.200e-63
Identity = 135/328 (41.16%), Postives = 199/328 (60.67%), Query Frame = 1
Query:    4 MIGFLLVAALLVVIALAWVLPPLWRVRQGGAGASGEASNLAILQDGMAELERDLKSGLLQEQQYQQAREDLERRALEEARAGVTAPQAQPHGRRAVAVLAIVIPLCATGLYWKLGTPEGVAWNTVPIGGEV--TAQQIETMVAQLAVRLQKNPRDGNGWALLARSNFVLQRYPEAANAYARAAELIKDDADLLADYADTVAMTQNRRIDAKVMRIVDAALRIDPMQWKALAMAGSGASERGDYANAIVYWKRLQSRTEPESELGRMLTANIAEAQKLGGIKTAAKPAIPSVAGD--------VRGTVSLSPALAGKAGPADSVFIFPR 957
            M  FL++AA++V  A  WVL PL R  +  +     A+N++I +D  A+L+ DL  G L   Q+ +A+ +LERR L++ RA  +    +   R A A +A++ P+ A  LYW++GTPE ++        +   T +QI+TM+  L  RL K P +   WALLAR+++ +  + +AA AYAR + L+ +DADL+AD+AD +AM+Q R    + MR+V  AL IDP QWKALAMAG+ A E+ +Y+ AI YW+RLQ  T P+  + + L   I +A++L  +     PA PS+A +        V GTV+LSP+L  K  P DSVFIF R
Sbjct:    1 MTAFLVLAAVMVAAAAGWVLWPLLRAGETRS-VEHAAANVSIFKDQFADLDVDLARGTLSPDQHAEAKAELERRLLDDVRASPSTRGDRRSHRWAAAAVALITPIAAAALYWQIGTPEALSGVATAARNDSAPTREQIDTMITDLKQRLDKEPDNVEAWALLARTHYAVGDFAQAAAAYARLSLLLPNDADLMADHADALAMSQGRNFAGEPMRLVRRALTIDPAQWKALAMAGAEAFEQKNYSEAIDYWQRLQKVTPPDLPIAKQLQDGIDQARRLS-LSGTLPPASPSIADEPGAKPGRSVSGTVTLSPSLLSKIRPDDSVFIFAR 326          
BLAST of mRNA_P-wetherbeei_contig21242.1.1 vs. uniprot
Match: A0A1F4DIL4_9PROT (C-type cytochrome biogenesis protein CcmI n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DIL4_9PROT)

HSP 1 Score: 214 bits (546), Expect = 2.790e-63
Identity = 133/318 (41.82%), Postives = 193/318 (60.69%), Query Frame = 1
Query:   13 FLLVAALLVVIALAWVLPPLWRVRQGGAGASGEASNLAILQDGMAELERDLKSGLLQEQQYQQAREDLERRALEEARAGVTAPQAQPH-GRRAVAVLAIVIPLCATGLYWKLGTPEGVAWNTVPIGGE-VTAQQIETMVAQLAVRLQKNPRDGNGWALLARSNFVLQRYPEAANAYARAAELIKDDADLLADYADTVAMTQNRRIDAKVMRIVDAALRIDPMQWKALAMAGSGASERGDYANAIVYWKRLQSRTEPESELGRMLTANIAEAQKLGGIKTAAKPAIPSVAGD-VRGTVSLSPALAGKAGPADSVFIFPR 957
            F +V ALLV IAL +++PPL R +  G  + G A N+A+ +D + ELE DL++G L    Y++AR +LE R L++   GV     +P  GRRA  VL + +PL A GLY+ +G P+ +A          +  QQ + +V +LA RL+ NP +  GW +LARS   L R+ EAA AYA A E +  DA +LADYAD +AM Q RR+  +  +I+  AL++DP   KALA+AG+ A ++ DYA A+ +W+R+      +SEL + + A++AEAQ LGG   A +  I +   + + G V L+P  A K  P D+VFIF R
Sbjct:    4 FWIVGALLVAIALLFIVPPLLRSKASGRLSRG-AVNVAVYRDQLRELEADLRAGTLSGDHYEKARRELEARLLDDV-GGVERAAGRPQWGRRAALVLGLAVPLAAVGLYFVVGNPQALAPQAATDAAHNLDVQQFQALVDRLAERLKNNPDEVQGWVMLARSYAALGRFGEAAAAYAHAVERLPGDAQVLADYADALAMAQGRRLQGEPEKIIARALQVDPDNVKALALAGTVAFDKQDYATAVAHWERILRLVPQDSELAQSVRASVAEAQALGGGSPAPRERITAAGNNAISGVVRLAPEFAAKVAPTDTVFIFAR 319          
BLAST of mRNA_P-wetherbeei_contig21242.1.1 vs. uniprot
Match: A0A369XMY3_9PROT (C-type cytochrome biogenesis protein CcmI n=2 Tax=Candidatus Accumulibacter phosphatis TaxID=327160 RepID=A0A369XMY3_9PROT)

HSP 1 Score: 214 bits (544), Expect = 5.680e-63
Identity = 133/322 (41.30%), Postives = 197/322 (61.18%), Query Frame = 1
Query:    4 MIGFLLVAALLVVIALAWVLPPLWRVRQGGAGASGEASNLAILQDGMAELERDLKSGLLQEQQYQQAREDLERRALEEARAGVTAPQAQPHGRRAVAVLAIVIPLCATGLYWKLGTPEGVAWNTVPIGGEVTAQQIETMVAQLAVRLQKNPRDGNGWALLARSNFVLQRYPEAANAYARAAELIKDDADLLADYADTVAMTQNRRIDAKVMRIVDAALRIDPMQWKALAMAGSGASERGDYANAIVYWKRLQSRTEPESELGRMLTANIAEAQKLGGIKTAAKPA----IPSVAGDVRGTVSLSPALAGKAGPADSVFIFPR 957
            M  F+L A LLVV  +A +LPPL R  +  AGA    +NLAI +D +AELER+  +G L    ++QA+ +L+RR L+E +   +AP     GR+    L +V+PL A G Y  LG  +  A + +     +T QQIE MVA L  +L++NP D  GW +LARS  VL+R+P+AA AY RA+ L+  + +LLADYA+ ++ +Q   +  K   +V+ AL+IDP + +AL +AG+ AS+R  +A A  YW RL ++ EP SE  + L A +  A++L     +A+PA    + S +G V G V+LS  +AG+A P D +F+F R
Sbjct:    1 MTSFILFAVLLVVAVIALLLPPLLRAPKPSAGADHREANLAIFRDQLAELERERANGALDLADFEQAQNELQRRLLDEVQPRASAPSEARPGRKTALALLVVLPLAAAGGYALLGNQQ--ALDPLQRQARITPQQIEGMVAGLVEKLKENPDDSKGWLMLARSYKVLERFPQAAEAYGRASALVDQNPELLADYAEVLSRSQGGNLQGKPTELVERALKIDPNEPQALLLAGAAASDRQQFALAADYWARLLAQIEPGSEESKALAAAVERARQLATQPASAEPAGQASVASGSGAVSGEVTLSGEVAGQARPDDVLFVFAR 320          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21242.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2W4K3W3_9PROT3.470e-7747.98C-type cytochrome biogenesis protein CcmI n=1 Tax=... [more]
A0A1F4BL57_9PROT1.380e-7246.81C-type cytochrome biogenesis protein CcmI n=1 Tax=... [more]
A0A7V2GYQ4_9PROT1.630e-6741.74C-type cytochrome biogenesis protein CcmI n=1 Tax=... [more]
A0A7W0JR61_9BURK6.260e-6741.16C-type cytochrome biogenesis protein CcmI n=1 Tax=... [more]
A0A011MH26_9PROT9.000e-6542.68Formate-dependent nitrite reductase complex subuni... [more]
A0A1F4CVX9_9PROT1.410e-6444.72C-type cytochrome biogenesis protein CcmI n=1 Tax=... [more]
C7RMN9_ACCPU1.840e-6442.86Cytochrome c-type biogenesis protein CcmI n=1 Tax=... [more]
UPI0019A7CDAA1.200e-6341.16C-type cytochrome biogenesis protein CcmI n=1 Tax=... [more]
A0A1F4DIL4_9PROT2.790e-6341.82C-type cytochrome biogenesis protein CcmI n=1 Tax=... [more]
A0A369XMY3_9PROT5.680e-6341.30C-type cytochrome biogenesis protein CcmI n=2 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig21242contigP-wetherbeei_contig21242:10..966 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog522306.CAP2UW1_0720
PFAMsTPR_16
Model size957
Max annot lvl28216|Betaproteobacteria
KEGG koko:K02200
Hectar predicted targeting categorysignal peptide
Exons1
Evalue4.11e-65
EggNOG OGsCOG4235@1|root,COG4235@2|Bacteria,1MY4J@1224|Proteobacteria,2VQ05@28216|Betaproteobacteria,1KQB8@119066|unclassified Betaproteobacteria
DescriptionCytochrome c-type biogenesis protein
Cds size954
COG categoryO
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186219.739623-CDS-P-wetherbeei_contig21242:9..9631683186219.739623-CDS-P-wetherbeei_contig21242:9..963Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig21242 10..963 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186219.75284-UTR-P-wetherbeei_contig21242:963..9661683186219.75284-UTR-P-wetherbeei_contig21242:963..966Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig21242 964..966 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig21242.1.1prot_P-wetherbeei_contig21242.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig21242 10..963 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig21242.1.1

>prot_P-wetherbeei_contig21242.1.1 ID=prot_P-wetherbeei_contig21242.1.1|Name=mRNA_P-wetherbeei_contig21242.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=318bp
MIGFLLVAALLVVIALAWVLPPLWRVRQGGAGASGEASNLAILQDGMAEL
ERDLKSGLLQEQQYQQAREDLERRALEEARAGVTAPQAQPHGRRAVAVLA
IVIPLCATGLYWKLGTPEGVAWNTVPIGGEVTAQQIETMVAQLAVRLQKN
PRDGNGWALLARSNFVLQRYPEAANAYARAAELIKDDADLLADYADTVAM
TQNRRIDAKVMRIVDAALRIDPMQWKALAMAGSGASERGDYANAIVYWKR
LQSRTEPESELGRMLTANIAEAQKLGGIKTAAKPAIPSVAGDVRGTVSLS
PALAGKAGPADSVFIFPR
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mRNA from alignment at P-wetherbeei_contig21242:10..966-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig21242.1.1 ID=mRNA_P-wetherbeei_contig21242.1.1|Name=mRNA_P-wetherbeei_contig21242.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=957bp|location=Sequence derived from alignment at P-wetherbeei_contig21242:10..966- (Phaeothamnion wetherbeei SAG_119_79)
GCGATGATCGGCTTTTTGCTGGTTGCAGCGCTGTTGGTGGTGATAGCTCT GGCGTGGGTGCTGCCGCCGTTGTGGCGCGTACGGCAGGGCGGCGCGGGCG CATCAGGTGAGGCATCCAATCTTGCGATACTCCAAGACGGCATGGCTGAG CTCGAGCGCGACCTCAAAAGCGGCCTGCTGCAGGAGCAGCAATATCAGCA GGCGCGCGAAGATCTTGAGCGGCGCGCACTGGAAGAAGCGCGTGCCGGCG TGACGGCACCACAGGCGCAGCCGCATGGCCGCCGCGCGGTAGCAGTGCTG GCCATCGTCATCCCGCTGTGCGCAACTGGGCTGTATTGGAAGCTGGGCAC CCCGGAAGGCGTGGCATGGAATACGGTGCCGATTGGCGGAGAGGTGACGG CCCAGCAGATCGAAACCATGGTCGCGCAGCTGGCGGTGCGCCTGCAGAAA AATCCGCGGGACGGCAACGGGTGGGCTTTGCTCGCGCGCTCCAATTTCGT CCTGCAGCGCTACCCGGAAGCCGCGAACGCCTATGCGCGTGCGGCAGAGT TGATCAAGGATGACGCGGATTTGCTTGCGGATTACGCAGACACCGTGGCG ATGACGCAAAACCGGCGCATCGACGCCAAGGTCATGCGGATCGTCGATGC CGCATTACGCATAGATCCCATGCAGTGGAAGGCGCTTGCCATGGCTGGAT CGGGGGCCTCCGAGCGCGGGGACTACGCGAATGCCATCGTTTATTGGAAG CGCCTGCAGTCGCGCACCGAGCCGGAATCGGAACTAGGCCGCATGCTGAC GGCGAATATCGCCGAAGCGCAGAAATTGGGCGGAATCAAAACGGCTGCCA AACCTGCGATACCGTCAGTTGCAGGCGACGTGCGCGGCACGGTCAGCCTG AGTCCGGCGCTCGCGGGCAAGGCCGGACCTGCGGATTCCGTATTTATATT TCCGCGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig21242:10..966-

>mRNA_P-wetherbeei_contig21242.1.1 ID=mRNA_P-wetherbeei_contig21242.1.1|Name=mRNA_P-wetherbeei_contig21242.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=954bp|location=Sequence derived from alignment at P-wetherbeei_contig21242:10..966- (Phaeothamnion wetherbeei SAG_119_79)
ATGATCGGCTTTTTGCTGGTTGCAGCGCTGTTGGTGGTGATAGCTCTGGC
GTGGGTGCTGCCGCCGTTGTGGCGCGTACGGCAGGGCGGCGCGGGCGCAT
CAGGTGAGGCATCCAATCTTGCGATACTCCAAGACGGCATGGCTGAGCTC
GAGCGCGACCTCAAAAGCGGCCTGCTGCAGGAGCAGCAATATCAGCAGGC
GCGCGAAGATCTTGAGCGGCGCGCACTGGAAGAAGCGCGTGCCGGCGTGA
CGGCACCACAGGCGCAGCCGCATGGCCGCCGCGCGGTAGCAGTGCTGGCC
ATCGTCATCCCGCTGTGCGCAACTGGGCTGTATTGGAAGCTGGGCACCCC
GGAAGGCGTGGCATGGAATACGGTGCCGATTGGCGGAGAGGTGACGGCCC
AGCAGATCGAAACCATGGTCGCGCAGCTGGCGGTGCGCCTGCAGAAAAAT
CCGCGGGACGGCAACGGGTGGGCTTTGCTCGCGCGCTCCAATTTCGTCCT
GCAGCGCTACCCGGAAGCCGCGAACGCCTATGCGCGTGCGGCAGAGTTGA
TCAAGGATGACGCGGATTTGCTTGCGGATTACGCAGACACCGTGGCGATG
ACGCAAAACCGGCGCATCGACGCCAAGGTCATGCGGATCGTCGATGCCGC
ATTACGCATAGATCCCATGCAGTGGAAGGCGCTTGCCATGGCTGGATCGG
GGGCCTCCGAGCGCGGGGACTACGCGAATGCCATCGTTTATTGGAAGCGC
CTGCAGTCGCGCACCGAGCCGGAATCGGAACTAGGCCGCATGCTGACGGC
GAATATCGCCGAAGCGCAGAAATTGGGCGGAATCAAAACGGCTGCCAAAC
CTGCGATACCGTCAGTTGCAGGCGACGTGCGCGGCACGGTCAGCCTGAGT
CCGGCGCTCGCGGGCAAGGCCGGACCTGCGGATTCCGTATTTATATTTCC
GCGC
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