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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 2760 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Cds size | 2760 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186219.7078311-CDS-P-wetherbeei_contig2124:2865..5625 | 1683186219.7078311-CDS-P-wetherbeei_contig2124:2865..5625 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig2124 2866..5625 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig2124.2.1 >prot_P-wetherbeei_contig2124.2.1 ID=prot_P-wetherbeei_contig2124.2.1|Name=mRNA_P-wetherbeei_contig2124.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=920bp
MSARLQLVLELQPCALRLDQRPKRRSIGAQAYCVGELQAKTKRMHDLAAA
RTLQRRQVSNAPMRQESSGLSGAAVCTTLGSVIEADGSFAREHEVTAVQC
APRPNRTWLLTPVQVTTKRKRGNGTATEAAVTAVPSPRAAVAAVPGDNTT
PANSVNPAVLRLTSDNGQRTVRRTGGAAPSSRHFTAQAACLWLGRGQEEF
RLRRYQAHRAATAAARRRQLWHEAHESVASGDPPRPSSAGRASVTASDGG
SIIVGRSWSVGLLAELDAVKAAMLRERLLGTVRALVHRVEEAYSSNGSNG
GGSGGSNATSFGGAQNASADAEADMGTGTGAAVGGMGSSGTNGGSRGRFC
SRTDRHLMSTSSGGGGSGSRSRGEGDGGAGCAVSKSANASDISSKDLIAA
RWELAVVIAHLRTASIEVVEAVLRWRTVVSGFTAEAVDRHCFQGSETVET
AETTVAFLTAVLPFPLPPLRRPPSSPSPSSSLLPAQPSSTPTLPCVPMVN
DAEPPMFSWRGKNYLLKMQGDLLFLDKSATARKIRLGTAAWENPFLLPPP
TATTASAAGGNGDGSHDDGGGSGGGRDGSAYGRGQGSGGYGAGSAYGSGA
GWESGGGAGGGDYDGNGSGSDSAGLHLVGPWLPTPLLERAARAQAVLMAE
QRCADLAERRRYDGSDGRTTSSLWEEFEIGDVATAMVPDSGTAAAAGPND
TAAATAAATAAEERGVEGTTDLLRAEQEIAGEYLATPATPGSWRLRCSSR
ERSRQRAAASVAAAGAAASSSLLAQWAPPAPWARGGSMLADFDWCGTNRR
DAATGEAGFPDEDFLQWMPGGGAGHGGGSGSIDDNLAAGCRDACWGDAYA
GYYSGSKRCMTAPPLLVRVVASNGVELERASERPMSQRQCYKSQVAAATT
TAGEGTRSGGGTGSFLRVVA back to topmRNA from alignment at P-wetherbeei_contig2124:2866..5625- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig2124.2.1 ID=mRNA_P-wetherbeei_contig2124.2.1|Name=mRNA_P-wetherbeei_contig2124.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2760bp|location=Sequence derived from alignment at P-wetherbeei_contig2124:2866..5625- (Phaeothamnion wetherbeei SAG_119_79)
ATGTCTGCTCGTCTCCAGCTCGTTTTGGAGCTTCAGCCATGCGCGCTGCG
GCTCGATCAGAGGCCAAAGCGCCGTTCCATCGGGGCGCAGGCATACTGTG
TTGGCGAGCTACAAGCGAAAACGAAGCGGATGCACGATTTGGCTGCAGCA
CGCACTCTTCAGCGTCGACAGGTTTCGAACGCACCTATGAGGCAAGAATC
TTCCGGTCTTTCCGGTGCCGCCGTTTGTACCACTCTGGGCTCTGTAATTG
AAGCAGATGGCTCGTTTGCGCGCGAACACGAAGTCACTGCTGTTCAATGT
GCTCCGAGGCCGAATAGGACGTGGCTCTTGACGCCAGTGCAAGTGACGAC
GAAAAGAAAGAGGGGTAACGGCACGGCGACGGAGGCGGCGGTCACAGCCG
TTCCCTCTCCTAGGGCCGCCGTCGCCGCCGTGCCTGGCGACAACACTACC
CCCGCCAACAGCGTCAACCCGGCAGTTCTGCGACTTACATCAGACAACGG
CCAAAGAACTGTGAGGAGGACGGGAGGGGCGGCTCCATCTTCACGGCACT
TCACGGCACAGGCCGCCTGCCTATGGCTGGGCCGCGGCCAAGAGGAGTTC
CGGCTGCGAAGATACCAAGCCCACCGCGCCGCCACCGCCGCGGCGCGCCG
CCGCCAGCTCTGGCACGAGGCGCACGAGTCGGTGGCGTCGGGCGACCCTC
CCCGGCCGTCCAGCGCTGGTAGAGCCTCTGTAACCGCCTCCGACGGCGGC
TCAATTATCGTTGGAAGGTCGTGGAGCGTCGGCCTGCTCGCAGAACTGGA
CGCGGTCAAAGCGGCCATGCTGCGGGAGCGTCTCCTCGGGACCGTGCGGG
CGCTGGTGCACCGGGTCGAGGAAGCGTACAGCAGCAACGGCAGCAACGGC
GGCGGCAGTGGCGGCAGTAACGCCACGTCTTTTGGTGGCGCTCAGAATGC
CTCTGCCGACGCTGAAGCCGACATGGGTACCGGCACTGGCGCTGCTGTTG
GCGGCATGGGGAGCAGCGGTACGAATGGCGGCAGTCGAGGACGTTTTTGC
AGCAGGACTGATCGCCACCTCATGAGCACTAGCAGCGGCGGTGGCGGCAG
CGGAAGCCGCTCTCGCGGCGAGGGCGACGGCGGCGCGGGCTGTGCCGTCA
GCAAGAGCGCAAACGCATCGGACATCAGCAGCAAAGACCTAATTGCGGCA
CGGTGGGAGCTGGCAGTGGTGATTGCACATCTACGGACCGCGTCTATCGA
GGTGGTGGAGGCGGTGCTGCGATGGCGCACCGTCGTTAGTGGCTTCACCG
CCGAAGCCGTCGATCGCCATTGCTTTCAGGGGAGTGAAACGGTGGAAACG
GCCGAAACAACAGTGGCCTTCTTAACCGCAGTGTTGCCGTTCCCGCTGCC
CCCACTGCGGCGGCCGCCGTCGTCGCCATCACCCTCGTCATCGCTGCTAC
CGGCACAGCCGTCATCTACGCCGACTCTTCCTTGCGTCCCGATGGTTAAC
GACGCAGAGCCTCCGATGTTCTCATGGCGGGGGAAGAACTACCTGTTAAA
GATGCAAGGCGATCTTCTCTTCCTGGACAAGTCGGCGACGGCTCGCAAAA
TCCGCCTCGGTACGGCCGCATGGGAGAATCCGTTTCTCCTGCCGCCGCCG
ACGGCGACAACTGCGTCTGCCGCCGGAGGCAATGGCGACGGCAGCCATGA
TGACGGTGGCGGCAGCGGCGGGGGACGCGACGGTAGCGCCTACGGCCGTG
GCCAGGGTAGTGGCGGCTACGGCGCAGGGAGTGCCTACGGCAGCGGCGCC
GGTTGGGAAAGCGGCGGCGGCGCCGGCGGTGGGGACTACGACGGCAATGG
CAGCGGCAGCGACAGCGCAGGTCTCCATCTGGTCGGCCCGTGGCTGCCGA
CCCCACTTCTGGAGCGCGCAGCGCGGGCCCAGGCGGTCCTCATGGCAGAA
CAGCGGTGCGCCGACCTGGCGGAGCGGCGCCGCTATGACGGCTCCGACGG
CCGCACAACGAGCTCGCTCTGGGAGGAATTCGAGATCGGTGACGTCGCGA
CAGCGATGGTTCCCGACAGCGGCACGGCGGCGGCTGCTGGACCCAACGAC
ACGGCGGCGGCGACGGCGGCAGCGACAGCGGCGGAAGAGCGTGGCGTCGA
AGGCACCACGGACTTGCTCAGAGCAGAGCAGGAGATCGCAGGCGAGTATC
TGGCGACGCCAGCCACCCCCGGTTCGTGGCGGCTCCGCTGCAGTTCCAGG
GAAAGATCGCGCCAGCGGGCGGCCGCCAGCGTCGCCGCCGCAGGCGCTGC
CGCCTCTTCATCCCTGCTGGCGCAGTGGGCGCCGCCGGCACCGTGGGCGC
GCGGCGGCAGCATGCTGGCCGATTTTGACTGGTGCGGCACGAACCGCCGC
GATGCGGCAACTGGCGAGGCGGGGTTTCCGGACGAAGACTTTCTGCAGTG
GATGCCGGGCGGAGGGGCCGGCCATGGCGGCGGTAGCGGCAGCATCGACG
ACAACCTGGCGGCAGGGTGCCGAGATGCATGCTGGGGGGATGCGTACGCC
GGCTACTATAGCGGTTCGAAGCGCTGCATGACGGCGCCGCCGCTGCTCGT
GCGTGTCGTCGCCTCCAACGGTGTGGAGCTAGAGCGTGCGTCGGAGCGTC
CGATGTCCCAGCGGCAATGCTACAAGAGTCAGGTGGCTGCCGCCACCACT
ACCGCTGGCGAAGGCACTCGCAGCGGCGGCGGCACCGGCTCCTTCCTGCG
GGTCGTCGCG back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig2124:2866..5625- >mRNA_P-wetherbeei_contig2124.2.1 ID=mRNA_P-wetherbeei_contig2124.2.1|Name=mRNA_P-wetherbeei_contig2124.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2760bp|location=Sequence derived from alignment at P-wetherbeei_contig2124:2866..5625- (Phaeothamnion wetherbeei SAG_119_79)
ATGTCTGCTCGTCTCCAGCTCGTTTTGGAGCTTCAGCCATGCGCGCTGCG
GCTCGATCAGAGGCCAAAGCGCCGTTCCATCGGGGCGCAGGCATACTGTG
TTGGCGAGCTACAAGCGAAAACGAAGCGGATGCACGATTTGGCTGCAGCA
CGCACTCTTCAGCGTCGACAGGTTTCGAACGCACCTATGAGGCAAGAATC
TTCCGGTCTTTCCGGTGCCGCCGTTTGTACCACTCTGGGCTCTGTAATTG
AAGCAGATGGCTCGTTTGCGCGCGAACACGAAGTCACTGCTGTTCAATGT
GCTCCGAGGCCGAATAGGACGTGGCTCTTGACGCCAGTGCAAGTGACGAC
GAAAAGAAAGAGGGGTAACGGCACGGCGACGGAGGCGGCGGTCACAGCCG
TTCCCTCTCCTAGGGCCGCCGTCGCCGCCGTGCCTGGCGACAACACTACC
CCCGCCAACAGCGTCAACCCGGCAGTTCTGCGACTTACATCAGACAACGG
CCAAAGAACTGTGAGGAGGACGGGAGGGGCGGCTCCATCTTCACGGCACT
TCACGGCACAGGCCGCCTGCCTATGGCTGGGCCGCGGCCAAGAGGAGTTC
CGGCTGCGAAGATACCAAGCCCACCGCGCCGCCACCGCCGCGGCGCGCCG
CCGCCAGCTCTGGCACGAGGCGCACGAGTCGGTGGCGTCGGGCGACCCTC
CCCGGCCGTCCAGCGCTGGTAGAGCCTCTGTAACCGCCTCCGACGGCGGC
TCAATTATCGTTGGAAGGTCGTGGAGCGTCGGCCTGCTCGCAGAACTGGA
CGCGGTCAAAGCGGCCATGCTGCGGGAGCGTCTCCTCGGGACCGTGCGGG
CGCTGGTGCACCGGGTCGAGGAAGCGTACAGCAGCAACGGCAGCAACGGC
GGCGGCAGTGGCGGCAGTAACGCCACGTCTTTTGGTGGCGCTCAGAATGC
CTCTGCCGACGCTGAAGCCGACATGGGTACCGGCACTGGCGCTGCTGTTG
GCGGCATGGGGAGCAGCGGTACGAATGGCGGCAGTCGAGGACGTTTTTGC
AGCAGGACTGATCGCCACCTCATGAGCACTAGCAGCGGCGGTGGCGGCAG
CGGAAGCCGCTCTCGCGGCGAGGGCGACGGCGGCGCGGGCTGTGCCGTCA
GCAAGAGCGCAAACGCATCGGACATCAGCAGCAAAGACCTAATTGCGGCA
CGGTGGGAGCTGGCAGTGGTGATTGCACATCTACGGACCGCGTCTATCGA
GGTGGTGGAGGCGGTGCTGCGATGGCGCACCGTCGTTAGTGGCTTCACCG
CCGAAGCCGTCGATCGCCATTGCTTTCAGGGGAGTGAAACGGTGGAAACG
GCCGAAACAACAGTGGCCTTCTTAACCGCAGTGTTGCCGTTCCCGCTGCC
CCCACTGCGGCGGCCGCCGTCGTCGCCATCACCCTCGTCATCGCTGCTAC
CGGCACAGCCGTCATCTACGCCGACTCTTCCTTGCGTCCCGATGGTTAAC
GACGCAGAGCCTCCGATGTTCTCATGGCGGGGGAAGAACTACCTGTTAAA
GATGCAAGGCGATCTTCTCTTCCTGGACAAGTCGGCGACGGCTCGCAAAA
TCCGCCTCGGTACGGCCGCATGGGAGAATCCGTTTCTCCTGCCGCCGCCG
ACGGCGACAACTGCGTCTGCCGCCGGAGGCAATGGCGACGGCAGCCATGA
TGACGGTGGCGGCAGCGGCGGGGGACGCGACGGTAGCGCCTACGGCCGTG
GCCAGGGTAGTGGCGGCTACGGCGCAGGGAGTGCCTACGGCAGCGGCGCC
GGTTGGGAAAGCGGCGGCGGCGCCGGCGGTGGGGACTACGACGGCAATGG
CAGCGGCAGCGACAGCGCAGGTCTCCATCTGGTCGGCCCGTGGCTGCCGA
CCCCACTTCTGGAGCGCGCAGCGCGGGCCCAGGCGGTCCTCATGGCAGAA
CAGCGGTGCGCCGACCTGGCGGAGCGGCGCCGCTATGACGGCTCCGACGG
CCGCACAACGAGCTCGCTCTGGGAGGAATTCGAGATCGGTGACGTCGCGA
CAGCGATGGTTCCCGACAGCGGCACGGCGGCGGCTGCTGGACCCAACGAC
ACGGCGGCGGCGACGGCGGCAGCGACAGCGGCGGAAGAGCGTGGCGTCGA
AGGCACCACGGACTTGCTCAGAGCAGAGCAGGAGATCGCAGGCGAGTATC
TGGCGACGCCAGCCACCCCCGGTTCGTGGCGGCTCCGCTGCAGTTCCAGG
GAAAGATCGCGCCAGCGGGCGGCCGCCAGCGTCGCCGCCGCAGGCGCTGC
CGCCTCTTCATCCCTGCTGGCGCAGTGGGCGCCGCCGGCACCGTGGGCGC
GCGGCGGCAGCATGCTGGCCGATTTTGACTGGTGCGGCACGAACCGCCGC
GATGCGGCAACTGGCGAGGCGGGGTTTCCGGACGAAGACTTTCTGCAGTG
GATGCCGGGCGGAGGGGCCGGCCATGGCGGCGGTAGCGGCAGCATCGACG
ACAACCTGGCGGCAGGGTGCCGAGATGCATGCTGGGGGGATGCGTACGCC
GGCTACTATAGCGGTTCGAAGCGCTGCATGACGGCGCCGCCGCTGCTCGT
GCGTGTCGTCGCCTCCAACGGTGTGGAGCTAGAGCGTGCGTCGGAGCGTC
CGATGTCCCAGCGGCAATGCTACAAGAGTCAGGTGGCTGCCGCCACCACT
ACCGCTGGCGAAGGCACTCGCAGCGGCGGCGGCACCGGCTCCTTCCTGCG
GGTCGTCGCG back to top
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