mRNA_P-wetherbeei_contig21229.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig21229.1.1
Unique NamemRNA_P-wetherbeei_contig21229.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig21229.1.1 vs. uniprot
Match: A0A3C0TRP7_9PROT (Glycosyl transferase, group 1 n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TRP7_9PROT)

HSP 1 Score: 226 bits (575), Expect = 5.840e-70
Identity = 110/167 (65.87%), Postives = 133/167 (79.64%), Query Frame = 1
Query:    1 ACLIIKMLNPEVWPEGVRRLHAAIGGARNIKIVTQVMTRGDVFSMLAAADVVVSLHRAEGFGLLAAEAMLLGKPVIATDWSATTDFLNAENACPVPYRLIPAHDPQGNYHYPDQKWADPDIDEAARWLRLLRADPALRQRLGNRAKTDASQFSQHTYHAQMRRALSL 501
            ACLI+KM++  VWPEG+R+L AAI GA NIK+VTQ +TR  VFS+LAAAD V+SLHR+EGFGLLAAEAM+LGKPVI +DWS+T +FLN EN CPVP RLIPA DPQGNYH+PDQ WA+PDI  AA WL  LR +P LR  +G+RA+  A QFS   Y A++ +A SL
Sbjct:  238 ACLIVKMMHGGVWPEGLRQLRAAIDGADNIKLVTQTLTRQQVFSLLAAADTVMSLHRSEGFGLLAAEAMVLGKPVIVSDWSSTAEFLNRENGCPVPCRLIPAVDPQGNYHFPDQSWAEPDIRAAAEWLHRLRDNPELRLAIGHRAREGARQFSSEVYAARLNQAFSL 404          
BLAST of mRNA_P-wetherbeei_contig21229.1.1 vs. uniprot
Match: A0A5N3PJ02_9HYPH (Glycosyltransferase family 4 protein n=1 Tax=Microvirga brassicacearum TaxID=2580413 RepID=A0A5N3PJ02_9HYPH)

HSP 1 Score: 160 bits (404), Expect = 2.100e-44
Identity = 80/158 (50.63%), Postives = 108/158 (68.35%), Query Frame = 1
Query:    1 ACLIIKMLNPEVWPEGVRRLHAAIGGARNIKIVTQVMTRGDVFSMLAAADVVVSLHRAEGFGLLAAEAMLLGKPVIATDWSATTDFLNAENACPVPYRLIPAHDPQGNYHYPDQKWADPDIDEAARWLRLLRADPALRQRLGNRAKTDASQF-SQHTY 471
            A LI+K  N   +P+ V+ +  A GGA N+  + +++   ++ ++ A +DVV+SLHRAEGFGL+ AE ML G PVIATDWS  TDF+  E   PV Y+L+PAHDPQ  Y +PD  WAD D+++AA  LR LRADP LR+ LG  A+T A++F SQ  Y
Sbjct:  239 ARLIVKFANASAYPKAVQLMKDAAGGASNVVFIGEMLDFAEIEALYAESDVVMSLHRAEGFGLVVAEGMLRGLPVIATDWSGNTDFMTRETGMPVGYKLVPAHDPQNTYEHPDMCWADADVEQAAEALRTLRADPDLRRNLGLAAQTHATRFLSQKAY 396          
BLAST of mRNA_P-wetherbeei_contig21229.1.1 vs. uniprot
Match: A0A1W6ZXU1_9HYPH (Glycos_transf_1 domain-containing protein n=1 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W6ZXU1_9HYPH)

HSP 1 Score: 152 bits (383), Expect = 2.600e-41
Identity = 74/158 (46.84%), Postives = 106/158 (67.09%), Query Frame = 1
Query:    7 LIIKMLNPEVWPEGVRRLHAAIGGARNIKIVTQVMTRGDVFSMLAAADVVVSLHRAEGFGLLAAEAMLLGKPVIATDWSATTDFLNAENACPVPYRLIPAHDPQGNYHYPDQKWADPDIDEAARWLRLLRADPALRQRLGNRAKTDASQFSQHTYHAQ 480
            L+IK+ +P   P   + L+AAI GA NI+++ + ++  ++  ++A AD+V+S HR+EGFGL+ AEAM LGKPVIAT WS   DF+N EN+  +PY+LIP  D    +    Q+WADPD+D AARWL  L  DP LRQR+G +A  D + +   T+ A+
Sbjct:  237 LVIKLSDPGNVPWARQELNAAIAGAPNIRVIERTLSSKEMTGLMALADIVISTHRSEGFGLICAEAMRLGKPVIATGWSGNLDFMNEENSALLPYKLIPVADRDNAFDSESQQWADPDVDAAARWLTQLADDPDLRQRMGTKAAKDIAAYLSPTHFAK 394          
BLAST of mRNA_P-wetherbeei_contig21229.1.1 vs. uniprot
Match: UPI0014302AF2 (glycosyltransferase family 4 protein n=1 Tax=Vitreimonas flagellata TaxID=2560861 RepID=UPI0014302AF2)

HSP 1 Score: 149 bits (376), Expect = 1.380e-40
Identity = 75/145 (51.72%), Postives = 99/145 (68.28%), Query Frame = 1
Query:    1 ACLIIKMLNPEVWPEGVRRLHAAIGGARNIKIVTQVMTRGDVFSMLAAADVVVSLHRAEGFGLLAAEAMLLGKPVIATDWSATTDFLNAENACPVPYRLIPAHDPQGNYHYPDQKWADPDIDEAARWLRLLRADPALRQRLGNRA 435
            A L+++  N   WPE VR++ AAIGGA NI +    +T   +  + A +DVV+SLHRAEGFGL+ AEAML GKPVI TDWS T DF+++ + CPV YRL+  +DPQ  Y   D+ WA+PD  EAAR L+ LR+D   R+ +G RA
Sbjct:  192 ATLLVQFSNSSHWPEAVRQMQAAIGGATNIVLQESSLTDEGIDDLYAQSDVVLSLHRAEGFGLVPAEAMLRGKPVIVTDWSGTKDFVSSAHGCPVGYRLVEVNDPQSTYR--DEVWAEPDEQEAARLLQKLRSDKVYREEIGQRA 334          
BLAST of mRNA_P-wetherbeei_contig21229.1.1 vs. uniprot
Match: A0A512BZ61_9HYPH (Glycosyl transferase n=1 Tax=Microvirga aerophila TaxID=670291 RepID=A0A512BZ61_9HYPH)

HSP 1 Score: 149 bits (377), Expect = 2.540e-40
Identity = 79/158 (50.00%), Postives = 100/158 (63.29%), Query Frame = 1
Query:    7 LIIKMLNPEVWPEGVRRLHAAIGGARNIKIVTQVMTRGDVFSMLAAADVVVSLHRAEGFGLLAAEAMLLGKPVIATDWSATTDFLNAENACPVPYRLIPAHDPQGNYHYPDQKWADPDIDEAARWLRLLRADPALRQRLGNRAKTDASQFSQHTYHAQ 480
            LI+K +N  VWP+GVR +  A GGA NI++   V+    + ++   ADVV+SLHRAEG GL  AE ML G PVIATDWS + DFL  E   PV Y L+P +DPQG Y     +WA+ D+  AA  L+ LRADPA RQRLG  A   A++F     +AQ
Sbjct:  239 LIVKYMNAFVWPDGVRLMEEAAGGAANIELTGGVLDEAGMDALYGRADVVMSLHRAEGLGLPVAEGMLRGLPVIATDWSGSADFLTRETGVPVNYELVPVNDPQGKYTGSGVRWAEADVGAAAAALQALRADPAWRQRLGAAAAAHATEFFLPQRYAQ 396          
BLAST of mRNA_P-wetherbeei_contig21229.1.1 vs. uniprot
Match: UPI001AC6062A (Glycosyltransferase family 4 protein n=2 Tax=Microvirga sp. 3-52 TaxID=2792425 RepID=UPI001AC6062A)

HSP 1 Score: 147 bits (372), Expect = 4.110e-40
Identity = 77/166 (46.39%), Postives = 105/166 (63.25%), Query Frame = 1
Query:    7 LIIKMLNPEVWPEGVRRLHAAIGGARNIKIVTQVMTRGDVFSMLAAADVVVSLHRAEGFGLLAAEAMLLGKPVIATDWSATTDFLNAENACPVPYRLIPAHDPQGNYHYPDQKWADPDIDEAARWLRLLRADPALRQRLGNRAKTDASQ-FSQHTYHAQMRRALSL 501
            LI+K  N   +P   + +  A GGA N+  +   +    + ++ A ADV++SLHRAEGFGL+ AE ML G PVIAT+WS  TDFL  E   PV Y L+PAHDPQ  Y +P   WA+ +ID+AA  L+ LRA+P LR+ LG  A+T A+  FS   Y A+++  L+L
Sbjct:  192 LIVKYANAFSYPRAAQLMEDAAGGAPNVTFIRDTIDSAGIDALYADADVIISLHRAEGFGLVVAEGMLRGIPVIATNWSGNTDFLTPETGVPVKYTLVPAHDPQDTYEHPAMHWAEANIDQAAEALKTLRANPDLRRTLGLAARTHATALFSPRAYGARIKELLAL 357          
BLAST of mRNA_P-wetherbeei_contig21229.1.1 vs. uniprot
Match: UPI001B8BBFCF (glycosyltransferase family 4 protein n=1 Tax=Gluconobacter sp. Dm-62 TaxID=2799804 RepID=UPI001B8BBFCF)

HSP 1 Score: 147 bits (372), Expect = 9.110e-40
Identity = 74/144 (51.39%), Postives = 104/144 (72.22%), Query Frame = 1
Query:    7 LIIKMLNPEVWPEGVRRLHAAIGGARNIKIVTQVMTRGDVFSMLAAADVVVSLHRAEGFGLLAAEAMLLGKPVIATDWSATTDFLNAENACPVPYRLIPAHDPQGNYHYPDQKWADPDIDEAARWLRLLRADPALRQRLGNRAK 438
            L++K+ + E +P+ +  + AAIGGA NI+I T  ++  D  ++ A AD+V+SLHR+EGFGL+ AEAM LG+ VIATDWSATT+FL+     PV Y L+PA DP+G +  PD++WA P+ID+AA+ LR+   DP LR RLG  A+
Sbjct:  231 LVMKVGHTEHYPDDLAAIRAAIGGAPNIRIETGQLSGADRLALTACADIVLSLHRSEGFGLVVAEAMALGRCVIATDWSATTEFLDVSCGLPVSYTLVPARDPRGIWDMPDKQWALPNIDDAAQALRIAAEDPDLRSRLGTNAR 374          
BLAST of mRNA_P-wetherbeei_contig21229.1.1 vs. uniprot
Match: A0A2U1WT07_9PROT (Uncharacterized protein n=2 Tax=Azospirillum sp. TSO22-1 TaxID=716789 RepID=A0A2U1WT07_9PROT)

HSP 1 Score: 147 bits (372), Expect = 1.330e-39
Identity = 75/149 (50.34%), Postives = 102/149 (68.46%), Query Frame = 1
Query:    1 ACLIIKMLNPEVWPEGVRRLHAAIGGARNIKIVTQVMTRGDVFSMLAAADVVVSLHRAEGFGLLAAEAMLLGKPVIATDWSATTDFLNAENACPVPYRLIPAHDPQGNYHYPDQKWADPDIDEAARWLRLLRADPALRQRLGNRAKTDA 447
            A L++K+++  V P   RRL  A+ GA NI++V Q +T G+V ++LA ADVV+SLHRAEGFGL+ A+ M LG+ V+AT WS   DF++A+ +  V YR++P  DPQG Y    Q WADPD++EAA  L+ LR DP  R+ LG RA   A
Sbjct:  245 AVLVLKVVDAAVAPWARRRLEEAVAGAGNIRVVEQRLTGGEVTALLACADVVLSLHRAEGFGLVPAQGMQLGRAVVATGWSGNLDFMDADTSVLVGYRMVPVDDPQGTYDVAGQMWADPDVEEAAAALKALRDDPERRRALGARAARKA 393          
BLAST of mRNA_P-wetherbeei_contig21229.1.1 vs. uniprot
Match: A0A370HIW4_9HYPH (Glycosyltransferase involved in cell wall biosynthesis n=1 Tax=Microvirga subterranea TaxID=186651 RepID=A0A370HIW4_9HYPH)

HSP 1 Score: 147 bits (370), Expect = 3.010e-39
Identity = 74/152 (48.68%), Postives = 97/152 (63.82%), Query Frame = 1
Query:    1 ACLIIKMLNPEVWPEGVRRLHAAIGGARNIKIVTQVMTRGDVFSMLAAADVVVSLHRAEGFGLLAAEAMLLGKPVIATDWSATTDFLNAENACPVPYRLIPAHDPQGNYHYPDQKWADPDIDEAARWLRLLRADPALRQRLGNRAKTDASQF 456
            A LI+K +N   WPEGVR L  A GGA NI+++  V+    + ++    DVV+SLHRAEG GL  AE M+ G PV+AT WS + DFL  E   PV + L+P  DPQG Y   +  WA+ D+ EAA  LR+LR+DP LRQRLG  A   A+++
Sbjct:  242 ARLIVKYMNAFAWPEGVRLLEEAAGGAGNIELIGDVLDESGMSALYKRTDVVISLHRAEGLGLPIAEGMMRGLPVVATAWSGSVDFLTPETGVPVSFELVPVKDPQGKYTDSELLWAEADVGEAAAALRMLRSDPVLRQRLGAAAAAHAARY 393          
BLAST of mRNA_P-wetherbeei_contig21229.1.1 vs. uniprot
Match: Q5FNK2_GLUOX (Mannosyltransferase n=29 Tax=Acetobacteraceae TaxID=433 RepID=Q5FNK2_GLUOX)

HSP 1 Score: 144 bits (363), Expect = 7.480e-39
Identity = 74/144 (51.39%), Postives = 99/144 (68.75%), Query Frame = 1
Query:    7 LIIKMLNPEVWPEGVRRLHAAIGGARNIKIVTQVMTRGDVFSMLAAADVVVSLHRAEGFGLLAAEAMLLGKPVIATDWSATTDFLNAENACPVPYRLIPAHDPQGNYHYPDQKWADPDIDEAARWLRLLRADPALRQRLGNRAK 438
            L++K+ + E +P+ + ++ AA GGA NI+I T  ++  D  ++   AD+V+SLHR+EGFGL+ AEAM LG+ VIATDWSATT+FL+     PVPY L+PA DP+G +  PD KWA PD D A   LR   ADP LR RLG  A+
Sbjct:  184 LLMKIGHTEHYPDDLAQIRAATGGAPNIRIETGQLSGADRLALTVCADIVLSLHRSEGFGLVVAEAMALGRCVIATDWSATTEFLDGTCGLPVPYTLVPARDPRGIWDMPDTKWALPDRDAAVTALRAAAADPELRSRLGANAR 327          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21229.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TRP7_9PROT5.840e-7065.87Glycosyl transferase, group 1 n=1 Tax=Alphaproteob... [more]
A0A5N3PJ02_9HYPH2.100e-4450.63Glycosyltransferase family 4 protein n=1 Tax=Micro... [more]
A0A1W6ZXU1_9HYPH2.600e-4146.84Glycos_transf_1 domain-containing protein n=1 Tax=... [more]
UPI0014302AF21.380e-4051.72glycosyltransferase family 4 protein n=1 Tax=Vitre... [more]
A0A512BZ61_9HYPH2.540e-4050.00Glycosyl transferase n=1 Tax=Microvirga aerophila ... [more]
UPI001AC6062A4.110e-4046.39Glycosyltransferase family 4 protein n=2 Tax=Micro... [more]
UPI001B8BBFCF9.110e-4051.39glycosyltransferase family 4 protein n=1 Tax=Gluco... [more]
A0A2U1WT07_9PROT1.330e-3950.34Uncharacterized protein n=2 Tax=Azospirillum sp. T... [more]
A0A370HIW4_9HYPH3.010e-3948.68Glycosyltransferase involved in cell wall biosynth... [more]
Q5FNK2_GLUOX7.480e-3951.39Mannosyltransferase n=29 Tax=Acetobacteraceae TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig21229contigP-wetherbeei_contig21229:675..1178 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog420324.KI911961_gene1880
PFAMsGlyco_trans_1_4,Glycos_transf_1
Model size504
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.11e-39
EggNOG OGsCOG0438@1|root,COG0438@2|Bacteria,1RF3D@1224|Proteobacteria,2U86H@28211|Alphaproteobacteria,1JZ1E@119045|Methylobacteriaceae
DescriptionGlycosyl transferases group 1
Cds size486
COG categoryM
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186219.576746-CDS-P-wetherbeei_contig21229:674..11601683186219.576746-CDS-P-wetherbeei_contig21229:674..1160Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig21229 675..1160 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186219.5864272-UTR-P-wetherbeei_contig21229:1160..11781683186219.5864272-UTR-P-wetherbeei_contig21229:1160..1178Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig21229 1161..1178 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig21229.1.1prot_P-wetherbeei_contig21229.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig21229 675..1160 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig21229.1.1

>prot_P-wetherbeei_contig21229.1.1 ID=prot_P-wetherbeei_contig21229.1.1|Name=mRNA_P-wetherbeei_contig21229.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=162bp
MLNPEVWPEGVRRLHAAIGGARNIKIVTQVMTRGDVFSMLAAADVVVSLH
RAEGFGLLAAEAMLLGKPVIATDWSATTDFLNAENACPVPYRLIPAHDPQ
GNYHYPDQKWADPDIDEAARWLRLLRADPALRQRLGNRAKTDASQFSQHT
YHAQMRRALSL*
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mRNA from alignment at P-wetherbeei_contig21229:675..1178-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig21229.1.1 ID=mRNA_P-wetherbeei_contig21229.1.1|Name=mRNA_P-wetherbeei_contig21229.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=504bp|location=Sequence derived from alignment at P-wetherbeei_contig21229:675..1178- (Phaeothamnion wetherbeei SAG_119_79)
GCTTGTTTGATCATCAAGATGCTGAACCCCGAAGTGTGGCCTGAAGGCGT ACGCCGCCTGCATGCCGCCATCGGTGGGGCCAGGAATATAAAGATTGTGA CGCAGGTGATGACGCGCGGCGATGTATTCTCCATGCTGGCGGCGGCGGAT GTTGTTGTATCGCTGCATCGCGCCGAAGGATTCGGGTTGCTGGCGGCGGA AGCGATGCTGCTGGGCAAACCCGTCATCGCCACGGATTGGTCGGCGACCA CTGATTTCCTGAATGCGGAAAATGCCTGTCCGGTTCCTTACAGACTGATT CCGGCGCACGACCCGCAGGGTAATTATCATTACCCGGATCAAAAATGGGC GGATCCCGACATTGATGAGGCCGCGCGATGGCTGCGTCTGCTGCGGGCTG ATCCTGCTCTGCGCCAGCGTCTGGGAAATCGCGCCAAAACAGACGCCAGC CAATTCAGTCAGCACACCTATCATGCGCAAATGCGGCGCGCACTTTCCCT TTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig21229:675..1178-

>mRNA_P-wetherbeei_contig21229.1.1 ID=mRNA_P-wetherbeei_contig21229.1.1|Name=mRNA_P-wetherbeei_contig21229.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=486bp|location=Sequence derived from alignment at P-wetherbeei_contig21229:675..1178- (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGAACCCCGAAGTGTGGCCTGAAGGCGTACGCCGCCTGCATGCCGC
CATCGGTGGGGCCAGGAATATAAAGATTGTGACGCAGGTGATGACGCGCG
GCGATGTATTCTCCATGCTGGCGGCGGCGGATGTTGTTGTATCGCTGCAT
CGCGCCGAAGGATTCGGGTTGCTGGCGGCGGAAGCGATGCTGCTGGGCAA
ACCCGTCATCGCCACGGATTGGTCGGCGACCACTGATTTCCTGAATGCGG
AAAATGCCTGTCCGGTTCCTTACAGACTGATTCCGGCGCACGACCCGCAG
GGTAATTATCATTACCCGGATCAAAAATGGGCGGATCCCGACATTGATGA
GGCCGCGCGATGGCTGCGTCTGCTGCGGGCTGATCCTGCTCTGCGCCAGC
GTCTGGGAAATCGCGCCAAAACAGACGCCAGCCAATTCAGTCAGCACACC
TATCATGCGCAAATGCGGCGCGCACTTTCCCTTTAG
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