mRNA_P-wetherbeei_contig21221.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig21221.1.1 vs. uniprot
Match: A0A6J5IWM0_9BURK (TIR domain-containing protein n=1 Tax=Burkholderia aenigmatica TaxID=2015348 RepID=A0A6J5IWM0_9BURK) HSP 1 Score: 322 bits (825), Expect = 6.260e-109 Identity = 150/213 (70.42%), Postives = 178/213 (83.57%), Query Frame = 1
Query: 1 VHLSKIYKDEAKYCLMLVSGHYAKKQWTSHERRAAQARAFAENSEYILPLRLDDAQVDGILDTVGFLDYRKVTEERIVDSVVHKVHEYNKAHGIAYEPIKVEDVFAKQGIGPKGGRPIKDSDMKTTCPACGMAQLLSDATLQLDDSETIYTCKNGCQPLVVVGRPGVVAWPGRGYRLGDHVIRNVRNIIVKTEDMSVALVLDARDAALMKKRP 639
VHL+KIYKDEAKYCLMLVS +YAKKQWT+HER+AAQARAFAEN EYILPLRLDDA VDGILDT G++DYRK+ E+I++ + K+H+YNKAHGI YE +++EDVF KQ IG PI+DSDM T CPAC Q LSDA L L+ ETIYTC+NGCQPLVV+GRPG VAWPGRGYRLGD+V+RNVR+I+VKTE M A+ ++A +AALMK RP
Sbjct: 49 VHLTKIYKDEAKYCLMLVSENYAKKQWTNHERKAAQARAFAENREYILPLRLDDASVDGILDTTGYIDYRKIELEKIIEIISSKIHDYNKAHGITYEIVRIEDVFQKQKIGADQPHPIRDSDMTTVCPACNTTQRLSDAHLSLNGDETIYTCRNGCQPLVVIGRPGEVAWPGRGYRLGDYVVRNVRDILVKTESMGAAICINASNAALMKTRP 261
BLAST of mRNA_P-wetherbeei_contig21221.1.1 vs. uniprot
Match: UPI0002D1CC84 (TIR domain-containing protein n=1 Tax=Pseudomonas putida TaxID=303 RepID=UPI0002D1CC84) HSP 1 Score: 295 bits (755), Expect = 2.850e-98 Identity = 138/213 (64.79%), Postives = 171/213 (80.28%), Query Frame = 1
Query: 4 HLSKIYKDEAKYCLMLVSGHYAKKQWTSHERRAAQARAFAENSEYILPLRLDDAQVDGILDTVGFLDYRKVTEERIVDSVVHKVHEYNKAHGIAYEPIKVEDVFAKQGIGPKGGRPIKDSDMKTTCPACGMAQLLSDATLQLDDSETIYTCKNGCQPLVVVGRPGVVAWPGRGYRLG-DHVIRNVRNIIVKTEDMSVALVLDARDAALMKKRP 639
HLSK+YKD++KYCLML+S HYAKKQWTSHERRAAQARAFAE+ EYILPLRLDD+ ++G+LDT G+LDYR+ E+IV+S++ KV +YNKAH I YE +V+D FA + G PI DSD++TTCPAC QLLS AT+ LD+++T+YTCKNGC PLVVV RPG+ WPGRGY L +H IRNVR+I +KT DM+V V++A AALMKKRP
Sbjct: 50 HLSKVYKDDSKYCLMLISEHYAKKQWTSHERRAAQARAFAESREYILPLRLDDSAIEGVLDTTGYLDYRRFPIEKIVESLITKVRDYNKAHDIVYEIFRVQDEFAATDLKSPSGNPILDSDLRTTCPACHTEQLLSQATIALDEADTVYTCKNGCMPLVVVSRPGLSPWPGRGYVLSPNHAIRNVRDITIKTPDMAVTTVINASSAALMKKRP 262
BLAST of mRNA_P-wetherbeei_contig21221.1.1 vs. uniprot
Match: A0A1I4U5G0_9PROT (Uncharacterized protein n=2 Tax=Nitrosomonas communis TaxID=44574 RepID=A0A1I4U5G0_9PROT) HSP 1 Score: 291 bits (746), Expect = 7.530e-98 Identity = 135/198 (68.18%), Postives = 163/198 (82.32%), Query Frame = 1
Query: 46 MLVSGHYAKKQWTSHERRAAQARAFAENSEYILPLRLDDAQVDGILDTVGFLDYRKVTEERIVDSVVHKVHEYNKAHGIAYEPIKVEDVFAKQGIGPKGGRPIKDSDMKTTCPACGMAQLLSDATLQLDDSETIYTCKNGCQPLVVVGRPGVVAWPGRGYRLGDHVIRNVRNIIVKTEDMSVALVLDARDAALMKKRP 639
ML+S YAKKQWTSHER+AAQARAF EN EYILPLRLDD ++DGILDT G++DYRKV E+++D +V K+++YN+ +GI YE +KVEDVF KQ IG GRPI D DM T CPACG QLLS+A+L LD+ +TIYTCKNGCQP+VVV RPG+VAWPGRGYRLG+H IRN RNI VKTE+M V ++++A AALMK RP
Sbjct: 1 MLLSESYAKKQWTSHERKAAQARAFTENREYILPLRLDDTKIDGILDTTGYIDYRKVHLEKVIDLIVKKIYQYNRDNGITYEIVKVEDVFQKQAIGVNRGRPITDKDMTTECPACGTMQLLSEASLSLDEDDTIYTCKNGCQPIVVVSRPGLVAWPGRGYRLGEHAIRNTRNIYVKTENMRVPMIINASKAALMKLRP 198
BLAST of mRNA_P-wetherbeei_contig21221.1.1 vs. uniprot
Match: UPI001592B098 (TIR domain-containing protein n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=UPI001592B098) HSP 1 Score: 293 bits (749), Expect = 2.180e-97 Identity = 138/213 (64.79%), Postives = 174/213 (81.69%), Query Frame = 1
Query: 1 VHLSKIYKDEAKYCLMLVSGHYAKKQWTSHERRAAQARAFAENSEYILPLRLDDAQVDGILDTVGFLDYRKVTEERIVDSVVHKVHEYNKAHGIAYEPIKVEDVFAKQGIGPKGGRPIKDSDMKTTCPACGMAQLLSDATLQLDDSETIYTCKNGCQPLVVVGRPGVVAWPGRGYRLGDHVIRNVRNIIVKTEDMSVALVLDARDAALMKKRP 639
VHL+KIY+DE+K+CLM++S Y KKQWT+HER+AAQARAF ENSEYILPLRLDDA+++GIL T G++DYR+V+ ERI+D +V KV +YNK +GIAYE +K E VF ++ + K GRP +DSDM T CPAC Q LS+ATL LDD +TIYTCKNGCQPL+V+ RPG+VAWPGRG+RL D+VIRNVR I +KTE+M +++ A AALMK RP
Sbjct: 49 VHLTKIYRDESKFCLMVISEDYTKKQWTNHERKAAQARAFQENSEYILPLRLDDAEIEGILGTTGYIDYRQVSLERIIDLLVEKVIQYNKDNGIAYEIVKAETVF-ERALDFKDGRPFRDSDMNTECPACNTPQNLSEATLSLDDDDTIYTCKNGCQPLLVICRPGMVAWPGRGFRLKDYVIRNVRGITIKTENMGAPILIPASQAALMKVRP 260
BLAST of mRNA_P-wetherbeei_contig21221.1.1 vs. uniprot
Match: Q31IR1_HYDCU (Uncharacterized protein containing a TIR (Toll-Interleukin 1-resistance) domain n=1 Tax=Hydrogenovibrio crunogenus (strain DSM 25203 / XCL-2) TaxID=317025 RepID=Q31IR1_HYDCU) HSP 1 Score: 276 bits (706), Expect = 7.430e-91 Identity = 131/212 (61.79%), Postives = 164/212 (77.36%), Query Frame = 1
Query: 1 VHLSKIYKDEAKYCLMLVSGHYAKKQWTSHERRAAQARAFAENSEYILPLRLDDAQVDGILDTVGFLDYRKVTEERIVDSVVHKVHEYNKAHGIAYEPIKVEDVFAKQGIGPKGGRPIKDSDMKTTCPACGMAQLLSDATLQLDDSETIYTCKNGCQPLVVVGRPGVVAWPGRGYRLGDHVIRNVRNIIVKTEDMSVALVLDARDAALMKKR 636
VHL+KIY+D++K+CLM++S Y KKQWT+HER+AAQARAF EN EYILPLRLDDA++DGIL T G++DYR + + I+D + KV +YNK +GIAY+ +K E VF +Q I KG +DSDM T CPAC Q LS+ATL LD +TIYTCKNGCQPLVV+ RPG+VAWPGRG RL D+VIRNVR I +KTE M + +++ A AALMK R
Sbjct: 49 VHLTKIYRDDSKFCLMVISEDYVKKQWTNHERKAAQARAFNENREYILPLRLDDAEIDGILGTTGYIDYRNTSVDHIIDLLTEKVIQYNKENGIAYKIVKAETVF-QQAIDFKGNSAFRDSDMNTECPACCTQQKLSEATLSLDGDDTIYTCKNGCQPLVVISRPGIVAWPGRGVRLQDYVIRNVREITIKTESMGMPMLIPASKAALMKMR 259
BLAST of mRNA_P-wetherbeei_contig21221.1.1 vs. uniprot
Match: UPI000B10A5D4 (TIR domain-containing protein n=1 Tax=Hymenobacter coccineus TaxID=1908235 RepID=UPI000B10A5D4) HSP 1 Score: 264 bits (675), Expect = 6.600e-86 Identity = 119/212 (56.13%), Postives = 163/212 (76.89%), Query Frame = 1
Query: 4 HLSKIYKDEAKYCLMLVSGHYAKKQWTSHERRAAQARAFAENSEYILPLRLDDAQVDGILDTVGFLDYRKVTEERIVDSVVHKVHEYNKAHGIAYEPIKVEDVFAKQGIGPKGGRPIKDSDMKTTCPACGMAQLLSDATLQLDDSETIYTCKNGCQPLVVVGRPGVVAWPGRGYRLGDHVIRNVRNIIVKTEDMSVALVLDARDAALMKKRP 639
HL KIY+D++KY LM++S YAKKQWT+HER+AAQ+RAFAEN EYILPLRLD+ +++G+L+T G++DY+K E I+D + K+++YNK + I+Y +E+VFAKQ I G P+KD D T CP C + Q LSD+ + LD+ +TIYTCKNGCQPLV++ RPG+VAWPGRGY+LG+HV+RN +++++K AL L A AALMKK+P
Sbjct: 67 HLIKIYRDDSKYYLMILSESYAKKQWTNHERKAAQSRAFAENQEYILPLRLDETEIEGVLNTTGYIDYKKTDIEEIIDLITKKIYKYNKDNNISYSITYLEEVFAKQYIDANGV-PLKDKDFTTQCPTCQIKQNLSDSVVSLDNDDTIYTCKNGCQPLVIISRPGIVAWPGRGYKLGNHVVRNAQDLLIKANSTGAALSLLASKAALMKKKP 277
BLAST of mRNA_P-wetherbeei_contig21221.1.1 vs. uniprot
Match: UPI001BA5227E (TIR domain-containing protein n=1 Tax=Moritella sp. 28 TaxID=2746232 RepID=UPI001BA5227E) HSP 1 Score: 262 bits (670), Expect = 2.170e-85 Identity = 121/210 (57.62%), Postives = 160/210 (76.19%), Query Frame = 1
Query: 1 VHLSKIYKDEAKYCLMLVSGHYAKKQWTSHERRAAQARAFAENSEYILPLRLDDAQVDGILDTVGFLDYRKVTEERIVDSVVHKVHEYNKAHGIAYEPIKVEDVFAKQGIGPKGGRPIKDSDMKTTCPACGMAQLLSDATLQLDDSETIYTCKNGCQPLVVVGRPGVVAWPGRGYRLGDHVIRNVRNIIVKTEDMSVALVLDARDAALMK 630
VHL+KIY+DE+KYCLML+S +YAKKQWT+HER+AAQARAF ENSEYILPLRLDDA++DGIL T G++DYR + E+I+ + KV ++NK + I Y+ + E VF K+ + KG + +D DM T CP C Q L++AT+ L D ET+YTC+NGCQ +VV+ RPG+ AWPGRGYRL D+VIRN R+I +KT M + +++ A AALMK
Sbjct: 49 VHLTKIYRDESKYCLMLISENYAKKQWTNHERKAAQARAFQENSEYILPLRLDDAEIDGILGTTGYIDYRHCSLEKIISMLAEKVFQFNKLNNIYYDLVSAESVF-KKSLDFKGKQAFQDKDMVTDCPTCNEQQTLAEATMSLADDETLYTCRNGCQAIVVISRPGISAWPGRGYRLKDYVIRNARDITIKTNSMGMPILIPASKAALMK 257
BLAST of mRNA_P-wetherbeei_contig21221.1.1 vs. uniprot
Match: A0A2G2M3M1_9PROT (TIR domain-containing protein n=1 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2M3M1_9PROT) HSP 1 Score: 229 bits (584), Expect = 2.110e-72 Identity = 108/212 (50.94%), Postives = 148/212 (69.81%), Query Frame = 1
Query: 4 HLSKIYKDEAKYCLMLVSGHYAKKQWTSHERRAAQARAFAENSEYILPLRLDDAQVDGILDTVGFLDYRKVTEERIVDSVVHKVHEYNKAHGIAYEPIKVEDVFAKQGIGPKGGRPIKDSDMKTTCPACGMAQLLSDATLQLDDSETIYTCKNGCQPLVVVGRPGVVAWPGRGYRLGDHVIRNVRNIIVKTEDMSVALVLDARDAALMKKRP 639
HL KIY+DEAKYCL+L+S +YAKK WT+HERRAAQ RA EN EYILPL+LDD +DGILDTVG+++Y E I++ + K+ ++N+ HGI Y I++ V + P+ +D T CP C Q L++ LQLD+ +T+Y CKNGCQP++V+ RP +VAWPGRGYR+G+ VIRN +I+++T +M + AR AALMK +P
Sbjct: 50 HLIKIYRDEAKYCLILISNNYAKKLWTNHERRAAQTRAIKENCEYILPLKLDDTDIDGILDTVGYIEYNHTKFEEIINLIEEKIQKFNEDHGIDYSIIELATVL--KDAFPE----FTAADATTKCPTCETYQSLTETKLQLDNGDTLYICKNGCQPIIVISRPEIVAWPGRGYRIGNFVIRNASDILIQTNEMKNPFKILARKAALMKAKP 255
BLAST of mRNA_P-wetherbeei_contig21221.1.1 vs. uniprot
Match: A0A356P663_9FIRM (Uncharacterized protein n=1 Tax=Desulfosporosinus sp. TaxID=157907 RepID=A0A356P663_9FIRM) HSP 1 Score: 115 bits (287), Expect = 2.410e-29 Identity = 55/112 (49.11%), Postives = 70/112 (62.50%), Query Frame = 1
Query: 295 IKVEDVFAKQGIGPKGGRPIKDSDMKTTCPACGMAQLLSDATLQLDDSETIYTCKNGCQPLVVVGRPGVVAWPGRGYRLGDHVIRNVRNIIVKTEDMSVALVLDARDAALMK 630
++VE+VFA Q PKGG +D D+ T CP C Q L +A + LD +TIY CKNGCQP+VVVG PG WP R YRLG HVI N +++ K + +V A AALM+
Sbjct: 5 VRVEEVFADQLHAPKGGTLPRDCDITTQCPTCAQVQTLQEAEVFLDGDDTIYLCKNGCQPIVVVGPPGGSPWPERSYRLGQHVIVNAKDLFFKVSNALGEIVFPASLAALME 116
BLAST of mRNA_P-wetherbeei_contig21221.1.1 vs. uniprot
Match: A0A1M6J925_9FIRM (Uncharacterized protein n=1 Tax=Desulfofundulus thermosubterraneus DSM 16057 TaxID=1121432 RepID=A0A1M6J925_9FIRM) HSP 1 Score: 114 bits (285), Expect = 1.030e-27 Identity = 57/128 (44.53%), Postives = 75/128 (58.59%), Query Frame = 1
Query: 277 GIAY-------EPIKVEDVFAKQGIGPKGGRPIKDSDMKTTCPACGMAQLLSDATLQLDDSETIYTCKNGCQPLVVVGRPGVVAWPGRGYRLGDHVIRNVRNIIVKTEDMSVALVLDARDAALMKKRP 639
GIAY E ++VEDV Q P G R D ++ TTCP CG+ Q L+ A + D T+YTC +GCQ +VVVG P W GRGYRLGDHVIRN +++ + +++ A ALMK+RP
Sbjct: 106 GIAYIGLALIPELVRVEDVLVGQLTAPAGTRLPTDKEVYTTCPTCGIRQTLAQAKISRDGKNTVYTCMHGCQTIVVVGEPEDAPWEGRGYRLGDHVIRNAQDMYLPIIGTGKEVLIPASKGALMKQRP 233 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21221.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig21221.1.1 >prot_P-wetherbeei_contig21221.1.1 ID=prot_P-wetherbeei_contig21221.1.1|Name=mRNA_P-wetherbeei_contig21221.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=216bp VHLSKIYKDEAKYCLMLVSGHYAKKQWTSHERRAAQARAFAENSEYILPLback to top mRNA from alignment at P-wetherbeei_contig21221:2..649+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig21221.1.1 ID=mRNA_P-wetherbeei_contig21221.1.1|Name=mRNA_P-wetherbeei_contig21221.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=648bp|location=Sequence derived from alignment at P-wetherbeei_contig21221:2..649+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig21221:2..649+ >mRNA_P-wetherbeei_contig21221.1.1 ID=mRNA_P-wetherbeei_contig21221.1.1|Name=mRNA_P-wetherbeei_contig21221.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=648bp|location=Sequence derived from alignment at P-wetherbeei_contig21221:2..649+ (Phaeothamnion wetherbeei SAG_119_79)back to top |