mRNA_P-wetherbeei_contig21142.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig21142.1.1 vs. uniprot
Match: A0A3D2W044_9PROT (Uncharacterized protein n=1 Tax=Hyphomonadaceae bacterium TaxID=2026748 RepID=A0A3D2W044_9PROT) HSP 1 Score: 145 bits (367), Expect = 9.890e-43 Identity = 77/124 (62.10%), Postives = 94/124 (75.81%), Query Frame = 1
Query: 4 MSLLVDNMQWVLLACGLLTFSMIQAVFAPRATMRAYFGETVESPASVLITRNWGALIAAGGLLLVYVAFYPEARSVALIFVGAGKLVFIALVLSKGQAFLKKQAGLAVVLDSLMVALFAAYLTA 375
MS +VDNMQW++LA GLLT +M QAVFAPRA A FGE + A+ L+ RNWG LI GG +L+Y AF PE R + LIF GAGK +FI LVL+ G FL++QAG+AV+LDS+MVALFAAYL A
Sbjct: 1 MSFIVDNMQWIMLASGLLTLTMAQAVFAPRAAALAIFGEDISGAAAELVVRNWGGLITGGGAMLIYAAFNPEWRPLVLIFTGAGKAMFIVLVLAHGGKFLQRQAGIAVMLDSVMVALFAAYLAA 124
BLAST of mRNA_P-wetherbeei_contig21142.1.1 vs. uniprot
Match: A0A7S9GJM6_9BURK (Uncharacterized protein n=1 Tax=Kinneretia sp. DAIF2 TaxID=2714952 RepID=A0A7S9GJM6_9BURK) HSP 1 Score: 122 bits (306), Expect = 2.140e-33 Identity = 68/127 (53.54%), Postives = 89/127 (70.08%), Query Frame = 1
Query: 4 MSLLVDNMQWVLLACGLLTFSMIQAVFAPRATMRAYFGETVES-PASVLITRNWGALIAAGGLLLVYVAFYPEARSVALIFVGAGKLVFIALVLSKGQAFLKKQAGLAVVLDSLMVALFAAYLTATR 381
M+ LV M+W++LA GLLT +M+QA AP A +RA FGE +E+ P + ++ RNWGALIA G +LVY AF P+ R + L+ G KLVFIAL+L G +L QAGLA+ +D+LMV LFAAYL R
Sbjct: 1 MAWLVARMKWIMLASGLLTLTMLQAAIAPAAALRALFGEAIEAGPLAEIVVRNWGALIALIGAMLVYGAFRPQVRGLVLVVAGLSKLVFIALMLGLGGRYLGHQAGLAIAIDALMVLLFAAYLLTGR 127
BLAST of mRNA_P-wetherbeei_contig21142.1.1 vs. uniprot
Match: UPI0015581ED3 (hypothetical protein n=1 Tax=Permianibacter fluminis TaxID=2738515 RepID=UPI0015581ED3) HSP 1 Score: 116 bits (290), Expect = 5.890e-31 Identity = 60/126 (47.62%), Postives = 87/126 (69.05%), Query Frame = 1
Query: 4 MSLLVDNMQWVLLACGLLTFSMIQAVFAPRATMRAYFGETVESPASVLITRNWGALIAAGGLLLVYVAFYPEARSVALIFVGAGKLVFIALVLSKGQAFLKKQAGLAVVLDSLMVALFAAYLTATR 381
MS + N +W +L GLLT +M+QA FAP+A +R+ FG+++E P + ++ RNWGALIA G +L+Y AF P R + L G K+VFI+L+L+ G +L K G+AV++DSLM+ LF AYL +R
Sbjct: 1 MSWFIRNFKWAMLVSGLLTLTMVQAAFAPQAALRSTFGDSLEGPLAEIVVRNWGALIALIGAMLIYGAFRPHVRRLVLAVAGTSKVVFISLILTYGTQYLGK-VGIAVIVDSLMIVLFTAYLVVSR 125
BLAST of mRNA_P-wetherbeei_contig21142.1.1 vs. uniprot
Match: A0A317HMB6_9BACT (Uncharacterized protein n=1 Tax=Blastocatellia bacterium TaxID=2052146 RepID=A0A317HMB6_9BACT) HSP 1 Score: 114 bits (286), Expect = 2.600e-30 Identity = 63/126 (50.00%), Postives = 84/126 (66.67%), Query Frame = 1
Query: 4 MSLLVDNMQWVLLACGLLTFSMIQAVFAPRATMRAYFGETVESPASVLITRNWGALIAAGGLLLVYVAFYPEARSVALIFVGAGKLVFIALVLSKGQAFLKKQAGLAVVLDSLMVALFAAYLTATR 381
M +V N++W+++ G LT +MI A AP A +R+ FGET+++P + LI RNWGALI G +L+Y AF P R + L+ K VFIALVLS G +L QAG+AVV+D LM+ LFA YL A R
Sbjct: 1 MGWIVANIRWIMIVSGTLTATMIYAAIAPDAALRSTFGETLDAPLAQLIVRNWGALIGLVGAMLIYGAFDPPGRPLILLVASCSKAVFIALVLSHGTRYLGNQAGMAVVIDLLMIVLFAWYLLAVR 126
BLAST of mRNA_P-wetherbeei_contig21142.1.1 vs. uniprot
Match: UPI0004765EE2 (hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 TaxID=118173 RepID=UPI0004765EE2) HSP 1 Score: 107 bits (267), Expect = 1.850e-27 Identity = 58/126 (46.03%), Postives = 81/126 (64.29%), Query Frame = 1
Query: 4 MSLLVDNMQWVLLACGLLTFSMIQAVFAPRATMRAYFGETVESPASVLITRNWGALIAAGGLLLVYVAFYPEARSVALIFVGAGKLVFIALVLSKGQAFLKKQAGLAVVLDSLMVALFAAYLTATR 381
M+LLV M+WV+L G LT +M A P+A + + FG ++ P + ++ RNWGALIA G +L+Y AF P +R + L G KL+FI LVL G +L +QAGLA+ +D +MV LF +YL A R
Sbjct: 1 MNLLVAKMKWVMLVSGALTCTMFYAAVDPQAALNSMFGAALQGPLAEIVVRNWGALIALVGAMLIYGAFDPPSRPLVLTVAGLSKLIFIGLVLFYGTQYLGQQAGLAIAIDLVMVVLFVSYLVAVR 126
BLAST of mRNA_P-wetherbeei_contig21142.1.1 vs. uniprot
Match: A0A1I3VHH2_9HYPH (Uncharacterized protein n=2 Tax=Mesorhizobium albiziae TaxID=335020 RepID=A0A1I3VHH2_9HYPH) HSP 1 Score: 104 bits (260), Expect = 1.740e-26 Identity = 53/118 (44.92%), Postives = 80/118 (67.80%), Query Frame = 1
Query: 4 MSLLVDNMQWVLLACGLLTFSMIQAVFAPRATMRAYFGETVESPASVLITRNWGALIAAGGLLLVYVAFYPEARSVALIFVGAGKLVFIALVLSKGQAFLKKQAGLAVVLDSLMVALF 357
M L+V W+++A GL+T SM+QAVFAPRA +++ FGE +E P + ++ RNWG LI G+ L+Y L+F GA KL FIALVL++G+ +L ++AG+A+ +D++ V LF
Sbjct: 1 MELIVRFSGWIMIASGLITASMVQAVFAPRAALQSMFGEAIEGPLAEIVVRNWGVLITLVGIALIYGGISSSHTVPILLFAGASKLAFIALVLAQGRRYLSQRAGVAIAIDAVFVLLF 118
BLAST of mRNA_P-wetherbeei_contig21142.1.1 vs. uniprot
Match: UPI001181F795 (hypothetical protein n=1 Tax=Shewanella donghaensis TaxID=238836 RepID=UPI001181F795) HSP 1 Score: 103 bits (258), Expect = 3.810e-26 Identity = 55/126 (43.65%), Postives = 87/126 (69.05%), Query Frame = 1
Query: 4 MSLLVDNMQWVLLACGLLTFSMIQAVFAPRATMRAYFGETVESPASVLITRNWGALIAAGGLLLVYVAFYPEARSVALIFVGAGKLVFIALVLSKGQAFLKKQAGLAVVLDSLMVALFAAYLTATR 381
M L+++N++W++L GLLT SMI AVFAP A + + FGE + P + ++ R+WG LI G+LL+Y AF P R+++L+ VG K+VF+ LVL G +++K A + ++LDS+ + LFA YL+ +
Sbjct: 1 MKLIINNIKWIMLISGLLTCSMILAVFAPEAALISMFGEALTEPVAQVVVRSWGFLIFLMGVLLIYGAFKPMYRNLSLVIVGLSKIVFVLLVLIFGAQYVEK-AAVTLILDSIFITLFALYLSKVK 125
BLAST of mRNA_P-wetherbeei_contig21142.1.1 vs. uniprot
Match: A0A7C3LHN1_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C3LHN1_9BACT) HSP 1 Score: 103 bits (257), Expect = 5.720e-26 Identity = 57/126 (45.24%), Postives = 83/126 (65.87%), Query Frame = 1
Query: 4 MSLLVDNMQWVLLACGLLTFSMIQAVFAPRATMRAYFGETVESPASVLITRNWGALIAAGGLLLVYVAFYPEARSVALIFVGAGKLVFIALVLSKGQAFLKKQAGLAVVLDSLMVALFAAYLTATR 381
M+ L N++WV+L G+LT +M A AP+A + + FGET++ P + ++ RNWGALI G++L++ AF P R++AL G KLVF ALVLS G +L QAG+A+ +D + V +FA YL R
Sbjct: 1 MNFLERNIKWVMLVSGVLTCTMAYAAIAPQAALLSTFGETLQGPLAEVVVRNWGALITLVGVMLIWGAFDPGLRTMALTVAGISKLVFAALVLSHGGRYLGHQAGIAIAVDLVWVVVFAWYLLGAR 126
BLAST of mRNA_P-wetherbeei_contig21142.1.1 vs. uniprot
Match: A0A2V8J269_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8J269_9BACT) HSP 1 Score: 100 bits (249), Expect = 9.280e-25 Identity = 55/111 (49.55%), Postives = 74/111 (66.67%), Query Frame = 1
Query: 49 GLLTFSMIQAVFAPRATMRAYFGETVESPASVLITRNWGALIAAGGLLLVYVAFYPEARSVALIFVGAGKLVFIALVLSKGQAFLKKQAGLAVVLDSLMVALFAAYLTATR 381
G+LT +M+ A AP A +R+ FGE+V P + ++ RNWGALIA G +L+Y A P R +AL GA K +F+ALVLS G FL QAG+AV+ D L + +FAAYL + R
Sbjct: 5 GVLTMTMVYASLAPEAALRSTFGESVSGPVADIVVRNWGALIALVGAMLIYGARKPPVRPMALTVAGASKAIFVALVLSHGGRFLGYQAGIAVLSDVLWIMVFAAYLLSVR 115
BLAST of mRNA_P-wetherbeei_contig21142.1.1 vs. uniprot
Match: A0A1W9IK31_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium HN_bin10 TaxID=1827386 RepID=A0A1W9IK31_9PROT) HSP 1 Score: 100 bits (248), Expect = 1.180e-24 Identity = 55/112 (49.11%), Postives = 75/112 (66.96%), Query Frame = 1
Query: 34 VLLACGLLTFSMIQAVFAPRATMRAYFGETVESPASVLITRNWGALIAAGGLLLVYVAFYPEARSVALIFVGAGKLVFIALVLSKGQAFLKKQAGLAVVLDSLMVALFAAYL 369
V++ GLLT +M+ AP A M+++FGE VES A ++ NWG LI G LL+Y A +P +R +AL+ GA K+ F+ L+LS+GQ FL G AV++DS MV LFAAYL
Sbjct: 9 VMIVSGLLTLTMLYTAIAPSAAMQSFFGEGVESRAVSIVVANWGILIGLMGALLIYGALHPPSRKLALVVAGASKIAFVGLILSQGQLFLDGL-GAAVIIDSAMVVLFAAYL 119 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21142.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig21142.1.1 >prot_P-wetherbeei_contig21142.1.1 ID=prot_P-wetherbeei_contig21142.1.1|Name=mRNA_P-wetherbeei_contig21142.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=127bp MSLLVDNMQWVLLACGLLTFSMIQAVFAPRATMRAYFGETVESPASVLITback to top mRNA from alignment at P-wetherbeei_contig21142:296..679+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig21142.1.1 ID=mRNA_P-wetherbeei_contig21142.1.1|Name=mRNA_P-wetherbeei_contig21142.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=384bp|location=Sequence derived from alignment at P-wetherbeei_contig21142:296..679+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig21142:296..679+ >mRNA_P-wetherbeei_contig21142.1.1 ID=mRNA_P-wetherbeei_contig21142.1.1|Name=mRNA_P-wetherbeei_contig21142.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=381bp|location=Sequence derived from alignment at P-wetherbeei_contig21142:296..679+ (Phaeothamnion wetherbeei SAG_119_79)back to top |