mRNA_P-wetherbeei_contig21135.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig21135.1.1
Unique NamemRNA_P-wetherbeei_contig21135.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig21135.1.1 vs. uniprot
Match: A0A7C3NZ64_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C3NZ64_9PROT)

HSP 1 Score: 390 bits (1001), Expect = 2.470e-133
Identity = 194/298 (65.10%), Postives = 238/298 (79.87%), Query Frame = 1
Query:   46 AQAFPTRPVRIMVGFTPGGLPDITARLIGQKLSETWKQPVTVENRPGAGGNIAAQAVAAAPPDGYTLLSISSAHTSAPAIYPKLPFDVAKDFAGITMTATGPCLLIVAPDLPVKTVADLVALAKAKPGVLNYSSAGIGSGTHFAVETLKAQAGIDVVHVPFKGIPEALAEAVAGRVQFFMAPFATAIGLVKDGRARAIAVTSPKRVGETPNIPTVAESGVPGYKYAIWSGLLAPAKTPRALIEQLNAEVVRILRLPETAQRLAPLGTEAAPGTPDEFDRLIAEEVAGFTRLARAANIK 939
            A  +P RPVRI++GFTPGG+PDITARLI QKL+ETWKQ V V+NR GAGG IAAQ VA + PDGYTLLS+S+AH  A AIY KLP+D  KDFAG+TMTATGP LL+V+P L VKT  DL+ALAKA+PG  N+SSAG+GSGTHFA E  K+ A IDVVH+PFKGIPEA+ E + GRVQFF++P A+AIGLVKDG+A AI V S +RV + PN+PTVAESG+PG+++  W G+LAPAKTPR L+ +LN E+ R+L  P+   RL+ LG E AP TP  FD+ IA+++A  TR+ARAANIK
Sbjct:    9 AAGYPARPVRIVIGFTPGGVPDITARLIAQKLTETWKQQVIVDNRTGAGGTIAAQIVANSNPDGYTLLSVSNAHAVAAAIYTKLPYDTLKDFAGVTMTATGPALLLVSPALGVKTAKDLIALAKARPGQFNFSSAGVGSGTHFAGELFKSMAEIDVVHIPFKGIPEAITETLTGRVQFFLSPLASAIGLVKDGKALAIGVASAQRVPQLPNLPTVAESGLPGFRFEFWYGMLAPAKTPRPLVGRLNREITRVLGHPDVHNRLSGLGAEPAPSTPQAFDKFIADDIATLTRVARAANIK 306          
BLAST of mRNA_P-wetherbeei_contig21135.1.1 vs. uniprot
Match: UPI00155F22AC (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Polynucleobacter sinensis TaxID=1743157 RepID=UPI00155F22AC)

HSP 1 Score: 367 bits (941), Expect = 8.130e-124
Identity = 175/300 (58.33%), Postives = 238/300 (79.33%), Query Frame = 1
Query:   46 AQAFPTRPVRIMVGFTPGGLPDITARLIGQKLSETWKQPVTVENRPGAGGNIAAQAVAAAPPDGYTLLSISSAHTSAPAIYPKLPFDVAKDFAGITMTATGPCLLIVAPDLPVKTVADLVALAKAKPGVLNYSSAGIGSGTHFAVETLKAQAGIDVVHVPFKGIPEALAEAVAGRVQFFMAPFATAIGLVKDGRARAIAVTSPKRVGETPNIPTVAESGVPGYKYAIWSGLLAPAKTPRALIEQLNAEVVRILRLPETAQRLAPLGTEAAPGTPDEFDRLIAEEVAGFTRLARAANIKVE 945
            AQ +P++P++I+VGF+PGG+PDI AR+IGQ +SE+WKQPV VEN+PGAG NIAAQ VA AP DGYTLLSISSA   +P+IY  LPFD  +DF+G+T+TATGP  L+++P+L V TV +L+  A   PG + YSSAG+GSG+HFA E ++A+AG++++H+P KGIP+ + E ++GRV FF++P+A+A+ LV+ G+ RAIAVTS KRV E P +PTVAESG+PGYK+  W GLLAP KTP+ +++++ AEV RIL LPE  +R A LGT A   TPD+FD++IA E+  F+RLA+A+ IK E
Sbjct:   36 AQTYPSQPIKIVVGFSPGGVPDIAARVIGQHMSESWKQPVLVENKPGAGSNIAAQIVAGAPADGYTLLSISSAFAISPSIYSTLPFDPLRDFSGVTLTATGPAFLLISPNLKVNTVKELLEFAAKNPGKVTYSSAGVGSGSHFAAELIQAKAGVELLHIPTKGIPDGITEVMSGRVDFFISPYASAVNLVRAGKVRAIAVTSTKRVKEFPALPTVAESGIPGYKWEFWYGLLAPGKTPKPILQKIYAEVKRILELPEVKERFAELGTVAVSSTPDQFDKMIAAEITEFSRLAKASGIKPE 335          
BLAST of mRNA_P-wetherbeei_contig21135.1.1 vs. uniprot
Match: UPI001BFCE04A (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Polynucleobacter sp. MWH-Aus1W21 TaxID=1855880 RepID=UPI001BFCE04A)

HSP 1 Score: 358 bits (920), Expect = 8.600e-121
Identity = 173/301 (57.48%), Postives = 236/301 (78.41%), Query Frame = 1
Query:   43 TAQAFPTRPVRIMVGFTPGGLPDITARLIGQKLSETWKQPVTVENRPGAGGNIAAQAVAAAPPDGYTLLSISSAHTSAPAIYPKLPFDVAKDFAGITMTATGPCLLIVAPDLPVKTVADLVALAKAKPGVLNYSSAGIGSGTHFAVETLKAQAGIDVVHVPFKGIPEALAEAVAGRVQFFMAPFATAIGLVKDGRARAIAVTSPKRVGETPNIPTVAESGVPGYKYAIWSGLLAPAKTPRALIEQLNAEVVRILRLPETAQRLAPLGTEAAPGTPDEFDRLIAEEVAGFTRLARAANIKVE 945
            +AQ++PT+P++I+VGF+PGG+PDI AR+IGQ +SE WKQPV VEN+ GAG NIAAQ VA AP DGYTLLSISSA   +PAIY  + FD  KDF+GIT+TATGP L++++P+L V T+ +L+  A   PG + YSSAG+GSG+HFA E ++A+AG++++H+P KGIP+A+ E ++GRV FF++P+A+AI LVK G+ RAIA+TS KR  + PN+PTV+ESGVPGYK+  W GL+APAKTP+ +++++ +EV RIL LP   +R   LGT A   TPD+FD+LIA E+  F RLA+ + IK E
Sbjct:   24 SAQSYPTQPIKIVVGFSPGGVPDIAARIIGQHMSENWKQPVVVENKLGAGSNIAAQLVANAPSDGYTLLSISSAFAISPAIYSSMAFDPIKDFSGITLTATGPALVLISPNLKVNTMKELLEYATKYPGKVTYSSAGVGSGSHFAAELIQAKAGVELLHIPTKGIPDAITEVMSGRVDFFISPYASAINLVKSGKVRAIAITSTKRFKDLPNLPTVSESGVPGYKWEFWYGLVAPAKTPKPILQKIASEVKRILELPSVKERFDELGTTAVSSTPDQFDKLIAAEIIEFARLAKLSGIKPE 324          
BLAST of mRNA_P-wetherbeei_contig21135.1.1 vs. uniprot
Match: UPI001C0C19AE (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Polynucleobacter sp. Latsch14-2 TaxID=2576920 RepID=UPI001C0C19AE)

HSP 1 Score: 358 bits (919), Expect = 1.140e-120
Identity = 178/309 (57.61%), Postives = 236/309 (76.38%), Query Frame = 1
Query:   19 LAALPRMGTAQAFPTRPVRIMVGFTPGGLPDITARLIGQKLSETWKQPVTVENRPGAGGNIAAQAVAAAPPDGYTLLSISSAHTSAPAIYPKLPFDVAKDFAGITMTATGPCLLIVAPDLPVKTVADLVALAKAKPGVLNYSSAGIGSGTHFAVETLKAQAGIDVVHVPFKGIPEALAEAVAGRVQFFMAPFATAIGLVKDGRARAIAVTSPKRVGETPNIPTVAESGVPGYKYAIWSGLLAPAKTPRALIEQLNAEVVRILRLPETAQRLAPLGTEAAPGTPDEFDRLIAEEVAGFTRLARAANIKVE 945
            L  LP   +AQ +PT+P++I+VGF+PGG+PDI AR+IGQ +SE WKQPV VEN+ GAG NIAAQ VA AP DGYTLLSISSA   +PAIY  + FD  KDF+G+T+TATGP  L+V+P+L V +V +L+  A   PG + YSSAG+GSG+HFA E ++A+AGI ++H+P KGIP+A+ E ++GRV FF++P+A+AI LV+ G+ RAIAVTS KR+ + P++PTVAESGVPGYK+  W GLLAPAKTP+ +++++ AEV RIL LP   +R   LGT A   TP++FD LIA E+  F RLA+ + IK E
Sbjct:   14 LCLLPLSLSAQTYPTQPIKIVVGFSPGGVPDIAARIIGQHMSEHWKQPVLVENKLGAGSNIAAQVVANAPSDGYTLLSISSAFAISPAIYSSMSFDPLKDFSGVTLTATGPAFLLVSPNLKVNSVKELIDYAAKNPGKVTYSSAGVGSGSHFAAELIQAKAGISLLHIPTKGIPDAITEVMSGRVDFFISPYASAISLVRAGKVRAIAVTSTKRIKDFPSLPTVAESGVPGYKWEFWYGLLAPAKTPKPILQKIYAEVKRILELPSVKERFDELGTTAVSSTPEQFDALIAAEILEFARLAKVSGIKPE 322          
BLAST of mRNA_P-wetherbeei_contig21135.1.1 vs. uniprot
Match: A0A2T7SUP8_9BURK (Uncharacterized protein n=2 Tax=Limnohabitans sp. Rim28 TaxID=1100720 RepID=A0A2T7SUP8_9BURK)

HSP 1 Score: 355 bits (911), Expect = 1.940e-118
Identity = 172/300 (57.33%), Postives = 233/300 (77.67%), Query Frame = 1
Query:   46 AQAFPTRPVRIMVGFTPGGLPDITARLIGQKLSETWKQPVTVENRPGAGGNIAAQAVAAAPPDGYTLLSISSAHTSAPAIYPKLPFDVAKDFAGITMTATGPCLLIVAPDLPVKTVADLVALAKAKPGVLNYSSAGIGSGTHFAVETLKAQAGIDVVHVPFKGIPEALAEAVAGRVQFFMAPFATAIGLVKDGRARAIAVTSPKRVGETPNIPTVAESGVPGYKYAIWSGLLAPAKTPRALIEQLNAEVVRILRLPETAQRLAPLGTEAAPGTPDEFDRLIAEEVAGFTRLARAANIKVE 945
            A  +P +P++I+VGF+PGG+PDI  R++  K +ETWKQPV VENR GAG NIAAQA+A++  DGYTLLS+SSAH  +PAIY KLP+D +KDFAGIT+TATGP L+IV+P+L V  + +L+ALAK+KPG  NYSSAG+GSG+ FA E LK+QAGI + H+PFKGIPEAL + +AGR   F++P+A+AI LV++G+A+AIAVTS  R+ + PN+PTVAESG+PGYK+  W GL+APA TP+ +I+++ AEVV  L+ P   QR + LG E    +P+ FD+L+ +E+  F +LA  A IK +
Sbjct:   93 ATNYPQKPIKILVGFSPGGVPDIIGRVLAPKFTETWKQPVVVENRVGAGSNIAAQALASSAADGYTLLSVSSAHAISPAIYQKLPYDASKDFAGITLTATGPALVIVSPELNVNNMRELIALAKSKPGQFNYSSAGVGSGSQFAAELLKSQAGIQLTHIPFKGIPEALTDTMAGRTHIFISPYASAINLVREGKAKAIAVTSTSRMPDLPNMPTVAESGLPGYKWIFWYGLMAPANTPKDIIQKVQAEVVSALKQPLVTQRFSSLGIEPITNSPEAFDQLVRDEIQLFKKLASDAGIKAD 392          
BLAST of mRNA_P-wetherbeei_contig21135.1.1 vs. uniprot
Match: A0A537CW66_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537CW66_9PROT)

HSP 1 Score: 352 bits (902), Expect = 6.960e-118
Identity = 187/316 (59.18%), Postives = 228/316 (72.15%), Query Frame = 1
Query:    1 LLAATGLAALPRMGTAQA-FPTRPVRIMVGFTPGGLPDITARLIGQKLSETWKQPVTVENRPGAGGNIAAQAVAAAPPDGYTLLSISSAHTSAPAIYPKLPFDVAKDFAGITMTATGPCLLIVAPDLPVKTVADLVALAKAKPGVLNYSSAGIGSGTHFAVETLKAQAGIDVVHVPFKGIPEALAEAVAGRVQFFMAPFATAIGLVKDGRARAIAVTSPKRVGETPNIPTVAESGVPGYKYAIWSGLLAPAKTPRALIEQLNAEVVRILRLPETAQRLAPLGTEAAPGTPDEFDRLIAEEVAGFTRLARAANIKVE 945
            L+A    AA      AQA +P RPV+IMVGFTPGG PDITAR + QKLSE+W Q V VENRPGAGG +AA  VA A PDGYTLLS+SSAH +A AIYPKLP+D   + AGIT T +   +L+V P L VK++ +L+  AKAKPG  N+SSAG+GSGTHFA E  KA A IDVVHVPFKGIPEALAE VAGRVQFFMAP A ++  VKDGR   + V+S +R    P +PTV E+GV GY+  +W GLL  +  PRA+I +LN ++VRIL  P+T  R  P+G E  P  P+ FDR+I EE+A F+R+ARAA+IK E
Sbjct:   21 LMAGLAFAAAAGPSRAQADYPNRPVKIMVGFTPGGGPDITARHVAQKLSESWGQQVIVENRPGAGGTLAAAQVARAAPDGYTLLSVSSAHAAAAAIYPKLPYDTVGELAGITQTGSSKYVLVVPPSLGVKSLRELLDTAKAKPGQFNFSSAGVGSGTHFAAEIFKAMAAIDVVHVPFKGIPEALAETVAGRVQFFMAPIANSVNYVKDGRLLGLGVSSLQRDPLLPEVPTVDEAGVAGYQSELWFGLLTASGVPRAIIAKLNRDIVRILGEPDTRSRWGPIGIEPRPSAPEGFDRMIREEIALFSRIARAASIKAE 336          
BLAST of mRNA_P-wetherbeei_contig21135.1.1 vs. uniprot
Match: UPI001C0C494B (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Polynucleobacter sp. UK-Mo-2m-Kol15 TaxID=2576916 RepID=UPI001C0C494B)

HSP 1 Score: 351 bits (900), Expect = 9.320e-118
Identity = 172/300 (57.33%), Postives = 230/300 (76.67%), Query Frame = 1
Query:   46 AQAFPTRPVRIMVGFTPGGLPDITARLIGQKLSETWKQPVTVENRPGAGGNIAAQAVAAAPPDGYTLLSISSAHTSAPAIYPKLPFDVAKDFAGITMTATGPCLLIVAPDLPVKTVADLVALAKAKPGVLNYSSAGIGSGTHFAVETLKAQAGIDVVHVPFKGIPEALAEAVAGRVQFFMAPFATAIGLVKDGRARAIAVTSPKRVGETPNIPTVAESGVPGYKYAIWSGLLAPAKTPRALIEQLNAEVVRILRLPETAQRLAPLGTEAAPGTPDEFDRLIAEEVAGFTRLARAANIKVE 945
            AQ+FPT+P++I+VGF+PGG+PDI AR+IGQ++SE WKQPV VEN+ GAG NIAAQ VA AP DGYTLLSISSA   +PAIY  L FD  KDF+G+T+TATGP L++V+P++ V T+ +L+  A   PG + YSSAGIGSG+HFA E ++A+   +++H+P KGIP+A+ E ++GRV FF++P+A+AI LVK G+ RAIA+TS KR  + P +PTVAESGVPGYK+  W GL+APAKTP+A+++++  EV RIL LP    R   LGT A   TP++FD+ IA E+  F RLA+ + IK E
Sbjct:   25 AQSFPTQPIKIIVGFSPGGVPDIAARVIGQQMSENWKQPVVVENKLGAGSNIAAQFVANAPSDGYTLLSISSAFAISPAIYSTLAFDPIKDFSGVTLTATGPALVLVSPNIKVNTMKELIDYAAKNPGKVTYSSAGIGSGSHFAAELIQAKTNTELLHIPTKGIPDAITEVMSGRVDFFISPYASAINLVKAGKVRAIAITSTKRFKDLPTLPTVAESGVPGYKWEFWYGLMAPAKTPKAILQKIALEVKRILELPNIKDRFDELGTTAVSSTPEQFDKFIAAEIIDFARLAKQSGIKPE 324          
BLAST of mRNA_P-wetherbeei_contig21135.1.1 vs. uniprot
Match: A0A1W1Y6Y4_9BURK (Tripartite-type tricarboxylate transporter, receptor component TctC n=1 Tax=Polynucleobacter sp. VK13 TaxID=1938817 RepID=A0A1W1Y6Y4_9BURK)

HSP 1 Score: 346 bits (888), Expect = 6.380e-116
Identity = 171/300 (57.00%), Postives = 232/300 (77.33%), Query Frame = 1
Query:   46 AQAFPTRPVRIMVGFTPGGLPDITARLIGQKLSETWKQPVTVENRPGAGGNIAAQAVAAAPPDGYTLLSISSAHTSAPAIYPKLPFDVAKDFAGITMTATGPCLLIVAPDLPVKTVADLVALAKAKPGVLNYSSAGIGSGTHFAVETLKAQAGIDVVHVPFKGIPEALAEAVAGRVQFFMAPFATAIGLVKDGRARAIAVTSPKRVGETPNIPTVAESGVPGYKYAIWSGLLAPAKTPRALIEQLNAEVVRILRLPETAQRLAPLGTEAAPGTPDEFDRLIAEEVAGFTRLARAANIKVE 945
            AQA+P +P++I+VGF+PGG PDITAR++GQK SE W Q V VEN+ GAG NIA+Q VA + PDGYTLLS+S+A + +PAIYPKLPFD  KDF G+T+TATGP LLI++P L V TVA+L+ALAK  PG + YSSAG+GSG+HFA E L+A+AG+D++H+P KGIP+ L E ++GRV FF++P+A+AI +VKDG+A+AIA+TS KR  E  ++PT+AE+ VPGY++  W GLLAPA TP+ +++Q+ AEV RI  LP+  +R A +G E    TP +FD  +  E+  FT +A++A I  E
Sbjct:   27 AQAYPNKPIKIVVGFSPGGGPDITARVLGQKFSEKWNQSVVVENKVGAGANIASQFVANSKPDGYTLLSVSNAFSISPAIYPKLPFDAMKDFDGVTLTATGPALLIISPKLKVTTVAELIALAKKNPGQMTYSSAGVGSGSHFAAEILRAKAGLDLLHIPTKGIPDGLTEVISGRVDFFISPYASAIAMVKDGKAKAIAITSLKRNKEYLDLPTIAET-VPGYQWQFWYGLLAPAGTPKEILQQIAAEVKRINDLPDVKERYANIGIEPISDTPTQFDTFVQTEIKEFTAIAKSAKIMAE 325          
BLAST of mRNA_P-wetherbeei_contig21135.1.1 vs. uniprot
Match: UPI000D3E7F43 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Polynucleobacter rarus TaxID=556055 RepID=UPI000D3E7F43)

HSP 1 Score: 346 bits (887), Expect = 9.040e-116
Identity = 181/322 (56.21%), Postives = 241/322 (74.84%), Query Frame = 1
Query:    1 LLAATGLAALPRMGT-------AQAFPTRPVRIMVGFTPGGLPDITARLIGQKLSETWKQPVTVENRPGAGGNIAAQAVAAAPPDGYTLLSISSAHTSAPAIYPKLPFDVAKDFAGITMTATGPCLLIVAPDLPVKTVADLVALAKAKPGVLNYSSAGIGSGTHFAVETLKAQAGIDVVHVPFKGIPEALAEAVAGRVQFFMAPFATAIGLVKDGRARAIAVTSPKRVGETPNIPTVAESGVPGYKYAIWSGLLAPAKTPRALIEQLNAEVVRILRLPETAQRLAPLGTEAAPGTPDEFDRLIAEEVAGFTRLARAANIKVE 945
            +L  TG+ AL   GT       AQA+P +PV+I+VGF+PGG PDITAR++GQK SE W Q V +EN+ GAG NIA+Q VA + PDGYTLLS+S+A + +PAIYPKLPFD  KDF GIT+TATGP LLI++P L V +VA+LVA+AK  PG + YSSAGIGSG+HFA E L+++AG++++H+P KGIPE L E ++GRV FF++P+A+AI +VKDGRA+AIA+TS KR  E  ++PTVAE+ VPGY++  W GLLAPA TP+ +++Q+  EV RI  LPE  +R A +G E A  TP +FD  +  E+  F+ +A+AA I  E
Sbjct:    8 MLVVTGIIAL---GTVLQFDVRAQAYPNKPVKIVVGFSPGGGPDITARVLGQKFSEKWNQSVVIENKVGAGANIASQFVANSKPDGYTLLSVSNAFSISPAIYPKLPFDAMKDFDGITLTATGPALLIISPKLKVTSVAELVAMAKKNPGQMTYSSAGIGSGSHFAAEILRSKAGLELLHIPTKGIPEGLTEVMSGRVDFFISPYASAIAMVKDGRAKAIAITSLKRSKEMADMPTVAET-VPGYQWQFWYGLLAPAGTPKDILQQIALEVKRINELPELKERYASIGIEPASDTPAQFDIFVQNEIKDFSAIAKAAKIIAE 325          
BLAST of mRNA_P-wetherbeei_contig21135.1.1 vs. uniprot
Match: A0A3N5W8H2_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5W8H2_9PROT)

HSP 1 Score: 345 bits (884), Expect = 2.850e-115
Identity = 174/297 (58.59%), Postives = 223/297 (75.08%), Query Frame = 1
Query:   49 QAFPTRPVRIMVGFTPGGLPDITARLIGQKLSETWKQPVTVENRPGAGGNIAAQAVAAAPPDGYTLLSISSAHTSAPAIYPKLPFDVAKDFAGITMTATGPCLLIVAPDLPVKTVADLVALAKAKPGVLNYSSAGIGSGTHFAVETLKAQAGIDVVHVPFKGIPEALAEAVAGRVQFFMAPFATAIGLVKDGRARAIAVTSPKRVGETPNIPTVAESGVPGYKYAIWSGLLAPAKTPRALIEQLNAEVVRILRLPETAQRLAPLGTEAAPGTPDEFDRLIAEEVAGFTRLARAANIK 939
            + +PT+P+RI+VGFTPGG PDITAR I QKL+E ++Q V V+NRPGAGG IAA   A A PDGYTLLS+SSAH  APAIY KLP+D  +D AGI+++A    +L+ AP    + + DL+A A+ KPG LN+SSAG GSGTHFA E LK+ A IDVVH+PFKGIPEAL E++ GRVQFFM+P A A+GLV++G+   + V+S KR    PN+PT+AE+GVPGY   +W G+L  ++TPR LI  LN EV RIL   E  +R AP+G E +P TP +FD++IAE++A FTRLA+A NIK
Sbjct:   30 REYPTKPIRILVGFTPGGGPDITARYIAQKLTEEFQQTVVVDNRPGAGGTIAANLTATANPDGYTLLSVSSAHAVAPAIYDKLPYDAQRDLAGISLSAVSKYVLVAAPSTGYRNLNDLLAAARTKPGQLNFSSAGTGSGTHFAGELLKSMAKIDVVHIPFKGIPEALTESLTGRVQFFMSPIANAVGLVREGKLLGLGVSSLKRDALLPNVPTIAEAGVPGYDSILWFGMLTSSRTPRPLINVLNREVTRILGDAEVRKRWAPIGLEPSPTTPAQFDKIIAEDIATFTRLAKAGNIK 326          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21135.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C3NZ64_9PROT2.470e-13365.10Tripartite tricarboxylate transporter substrate bi... [more]
UPI00155F22AC8.130e-12458.33tripartite tricarboxylate transporter substrate bi... [more]
UPI001BFCE04A8.600e-12157.48tripartite tricarboxylate transporter substrate bi... [more]
UPI001C0C19AE1.140e-12057.61tripartite tricarboxylate transporter substrate bi... [more]
A0A2T7SUP8_9BURK1.940e-11857.33Uncharacterized protein n=2 Tax=Limnohabitans sp. ... [more]
A0A537CW66_9PROT6.960e-11859.18Tripartite tricarboxylate transporter substrate bi... [more]
UPI001C0C494B9.320e-11857.33tripartite tricarboxylate transporter substrate bi... [more]
A0A1W1Y6Y4_9BURK6.380e-11657.00Tripartite-type tricarboxylate transporter, recept... [more]
UPI000D3E7F439.040e-11656.21tripartite tricarboxylate transporter substrate bi... [more]
A0A3N5W8H2_9PROT2.850e-11558.59Tripartite tricarboxylate transporter substrate bi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig21135contigP-wetherbeei_contig21135:196..1143 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1157708.KB907468_gene107
PFAMsTctC
Model size948
Max annot lvl2|Bacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue5.37e-97
EggNOG OGsCOG3181@1|root,COG3181@2|Bacteria
DescriptionTripartite tricarboxylate transporter family receptor
Cds size948
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186217.4765103-CDS-P-wetherbeei_contig21135:195..11431683186217.4765103-CDS-P-wetherbeei_contig21135:195..1143Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig21135 196..1143 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig21135.1.1prot_P-wetherbeei_contig21135.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig21135 196..1143 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig21135.1.1

>prot_P-wetherbeei_contig21135.1.1 ID=prot_P-wetherbeei_contig21135.1.1|Name=mRNA_P-wetherbeei_contig21135.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=316bp
LLAATGLAALPRMGTAQAFPTRPVRIMVGFTPGGLPDITARLIGQKLSET
WKQPVTVENRPGAGGNIAAQAVAAAPPDGYTLLSISSAHTSAPAIYPKLP
FDVAKDFAGITMTATGPCLLIVAPDLPVKTVADLVALAKAKPGVLNYSSA
GIGSGTHFAVETLKAQAGIDVVHVPFKGIPEALAEAVAGRVQFFMAPFAT
AIGLVKDGRARAIAVTSPKRVGETPNIPTVAESGVPGYKYAIWSGLLAPA
KTPRALIEQLNAEVVRILRLPETAQRLAPLGTEAAPGTPDEFDRLIAEEV
AGFTRLARAANIKVE*
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mRNA from alignment at P-wetherbeei_contig21135:196..1143+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig21135.1.1 ID=mRNA_P-wetherbeei_contig21135.1.1|Name=mRNA_P-wetherbeei_contig21135.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=948bp|location=Sequence derived from alignment at P-wetherbeei_contig21135:196..1143+ (Phaeothamnion wetherbeei SAG_119_79)
CTGCTGGCCGCCACCGGTCTCGCCGCCCTGCCACGCATGGGCACGGCACA GGCGTTTCCCACGCGGCCGGTCCGCATCATGGTCGGTTTCACGCCGGGTG GGCTGCCCGACATCACCGCGCGCCTGATCGGCCAGAAGCTTTCGGAAACC TGGAAGCAGCCGGTCACGGTGGAAAACCGTCCTGGTGCCGGCGGCAACAT CGCCGCCCAGGCGGTGGCCGCAGCGCCGCCGGATGGCTATACGCTGCTGT CGATCTCCTCAGCCCATACCAGCGCGCCGGCGATCTACCCCAAGCTGCCG TTCGATGTGGCAAAGGATTTCGCGGGCATCACCATGACGGCCACCGGGCC GTGCCTGCTGATCGTGGCACCGGACCTGCCGGTCAAGACGGTAGCCGACC TGGTGGCACTGGCCAAGGCCAAGCCCGGCGTCCTCAACTATTCGTCCGCC GGCATCGGCAGCGGCACCCACTTCGCCGTCGAGACGCTCAAGGCCCAGGC AGGCATCGACGTCGTGCATGTGCCCTTCAAGGGCATTCCGGAGGCGCTCG CCGAGGCGGTGGCCGGACGCGTGCAGTTCTTCATGGCGCCGTTCGCCACC GCGATCGGCCTGGTGAAGGACGGTCGCGCAAGGGCAATTGCCGTCACCAG CCCGAAACGCGTCGGCGAAACTCCCAACATTCCAACGGTGGCCGAATCCG GTGTGCCGGGCTACAAGTACGCGATCTGGTCGGGCCTGCTGGCCCCGGCG AAGACGCCACGTGCGCTCATCGAGCAACTCAATGCGGAAGTGGTACGCAT CCTGCGGCTGCCGGAAACCGCACAGCGCCTGGCGCCGCTCGGCACCGAAG CGGCCCCCGGCACACCGGACGAGTTCGACCGGCTGATCGCCGAAGAGGTC GCGGGCTTCACCCGCCTGGCGCGTGCCGCCAACATCAAGGTCGAATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig21135:196..1143+

>mRNA_P-wetherbeei_contig21135.1.1 ID=mRNA_P-wetherbeei_contig21135.1.1|Name=mRNA_P-wetherbeei_contig21135.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=948bp|location=Sequence derived from alignment at P-wetherbeei_contig21135:196..1143+ (Phaeothamnion wetherbeei SAG_119_79)
CTGCTGGCCGCCACCGGTCTCGCCGCCCTGCCACGCATGGGCACGGCACA
GGCGTTTCCCACGCGGCCGGTCCGCATCATGGTCGGTTTCACGCCGGGTG
GGCTGCCCGACATCACCGCGCGCCTGATCGGCCAGAAGCTTTCGGAAACC
TGGAAGCAGCCGGTCACGGTGGAAAACCGTCCTGGTGCCGGCGGCAACAT
CGCCGCCCAGGCGGTGGCCGCAGCGCCGCCGGATGGCTATACGCTGCTGT
CGATCTCCTCAGCCCATACCAGCGCGCCGGCGATCTACCCCAAGCTGCCG
TTCGATGTGGCAAAGGATTTCGCGGGCATCACCATGACGGCCACCGGGCC
GTGCCTGCTGATCGTGGCACCGGACCTGCCGGTCAAGACGGTAGCCGACC
TGGTGGCACTGGCCAAGGCCAAGCCCGGCGTCCTCAACTATTCGTCCGCC
GGCATCGGCAGCGGCACCCACTTCGCCGTCGAGACGCTCAAGGCCCAGGC
AGGCATCGACGTCGTGCATGTGCCCTTCAAGGGCATTCCGGAGGCGCTCG
CCGAGGCGGTGGCCGGACGCGTGCAGTTCTTCATGGCGCCGTTCGCCACC
GCGATCGGCCTGGTGAAGGACGGTCGCGCAAGGGCAATTGCCGTCACCAG
CCCGAAACGCGTCGGCGAAACTCCCAACATTCCAACGGTGGCCGAATCCG
GTGTGCCGGGCTACAAGTACGCGATCTGGTCGGGCCTGCTGGCCCCGGCG
AAGACGCCACGTGCGCTCATCGAGCAACTCAATGCGGAAGTGGTACGCAT
CCTGCGGCTGCCGGAAACCGCACAGCGCCTGGCGCCGCTCGGCACCGAAG
CGGCCCCCGGCACACCGGACGAGTTCGACCGGCTGATCGCCGAAGAGGTC
GCGGGCTTCACCCGCCTGGCGCGTGCCGCCAACATCAAGGTCGAATGA
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