mRNA_P-wetherbeei_contig21131.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig21131.1.1
Unique NamemRNA_P-wetherbeei_contig21131.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig21131.1.1 vs. uniprot
Match: A0A6A7M659_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6A7M659_9PROT)

HSP 1 Score: 288 bits (737), Expect = 2.000e-93
Identity = 147/242 (60.74%), Postives = 184/242 (76.03%), Query Frame = 1
Query:    1 MPRLSEHELIGSLYDAALGHRSWDDVGPLLVRHIDGHTLMLSAHDPRTRAVDVVTTLGMSKQHLNEYGTFYAAHDVWALGALKLGVFDRAVPGTDAVEERALERSLIYNEFLHP-KLNMHHLAGSLLRLEGGMRAVLGIHRPRDAKDYSPKDIRRLDLLLPHIRRALEIRHRLQRADQRSRSVYSALDRLSIGVILMSATGRLRHVNAAGDAILCSNDGLMRTPEGLRAGRKEDDKHLQELI 723
            M   SE+ ++ SLYDAALGHRSW +VG  LV ++DG TLMLS H  +  AVDVV+TLGMS Q L  YG +YA HDVWALGA++  +F RA+ G+  VE+R LERSLIYNEF+ P +LNMHHL G++L L+ G   V+G+HRPR AKDY P ++RRL LLLPH++RALEIR RL++A+   +S  +A DRLS+GV+LM  TG+L HVNAA DAIL   DGLMR P+G+RA  K+DDK LQELI
Sbjct:    1 MSLASENGVVESLYDAALGHRSWGEVGRGLVSNLDGLTLMLSVHHQKHPAVDVVSTLGMSPQQLRMYGEYYARHDVWALGAVEQRLFGRALAGSQVVEDRVLERSLIYNEFIGPQRLNMHHLVGAILPLDDGHHVVVGVHRPRAAKDYDPGEVRRLGLLLPHLQRALEIRQRLRQAETIGQSATAAFDRLSLGVVLMGPTGKLLHVNAAADAILRGGDGLMRVPDGIRAMAKQDDKRLQELI 242          
BLAST of mRNA_P-wetherbeei_contig21131.1.1 vs. uniprot
Match: A0A5C8PSZ2_9HYPH (Helix-turn-helix transcriptional regulator n=1 Tax=Vineibacter terrae TaxID=2586908 RepID=A0A5C8PSZ2_9HYPH)

HSP 1 Score: 288 bits (737), Expect = 2.120e-93
Identity = 138/241 (57.26%), Postives = 181/241 (75.10%), Query Frame = 1
Query:    1 MPRLSEHELIGSLYDAALGHRSWDDVGPLLVRHIDGHTLMLSAHDPRTRAVDVVTTLGMSKQHLNEYGTFYAAHDVWALGALKLGVFDRAVPGTDAVEERALERSLIYNEFLHPKLNMHHLAGSLLRLEGGMRAVLGIHRPRDAKDYSPKDIRRLDLLLPHIRRALEIRHRLQRADQRSRSVYSALDRLSIGVILMSATGRLRHVNAAGDAILCSNDGLMRTPEGLRAGRKEDDKHLQELI 723
            MP + E +L+  LYDAALGHR+W + GP LVR +DGHTLMLS H+P  +AVD+V+TLGM+ + L +YG  YA HD+WALGA++  +F+R V G +AV+ R LERSLIYNE+L PKL+MH+L G+LL L+ G   VLGIHRPRDA DY+P D+RRL  +LPH+RRALE+R RL+R  Q  R+  + LDRL +GV+L++ TG L H NAA DA+L ++DGL      LRAG+ +DD+ LQ LI
Sbjct:    1 MPSVGERKLVADLYDAALGHRAWGEAGPQLVRFLDGHTLMLSVHNPLGQAVDLVSTLGMTAEDLRQYGEHYARHDLWALGAVEKRLFERPVTGAEAVDYRVLERSLIYNEYLRPKLDMHYLLGALLTLDSGHSVVLGIHRPRDAADYTPDDVRRLGRILPHLRRALEVRQRLKRETQAGRATLAVLDRLKLGVVLLAPTGALVHANAAADAVLRADDGLTHARGSLRAGKADDDRRLQALI 241          
BLAST of mRNA_P-wetherbeei_contig21131.1.1 vs. uniprot
Match: A0A5C5TDN7_9HYPH (HTH luxR-type domain-containing protein n=1 Tax=Reyranella sp. CPCC 100927 TaxID=2599616 RepID=A0A5C5TDN7_9HYPH)

HSP 1 Score: 266 bits (680), Expect = 8.910e-85
Identity = 130/237 (54.85%), Postives = 167/237 (70.46%), Query Frame = 1
Query:   13 SEHELIGSLYDAALGHRSWDDVGPLLVRHIDGHTLMLSAHDPRTRAVDVVTTLGMSKQHLNEYGTFYAAHDVWALGALKLGVFDRAVPGTDAVEERALERSLIYNEFLHPKLNMHHLAGSLLRLEGGMRAVLGIHRPRDAKDYSPKDIRRLDLLLPHIRRALEIRHRLQRADQRSRSVYSALDRLSIGVILMSATGRLRHVNAAGDAILCSNDGLMRTPEGLRAGRKEDDKHLQELI 723
            +E  LIG LYDAALGHR WDDVGP LVR + G TL+LS H P   AVD+VTTLGM+   L +Y  +YA HD+WA  A++ G+F + + G   V+    ERSL YNEFL PK+N+HH+AGSL+ L+ G  +V+GIHRPRD   Y P DI+ L  +LPH++RALE+R +LQ      RS+ +A D LS+GV+L+ ATG+L H NA+G AIL   DGLMR+  GLRA R +DDK LQ L+
Sbjct:    5 AEGALIGDLYDAALGHRPWDDVGPDLVRLVGGRTLLLSVHSPLGEAVDLVTTLGMAADDLQQYSAYYAQHDIWAQSAMRQGLFGQPLTGDQLVDSHTFERSLFYNEFLRPKVNIHHVAGSLMALDSGDFSVIGIHRPRDGAAYDPADIQALGRVLPHLQRALEVRQKLQHPAAPDRSLLAAFDWLSLGVVLLGATGKLIHANASGSAILAQGDGLMRSVAGLRAARGDDDKRLQALL 241          
BLAST of mRNA_P-wetherbeei_contig21131.1.1 vs. uniprot
Match: A0A512NS25_9HYPH (Helix-turn-helix transcriptional regulator n=1 Tax=Reyranella soli TaxID=1230389 RepID=A0A512NS25_9HYPH)

HSP 1 Score: 255 bits (651), Expect = 1.660e-80
Identity = 126/241 (52.28%), Postives = 172/241 (71.37%), Query Frame = 1
Query:    1 MPRLSEHELIGSLYDAALGHRSWDDVGPLLVRHIDGHTLMLSAHDPRTRAVDVVTTLGMSKQHLNEYGTFYAAHDVWALGALKLGVFDRAVPGTDAVEERALERSLIYNEFLHPKLNMHHLAGSLLRLEGGMRAVLGIHRPRDAKDYSPKDIRRLDLLLPHIRRALEIRHRLQRADQRSRSVYSALDRLSIGVILMSATGRLRHVNAAGDAILCSNDGLMRTPEGLRAGRKEDDKHLQELI 723
            M RL E+ LI SLYDAALGH +W+  G  +  ++   TLMLS HDP  +  DVV TLGM+ + + EYG F A HDVWALGAL   +F +A+ G + VE+ A +RS IYNE+L P ++  ++ GSL+RL+GG  A +G+HRP  A+ ++P+D  RL+ LLPH++RALE+R R+Q  + ++ +    LDRLS+GV L+SATGRL HVNAAG+ IL + DGL RTP+G+RA  ++DDK LQ LI
Sbjct:    1 MDRLKENGLIESLYDAALGHHAWEQAGHQIREYMGSKTLMLSTHDPLHKRADVVLTLGMTARQVQEYGHF-AQHDVWALGALDRRIFGKALVGEEVVEDDAFKRSYIYNEYLKPSIDARYMVGSLVRLQGGNHAAIGVHRPHGARSFTPEDAERLNRLLPHVQRALEVRQRVQGIEHKADATNFVLDRLSLGVFLISATGRLLHVNAAGEEILKNGDGLQRTPDGIRACNRDDDKRLQHLI 240          
BLAST of mRNA_P-wetherbeei_contig21131.1.1 vs. uniprot
Match: A0A259MD66_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillales bacterium 39-66-50 TaxID=1970570 RepID=A0A259MD66_9PROT)

HSP 1 Score: 196 bits (498), Expect = 1.550e-57
Identity = 104/236 (44.07%), Postives = 145/236 (61.44%), Query Frame = 1
Query:   16 EHELIGSLYDAALGHRSWDDVGPLLVRHIDGHTLMLSAHDPRTRAVDVVTTLGMSKQHLNEYGTFYAAHDVWALGALKLGVFDRAVPGTDAVEERALERSLIYNEFLHPKLNMHHLAGSLLRLEGGMRAVLGIHRPRDAKDYSPKDIRRLDLLLPHIRRALEIRHRLQRADQRSRSVYSALDRLSIGVILMSATGRLRHVNAAGDAILCSNDGLMRTPEGLRAGRKEDDKHLQELI 723
            + ELI   Y AA+G   WD VG  + R + G +L L+  DP    VD V  LG S+     Y   +A HD+WALGA+K  +  R++ G+  V  R LERS IYNEFL P +N+H+LAG++L L  G  AVLG+HRPRDA+D+ P+D+  LD +LPH++RALEIRH++Q  +  + + +S  + LS GVI +  TG +   N+ G+ +L   DGL+     L+A  K  D  LQ LI
Sbjct:    6 QSELIQDFYRAAIGQHPWDSVGRSIARSLGGLSLNLTLRDPGPGTVDQVANLGGSEAARKLYTDHFAEHDLWALGAVKKRLVGRSMTGSTVVANRILERSKIYNEFLLPTVNVHYLAGAILSLPNGRHAVLGVHRPRDARDFGPEDLHVLDSVLPHLQRALEIRHKVQAFEAMAHNGFSMFEMLSSGVIALGPTGLISFSNSIGERLLRRADGLVSAAGKLKALVKHQDSKLQHLI 241          
BLAST of mRNA_P-wetherbeei_contig21131.1.1 vs. uniprot
Match: A0A5C8PSR5_9HYPH (HTH luxR-type domain-containing protein n=1 Tax=Vineibacter terrae TaxID=2586908 RepID=A0A5C8PSR5_9HYPH)

HSP 1 Score: 167 bits (423), Expect = 3.230e-46
Identity = 92/241 (38.17%), Postives = 131/241 (54.36%), Query Frame = 1
Query:    1 MPRLSEHELIGSLYDAALGHRSWDDVGPLLVRHIDGHTLMLSAHDPRTRAVDVVTTLGMSKQHLNEYGTFYAAHDVWALGALKLGVFDRAVPGTDAVEERALERSLIYNEFLHPKLNMHHLAGSLLRLEGGMRAVLGIHRPRDAKDYSPKDIRRLDLLLPHIRRALEIRHRLQRADQRSRSVYSALDRLSIGVILMSATGRLRHVNAAGDAILCSNDGLMRTPEGLRAGRKEDDKHLQELI 723
            M   ++ ELI  LYDAALG   W DV  L+ +  D  TL L+ + P +   D V + G +      Y   + A D  A  A++  +F+RAV G+D V++  L RS IY+EFL P L   HL G  L L  G   V G HRP +A+ +   D+RRLD LLPH+RRALE+R  L  A+  +R +   LD L  G ++++A G + H NA  + ++   DGL +  + L A R +    L+  I
Sbjct:    1 MKPATDMELITRLYDAALGRVDWQDVADLITQSFDSVTLTLAIYRPTSSVPDFVASRGFTPAQRRAYQEHFFAQDPVAAEAMRRQIFNRAVLGSDLVDDDTLRRSAIYSEFLRPDLKAFHLLGGELPLPHGELVVFGTHRPEEARPFVHADVRRLDRLLPHLRRALEMRQTLHLAEAHARPLQGTLDLLPCGAVMVAADGLITHANAVAERLIAHGDGLGQRDQRLHAARADQHSQLRRAI 241          
BLAST of mRNA_P-wetherbeei_contig21131.1.1 vs. uniprot
Match: A0A1Q3LPJ4_9PROT (HTH luxR-type domain-containing protein n=1 Tax=Alphaproteobacteria bacterium 65-37 TaxID=1895711 RepID=A0A1Q3LPJ4_9PROT)

HSP 1 Score: 156 bits (394), Expect = 5.860e-42
Identity = 99/251 (39.44%), Postives = 131/251 (52.19%), Query Frame = 1
Query:    1 MPRLSEHELIGSLYDAALGHRSWDDVGPLLVRHIDGHTLMLSAHDPRTRAVDVVTTLGMSKQHLNEYGTFYAAHDVWALGALKLGVFDRAVPGTDAVEERALERSLIYNEFLHPKLNMHHLAGSLLRLEGGMRA----------VLGIHRPRDAKDYSPKDIRRLDLLLPHIRRALEIRHRLQRADQRSRSVYSALDRLSIGVILMSATGRLRHVNAAGDAILCSNDGLMRTPEGLRAGRKEDDKHLQELI 723
            M    E E +G LYDAALGH +W +VG  L    DG TL  +A       VD++T LG++ +    YG  Y   D W + AL+ GVFDRAV GTD V +   ++S IY E + P  ++ H   ++  L GG              LGIHRPR A  +       L  LLPHI RAL++R RL    Q +    +ALD LS GV+ +SA GRL   N A   ++ +NDGL+ T   + A    DD+ LQ  I
Sbjct:    1 METRQETEAVGLLYDAALGHVAWSEVGRCLRALFDGSTLTFTAQYASDGPVDMLTMLGITPKEAELYGAHYYQDDPWRVAALERGVFDRAVLGTDLVSDLDWQQSRIYCELVKPNTDVFHGVMAVGSLPGGGPLEGXXXXXGVYALGIHRPRRASPFDRSATEILQRLLPHIGRALQVRGRLDMGQQAATGAAAALDCLSFGVVQLSAAGRLVTANRAALDMMAANDGLLVTAGIVHALSPGDDERLQRAI 251          
BLAST of mRNA_P-wetherbeei_contig21131.1.1 vs. uniprot
Match: A0A1Q3KVT9_9PROT (HTH luxR-type domain-containing protein n=1 Tax=Alphaproteobacteria bacterium 65-37 TaxID=1895711 RepID=A0A1Q3KVT9_9PROT)

HSP 1 Score: 148 bits (374), Expect = 3.390e-39
Identity = 86/241 (35.68%), Postives = 130/241 (53.94%), Query Frame = 1
Query:    1 MPRLSEHELIGSLYDAALGHRSWDDVGPLLVRHIDGHTLMLSAHDPRTRAVDVVTTLGMSKQHLNEYGTFYAAHDVWALGALKLGVFDRAVPGTDAVEERALERSLIYNEFLHPKLNMHHLAGSLLRLEGGMRAVLGIHRPRDAKDYSPKDIRRLDLLLPHIRRALEIRHRLQRADQRSRSVYSALDRLSIGVILMSATGRLRHVNAAGDAILCSNDGLMRTPEGLRAGRKEDDKHLQELI 723
            M  L+E EL+G LYD ALG  +W  V   L + +D  ++     DP+  + ++  T  +  + +  Y T +  HD WA GA +LGV+++   G D V+    ERS  YN+FL  + + +HLAG+L+    G   ++G HRP+  + +S + + +LD LLPHI RA E+   L  A       +  LD++ +G I ++   RL H N A   IL S DGL      +RA  + DD+ LQ LI
Sbjct:    1 MTELTESELVGLLYDTALGRATWSKVVEALGQLLDCGSVYFG--DPQDVSSEIAATYRIPSRFVELYQTEFYKHDPWATGAARLGVYNKVKRGGDLVDRAVFERSAFYNDFLRHETDAYHLAGALVGRPHGRSLIVGCHRPKALEAFSDEALAQLDRLLPHISRAAEVHQSLLVA-------HDTLDQMPLGTIQLNREARLLHANEAAQHILRSEDGLELANNHIRATGRNDDQALQRLI 232          
BLAST of mRNA_P-wetherbeei_contig21131.1.1 vs. uniprot
Match: A0A512NS06_9HYPH (Transcriptional regulator n=2 Tax=Reyranella soli TaxID=1230389 RepID=A0A512NS06_9HYPH)

HSP 1 Score: 146 bits (369), Expect = 1.880e-38
Identity = 94/235 (40.00%), Postives = 122/235 (51.91%), Query Frame = 1
Query:   28 IGSLYDAALGHRSWDDVGPLLVRHIDGHTLMLSAHDPRTRAVDVVTTLGMSKQHLNEYGTFYAAHDVWALGALKLGVFDRAVPGTDAVEERALERSLIYNEFLHPKLNMHH---LAGSLLRLEGGMRAVLGIHRPRDAKDYSPKDIRRLDLLLPHIRRALEIRHRLQRADQRSRSVYSALDRLSIGVILMSATGRLRHVNAAGDAILCSNDGLMRTPEGLRAGRKEDDKHLQELI 723
            +G LYDAALGH  W  VG  L   +DG TL  +A    T  +D V   G+++  +  Y T Y A D+W   A+   + DR V  TD V +     S IY E   P  ++ H   + G+LL  E G+ + LGIHRP +A  ++     RL  LLPHI RAL++R RL  A    R+  + LDR + GVI + A G     NAA   IL  NDGL+    GLRA    DD  LQ  I
Sbjct:    1 MGLLYDAALGHADWAHVGARLASLVDGATLTFTAQYAPTAGIDFVDMKGVTQAEIELYATQYLADDLWRNAAIGRQIVDRVVLNTDLVSDLDWRNSRIYTELCRPNTDIFHGVMVTGTLL--EQGLFS-LGIHRPHNASPFNAAAASRLQRLLPHIGRALQVRSRLGLAGAEQRASMAVLDRFAFGVIQLGARGVFISANAAARRILDCNDGLVLGRLGLRAASAADDTRLQRAI 232          
BLAST of mRNA_P-wetherbeei_contig21131.1.1 vs. uniprot
Match: A0A840Y294_9PROT (DNA-binding CsgD family transcriptional regulator n=1 Tax=Roseomonas pecuniae TaxID=693023 RepID=A0A840Y294_9PROT)

HSP 1 Score: 112 bits (281), Expect = 1.150e-25
Identity = 84/248 (33.87%), Postives = 114/248 (45.97%), Query Frame = 1
Query:   19 HELIGSLYDAALGHRSWDDVGPLLVRHIDGHTLMLSAHDPRTRAVDVVTTLGMSKQHLNEYGTFYAAHDVWALGALKL------GVFDRAVPGTDAVEERALERSLIYNEFLHPKLNMHHLAGSLLRLEGGMRAVLGIHRPRDAKDYSPKDIRRLDLLLPHIRRALEIRHRLQRADQRSRSVYSALDRLSIGVILMSATGRLRHVNAA-------GDAILCSNDGLMRTPEGLRAGRKEDDKHLQELI 723
            H L G  YDAA+G   WD VG  L+  + G T      DPR   VD +       + L  Y  +Y A D+W  G L L      G    A+ GT+ V E  + RS IYN+F+     M  L G++  L       LGIHRP DA+ Y  ++   L L LPH+RRAL +RHRL+ A++      + LD L +   ++ A  RL   N A       G  +     G    P  + A R  D   L+ L+
Sbjct:    7 HVLAGLAYDAAMGECGWDAVGHALLALVGGRTATFWVGDPRRGEVDTLFA-SAPPEALQLYAEYYCARDIWTQGYLDLMRARGMGADTPAMIGTELVSESEVRRSEIYNDFMRG-FGMFDLVGNVSPLGDAGFLTLGIHRPEDAERYGVRERDLLGLALPHLRRALRLRHRLKAAEEAP----AVLDLLPMAGAVVDAGLRLVQANRAALALAAPGGPLRLERCGAPAGPPLVTAARVADRAVLERLV 248          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21131.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A7M659_9PROT2.000e-9360.74Uncharacterized protein n=1 Tax=Rhodospirillales b... [more]
A0A5C8PSZ2_9HYPH2.120e-9357.26Helix-turn-helix transcriptional regulator n=1 Tax... [more]
A0A5C5TDN7_9HYPH8.910e-8554.85HTH luxR-type domain-containing protein n=1 Tax=Re... [more]
A0A512NS25_9HYPH1.660e-8052.28Helix-turn-helix transcriptional regulator n=1 Tax... [more]
A0A259MD66_9PROT1.550e-5744.07Uncharacterized protein n=1 Tax=Rhodospirillales b... [more]
A0A5C8PSR5_9HYPH3.230e-4638.17HTH luxR-type domain-containing protein n=1 Tax=Vi... [more]
A0A1Q3LPJ4_9PROT5.860e-4239.44HTH luxR-type domain-containing protein n=1 Tax=Al... [more]
A0A1Q3KVT9_9PROT3.390e-3935.68HTH luxR-type domain-containing protein n=1 Tax=Al... [more]
A0A512NS06_9HYPH1.880e-3840.00Transcriptional regulator n=2 Tax=Reyranella soli ... [more]
A0A840Y294_9PROT1.150e-2533.87DNA-binding CsgD family transcriptional regulator ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig21131contigP-wetherbeei_contig21131:3..725 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1205680.CAKO01000026_gene4600
PFAMsGerE
Model size723
Max annot lvl204441|Rhodospirillales
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.31e-39
EggNOG OGsCOG2771@1|root,COG2771@2|Bacteria,1MWC0@1224|Proteobacteria,2UG16@28211|Alphaproteobacteria,2JTVH@204441|Rhodospirillales
Descriptionhelix_turn_helix, Lux Regulon
Cds size723
COG categoryK
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186217.3687918-CDS-P-wetherbeei_contig21131:2..7251683186217.3687918-CDS-P-wetherbeei_contig21131:2..725Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig21131 3..725 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig21131.1.1prot_P-wetherbeei_contig21131.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig21131 3..725 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig21131.1.1

>prot_P-wetherbeei_contig21131.1.1 ID=prot_P-wetherbeei_contig21131.1.1|Name=mRNA_P-wetherbeei_contig21131.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=241bp
MPRLSEHELIGSLYDAALGHRSWDDVGPLLVRHIDGHTLMLSAHDPRTRA
VDVVTTLGMSKQHLNEYGTFYAAHDVWALGALKLGVFDRAVPGTDAVEER
ALERSLIYNEFLHPKLNMHHLAGSLLRLEGGMRAVLGIHRPRDAKDYSPK
DIRRLDLLLPHIRRALEIRHRLQRADQRSRSVYSALDRLSIGVILMSATG
RLRHVNAAGDAILCSNDGLMRTPEGLRAGRKEDDKHLQELI
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mRNA from alignment at P-wetherbeei_contig21131:3..725-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig21131.1.1 ID=mRNA_P-wetherbeei_contig21131.1.1|Name=mRNA_P-wetherbeei_contig21131.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=723bp|location=Sequence derived from alignment at P-wetherbeei_contig21131:3..725- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCTAGGCTTTCGGAGCATGAGCTTATTGGCAGTCTCTACGATGCCGC TTTGGGGCATCGTTCTTGGGATGACGTAGGACCTCTTCTAGTTCGACACA TCGATGGTCACACGCTCATGCTATCGGCGCATGATCCCAGGACACGAGCA GTCGATGTCGTCACGACATTGGGCATGTCGAAGCAGCACTTGAATGAGTA TGGTACATTCTACGCTGCACACGATGTCTGGGCTTTGGGCGCACTCAAAT TGGGTGTCTTTGACCGAGCGGTCCCTGGTACTGATGCAGTTGAAGAACGC GCCCTAGAGCGCAGCTTAATCTACAATGAATTTCTGCACCCTAAACTCAA CATGCATCATCTGGCCGGTTCATTACTGCGCCTCGAAGGAGGAATGCGAG CCGTTCTAGGGATTCATCGTCCACGAGATGCGAAAGACTATTCCCCGAAG GACATCCGGCGATTAGATCTTCTCCTTCCTCACATCCGGCGCGCACTGGA GATTCGGCACCGCCTTCAAAGAGCGGACCAGAGAAGCCGCTCCGTCTACT CGGCGCTGGATCGATTGAGCATCGGCGTAATACTGATGAGTGCAACGGGT CGTCTTCGTCACGTAAACGCCGCCGGAGATGCAATCCTGTGCAGCAATGA CGGTCTAATGCGTACGCCCGAGGGGCTTCGCGCGGGGCGAAAGGAAGACG ATAAACACCTGCAAGAACTGATC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig21131:3..725-

>mRNA_P-wetherbeei_contig21131.1.1 ID=mRNA_P-wetherbeei_contig21131.1.1|Name=mRNA_P-wetherbeei_contig21131.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=723bp|location=Sequence derived from alignment at P-wetherbeei_contig21131:3..725- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCTAGGCTTTCGGAGCATGAGCTTATTGGCAGTCTCTACGATGCCGC
TTTGGGGCATCGTTCTTGGGATGACGTAGGACCTCTTCTAGTTCGACACA
TCGATGGTCACACGCTCATGCTATCGGCGCATGATCCCAGGACACGAGCA
GTCGATGTCGTCACGACATTGGGCATGTCGAAGCAGCACTTGAATGAGTA
TGGTACATTCTACGCTGCACACGATGTCTGGGCTTTGGGCGCACTCAAAT
TGGGTGTCTTTGACCGAGCGGTCCCTGGTACTGATGCAGTTGAAGAACGC
GCCCTAGAGCGCAGCTTAATCTACAATGAATTTCTGCACCCTAAACTCAA
CATGCATCATCTGGCCGGTTCATTACTGCGCCTCGAAGGAGGAATGCGAG
CCGTTCTAGGGATTCATCGTCCACGAGATGCGAAAGACTATTCCCCGAAG
GACATCCGGCGATTAGATCTTCTCCTTCCTCACATCCGGCGCGCACTGGA
GATTCGGCACCGCCTTCAAAGAGCGGACCAGAGAAGCCGCTCCGTCTACT
CGGCGCTGGATCGATTGAGCATCGGCGTAATACTGATGAGTGCAACGGGT
CGTCTTCGTCACGTAAACGCCGCCGGAGATGCAATCCTGTGCAGCAATGA
CGGTCTAATGCGTACGCCCGAGGGGCTTCGCGCGGGGCGAAAGGAAGACG
ATAAACACCTGCAAGAACTGATC
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