mRNA_P-wetherbeei_contig21122.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig21122.1.1 vs. uniprot
Match: UPI001FE52F39 (MFS transporter n=1 Tax=Miltoncostaea marina TaxID=2843215 RepID=UPI001FE52F39) HSP 1 Score: 370 bits (951), Expect = 1.310e-124 Identity = 211/271 (77.86%), Postives = 235/271 (86.72%), Query Frame = 1
Query: 25 PDVLRVPAFRRVWLASVISNGGNWLQIVASGWLILKATGSPAAVGALALVTRAPAIALSAYAGRLADRHDRRWVGICTFLLQAVAAGALAVVTLVAGVNVIAIYALTFMVGVGFALGLPAMLALIPSLVPRSRLSQAVSLNAAGINVARLLGPAIGGLTLALFGATVCFAVNALSFLALVGVLMALPARPAGAD--RGGVRMREALGYAARDPAMRRLLLGIALFTALASPMQELAPVVADRLDVGAGGLGFLLGAMGGGALLGAWLLERL 831
P+VLRVPAFR VW+AS++SNGG+WLQIVASGWLIL+ATGSPAAVGALALVTRAPAI LSA+AG LADR DRR VGI TF LQA AAG+LA++T G +V AIYALTF+VGVGFALGLPAMLALIPSLVPR+RLSQAVSLNAAGIN+ARL GPAIGG LALFGATVCFAVNA+SFLALV L L RP A G R+R+ALG+A+ DPA+RRLL+G+A+FT LASP+QELAPVVADRLD GA GLG LLGAMGGGAL GAWLLERL
Sbjct: 4 PEVLRVPAFRAVWVASLLSNGGSWLQIVASGWLILEATGSPAAVGALALVTRAPAIGLSAWAGSLADRVDRRAVGIWTFALQAAAAGSLALITWADGTHVAAIYALTFVVGVGFALGLPAMLALIPSLVPRARLSQAVSLNAAGINIARLAGPAIGGGMLALFGATVCFAVNAVSFLALVWALARLEPRPPAAPPAAGRPRLRDALGFASADPAIRRLLIGMAIFTVLASPVQELAPVVADRLDAGATGLGLLLGAMGGGALGGAWLLERL 274
BLAST of mRNA_P-wetherbeei_contig21122.1.1 vs. uniprot
Match: UPI001C3D2A7C (MFS transporter n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001C3D2A7C) HSP 1 Score: 350 bits (898), Expect = 1.400e-116 Identity = 202/274 (73.72%), Postives = 227/274 (82.85%), Query Frame = 1
Query: 13 MRLTPDVLRVPAFRRVWLASVISNGGNWLQIVASGWLILKATGSPAAVGALALVTRAPAIALSAYAGRLADRHDRRWVGICTFLLQAVAAGALAVVTLVAGVNVIAIYALTFMVGVGFALGLPAMLALIPSLVPRSRLSQAVSLNAAGINVARLLGPAIGGLTLALFGATVCFAVNALSFLALVGVLMALPARPAGADRGG-VRMREALGYAARDPAMRRLLLGIALFTALASPMQELAPVVADRLDVGAGGLGFLLGAMGGGALLGAWLLERL 831
M P++LR+ FR VWLAS+ SN G+WLQIVASGWLIL+AT SPAAVGALALVTRAPAIA SAYAG LADR DRR VG TF +QAVAAG LAV+TL G +V AIY LTF+VG+GFALGLPAMLALIP+LVP +LSQAVSLNAAGINVARL GPAIGG LA+FGAT CFA+NA+SFLALV VL+ L RPA G VRM +AL +A D A+RRLL+G+A+FT LASP+QELAPVVADRLD GA GLG LLGAMGGGAL+GAWLLERL
Sbjct: 1 MSAVPEILRIRDFRAVWLASLASNAGSWLQIVASGWLILQATDSPAAVGALALVTRAPAIAFSAYAGGLADRFDRRIVGAWTFGMQAVAAGVLAVITLTDGTHVAAIYVLTFVVGLGFALGLPAMLALIPALVPPPKLSQAVSLNAAGINVARLAGPAIGGGVLAVFGATACFALNAVSFLALVWVLLRLHPRPAVVHAGAPVRMSDALRHAVHDRAIRRLLVGMAIFTTLASPIQELAPVVADRLDAGATGLGLLLGAMGGGALVGAWLLERL 274
BLAST of mRNA_P-wetherbeei_contig21122.1.1 vs. uniprot
Match: A0A534W622_9DELT (MFS transporter n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534W622_9DELT) HSP 1 Score: 178 bits (451), Expect = 3.940e-49 Identity = 127/279 (45.52%), Postives = 162/279 (58.06%), Query Frame = 1
Query: 31 VLRVPAFRRVWLASVISNGGNWLQIVASGWLILKATGSPAAVGALALVTRAPAIALSAYAGRLADRHDRRWVGICTFLLQAVAAGALAVVTLVAGVNVIAIYALTFMVGVGFALGLPAMLALIPSLVPRSRLSQAVSLNAAGINVARLLGPAIGGLTLALFGATVCFAVNALSFLALVGVL--MALPARP-------AGA--DRGGVRMREALGYAARDPAMRRLLLGIALFTALASPMQELAPVVADRL-DVGAGGLGFLLGAMGGGALLGAWLLERL 831
VLR PAFR +WL S+ SN GNW++ VA WL+ K T SP V L+ P L+ AG LADRHDRR + + + A LAV+T + I L F+ G +A +PA AL+P+LVPR L A++LN+A N ARLLGP I G L GA F +N LSFL +V VL + +PA+P AG +GGVR EA+ +A R P RR+LLG+ +F LA+P+Q L PV AD L VGA G G LL +G GA+ GA L RL
Sbjct: 24 VLRHPAFRWIWLGSLASNVGNWMETVAQAWLVQKQTQSPFLVELLSAAEFIPVALLALPAGALADRHDRRKLLLIGQTAMMIMAAVLAVLTHLDYATPAVIITLAFLEGASWAAVMPAWQALVPALVPREELPSAIALNSAQFNGARLLGPMIAGALLTAAGAAAVFDINVLSFLGIVMVLGLVRVPAQPLRDAPTRAGVLKKQGGVR--EAVSWALRQPGPRRILLGLFMFALLAAPVQGLLPVYADELLHVGAHGYGALLSCLGAGAIAGALTLARL 300
BLAST of mRNA_P-wetherbeei_contig21122.1.1 vs. uniprot
Match: A0A7J9YWL1_9ACTN (MFS transporter n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A7J9YWL1_9ACTN) HSP 1 Score: 165 bits (418), Expect = 9.410e-45 Identity = 114/276 (41.30%), Postives = 156/276 (56.52%), Query Frame = 1
Query: 7 ARMRLTPDVLRVPAFRRVWLASVISNGGNWLQIVASGWLILKATGSPAAVGALALVTRAPAIALSAYAGRLADRHDRRWVGICTFLLQAVAAGALAVVTLVAGVNVIAIYALTFMVGVGFALGLPAMLALIPSLVPRSRLSQAVSLNAAGINVARLLGPAIGGLTLALFGATVCFAVNALSFLALVGVLMAL-PARPAGADRGGVRMREALGYAARDPAMRRLLLGIALFTALASPMQELAPVVADRLDVGAGGLGFLLGAMGGGALLGAWLLERL 831
AR L P FRR L+ S G+W+QIVA+GWL + T S AVGAL ++R PAIALS+Y G LADR DRR +GI QA+AA ALA++T V++ A+Y+LT +G+ AL A+ + VP +A++L + + AR LGPA+GG +A+ G CF NALSF+ +V L + P+ A +RE + A + L+ LF L +P+QELAP +A R GA LGFLL A+ G +LG +L RL
Sbjct: 5 ARTENARGPLHYPQFRRALLSRAASTAGDWMQIVAAGWLTYQLTDSAVAVGALTALSRGPAIALSSYGGVLADRFDRRRLGIACCAAQALAAAALAILTWDGEVDLAALYSLTLAIGLANALSNSAIQIAATTTVPPELSKRAIALTSVTSSTARALGPALGGGLVAVLGPGPCFTANALSFVVVVVALATIAPSHEKPAPGSPQGLRETISAARAHQVLAVALVAAGLFATLVAPLQELAPAIARRNGDGAHVLGFLLAALAVGGILGNLVLSRL 280
BLAST of mRNA_P-wetherbeei_contig21122.1.1 vs. uniprot
Match: A0A534YAB0_9DELT (MFS transporter n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534YAB0_9DELT) HSP 1 Score: 170 bits (430), Expect = 2.580e-44 Identity = 123/277 (44.40%), Postives = 162/277 (58.48%), Query Frame = 1
Query: 31 VLRVPAFRRVWLASVISNGGNWLQIVASGWLILKATGSPAAVGALALVTRAPAIALSAYAGRLADRHDRRWVGICTFLLQAVAAGALAVVTLVAGVNVIAIYALTFMVGVGFALGLPAMLALIPSLVPRSRLSQAVSLNAAGINVARLLGPAIGGLTLALFGATVCFAVNALSFLALVGVLMAL--PARPAGA--DRGGV-----RMREALGYAARDPAMRRLLLGIALFTALASPMQELAPVVADRL-DVGAGGLGFLLGAMGGGALLGAWLLERL 831
VLR PAFR +W AS++SN GNW++ V+ WL+ + T SP V LA P L+ AG LADR+DRR + + + V A LAV+T + I L F+ G +A +PA AL+P+LVPR L A++LN+A N ARLLGP I G L+ GA + F VN SF ++ VL + P RP+ A R GV +REAL +A +P RRLLL + +F LA+P+Q L PV AD+L VGA G G LL +G GA+ GA L RL
Sbjct: 389 VLRRPAFRYLWAASLLSNVGNWMEAVSQSWLVQQQTASPFLVELLAAAEFIPVAILALPAGALADRYDRRKLLLAGQTMMMVFAAVLAVLTHLGRATPGNISLLAFLEGAAWASVMPAWQALVPALVPREELPSAIALNSAQFNGARLLGPMIAGGLLSAAGAALVFDVNVASFFGILFVLSLVHFPGRPSRAVPSRPGVLQRQTAIREALSFAWHEPGPRRLLLSLFMFALLAAPVQGLLPVYADQLLHVGAHGYGALLSCLGAGAITGALTLARL 665
BLAST of mRNA_P-wetherbeei_contig21122.1.1 vs. uniprot
Match: A0A2W5N1B5_9GAMM (MFS transporter n=1 Tax=Rhodanobacter denitrificans TaxID=666685 RepID=A0A2W5N1B5_9GAMM) HSP 1 Score: 164 bits (416), Expect = 1.930e-43 Identity = 115/268 (42.91%), Postives = 154/268 (57.46%), Query Frame = 1
Query: 43 PAFRRVWLASVISNGGNWLQIVASGWLILKATGSPAAVGALALVTRAPAIALSAYAGRLADRHDRRWVGICTFLLQAVAAGALAVVTLVAGVNVIAIYALTFMVGVGFALGLPAMLALIPSLVPRSRLSQAVSLNAAGINVARLLGPAIGGLTLALFGATVCFAVNALSFLALVGVLMALPARPAG----ADRGGVRMREALGYAARDPAMRRLLLGIALFTALASPMQELAPVVADR-LDVGAGGLGFLLGAMGGGALLGAWLLERL 831
P FR +WLA + N G W+ VA+ W++ TGSP V A+ T P + L+ AG LAD DRR I L A A LAV+ V + ALTF +GVG A+ +PA A P LVPR+ L+ AV+LN+ G+N+AR +GPA+GGL +A GA+ FA+NA+SF+A++ VL PA A+ G +R L YA + A+R +L+ A F AS + L PV+ R L G G G LLG +G GA+ GA LL RL
Sbjct: 23 PTFRALWLAILAGNIGTWMHDVAAAWVMTDLTGSPLMVAAVQAATTLPVVVLALAAGALADIVDRRRYLIVAQLWMASIAALLAVLAQAGQVGPWTLLALTFALGVGAAMAMPAQAATTPELVPRALLAPAVALNSVGMNIARSIGPALGGLVVARLGASWAFALNAVSFVAVLVVLWRWRRAPAPSSLPAETFGGALRAGLRYAGQATALRAVLVKAASFFVFASALTALMPVIVRRDLHAGPGTFGLLLGCVGVGAIAGAMLLPRL 290
BLAST of mRNA_P-wetherbeei_contig21122.1.1 vs. uniprot
Match: A0A7V5C2M7_9ACTN (MFS transporter n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V5C2M7_9ACTN) HSP 1 Score: 164 bits (416), Expect = 2.010e-43 Identity = 111/268 (41.42%), Postives = 155/268 (57.84%), Query Frame = 1
Query: 34 LRVPAFRRVWLASVISNGGNWLQIVASGWLILKATGSPAAVGALALVTRAPAIALSAYAGRLADRHDRRWVGICTFLLQAVAAGALAVVTLVAGVNVIAIYALTFMVGVGFALGLPAMLALIPSLVPRSRLSQAVSLNAAGINVARLLGPAIGGLTLALFGATVCFAVNALSFLALVGVLMALPARPAGADRGGVRMREALG----YAARDPAMRRLLLGIALFTALASPMQELAPVVADRLDVGAGGLGFLLGAMGGGALLGAWLLE 825
L++P FR +W+AS+ SN G++LQ VA+ WL+L+ TGS A VG + + P + L+ AG +AD DRR + + + AAGA+A +T+ + + L ++GVG A LPA A +P LVPR ++ AV+LN+ NVAR +GPAIGG +A G FA+NA S+L +V VL L R + DR M A+ +A PA RRLL A F ++ +Q + P L GA GFLLGAMG GAL+GA+ E
Sbjct: 8 LKIPGFRALWVASIFSNIGSFLQAVAASWLMLELTGSAAWVGLMNAASTLPLLFLALVAGAVADLVDRRRLLLAAQVTMGSAAGAMAALTITGRITPTLLVGLGLLLGVGLAFNLPAWQATVPDLVPRGMIASAVALNSVAFNVARAVGPAIGGALIATAGPGAGFALNAASYLGVVAVLAVLARRMSVPDRAETSMVNAIANGVRFARYTPAFRRLLGLAAAFALTSASVQAVLPNRTTELGGGAAAYGFLLGAMGVGALVGAFTRE 275
BLAST of mRNA_P-wetherbeei_contig21122.1.1 vs. uniprot
Match: A0A2W2F5B6_9ACTN (MFS transporter n=2 Tax=Nonomuraea TaxID=83681 RepID=A0A2W2F5B6_9ACTN) HSP 1 Score: 162 bits (410), Expect = 1.030e-42 Identity = 111/269 (41.26%), Postives = 151/269 (56.13%), Query Frame = 1
Query: 34 LRVPAFRRVWLASVISNGGNWLQIVASGWLILKATGSPAAVGALALVTRAPAIALSAYAGRLADRHDRRWVGICTFLLQAVAAGALAVVTLVAGVNVIAIYALTFMVGVGFALGLPAMLALIPSLVPRSRLSQAVSLNAAGINVARLLGPAIGGLTLALFGATVCFAVNALSFLALVGVLMALPAR----PAGADRGGVRMREALGYAARDPAMRRLLLGIALFTALASPMQELAPVVADR-LDVGAGGLGFLLGAMGGGALLGAWLLE 825
L + FR +WLA ++SN +W+Q V + WLI + +GS + V + P + G LAD DRR + + + VAAG LAV+T + +N + LTF++G G AL PA A+ P LVPR ++ A SLN +N++R +GPA+GGL +AL G FAVNALSFL L+A R P GA+R +R Y P +RR+L LF + + L PVVADR L +G GG G LLGA+G GA+ GA LL
Sbjct: 13 LHLRVFRTLWLAQLVSNVSSWMQTVGAQWLITQESGSASLVALVQTAASLPVLLFGILTGALADIVDRRRLLLLAQAVMFVAAGLLAVLTALGRMNASGVLLLTFLLGCGNALMTPAWQAIQPDLVPREQIPNAASLNGVNMNLSRAVGPAVGGLVVALAGPAAAFAVNALSFLVTSAALVAWRYRADVGPLGAERVLPALRAGNRYVRHAPRVRRVLARTLLFVPAGAALWALLPVVADRRLGLGPGGYGLLLGAVGAGAVAGAMLLS 281
BLAST of mRNA_P-wetherbeei_contig21122.1.1 vs. uniprot
Match: A0A5D4XID7_9GAMM (MFS transporter n=1 Tax=Luteimonas sp. XBU10 TaxID=1132694 RepID=A0A5D4XID7_9GAMM) HSP 1 Score: 161 bits (408), Expect = 2.820e-42 Identity = 111/271 (40.96%), Postives = 156/271 (57.56%), Query Frame = 1
Query: 34 LRVPAFRRVWLASVISNGGNWLQIVASGWLILKATGSPAAVGALALVTRAPAIALSAYAGRLADRHDRRWVGICTFLLQAVAAGALAVVTLVAGVNVIAIYALTFMVGVGFALGLPAMLALIPSLVPRSRLSQAVSLNAAGINVARLLGPAIGGLTLALFGATVCFAVNALSFLALVGVLMALPARPAGA----DRGGVRMREALGYAARDPAMRRLLLGIALFTALASPMQELAPVVADR-LDVGAGGLGFLLGAMGGGALLGAWLLERL 831
L P FR +WLA +I N G W+ VA+ W++ + TGSP V A+ T P + L+ AG LAD DRR I L + AG LA++ + + + ALTF +GVG A+ +PA A +P LVPR+ L AV+L++ +N+AR +GPA+GGL +A G FA+NALSFL +V VL+ PA + GV +R L YA + ++ +L+ A F AS + L P+V +R L AG G LLG +G GA+ GA LL +L
Sbjct: 19 LTQPTFRMMWLAVLIGNIGTWIHDVAAAWVMAENTGSPLMVAAVQSATTLPVVLLAVLAGTLADIVDRRKYLILAQLWMLLVAGTLALLAHLDMLGPWTLIALTFALGVGAAMAMPAQQATVPELVPRTMLGPAVALSSLSMNIARAIGPALGGLIVASAGIESAFAINALSFLCIVAVLVIWRRTPAKTALPPESFGVALRAGLRYATQASVLQSVLVKAASFFMFASALTALLPIVVNRELQASAGSYGLLLGCIGIGAICGAVLLPKL 289
BLAST of mRNA_P-wetherbeei_contig21122.1.1 vs. uniprot
Match: A0A5C6CIT7_9BACT (Enterobactin exporter EntS n=1 Tax=Novipirellula galeiformis TaxID=2528004 RepID=A0A5C6CIT7_9BACT) HSP 1 Score: 158 bits (400), Expect = 3.930e-42 Identity = 103/269 (38.29%), Postives = 155/269 (57.62%), Query Frame = 1
Query: 34 LRVPAFRRVWLASVISNGGNWLQIVASGWLILKATGSPAAVGALALVTRAPAIALSAYAGRLADRHDRRWVGICTFLLQAVAAGALAVVTLVAGVNVIAIYALTFMVGVGFALGLPAMLALIPSLVPRSRLSQAVSLNAAGINVARLLGPAIGGLTLALFGATVCFAVNALSFLALVGVLMALPARPAGADRG---GVRMREALGYAARDPAMRRLLLGIALFTALASPMQELAPVVA-DRLDVGAGGLGFLLGAMGGGALLGAWLLER 828
L++P +R W AS+ +N G W+ V +GWL+ SP V A+ V AP I L+ G L DR DRR + I T + LA++T + + TF++G+G + +P A IP LVP+++L++A++L + N+AR +GPA+GG+ +AL G FA+NA+SF ++ VL++ + RG + M + L Y A++ AMR +LG+ LF AS + L P+VA + L GA G GFL+G MG GA+L AWLL
Sbjct: 22 LQIPLYRTFWFASLAANLGTWIHEVGAGWLMASLDPSPQMVAAVRTVMAAPIIFLAIPVGVLGDRIDRRRMLILTQFVLCACTATLALLTFSGIITANLLLVFTFIIGLGMVVHVPIWQASIPELVPKNQLARAIALGSISFNLARAVGPAVGGVLIALAGVWTSFALNAMSFAGVMFVLLSWKRARRESSRGLSFRLSMYQGLRYVAKNLAMRHTMLGVVLFVWPASALWSLLPLVAKEHLRWGASGFGFLVGCMGAGAVLAAWLLPH 290 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21122.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig21122.1.1 >prot_P-wetherbeei_contig21122.1.1 ID=prot_P-wetherbeei_contig21122.1.1|Name=mRNA_P-wetherbeei_contig21122.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=276bp MRLTPDVLRVPAFRRVWLASVISNGGNWLQIVASGWLILKATGSPAAVGAback to top mRNA from alignment at P-wetherbeei_contig21122:338..1177+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig21122.1.1 ID=mRNA_P-wetherbeei_contig21122.1.1|Name=mRNA_P-wetherbeei_contig21122.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=840bp|location=Sequence derived from alignment at P-wetherbeei_contig21122:338..1177+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig21122:338..1177+ >mRNA_P-wetherbeei_contig21122.1.1 ID=mRNA_P-wetherbeei_contig21122.1.1|Name=mRNA_P-wetherbeei_contig21122.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=828bp|location=Sequence derived from alignment at P-wetherbeei_contig21122:338..1177+ (Phaeothamnion wetherbeei SAG_119_79)back to top |