mRNA_P-wetherbeei_contig21115.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig21115.1.1 vs. uniprot
Match: K0SVL0_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SVL0_THAOC) HSP 1 Score: 89.0 bits (219), Expect = 1.640e-17 Identity = 57/171 (33.33%), Postives = 82/171 (47.95%), Query Frame = 1
Query: 1 SKQLFLDFGQRSFGKPVHCHRCGLLFVKGIEQEEAEHSKFCRRAIATTGSGIPFTGWKTERIVWRLPPNSATAGTSAXXXXXXXXXXXXXXPPSGPTPSADERIVEVRADDPPSHKAKLQDVIAAADADMGFARAAPAEEERRWRRRRAFLYVRDKHVMGCVVAEPVETAF 513
S QLFLDFGQ+SFGK C CG+LF++ E++ +H C+ G+ GWK ER V +T GT DERI+E+R D PSH K++ V A D MGFA++ +EE +LY+ + V+G +V + + A+
Sbjct: 263 SNQLFLDFGQKSFGKQSVCRECGMLFMESSEEDVKQHDVICK----DYKEGVVCLGWKNERSV-------STLGT-------------------------DERILEIRPGDAPSHWRKVEQVKAIVDKSMGFAQSGRKKEEDD-AGMTCYLYIAKRRVVGLLVVKRIHRAY 396
BLAST of mRNA_P-wetherbeei_contig21115.1.1 vs. uniprot
Match: A0A836CNA6_9STRA (ESCO1/2 acetyl-transferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNA6_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 2.390e-17 Identity = 73/167 (43.71%), Postives = 93/167 (55.69%), Query Frame = 1
Query: 7 QLFLDFGQRSFGKPVHCHRCGLLFVKGIEQEEAEHSKFCRRAIATTGSGIPFTGWKTERIVWRLPPNSAT--AGTSAXXXXXXXXXXXXXXPPSGPTPSADERIVEVRADDPPSHKAKLQDVIAAADADMGFARAAPAEEERRWRRRRAFLYVRDKHVMGCVVAEPV 501
Q+ LD GQR FG+ C RCG+L++ + H++ C A +G+ F GWK ER+ AT G XXXXXXXXXXXXXX S R+VE+R+ DP +H AKL +V A D DMGFA A P + RR AFLY+ V GCV+ EP+
Sbjct: 64 QMCLDLGQRDFGRRSQCARCGMLWLPSDPGDAEAHARHC----AAHAAGVAFAGWKHERV-------QATFHGGXXXXXXXXXXXXXXXXXXXSA---GKGARVVEIRSGDPAAHVAKLSEVKALMDEDMGFAHA-PMKAGRR-----AFLYITANKVAGCVIVEPI 210
BLAST of mRNA_P-wetherbeei_contig21115.1.1 vs. uniprot
Match: B8BTC6_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTC6_THAPS) HSP 1 Score: 82.4 bits (202), Expect = 3.490e-15 Identity = 57/175 (32.57%), Postives = 88/175 (50.29%), Query Frame = 1
Query: 4 KQLFLDFGQRSFGKPVHCHRCGLLFVKGIEQEEAEHSKFCRRAIATTGSGIPFTG-WKTERIVWRLPPNSATAGTSAXXXXXXXXXXXXXXPPSGPTPSADERIVEVRADDPPSHKAKLQDVIAAADADMGFA----RAAPAEEERRWRRRRAFLYVRDKHVMGCVVAEPVETAF 513
+QL+LDFGQ +FGK C CG+L V G+++++ +H K CR G+ F G WK ER V R S++ G SG + + RIVEVR +D K K+ +V D +MGFA R+ + E + ++LY+ K V+G ++ + V+ A+
Sbjct: 343 QQLYLDFGQSTFGKQSICSLCGMLRVHGLQEDDDQHDKVCR----DYKEGVVFGGGWKNERCVGRFGVCSSSGGGG-----------------SGKSGGEEGRIVEVRPEDGVVMKQKVLEVKEIVDKEMGFAVASKRSGFEDGEDQLEGITSYLYIAKKRVVGLLLVKHVKRAY 496
BLAST of mRNA_P-wetherbeei_contig21115.1.1 vs. uniprot
Match: A0A7S1G1E2_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G1E2_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 1.140e-9 Identity = 28/64 (43.75%), Postives = 42/64 (65.62%), Query Frame = 1
Query: 7 QLFLDFGQRSFGKPVHCHRCGLLFVKGIEQEEAEHSKFCRRAIATTGSGIPFTGWKT--ERIVW 192
Q++LDFGQ+SFGK C +CG+L++ G+E++EA H K C+ + G+PF K +R VW
Sbjct: 85 QMYLDFGQKSFGKNTTCEKCGMLYMNGMEEDEATHRKVCQSYL----HGVPFRSKKMMRDRTVW 144
BLAST of mRNA_P-wetherbeei_contig21115.1.1 vs. uniprot
Match: A0A7S1Z443_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z443_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 1.440e-9 Identity = 29/62 (46.77%), Postives = 39/62 (62.90%), Query Frame = 1
Query: 7 QLFLDFGQRSFGKPVHCHRCGLLFVKGIEQEEAEHSKFCRRAIATTGSGIPFTG-WKTERIV 189
QL+LDFGQ SFG+ C C +L+V G+E++ H K C + G+PF G WKTER+V
Sbjct: 195 QLYLDFGQSSFGQQTICPMCNMLYVHGVEEDVLNHRKICE----SYNLGVPFAGGWKTERLV 252
BLAST of mRNA_P-wetherbeei_contig21115.1.1 vs. uniprot
Match: A0A2H9ZSQ6_9ASPA (N-acetyltransferase n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2H9ZSQ6_9ASPA) HSP 1 Score: 65.9 bits (159), Expect = 1.500e-9 Identity = 48/171 (28.07%), Postives = 76/171 (44.44%), Query Frame = 1
Query: 4 KQLFLDFGQRSFGKPVH-CHRCGLLFVKGIEQEEAEHSKFCRRAIATTGSGIPFTGWKTERIVWRLPPNSATAGTSAXXXXXXXXXXXXXXPPSGPTPSADERIVEVRADDPPSHKAKLQDVIAAADADMGFARAAPAEEERRWRRRRAFLYVRDKHVMGCVVAEPVETAF 513
+Q +LD GQ F +H C CGL++ +G+E++E H KF + GI W+ ER+V L PN + RIV V DPP+ + K+Q V ++GF E + +L++ ++GC+VAEP++TA+
Sbjct: 71 EQYYLDLGQSDF--VLHTCSVCGLMYARGVEEDEQVHRKFHQEF----NKGIQIKSWQNERVV--LTPNINAS-----------------------------RIVLVLRSDPPTQQHKVQKVANLMVKELGFNAEHLIHEHCK-----VYLFICGHRIVGCLVAEPIKTAY 199
BLAST of mRNA_P-wetherbeei_contig21115.1.1 vs. uniprot
Match: A0A7S2M707_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M707_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 6.030e-9 Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 1
Query: 7 QLFLDFGQRSFGKPVHCHRCGLLFVKGIEQEEAEHSKFCRRAIATTGSGIPFTGWKTERIV 189
QLFLDFGQ SFGK C+ CG++ V G+ +++ +H+K C+ G+ GWK ER V
Sbjct: 92 QLFLDFGQASFGKRTVCNICGMMRVHGVTEDDVQHAKICK----DYKEGVTCLGWKNERKV 148
BLAST of mRNA_P-wetherbeei_contig21115.1.1 vs. uniprot
Match: R1C5H1_EMIHU (zf-C2H2_3 domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1C5H1_EMIHU) HSP 1 Score: 60.5 bits (145), Expect = 1.560e-8 Identity = 28/68 (41.18%), Postives = 39/68 (57.35%), Query Frame = 1
Query: 7 QLFLDFGQRSFGKPVHCHRCGLLFVKGIEQEEAEHSKFCRRAIATTGSGIPFTGWKTERIVWRLPPNS 210
QL+LDFGQRSFG+ + C CGL++ +G +EA H RA+ G P ++E + RLP S
Sbjct: 2 QLYLDFGQRSFGRQITCPECGLMYTEGEPNDEAGHRAHHERALR----GAPMRECESESVACRLPDGS 65
BLAST of mRNA_P-wetherbeei_contig21115.1.1 vs. uniprot
Match: A0A1Z5K1X0_FISSO (N-acetyltransferase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K1X0_FISSO) HSP 1 Score: 61.6 bits (148), Expect = 2.750e-8 Identity = 25/62 (40.32%), Postives = 39/62 (62.90%), Query Frame = 1
Query: 4 KQLFLDFGQRSFGKPVHCHRCGLLFVKGIEQEEAEHSKFCRRAIATTGSGIPFTGWKTERIV 189
+QL+LD GQR FGKPVHCH CG+++V G++++ H++ C G+ +T R+V
Sbjct: 41 EQLYLDLGQRDFGKPVHCHTCGMMYVPGVKEDGMTHAQRCH----VFQHGVRWTPTPAMRLV 98
BLAST of mRNA_P-wetherbeei_contig21115.1.1 vs. uniprot
Match: A0A7S3AIS9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AIS9_9EUKA) HSP 1 Score: 59.3 bits (142), Expect = 5.640e-8 Identity = 27/66 (40.91%), Postives = 41/66 (62.12%), Query Frame = 1
Query: 4 KQLFLDFGQRSFGKPVHCHRCGLLFVKGIEQEEAEHSKFCRRAIATTGSGIPFTGWKTERIVWRLP 201
+Q++LDFGQR+FG+ V C +CG+ + +G +E H K R+A+A G+ G ER+V LP
Sbjct: 24 EQMYLDFGQRTFGRHVLCEQCGMRYCEGEPTDEEAHRKHHRKALA----GVIVRGGAAERLVHTLP 85 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21115.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig21115.1.1 >prot_P-wetherbeei_contig21115.1.1 ID=prot_P-wetherbeei_contig21115.1.1|Name=mRNA_P-wetherbeei_contig21115.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=171bp SKQLFLDFGQRSFGKPVHCHRCGLLFVKGIEQEEAEHSKFCRRAIATTGSback to top mRNA from alignment at P-wetherbeei_contig21115:665..1177+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig21115.1.1 ID=mRNA_P-wetherbeei_contig21115.1.1|Name=mRNA_P-wetherbeei_contig21115.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=513bp|location=Sequence derived from alignment at P-wetherbeei_contig21115:665..1177+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig21115:665..1177+ >mRNA_P-wetherbeei_contig21115.1.1 ID=mRNA_P-wetherbeei_contig21115.1.1|Name=mRNA_P-wetherbeei_contig21115.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=513bp|location=Sequence derived from alignment at P-wetherbeei_contig21115:665..1177+ (Phaeothamnion wetherbeei SAG_119_79)back to top |