mRNA_P-wetherbeei_contig211.1.8 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig211.1.8
Unique NamemRNA_P-wetherbeei_contig211.1.8
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig211.1.8 vs. uniprot
Match: D7FN62_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN62_ECTSI)

HSP 1 Score: 423 bits (1087), Expect = 2.760e-115
Identity = 402/1338 (30.04%), Postives = 533/1338 (39.84%), Query Frame = 1
Query: 4363 ARPMPEQLREWCPSVDWAQLVEKILELMHAVAESSAGCGSG--GHGGAAGGEAAVWAVLAGDAA-----DMSTVAAAAF---------PAAAELMRHSTALLTALTTLWPPLLDAVLQFPSLPACLEFGLVRTPEAAVRREVAAGVLRMATELGGEAERRRAARLFAETLLAALPSPGDXXXXXXXXXXXXXXXXXXXXXXVSYCGEYFGLLAELVRLPGGIP-EDTTGLCLELAAFLARRPVMETSEDECDPALGGCMLLLHTVLTALPSGQRSNVKLALGT------------------------------------------------------------------------------------------AGLPRELFDRCLFAPPPLPLSGGGDAPGAKTGRS----GSXXXXXXXXXXXXXXXXXXXXXXGRPRPPKCKHAESRRLAFLLLQEAIDDCLGNLACVLALALPHHHLGLTLEEQERRRAREVR-RTSHHNLLGPAPGAMALAAAAATHGTTHGSSWAGMN---GAAAGDGSASLLHVSSFGVQPKHMSKHPS--GYIGLKNPGCICYMNSTMQQLFMIPGFRSDVLAFGGPAGAVGYSGAXXXAIESSAGGRGHDSVGTAASGASEXXXXXXXXXXXXXXXXXXGXXXXXXXXDDDGHASLMWQLQRMFGHLQ-----------ESDKAHFSPRGFCEALRGWDGAATDVNVQQDASEFLALLFQRLEASVQGTVGEDMLRRSFGGVLNHVLAADAGGXXXXXXXXXXGGQRLRSERAEPFTFVSVKVKDMHSLEKSLELYVRGETVEYAWEEPAKAATAATGASADSGGGDGKAAAAGGTTRLSLPTCKRVSFAALPRHLLLHLQRFEFDFHTMQQNKVNDRFQFPTTLDMFPYTEEGLAQQAAADGANVDASGDSAAAGXXXXXXXXATIAMTAAPATRAAGGEDGIPERLRRED--------CLYQLAGVVVHMGTANNGHYYSYCRERGGARRWFEFNDSVVAAFDPSNLEAECFGGLDADGGPAXXXXXXXXXXXXXXXXXXAHCGXXXXHGGYGSQYEHWRSSSMHGGGYGAEVSGAGGHHHRLPVRALKWGGARARNAFLLVYDRVDGGDGSGNSG----------------------------------------------------------GGRV-GAVSPPVLG--------ARVPDPICREIRLENLEFFRKRWVFEPGYYDFLEGLLAESAVAXXXXXXXXXREALIADAVQLGAQFALGTLVQARESALVAAAGRRLLQLLELRPRRCDRLLTALAADPATVRDVLLEGSE 7767
            A+   + LRE    VD  +LV+++L +MH V+  +A  G    G GG           L  DA        S +A AA          P  AE+++H+ +LL  LT L P L   +L  P L   LEF L+ TPE  VRREV+ GVLRMA  L  +  +  + ++    LL  LP                           S C  Y  L+  L+     +P  +   LCL LA  +  RPV+E SE++ DP L G M  L   L  LP  +R+ VK   G                                                                                            GL REL +RCLF+   LP   G     + +G      G                       G P P KCK  +SR +AF+LL E    C  NL   +AL  P H LG    E  RRR  E + R      +G               GTT  S  A  +                 +SFG QP H++KH S  G++GLKN GCICYMNST+QQLFM+P FR  VL F                       R HD                                      DD    SLMWQLQ MF HLQ           ES+KAHF+P G   +LR W+G A DV VQQDASEF+   FQ++E  V G+  E++L++SFGG+ ++ L A+ G               L SER EPF+++SV+VK+M +L ++LE++   E V + W++   A T                   G    ++L T KR S  +LP HLL+HL+RF+FDF TMQQ K+NDR +FP  L+M+PYT+EG A                            AT A  +        G +G    + +E+          Y LAGVVVHMGTAN+GHYYSY R R G   W EFND+VV+ FD  ++EAEC+GG +                                +  + + Y+  RS     G Y + V+G+G            W   R RNAF+LVYDRV      G  G                                                          GG+  GAV   VLG        ARVP    R+I  ENLEF+RK+ V +   Y FL+ L+ ++              A  A A++L  +F LGTLVQA+E  ++      + Q L LRP  C  LL  L   P+TV+++LL   E
Sbjct:  930 AKSAKDVLRELYAGVDLPKLVQRMLVVMHEVSRPTAETGRERTGFGG-----------LDSDARYGHHNAPSALAVAAVEEADGKHRPPPQAEVVQHTMSLLGTLTELQPELSSVMLSSPGLGPALEFSLLHTPEKLVRREVSTGVLRMAISLR-KTSKEDSVQVLLRLLLPFLPEVEQYE---------------------SRCDTYLSLVGWLIGQSNAMPPNEQADLCLHLADLICARPVVEQSEEDQDPVLAGYMTFLKKALKTLPDCRRAEVKATAGADVIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEAGVGSPSAAATRAVAAVTTAAGQLVGGMWGAGRATRGGRQEEGXXXXXXXXXXXRGLVRELVERCLFS---LPHERGSSTVSSSSGSGVEGGGVGMLRGGGAGDVCAAVGDDDGFEGIPLP-KCKSDKSREVAFILLNELATGCASNLDLAVALVGPQHFLGRNSAEGRRRRNGEQQDRFRSSGGIG---------------GTTSSSQSAAEDRXXXXXXXXXXXXXXXAASFGQQPHHIAKHKSKTGFVGLKNMGCICYMNSTLQQLFMVPEFREGVLDF-----------------------RDHDQT----------------------------------PPDD----SLMWQLQNMFSHLQDATRCSLLVNQESEKAHFNPVGLVRSLRDWEGQALDVMVQQDASEFITQFFQQVEGQVMGSPSENILKQSFGGLYSNELLAEGG--------------LLYSERPEPFSYISVEVKNMKTLAEALEVFTAEEVVSFKWDKEINAET-------------------GERQAVTLNTKKRCSIKSLPNHLLIHLKRFDFDFDTMQQTKINDRLEFPIELNMYPYTKEGRA----------------------------ATTAAASKEGGHEEVGTEGADAEVEKEEEPAKPEEYYHYHLAGVVVHMGTANSGHYYSYIRPRDGGGEWLEFNDTVVSTFDVEDMEAECYGGEE--------------------------------NSQHSTSYQ--RSQHAQQGQYSSVVNGSG----XXXXXXXAWRRERTRNAFMLVYDRVMPEQQQGEPGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDWKRGGKGRGAV---VLGPRRRKRFRARVPAVFMRQIHRENLEFWRKKNVLDKSNYAFLQKLVFQATDEDG---------ASTASALRLACRFTLGTLVQAQEREVMTTWAGMVRQHLPLRPEACRWLLNELVGSPSTVKELLLSPEE 2043          
BLAST of mRNA_P-wetherbeei_contig211.1.8 vs. uniprot
Match: A0A6H5KLT8_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLT8_9PHAE)

HSP 1 Score: 404 bits (1037), Expect = 3.550e-110
Identity = 400/1352 (29.59%), Postives = 528/1352 (39.05%), Query Frame = 1
Query: 4363 ARPMPEQLREWCPSVDWAQLVEKILELMHAVAESSA-------GCGSG------GHGGAAGGEAAVWAVLAGDAADMSTVAAAAFPAAAELMRHSTALLTALTTLWPPLLDAVLQFPSLPACLEFGLVRTPEAAVRREVAAGVLRMATELGGEAERRRAARLFAETLLAALPSPGDXXXXXXXXXXXXXXXXXXXXXXVSYCGEYFGLLAELVRLPGGIP-EDTTGLCLELAAFLARRPVMETSEDECDPALGGCMLLLHTVLTALPSGQRSNVKLALGT------------------------------------------------------------------------------------AGLPRELFDRCLFAPPPLPLSGGGDAPGAKTGRS----GSXXXXXXXXXXXXXXXXXXXXXXGRPRPPKCKHAESRRLAFLLLQEAIDDCLGNLACVLALALPHHHLGLTLEEQERRRAREVRRTSHHNLLGPAPGAMALAAAAATHGTTHGSSWAGMNGAAAGDGSA---SLLHVSSFGVQPKHMSKHPS--GYIGLKNPGCICYMNSTMQQLFMIPGFRSDVLAFGGPAGAVGYSGAXXXAIESSAGGRGHDSVGTAASGASEXXXXXXXXXXXXXXXXXXGXXXXXXXXDDDGHASLMWQLQRMFGHLQESDKAHFSPRGFCEALRGWDGAATDVNVQQDASEFLALLFQRLEASVQGTVGEDMLRRSFGGVLNHVLAADAGGXXXXXXXXXXGGQRLRSERAEPFTFVSVKVKDMHSLEKSLELYVRGETVEYAWEEPAKAATAATGASADSGGGDGKAAAAGGTTRLSLPTCKRVSFAALPRHLLLHLQRFEFDFHTMQQNKVNDRFQFPTTLDMFPYTEEGLAQQAAADGANVDASGDSAAAGXXXXXXXXATIAMTAAPATRAAGGE-DGIPERLRREDCL-YQLAGVVVHMGTANNGHYYSYCRERGGARRWFEFNDSVVAAFDPSNLEAECFGGLDADGGPAXXXXXXXXXXXXXXXXXXAHCGXXXXHGGYGSQYEHWRSSSMHGGGYGAEVSGAGGHHHRLPVRALKWGGARARNAFLLVYDRVDGGDGSGNS-------------------------------------------------------GGGRVGAVSPPV----LGARVPDPICREIRLENLEFFR-------------------------------------------------KRWVFEPGYYDFLEGLLAESAVAXXXXXXXXXREALIADAVQLGAQFALGTLVQARESALVAAAGRRLLQLLELRPRRCDRLLTALAADPATVRDVLLEGSE 7767
            A+   + LRE    VD  +LV+++L +MH V+  +A       G G        GH  A     +  AV A + AD         P  AE+++H+ +LL  LT L P L   +L  P L   LEF L+ TPE  VRREV+ GVLRMA  L      R+ +++                                     S C  Y  L+  L+     +P  +   LCL LA  +  RPV+E SE++ DP L G M  L   L  LP  +R+ VK   G                                                                                      GL REL +RCLF+   LP   G     + +G      G                       G P P KCK  +SR +AF+LL E    C  NL   +AL  P H LG    E  RRR  E +                  A+    GTT  S  A  +            S    +SFG QP H++KH S  G++GLKN GCICYMNST+QQLFM+P FR  VL F                       R HD                                      DD    SLMWQLQ MF HLQES+KAHF+P G   +LR W+G A DV VQQDASEF+   FQ++E  V G+  E++L++ FGGV ++ L A+ G               L SER EPF+++SV+VK+M +L ++LE++   E V + W++   A T                   G    ++L T KR S  +LP +LL+HL+RF+FDF TMQQ K+NDR +FP  L+M+PYT+EG A    A G      G     G                  T+ AG E +   E  + E+   Y LAGVVVHMGTAN+GHYYSY R R G   W EFND+VV+ FD  ++EAECFGG +                                +  + + Y+  RS     G Y +  +G+G      P  A  W   R RNAF+LVYDRV      G S                                                       G GR G V  P       ARVP    R+I  ENLEF+R                                                 K+ V +   Y FL+ L+ ++                 A A++L  +F LGTLVQA+E  L+      + Q L LRP  C  LL  L   P+T++++LL   E
Sbjct:  208 AKSAKDVLRELYAGVDLPKLVQRMLVVMHEVSRPTAETVREHAGFGGDDSNARYGHHNAP----SALAVAAVEEADGKHRP----PPQAEVVQHTMSLLCTLTELQPELSSVMLSSPGLGPALEFSLLHTPEKLVRREVSTGVLRMAISL------RKTSKV---------------------------------EQYESRCDTYLNLVGWLIGQSNAMPPNEQADLCLHLADLICARPVVEQSEEDQDPVLAGYMTFLKKALKTLPDCRRAEVKATAGADVIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGLVRELVERCLFS---LPHERGSSTVSSSSGSGVEGGGVGILRGGGAGDGGAAVEDGDEFEGIPLP-KCKSDKSREVAFILLNELATGCAPNLDLTVALVGPQHFLGRNSAEGRRRRNDEQQDR--------------FRASGGIRGTTSSSQSAAEDXXXXXXXXXXXXSRARAASFGQQPHHIAKHKSKTGFVGLKNMGCICYMNSTLQQLFMVPEFREGVLDF-----------------------RDHDQT----------------------------------PPDD----SLMWQLQNMFSHLQESEKAHFNPVGLVRSLRDWEGQALDVMVQQDASEFITQFFQQVEGQVMGSASENILKQCFGGVYSNELLAEGG--------------LLYSERPEPFSYISVEVKNMKTLAEALEVFTAEEVVSFKWDKEINAET-------------------GERQAVTLNTKKRCSIKSLPNYLLIHLKRFDFDFDTMQQTKINDRLEFPIELNMYPYTKEGRAATTTAAGKE----GGHEEVG------------------TKGAGAEVEKEEEPAKPEEYYHYHLAGVVVHMGTANSGHYYSYIRPRDGGGEWLEFNDTVVSTFDVEDMEAECFGGEE--------------------------------NSQHSTSYQ--RSHHAQQGQYSSVGNGSGS--SSSPSSA--WRRERTRNAFMLVYDRVMPEQQQGESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKRGGKGRGGVVLGPRRRKRFRARVPAVFMRQIHWENLEFWRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKNVLDKSNYAFLQKLVFQATDEDGVST---------ASALRLACRFTLGTLVQAQERELMTTWAGMVRQHLPLRPEACRWLLKELGGSPSTLKELLLSPEE 1331          
BLAST of mRNA_P-wetherbeei_contig211.1.8 vs. uniprot
Match: A0A4D9CLS1_9STRA (USP domain-containing protein n=5 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLS1_9STRA)

HSP 1 Score: 402 bits (1034), Expect = 7.520e-109
Identity = 341/1042 (32.73%), Postives = 458/1042 (43.95%), Query Frame = 1
Query: 4648 LLDAVLQFPSLPACLEFGLVRTPEAAVRREVAAGVLRMATELGGEAERRRAA-------------------RLFAETLLAALPSPGDXXXXXXXXXXXXXXXXXXXXXXVSYCGEYFGLLAELVRLPGGIPE-DTTGLCLELAAFLARRPVMETSEDECDPALGGCMLLLHTVLTALP---SGQRSNVKLALGTAGLPRELFDRCLFAPPPLPLSGGGDAPGAKTGRSGSXXXXXXXXXXXXXXXXXXXXXXGRPRPPKCKHAESRRLAFLLLQEAIDDCLGNLACVLALALPHHHLGLTLEEQERRRAR-----------------EVRRTSHHNLLGPAPGAMALAAAAATHGTTHGSSWAGMNGAAAGDGSASLLHVSSFGVQPKHMSKHPSGYIGLKNPGCICYMNSTMQQLFMIPGFRSDVLAFGGPAGAVGYSGAXXXAIESSAGGRGHDSVGTAASGASEXXXXXXXXXXXXXXXXXXGXXXXXXXXDDDGHASLMWQLQRMFGHLQESDKAHFSPRGFCEALRGWDGAATDVNVQQDASEFLALLFQRLEASVQGTVGEDMLRRSFGGVLNHVLAADAGGXXXXXXXXXXGGQRLRSERAEPFTFVSVKVKDMHSLEKSLELYVRGETV-EYAWEEPAKAATAATGASADSGGGDGKAAAAGGTTRLSLPTCKRVSFAALPRHLLLHLQRFEFDFHTMQQNKVNDRFQFPTTLDMFPYTEEGLAQQAAADGANVDASGDSAAAGXXXXXXXXATIAMTAAPATRAAGGEDGIPERLRREDCLYQLAGVVVHMGTANNGHYYSYCRERGGARR-WFEFNDSVVAAFDPSNLEAECFGGLDADGGPAXXXXXXXXXXXXXXXXXXAHCGXXXXHGGYGSQYEHWRSSSMHGGGYGAEVSGAGGHHHRLPVRALKWGGARARNAFLLVYDRVD--GGDGSGNSGGGRVGAVSPPVLGARVPDPI--CREIRLENLEFFR-KRWVFEPGYYDFLEGLLAESAVAXXXXXXXXXREALIADAVQLGAQFALGTLVQARE 7632
            LLD +L  P L   L FGL+  P+ A+RR +A GV R+  E     ER+ A                    ++  ET   +  +  D                         C EYF LL  L++ P  + E D  G+  +LA  + RR V+E SE + D  L G +  L  +L  LP    G RS VK+ LG  GL +ELFDRCLFA   +P +    A   +T                             P PPKCKH  SR LA  L+ E   +C  NL  V+A+   H+ LGL+ +E+ERRR +                 ++        LG A G +AL AA+++                    +AS L           +SK+ +GY+GLKN GCICYMNST+QQLF + GFR  +LAF                                                                 ++D   SLM+QLQR+F HLQESDKA+F+P+GFC AL+ WDG  TDV VQQD S+FL + FQ++E   QGT  E++LR +FGG L H L A+ G                 S R EP  F+SV V+++ +L+++LE Y+  E + +Y WE                     K    G   + + PT KR S AALPRHL+LHL+RFEFD+ TMQQ K+NDR +FP  LDM+PYT EG        G  + A+G+             A  A      T++A G    PE       LY+LAGVV+HMGTAN+GHYYSY RERGG R  WFEFND+VV  F+P++LE ECFGG +  GG                                                     +G GG+H         W   R RNAFLLVYDR D    D + N+   R   V  P+L   + + +   R+  +    +F     + EP Y          +AV          + AL+   ++L  +F LGTL +AR+
Sbjct: 1901 LLDVILGSPLLRQLLHFGLLLAPDEALRRAIARGVHRLCVEGRRRRERKEAQAEEKEGRKKRNIETSAEDNKISKETRSLSHRAVLDPVRGFLHPLIDLVETVGEEGGG---CVEYFKLLTRLLKAPDALLEVDPEGMACKLAGQIRRRRVVEASETDEDQVLQGLLTSLRALLAFLPHRGDGTRS-VKVMLGQGGLLQELFDRCLFA---MPSTDPNTARYIET-----------------------------PPPPKCKHPVSRNLALGLVLELSAECPDNLRKVVAVLERHNPLGLSADEKERRRLKVXXXXXXXXXXXXXXXXQIWGRQRSGSLG-ASGQLALNAASSS-------------------AAASSLQCG--------LSKNRTGYVGLKNLGCICYMNSTLQQLFHVKGFREGILAF--------------------------------------------------------------EDAEEDKEESLMYQLQRVFAHLQESDKAYFNPQGFCHALKNWDGEPTDVFVQQDVSDFLLMFFQQVEGMTQGTKCEEVLRHAFGGTLVHELIAEGG---------------RYSSRLEPCYFLSVMVQNIQTLDQALEAYISEEILSDYTWET--------------------KDPLTGKAMKEATPTVKRASLAALPRHLILHLKRFEFDYETMQQIKINDRLEFPVDLDMYPYTLEGRTAVRKG-GTGISAAGN-------------AEDAAELRERTQSAAGHP--PEYY-----LYRLAGVVIHMGTANSGHYYSYIRERGGERSGWFEFNDTVVTDFNPADLEVECFGGQETRGG-----------------------------------------------------TGGGGYHG-----GRNWARERIRNAFLLVYDRCDIRAEDDALNTVAHRP-QVPTPILEEILWENLDFWRKTNILTRPYFEFMEQLLEPVY--------RPTAVQREEQAEDPGQAALLESGLRLATKFMLGTLTEARD 2693          
BLAST of mRNA_P-wetherbeei_contig211.1.8 vs. uniprot
Match: I2CRD3_NANGC (Ubiquitin carboxyl-terminal hydrolase 7 n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRD3_NANGC)

HSP 1 Score: 370 bits (950), Expect = 6.360e-102
Identity = 300/901 (33.30%), Postives = 399/901 (44.28%), Query Frame = 1
Query: 4999 LCLELAAFLARRPVMETSEDECDPALGGCMLLLHTVLTALP---SGQRSNVKLALGTAGLPRELFDRCLFAPPPLPLSGGGDAPGAKTGRSGSXXXXXXXXXXXXXXXXXXXXXXGRPRPPKCKHAESRRLAFLLLQEAIDDCLGNLACVLALALPHHHLGLTLEEQERRRAR-----------------EVRRTSHHNLLGPAPGAMALAAAAATHGTTHGSSWAGMNGAAAGDGSASLLHVSSFGVQPKHMSKHPSGYIGLKNPGCICYMNSTMQQLFMIPGFRSDVLAFGGPAGAVGYSGAXXXAIESSAGGRGHDSVGTAASGASEXXXXXXXXXXXXXXXXXXGXXXXXXXXDDDGHASLMWQLQRMFGHLQESDKAHFSPRGFCEALRGWDGAATDVNVQQDASEFLALLFQRLEASVQGTVGEDMLRRSFGGVLNHVLAADAGGXXXXXXXXXXGGQRLRSERAEPFTFVSVKVKDMHSLEKSLELYVRGETV-EYAWEEPAKAATAATGASADSGGGDGKAAAAGGTTRLSLPTCKRVSFAALPRHLLLHLQRFEFDFHTMQQNKVNDRFQFPTTLDMFPYTEEGLAQQAAADGANVDASGDSAAAGXXXXXXXXATIAMTAAPATRAAGGEDGIPERLRREDCLYQLAGVVVHMGTANNGHYYSYCRERGGARR-WFEFNDSVVAAFDPSNLEAECFGGLDADGGPAXXXXXXXXXXXXXXXXXXAHCGXXXXHGGYGSQYEHWRSSSMHGGGYGAEVSGAGGHHHRLPVRALKWGGARARNAFLLVYDRVDGGDGSGNSGGGRVGAVSPPVLGARVPDPICRE-IRLENLEFFRKRWVFEPGYYDFLEGLLAESAVAXXXXXXXXXREALIADAVQLGAQFALGTLVQARE 7632
            +  +LA  + RR V+E SE + D  L G +  L  +L  LP    G RS VK+ LG  GL +ELFDRCLFA   +P +    A   +T                             P PPKCKH  SR LA  L+ E   +C  NL  V+A+   H+ LGL+ +E+ER                     ++        LG A G +AL AA+++                    +AS L           +SK+ +GY+GLKN GCICYMNST+QQLF + GFR  +LAF                                                                 ++D   SLM+QLQR+F HLQESDKA+++P+GFC AL+ WDG  TDV VQQD S+FL + FQ++E   QGT  E++LR +FGG L H L A+ G                 S R EP  F+SV V+++ +L+++LE Y+  E + +Y WE                     K    G   + + PT KR S AALPRHL+LHL+RFEFD+ TMQQ K+NDR +FP  LDM+PYT EG        G  + A+G+             A  +      T++A G    PE       LY+LAGVV+HMGTAN+GHYYSY RERGG R  WFEFND+VV  F+P++LE ECFGG +  GG                                                     +G GG+H         W   R RNAFLLVYDR D           R      P +   + + I RE +          R  FE      LE +   +AV          + AL+   ++L  +F LGTL +AR+
Sbjct:    1 MACKLAGQIRRRRVVEASETDEDQVLQGLLTSLRALLAFLPHRGDGTRS-VKVMLGQGGLLQELFDRCLFA---MPSTDPNTARYIET-----------------------------PPPPKCKHPVSRNLALGLVLELSAECPDNLRKVVAVLERHNPLGLSADEKERXXXXXXXXXXXXXXXXXXXXXQIWGRQRSGSLG-ASGQLALNAASSS-------------------AAASSLQCG--------LSKNRTGYVGLKNLGCICYMNSTLQQLFHVKGFREGILAF--------------------------------------------------------------EDAEEDKEESLMYQLQRVFAHLQESDKAYYNPQGFCHALKDWDGEPTDVFVQQDVSDFLLMFFQQVEGMTQGTKCEEVLRHAFGGTLVHELIAEGG---------------RYSSRLEPCYFLSVMVQNIQTLDQALEAYISEEILSDYTWET--------------------KDPLTGKAVKEATPTVKRASLAALPRHLILHLKRFEFDYETMQQIKINDRLEFPVDLDMYPYTLEGRTAVRKG-GTGIAAAGN-------------AEDSAELRERTQSAAGHP--PEYY-----LYRLAGVVIHMGTANSGHYYSYIRERGGERSGWFEFNDTVVTDFNPADLEVECFGGQETRGG-----------------------------------------------------TGGGGYHG-----GRNWARERIRNAFLLVYDRCD----IRPEDDARNTVAHRPQVPTPILEEILRENLDFWRKTNILTRPYFE-FMEQLLEPVYRPTAVEREEQAEDPGQAALLESGLRLATKFMLGTLTEARD 659          
BLAST of mRNA_P-wetherbeei_contig211.1.8 vs. uniprot
Match: A0A7S4D6W9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6W9_HETAK)

HSP 1 Score: 292 bits (747), Expect = 6.090e-83
Identity = 223/611 (36.50%), Postives = 277/611 (45.34%), Query Frame = 1
Query: 5692 HMSKHPSGYIGLKNPGCICYMNSTMQQLFMIPGFRSDVLAFGGPAGAVGYSGAXXXAIESSAGGRGHDSVGTAASGASEXXXXXXXXXXXXXXXXXXGXXXXXXXXDDDGHASLMWQLQRMFGHLQESDKAHFSPRGFCEALRGWDGAATDVNVQQDASEFLALLFQRLEASVQGTVGEDMLRRSFGG-VLNHVLAADAGGXXXXXXXXXXGGQRLRSERAEPFTFVSVKVKDMHSLEKSLELYVRGETVEYAWE-EPAKAATAATGASADSGGGDGKAAAAGGTTRLSL-PTCKRVSFAALPRHLLLHLQRFEFDFHTMQQNKVNDRFQFPTTLDMFPYTEEGLAQQAAADGANVDASGDSAAAGXXXXXXXXATIAMTAAPATRAAGGEDGIPERLRREDCLYQLAGVVVHMGTANNGHYYSYCRERGGARRWFEFNDSVVAAFDPSNLEAECFGGLDAD-GGPAXXXXXXXXXXXXXXXXXXAHCGXXXXHGGYGSQYEHWRSSSMHGGGYGAEVSGAGGHHHRLPVRALKWGGARARNAFLLVYDRVDGGDGSGNSGGGRVGAVSPPVLGARVPDPICREIRLENLEFFRKRWVFEPGYYDFLEGLL 7512
            H +K  +G++GLKN GCICYMNS++QQ FMIP FR ++L F                                                                 D+D   SLM QLQ +F  LQES+KA+++P  FC A + W+G  TDV VQQDASEFL + FQ +E  + G+  E ML+ SFGG + N +LA + G                RSERAEPF ++SV V++  +LE +L  YV GE+VEY WE EP +                      GG  R  L PT KR S   LPRHL++HL+RFEFDF TMQQ K+N RF+F   LDM PYT EG            D SG                           A G     ER   +   Y L G VVH+GTAN+GHYYSY RERG   RWFEFND+ V  FDP+ L  ECFGG +   GG AXXXXXXXXXX                                          GAG    ++            RNAFL++YDR D           R GA       A +P  I  E R EN   + ++ + +  Y+DFL GLL
Sbjct:   28 HFAKSKTGFVGLKNLGCICYMNSSLQQFFMIPEFRRELLGF--------------------------------------------------------------ECEDEDPDESLMHQLQLLFAQLQESEKAYYNPAPFCRAFKNWEGEPTDVLVQQDASEFLTMFFQHVEGGIMGSASEGMLKHSFGGEICNELLAKEQG---------------KRSERAEPFYYLSVDVRNNKTLEAALGAYVAGESVEYTWESEPEEE---------------------GGEVRKELLPTEKRASLKRLPRHLVVHLKRFEFDFETMQQAKINARFEFGMDLDMLPYTVEG----------REDGSGP--------------------------AEGGGAAAERGPADYYNYTLCGAVVHVGTANSGHYYSYVRERG-TDRWFEFNDTYVGDFDPAQLPDECFGGEEERFGGGAXXXXXXXXXXVSI---------------------------------------GAGNLREKI------------RNAFLVIYDRNDV---WAEEAAERRGAAPGTHYKAPLPAAIAEETRRENAAHWTRKNLHDRRYFDFLTGLL 449          
BLAST of mRNA_P-wetherbeei_contig211.1.8 vs. uniprot
Match: A0A836CHU2_9STRA (USP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHU2_9STRA)

HSP 1 Score: 284 bits (727), Expect = 5.620e-82
Identity = 188/437 (43.02%), Postives = 230/437 (52.63%), Query Frame = 1
Query: 5752 MNSTMQQLFMIPGFRSDVLAFGGPAGAVGYSGAXXXAIESSAGGRGHDSVGTAASGASEXXXXXXXXXXXXXXXXXXGXXXXXXXXDDDGHASLMWQLQRMFGHLQESDKAHFSPRGFCEALRGWDGAATDVNVQQDASEFLALLFQRLEASVQGTVGEDMLRRSFGGVLNHVLAADAGGXXXXXXXXXXGGQRLRSERAEPFTFVSVKVKDMHSLEKSLELYVRGETVEYAWEEPAKAATAATGASADSGGGDGKAAAAGGTTRLSLPTCKRVSFAALPRHLLLHLQRFEFDFHTMQQNKVNDRFQFPTTLDMFPYTEEGLAQQAAADGANVDASGDSAAAGXXXXXXXXATIAMTAAPATRAAGGEDGIPERLRREDCLY--QLAGVVVHMGTANNGHYYSYCRERGGARRWFEFNDSVVAAFDPSNLEAECFGG 7056
            MN+T+QQ FM+P FR+ VL F G                           G AA   ++                                 + MWQLQ +F HLQES+KAH++P GFC+ALR W+G   DV +QQDASEF+A+L Q+LE  V GT  E  LR +FGGV ++ L A  G                RSER EPF++VSV VKD  +L  +L  +V GETVEY W E A AAT                          LPT KR++   LP HLL+HL+RFEFDF TMQQ K+NDRF+FP  LDM PYT E LA++ AA               XXXXXXXX                ++   E  +R D  Y  QLAGVVVHMGTAN+GHYYS+ RER GARRWFEFND++V   DP++LE ECFGG
Sbjct:    1 MNATLQQFFMVPRFRAAVLGFDG---------------------------GEAALPPAQRED------------------------------AFMWQLQSLFAHLQESEKAHYNPLGFCQALRDWEGEPVDVLMQQDASEFVAMLLQQLEGRVMGTPAEAPLREAFGGVFSNELLAQGG---------------RRSERPEPFSYVSVGVKDTRTLAGALRAFVAGETVEYRWGEGAAAAT--------------------------LPTLKRLAIRELPPHLLIHLKRFEFDFATMQQVKINDRFEFPLELDMRPYTTEALAERDAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKES-DETPKRPDSYYRYQLAGVVVHMGTANSGHYYSFIRERCGARRWFEFNDNLVTEMDPADLETECFGG 338          
BLAST of mRNA_P-wetherbeei_contig211.1.8 vs. uniprot
Match: A0A5D6XY90_9STRA (USP domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XY90_9STRA)

HSP 1 Score: 272 bits (695), Expect = 4.100e-69
Identity = 198/584 (33.90%), Postives = 271/584 (46.40%), Query Frame = 1
Query: 5350 PKCKHAESRRLAFLLLQEAIDDCLGNLACVLALALPHHHLGLTLEEQERRRAREVRRTSHHNLLGPAPGAMALAAAAATHGTTHGSSWAGMNGAAAGDGSASLLHVSSFGVQPKHMSKHPSGYIGLKNPGCICYMNSTMQQLFMIPGFRSDVLAFGGPAGAVGYSGAXXXAIESSAGGRGHDSVGTAASGASEXXXXXXXXXXXXXXXXXXGXXXXXXXXDDDGHASLMWQLQRMFGHLQESDKAHFSPRGFCEALRGWDGAATDVNVQQDASEFLALLFQRLEASVQGTVG----EDMLRRSFGGVLNHVLAADAGGXXXXXXXXXXGGQRLRSERAEPFTFVSVKVKDMHSLEKSLELYVRGETVEYAWEEPAKAATAATGASADSGGGDGKAAAAGGTTRLSLPTCKRVSFAALPRHLLLHLQRFEFDFHTMQQNKVNDRFQFPTTLDMFPYTEEGLAQQ-----AAADGANVDASGDSAAAGXXXXXXXXATIAMTAAPATRAAGGEDGIPERLRREDCLYQLAGVVVHMGTANNGHYYSYCRERGGA----RRWFEFNDSVVAAFDPSNLEAECFGGLD 7062
            PKC+   SR +AF LL+E   +    L  +LA                         +S H L  P+ G  ALA    T      S    +  A           V++  +QP   +K    Y+GLKN GC CY+NST+Q  FMIP FR  +L F   A A   S A                   ++SG                                D   S++++LQ +F HL+ S K +++P+ F  AL+ WDG + DVN+QQDASEFL   FQ++E+ + G       E++L   FGGV ++ L AD G                 SERAEPF F+SV V+D  +L++SL+ +V GETV Y WE   K ++                 A     +++L T KR+S A LP  L++HL+RFEFDF  MQQ K++DRF+FP  LDM+PYT+ G  ++     +A+ GA  D                   +    AP + A             E   Y+L G VVHMGTAN+GHYYS+ RE+  A    R WFEFND++V  FDP  +  ECFGG D
Sbjct: 1909 PKCRSESSRDVAFALLRELSRENPSGLRYLLAQL-----------------------SSQHALKAPSAGPSALAT---TEPPLSASKRKSVKAA---------KDVAAMRLQPLERAK----YVGLKNLGCTCYLNSTIQSFFMIPRFRRQILRFHAAAAAPSESSA-------------------SSSG--------------------------------DASTSVLYELQSLFAHLEGSAKPYYNPKPFTAALKTWDGESIDVNLQQDASEFLTSFFQQIESEMNGVRSGHGDENLLTTFFGGVFSNELVADGG---------------RYSERAEPFHFISVPVRDRKNLKESLDAWVEGETVSYTWE---KGSSXXXXXXXXXXXXXXXXXAPSADEKVTLDTHKRISIAKLPDQLIIHLKRFEFDFERMQQMKLHDRFEFPMALDMYPYTKAGQEEKRRRARSASSGATDD-------------------VTAADAPRSSAXXXXXSAARTTAPEYSQYELVGTVVHMGTANSGHYYSFLREQDTADSASRHWFEFNDTIVTPFDPQQIPDECFGGED 2365          
BLAST of mRNA_P-wetherbeei_contig211.1.8 vs. uniprot
Match: A0A7S1UJ59_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJ59_9STRA)

HSP 1 Score: 245 bits (625), Expect = 3.470e-67
Identity = 163/455 (35.82%), Postives = 221/455 (48.57%), Query Frame = 1
Query: 5695 MSKHPSGYIGLKNPGCICYMNSTMQQLFMIPGFRSDVLAFGGPAGAVGYSGAXXXAIESSAGGRGHDSVGTAASGASEXXXXXXXXXXXXXXXXXXGXXXXXXXXDDDGHASLMWQLQRMFGHLQESDKAHFSPRGFCEALRGWDGAATDVNVQQDASEFLALLFQRLEASVQGTVGEDMLRRSFGGVLNHVLAADAGGXXXXXXXXXXGGQRLRSERAEPFTFVSVKVKDMHSLEKSLELYVRGETVEYAWEEPAKAATAATGASADSGGGDGKAAAAGGTTRLSLPTCKRVSFAALPRHLLLHLQRFEFDFHTMQQNKVNDRFQFPTTLDMFPYTEEGLAQQAAADGANVDASGDSAAAGXXXXXXXXATIAMTAAPATRAAGGEDGIPERLRREDCL-YQLAGVVVHMGTANNGHYYSYCRERGGARRWFEFNDSVVAAFDPSNLEAECFGG 7056
            + K  +GY+GL N GC CY+NS +QQLFM+P FR  VL F                                                          XXXXXXX +D    L++QLQ MF HLQ S+KA ++PR F  A R WD    DV VQQDASEF + L  +LE  + GT  E++LR +  G ++  L A                ++ R+ R + F  + V ++++ SLE+S+  ++ GETVEY WEE             +SG  D          + +L T KR+S   LP HL++HL+RF+FD+ T QQ K+ND F+FPT +DM  +T++G A     D   +D  G     G                       G D        +D   Y+L G+V+HMGTAN+GHYYSY RER    +WFEFND+ V  FDP ++ AECFGG
Sbjct:   51 LPKSSTGYVGLTNLGCTCYLNSILQQLFMMPTFRRAVLEF--------------------------------------------------------EDXXXXXXXXEDAAEDLIFQLQNMFAHLQNSEKASYNPRAFTNAFRDWDNMPIDVLVQQDASEFFSNLLTKLEGKLMGTEFENLLRDTVQGTVSQELLAQP--------------EKYRA-REDVFYLIEVPIQNLRSLEESMHKFIEGETVEYTWEE-------------ESGEADENGEKV--VRKETLNTTKRLSLKKLPPHLVIHLKRFDFDYETFQQVKLNDYFEFPTDMDMREFTQDGRA-----DATPLDQRGKGDKDGGEG----------------EGGAGSDAEEYAALPDDYFQYELTGIVIHMGTANSGHYYSYIRERDSDNKWFEFNDTYVGEFDPDDIPAECFGG 398          
BLAST of mRNA_P-wetherbeei_contig211.1.8 vs. uniprot
Match: K3WT18_GLOUD (USP domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WT18_GLOUD)

HSP 1 Score: 264 bits (675), Expect = 7.190e-67
Identity = 172/454 (37.89%), Postives = 242/454 (53.30%), Query Frame = 1
Query: 5716 YIGLKNPGCICYMNSTMQQLFMIPGFRSDVLAFGGPAGAVGYSGAXXXAIESSAGGRGHDSVGTAASGASEXXXXXXXXXXXXXXXXXXGXXXXXXXXDDDGHASLMWQLQRMFGHLQESDKAHFSPRGFCEALRGWDGAATDVNVQQDASEFLALLFQRLEASVQG----TVGEDMLRRSFGGVLNHVLAADAGGXXXXXXXXXXGGQRLRSERAEPFTFVSVKVKDMHSLEKSLELYVRGETVEYAWEEPAKAATAATGASADSGGGDGKAAAAGGTTRLSLPTCKRVSFAALPRHLLLHLQRFEFDFHTMQQNKVNDRFQFPTTLDMFPYTEEGLAQQAAADGANVDASGDSAAAGXXXXXXXXATIAMTAAPATRAAGGEDGIPERLRREDCLYQLAGVVVHMGTANNGHYYSYCRERGGAR---RWFEFNDSVVAAFDPSNLEAECFGG 7056
            Y+GLKN GC CYMNSTMQ  FMIP FR  +L F                          +S  + ASG  +                                 S++++LQ +F HL+ + K++++PR F  AL+ WDG + DVN+QQDASEFL   FQ++E+ + G    +  E++L   FGGV ++ L A+              G R  SERAEPF F+SV V+D  +L++SL+ +V GE V Y WE     A A  G  +D   G+          +++L T KR+S + LP  L++HL+RFEFDF  MQQ K++DRF+FP  LDM+PYT++G  ++     ++   +G S  A  XXXXX  ++          A  G    PE  +     Y+L G VVHMGTAN+GHYYS+ RE+ G     +W+EFND+VV+AF+P  +  ECFGG
Sbjct: 1698 YVGLKNLGCTCYMNSTMQAFFMIPRFRRQILRFNAE----------------------QNSGTSTASGEGK---------------------------------SVLYELQSLFAHLEGTAKSYYNPRPFTSALKTWDGESIDVNLQQDASEFLTSFFQQIESEMNGMGDGSGDENILNTFFGGVFSNELVAE--------------GDRY-SERAEPFHFISVPVRDRKTLKESLDGWVEGEKVSYTWE-----AKAENGQDSDGAAGE----------KVTLDTHKRISISKLPDQLIIHLKRFEFDFERMQQIKLHDRFEFPMELDMYPYTKQGQEEKRKRSSSSASNTGASDEASDXXXXXSKSS----------ARDGRSTAPEYSQ-----YELVGTVVHMGTANSGHYYSFLREQNGGNDYNQWYEFNDTVVSAFNPQQIPDECFGG 2051          
BLAST of mRNA_P-wetherbeei_contig211.1.8 vs. uniprot
Match: H3H200_PHYRM (USP domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H200_PHYRM)

HSP 1 Score: 247 bits (631), Expect = 5.790e-63
Identity = 161/459 (35.08%), Postives = 229/459 (49.89%), Query Frame = 1
Query: 5716 YIGLKNPGCICYMNSTMQQLFMIPGFRSDVLAFGGPAGAVGYSGAXXXAIESSAGGRGHDSVGTAASGASEXXXXXXXXXXXXXXXXXXGXXXXXXXXDDDGHASLMWQLQRMFGHLQESDKAHFSPRGFCEALRGWDGAATDVNVQQDASEFLALLFQRLEASVQG---------TVGEDMLRRSFGGVLNHVLAADAGGXXXXXXXXXXGGQRLRSERAEPFTFVSVKVKDMHSLEKSLELYVRGETVEYAWEEPAKAATAATGASADSGGGDGKAAAAGGTTRLSLPTCKRVSFAALPRHLLLHLQRFEFDFHTMQQNKVNDRFQFPTTLDMFPYTEEGLAQQAAADGANVDASGDSAAAGXXXXXXXXATIAMTAAPATRAAGGEDGIPERLRREDCLYQLAGVVVHMGTANNGHYYSYCRERGGAR---RWFEFNDSVVAAFDPSNLEAECFGG 7056
            Y+GLKN GC CY+NST+Q  FM+P FR  VL                  ++S+ GG                                          +  G  SL ++LQ +F HL+ S K +++PR F  A++ WDG   DVNVQQDASEFL   FQ++E+ + G         T  E++L   FGG  ++ L A+              G R  SER EPF F+SV V+D  +L++SL+ ++ GE V Y WE+           S     GD K  A     +++L T KR+S + LP +L++HL+RFEFDF  MQQ K++DRF FPT LD++PYT+EG  ++      + D  G S                     +T +   +DG       E   Y+L G VVH+GTA++GHYYS+ R++   R   +W+EFND++V  FDP+ +  ECFGG
Sbjct:   41 YVGLKNLGCTCYLNSTIQSFFMMPRFRRQVLR-----------------LQSNGGGS-----------------------------------------EKSGLKSLTYELQSLFAHLEGSAKPYYNPRSFTRAMKTWDGETVDVNVQQDASEFLTSFFQQIESEMNGISAGSGDHYTSDENILNTFFGGEFSNELVAE--------------GDRY-SERFEPFHFISVPVRDRKNLKESLDGWIEGEKVSYTWEK----------GSGSKSEGDVKNDAEE-DEKVTLETHKRISISKLPAYLIIHLKRFEFDFEKMQQIKLHDRFDFPTELDLYPYTKEGQEEKRKRAATSTDDGGTS----------------HDVRLSTSSDSADDG--RTTAPEYSQYELVGTVVHLGTAHSGHYYSFLRDQQVPRDKNQWYEFNDTLVTPFDPAQIPEECFGG 397          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig211.1.8 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN62_ECTSI2.760e-11530.04USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KLT8_9PHAE3.550e-11029.59USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A4D9CLS1_9STRA7.520e-10932.73USP domain-containing protein n=5 Tax=Monodopsidac... [more]
I2CRD3_NANGC6.360e-10233.30Ubiquitin carboxyl-terminal hydrolase 7 n=2 Tax=Na... [more]
A0A7S4D6W9_HETAK6.090e-8336.50Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A836CHU2_9STRA5.620e-8243.02USP domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A5D6XY90_9STRA4.100e-6933.90USP domain-containing protein n=1 Tax=Pythium bras... [more]
A0A7S1UJ59_9STRA3.470e-6735.82Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
K3WT18_GLOUD7.190e-6737.89USP domain-containing protein n=1 Tax=Globisporang... [more]
H3H200_PHYRM5.790e-6335.08USP domain-containing protein n=1 Tax=Phytophthora... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig211contigP-wetherbeei_contig211:1616..10835 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FN62
PFAMsUCH
Model size7767
Max annot lvl2759|Eukaryota
KEGG koko:K11840,ko:K11869
Hectar predicted targeting categoryother localisation
Exons9
Evalue6.75e-152
EggNOG OGsCOG5077@1|root,KOG1866@2759|Eukaryota
EC3.4.19.12
Descriptionubiquitinyl hydrolase activity
Cds size7767
COG categoryO
BRITEko00000,ko01000,ko01002,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig211.1.8prot_P-wetherbeei_contig211.1.8Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig211 1616..10835 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186216.3477042-CDS-P-wetherbeei_contig211:1615..19421683186216.3477042-CDS-P-wetherbeei_contig211:1615..1942Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig211 1616..1942 +
1683186216.3564682-CDS-P-wetherbeei_contig211:2161..38081683186216.3564682-CDS-P-wetherbeei_contig211:2161..3808Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig211 2162..3808 +
1683186216.3638756-CDS-P-wetherbeei_contig211:4038..43411683186216.3638756-CDS-P-wetherbeei_contig211:4038..4341Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig211 4039..4341 +
1683186216.3716764-CDS-P-wetherbeei_contig211:4545..50131683186216.3716764-CDS-P-wetherbeei_contig211:4545..5013Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig211 4546..5013 +
1683186216.3803673-CDS-P-wetherbeei_contig211:5233..55691683186216.3803673-CDS-P-wetherbeei_contig211:5233..5569Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig211 5234..5569 +
1683186216.394172-CDS-P-wetherbeei_contig211:5736..77361683186216.394172-CDS-P-wetherbeei_contig211:5736..7736Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig211 5737..7736 +
1683186216.404305-CDS-P-wetherbeei_contig211:7905..94781683186216.404305-CDS-P-wetherbeei_contig211:7905..9478Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig211 7906..9478 +
1683186216.4121249-CDS-P-wetherbeei_contig211:9602..104691683186216.4121249-CDS-P-wetherbeei_contig211:9602..10469Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig211 9603..10469 +
1683186216.4198632-CDS-P-wetherbeei_contig211:10589..108351683186216.4198632-CDS-P-wetherbeei_contig211:10589..10835Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig211 10590..10835 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig211.1.8

>prot_P-wetherbeei_contig211.1.8 ID=prot_P-wetherbeei_contig211.1.8|Name=mRNA_P-wetherbeei_contig211.1.8|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=2589bp
AALGPSPLFVANVEHFGRSGGFAALLVRIDPDRWSADSARIRFGGGGSGA
GRGDGNPVSIAELAALLSFLRNVAPVLARDFAESFGTRLRDAAFSRLGRL
ADDELKQLEDMASGGCREGTLLDALQQLERLLPLLLRAHDADAAAEGYQL
SLALQLLRRPSFSMRARGVAILSEAVDVAARAAAAASSTAAYFRGNSGGG
VNASNSSGGAYSNSGDNGGAATKGNGWVGPGLRWSDGAALAEWLEVNEVL
HVLLGSNPPDRSVQQQKPMPPPGSPFVSPALPPPGSPTAALVTAAEAATV
VAATSISSAAPLPPPSPSPPQTPPSMSMPMQPEVLKRCEGLFCFMAGRGL
FRRCHLDALWRAAGGPMTAATGKVAVAAVNGAAAAGATTPDAAAAAGPMP
GAVAAAAMSSPHAPIVYRLIAQLVPHLDAAGITAVYEKLRTLSPGYTMAQ
VELIKAFVAGAAAAATAAARTAATPATAQPGSPANVRAASPPNAGANNGR
VTAAAAGGTAGAVVSVFGSGLELLWKAMQESAPVAPDVADAALCALADLL
AAPTAGQRHFGSFSSFGSGDNGGLSAASTGFQREEQLTFLLDMCVENVAR
GISVVLTLRLVQRLADGQPDTMGGRGAGGGVGGTAWPRGGILRDRLLMDL
ERESGILQLTVSGLVAYRKDAARALNSLATDPADAEAAAAAAGLPASDAL
MGATLAGRFPHGEAMQAQLDFLRFVGEHSPAQLTFRHFAQLWRSFFVAEP
GPLCAAESEMFFRWLRRLAPEMNSTYGRQSTYMVTSEETAAQVFSRLLCS
GDGPSVNAVTADAVAAPAGQPNELHADDGVGASGSGAGGSGGSSGAVANS
GGLVVAVSGSGGGLFANMGDEGYGCLEWFFRFANWRTACIGSPEHKLYMS
VQNFDGLRGVDLLWQVLWQTQSERVVQAAMDFLVVLHCRLREGLDRRAAW
LRFVARCMAVISTHAAPANAAAAAVAVAAAPQAARAALAGAAAAPAEELL
VRATALLSRLLDAVGAGDAPPPLQPDKDLSLWAVVGAGGDGGGALSPSPP
PTVTAEVEAAAAQIGVWYTGRGRSRPHELLCDTDHYFELVFRVLEQPHDW
PAARAGAWGLLVRLPDNPRVRAELESLGGRVSAVAAAACVSGSEAGAGRG
GGGDAGESGGSGGSSGSGTPASDSDDGGLDDENAAAAISTGAGFAGSGSR
GGGGGGSNGGSGNDGSGGGEVGGVKAEAPVVPWEQLLPGNSAARLLYRLK
MLEPLLDEPSAEPLRVLDTCIMGPQDPFVAVAESGHRDAKSVAAAAAAAS
AAAAAGADQLRTVFVHGGGLQRLLQLLAADGPPQSDFAAHPLRALCAAAL
LRTVRNLLAPADGGVGSGARVATTEIMDSSEEEDDDGAGAIVDAVTLPED
ALDILSDAALYPGRIPVVEGVAMAALVAGTEVAEDASRGGCTSAAAAAAA
GAAAARPMPEQLREWCPSVDWAQLVEKILELMHAVAESSAGCGSGGHGGA
AGGEAAVWAVLAGDAADMSTVAAAAFPAAAELMRHSTALLTALTTLWPPL
LDAVLQFPSLPACLEFGLVRTPEAAVRREVAAGVLRMATELGGEAERRRA
ARLFAETLLAALPSPGDDDAGGSSDAVSSGGSSGGGGGGVSYCGEYFGLL
AELVRLPGGIPEDTTGLCLELAAFLARRPVMETSEDECDPALGGCMLLLH
TVLTALPSGQRSNVKLALGTAGLPRELFDRCLFAPPPLPLSGGGDAPGAK
TGRSGSSGCCSGGAGEAAMAAEAAAAAAGRPRPPKCKHAESRRLAFLLLQ
EAIDDCLGNLACVLALALPHHHLGLTLEEQERRRAREVRRTSHHNLLGPA
PGAMALAAAAATHGTTHGSSWAGMNGAAAGDGSASLLHVSSFGVQPKHMS
KHPSGYIGLKNPGCICYMNSTMQQLFMIPGFRSDVLAFGGPAGAVGYSGA
SGAAIESSAGGRGHDSVGTAASGASEAALARASSSTAGALAGESGESGGG
GGGDDDGHASLMWQLQRMFGHLQESDKAHFSPRGFCEALRGWDGAATDVN
VQQDASEFLALLFQRLEASVQGTVGEDMLRRSFGGVLNHVLAADAGGGGS
GGGGGGRGGQRLRSERAEPFTFVSVKVKDMHSLEKSLELYVRGETVEYAW
EEPAKAATAATGASADSGGGDGKAAAAGGTTRLSLPTCKRVSFAALPRHL
LLHLQRFEFDFHTMQQNKVNDRFQFPTTLDMFPYTEEGLAQQAAADGANV
DASGDSAAAGADDAGAAAATIAMTAAPATRAAGGEDGIPERLRREDCLYQ
LAGVVVHMGTANNGHYYSYCRERGGARRWFEFNDSVVAAFDPSNLEAECF
GGLDADGGPAAAASAAAAAHHLLGNRGGAHCGGGGAHGGYGSQYEHWRSS
SMHGGGYGAEVSGAGGHHHRLPVRALKWGGARARNAFLLVYDRVDGGDGS
GNSGGGRVGAVSPPVLGARVPDPICREIRLENLEFFRKRWVFEPGYYDFL
EGLLAESAVAAAAAAAAAAREALIADAVQLGAQFALGTLVQARESALVAA
AGRRLLQLLELRPRRCDRLLTALAADPATVRDVLLEGSE
back to top

mRNA from alignment at P-wetherbeei_contig211:1616..10835+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig211.1.8 ID=mRNA_P-wetherbeei_contig211.1.8|Name=mRNA_P-wetherbeei_contig211.1.8|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=9220bp|location=Sequence derived from alignment at P-wetherbeei_contig211:1616..10835+ (Phaeothamnion wetherbeei SAG_119_79)
GCGGCGCTAGGGCCATCGCCTCTCTTCGTCGCAAATGTGGAGCACTTTGG CCGGTCTGGCGGTTTTGCTGCCCTGCTCGTGCGCATCGATCCCGACCGCT GGTCCGCCGATAGTGCCCGCATTAGGTTTGGCGGCGGCGGTTCCGGCGCC GGCCGGGGGGATGGAAATCCCGTGTCGATCGCGGAGCTGGCTGCGCTGTT GTCCTTCCTGCGGAACGTGGCACCGGTGCTGGCGCGCGACTTCGCTGAGT CGTTTGGCACGCGGCTGCGGGACGCGGCCTTTTCACGGCTGGGACGCCTC GCCGACGACGAGCTGAAGCAGCTAGAGGCGAGTTGGTTGGACTGACGGGT CGGGTTTGGCTCGCGCCGAGGGGTCGAGTTTGGCTCGCACGCTCCCTTCG AAGCGCACTTGCAGTGCTCTGAGTCGGAGCTTCGCGGGCTATGCAACCCT TTGTTTCCCTCTCACGTTGTTCGAAGCTGGTGATTTCAACGATTGCACTG TCTGCGACGACGCCTCCGGTGCAATCAAACGCGCTTTTTCCCGCAGGACA TGGCGAGCGGTGGCTGCAGGGAGGGGACGCTGCTGGATGCGCTCCAGCAG CTGGAGAGGCTGCTGCCGCTGCTTCTGCGGGCGCACGACGCCGATGCCGC CGCCGAGGGCTACCAGCTGTCGCTGGCGCTGCAGCTGCTACGGCGGCCCT CCTTCAGTATGCGCGCCCGCGGCGTCGCCATCCTCTCGGAGGCCGTCGAC GTCGCCGCGCGCGCCGCTGCCGCCGCGTCGTCCACTGCTGCCTACTTTCG GGGAAATAGCGGCGGCGGCGTGAACGCAAGTAATAGTAGCGGCGGCGCAT ATAGTAATAGTGGCGACAACGGCGGTGCGGCGACGAAGGGAAACGGCTGG GTGGGGCCCGGGCTGCGATGGTCGGATGGCGCGGCGCTGGCAGAGTGGCT GGAAGTGAATGAAGTGCTCCACGTCTTGCTGGGAAGCAATCCGCCGGATA GAAGTGTGCAGCAGCAAAAGCCAATGCCACCGCCGGGATCACCGTTCGTG TCGCCGGCGCTCCCACCACCGGGATCGCCAACTGCGGCATTGGTGACGGC AGCTGAGGCGGCGACTGTCGTGGCGGCAACATCGATTTCGTCTGCGGCAC CATTACCGCCACCATCGCCGTCGCCGCCGCAAACGCCGCCGTCCATGTCC ATGCCCATGCAGCCGGAGGTCCTGAAGCGATGCGAGGGGCTCTTTTGCTT CATGGCGGGCCGTGGCCTCTTCCGGCGCTGCCATCTCGACGCCCTGTGGC GCGCTGCCGGCGGGCCAATGACGGCGGCAACAGGTAAGGTGGCGGTGGCG GCGGTGAATGGAGCGGCAGCAGCCGGAGCAACGACACCAGATGCGGCGGC GGCAGCGGGGCCGATGCCAGGAGCAGTGGCGGCTGCGGCAATGTCGTCGC CGCACGCGCCGATCGTCTACCGGCTGATCGCGCAGCTTGTGCCGCACCTC GACGCGGCGGGCATCACCGCCGTCTACGAGAAGCTGCGCACGCTGTCGCC TGGCTACACCATGGCGCAAGTCGAACTCATCAAGGCCTTTGTCGCCGGCG CGGCGGCGGCGGCCACGGCGGCAGCGCGGACGGCGGCCACGCCTGCGACT GCGCAACCGGGATCTCCCGCGAACGTACGCGCCGCTTCTCCGCCGAATGC CGGAGCTAACAATGGGCGGGTCACGGCGGCGGCGGCGGGAGGGACGGCGG GGGCGGTGGTGTCGGTCTTCGGGTCGGGCCTGGAGCTCCTGTGGAAGGCC ATGCAGGAGAGCGCGCCGGTCGCGCCGGACGTCGCCGACGCCGCCTTATG CGCGCTAGCGGACCTCCTGGCGGCGCCCACCGCCGGCCAGCGACACTTCG GCAGCTTCAGCAGCTTCGGCAGCGGCGACAACGGCGGCCTCAGCGCGGCG TCCACGGGCTTCCAGCGCGAGGAGCAGCTGACGTTCCTGCTGGACATGTG CGTGGAGAATGTGGCGCGCGGCATCAGCGTGGTGCTGACGCTACGGCTGG TGCAACGGTTGGCAGACGGCCAGCCCGACACCATGGGCGGCCGCGGTGCC GGCGGCGGCGTCGGCGGCACTGCCTGGCCGCGGGGCGGGATTCTGCGGGA CCGGCTGCTGATGGACCTCGAGAGAGAGAGCGGCATCTTGCAGGTGCGTT GCCGGTTTGTGAGAGGAAGGAGGGAAGCGACGTGACGTAATGGTGTTTGC TTATCCTCGACTGGCAAACAACGAGGTGGGACGCCGCGAATATGCCTGGT CCCCACATGGACATCTTTGGCCTTAAATTGCTTGGTCCTTCGATTGGTTG TTACTAAAACTCGCCTTTATGCCACCGCGTCCTTTCCACCCTGCCCTTTT TTTCCGACGGCCGCACTTCGCAGCTGACCGTCTCGGGTCTGGTGGCGTAC CGAAAGGATGCCGCGCGCGCGCTCAACAGCCTCGCCACGGACCCTGCGGA CGCGGAAGCCGCGGCCGCCGCCGCTGGCCTGCCGGCCTCCGACGCCCTGA TGGGGGCGACGCTGGCAGGGCGTTTTCCGCACGGGGAAGCCATGCAGGCA CAGCTGGACTTCCTGCGGTTCGTGGGAGAGCACAGCCCCGCGCAGCTGAC GTTTAGGCACTTTGCGCAGCTGTGGCGGTCATTCTTCGTCGCGGAGCCCG GCCCGCTGTGCGCCGCCGAATCAGAGGTGGGTTGGCGATATATGTAATTG GTTCCCTGCCGTCGTTTTAACCTCGGTTGGCTTGCATTGGTGGCGTTTCT TTAAATGCTATTGATGATGCCGTTTCTGCCGTCAAAGCAGTCGCAGTGGT GGGTCAACTCGCGAATCCTCTTTTGTTTACACCGTCCAACGAATCTGCCC ATCACGATTTGGGCTCTGCTGCCGCAACAGATGTTCTTTCGGTGGCTGCG GCGGCTGGCCCCGGAGATGAACAGCACGTACGGCCGCCAGAGCACCTACA TGGTCACCAGCGAGGAGACCGCCGCCCAGGTCTTCTCCCGCCTGCTCTGC AGCGGCGACGGTCCCTCCGTCAATGCCGTCACCGCCGACGCCGTCGCGGC CCCGGCAGGCCAACCTAACGAACTGCATGCAGACGACGGTGTCGGCGCCA GCGGCAGCGGCGCCGGAGGAAGCGGCGGCAGCAGCGGCGCGGTCGCAAAC AGCGGCGGCCTTGTCGTCGCCGTAAGCGGCAGCGGCGGCGGCCTGTTTGC AAACATGGGCGACGAGGGTTACGGATGTTTGGAGTGGTTCTTCCGGTTCG CGAACTGGCGCACGGCGTGCATCGGGAGCCCCGAGCACAAGCTCTACATG TCGGTGCAGAACTTCGACGGGCTGCGGGGCGTCGACTTGCTCTGGCAGGT GCGTGGGTTCGGTTGGTGACAGCGGCCAGCTCTTGCTTGGGCACGTCCTA TACAGGTCAGATTGTGCGCCGGCTTTGCTTGTTTTGGTCCGTTTCCACGC GACTTTTGTACGTTGCTTCCTCACAGATTTTACTGCTTCAGCAAGCTTAA CCATTGTTTTTCGTTTACGCGTCTTCCATTCCCTTATCGCGTGCTATGAT CCTACCCGGATCCGGCAGGTACTGTGGCAGACGCAGTCGGAGCGCGTGGT GCAGGCGGCGATGGACTTCCTGGTTGTTCTGCACTGCCGCCTCCGGGAGG GCCTCGACCGCCGTGCCGCCTGGCTGCGCTTCGTCGCCCGGTGCATGGCT GTCATTTCCACGCACGCCGCGCCAGCCAACGCTGCAGCGGCGGCGGTGGC AGTGGCGGCGGCACCACAGGCTGCCCGCGCCGCGCTTGCCGGGGCGGCAG CGGCGCCAGCGGAGGAGCTCCTCGTGAGGGCTACAGCATTGCTGTCGCGA CTGCTGGATGCCGTGGGCGCGGGTGATGCGCCTCCGCCATTGCAGCCAGA CAAGGTGAGGCGTGCATGTGCTGACCGTGGCATATGTAGAATGGGGTCGC TGCCTTTTGTAGGCCCGATACAAAGCGTTTCCATTTACTTTTAGATGATA ACCGAGTTTTCTCCTTCCATTGCTCCTAGCGCACTCAACGATTGCCCGTC CATGCGCCGCTTCCTGCGCAGGATCTGTCCTTGTGGGCAGTGGTTGGCGC CGGAGGAGACGGCGGCGGCGCCCTGTCGCCATCGCCGCCACCGACTGTCA CGGCAGAGGTGGAGGCGGCAGCCGCGCAGATTGGCGTCTGGTACACGGGC CGGGGGCGGTCGCGGCCGCACGAGCTGCTCTGCGATACGGACCATTACTT CGAGCTAGTCTTCCGGGTTCTGGAACAACCCCACGACTGGCCCGCCGCCC GCGCGGGTGCCTGGGGGCTCCTGGTGCGGCTGCCGGACAACCCGCGGGTC CGGGCGGAACTGGAGAGTCTGGGTGGACGGGTGAGCGCCGTCGCCGCCGC CGCTTGCGTGTCCGGCTCTGAGGCTGGTGCTGGCCGCGGGGGTGGGGGCG ATGCCGGCGAAAGCGGCGGCAGCGGCGGCAGCTCGGGAAGTGGCACGCCT GCGTCTGACAGCGACGATGGCGGCCTGGACGATGAGAACGCCGCGGCGGC AATCAGCACCGGGGCTGGTTTCGCCGGGAGCGGCAGCCGTGGTGGCGGCG GCGGCGGCAGCAATGGCGGCAGCGGCAATGACGGCAGCGGCGGGGGGGAA GTTGGTGGAGTGAAGGCCGAAGCGCCGGTAGTGCCGTGGGAGCAGCTGCT GCCGGGCAACTCGGCGGCCCGGCTGCTGTACCGCCTGAAAATGCTCGAAC CGCTGCTAGACGAGCCATCGGCGGAGCCGCTTCGGGTCCTGGATACATGT ATCATGGGTCCACAAGATCCCTTCGTGGCGGTGGCAGAGTCAGGTCATCG CGACGCCAAGTCGGTAGCGGCCGCGGCGGCTGCGGCTTCGGCTGCGGCGG CGGCGGGCGCCGACCAGTTGCGCACGGTGTTCGTGCACGGCGGCGGGCTG CAGCGCCTCTTGCAGCTGCTGGCCGCTGATGGGCCGCCGCAGTCCGACTT CGCAGCTCATCCGCTACGCGCGCTGTGCGCCGCCGCGCTGCTGCGGACAG TGCGCAACCTGCTGGCGCCGGCCGACGGCGGCGTTGGCAGCGGCGCCAGA GTGGCGACGACCGAGATCATGGACAGCTCAGAGGAAGAAGACGACGATGG TGCCGGCGCCATCGTCGACGCCGTCACGCTGCCGGAGGACGCGCTGGACA TTCTTTCGGACGCGGCGCTGTACCCCGGCAGGATTCCGGTGGTGGAGGGT GTCGCCATGGCAGCCTTGGTTGCCGGGACGGAAGTGGCCGAGGACGCCAG CAGGGGCGGGTGCACGAGCGCCGCCGCCGCCGCGGCGGCGGGGGCGGCGG CGGCGCGGCCGATGCCCGAACAGCTTCGGGAGTGGTGCCCGTCAGTGGAC TGGGCTCAGCTGGTGGAGAAGATCCTGGAGCTGATGCACGCCGTCGCCGA GTCCTCCGCAGGCTGCGGCAGCGGCGGCCACGGTGGCGCCGCTGGGGGGG AAGCTGCTGTGTGGGCTGTTCTGGCCGGGGACGCCGCCGACATGTCAACT GTGGCGGCGGCGGCGTTCCCGGCGGCGGCGGAGCTGATGCGGCATAGCAC GGCGCTACTGACGGCGCTGACGACGCTCTGGCCGCCGCTGCTCGACGCCG TGCTGCAGTTCCCGTCGCTGCCGGCTTGCCTCGAGTTCGGGCTGGTGCGG ACGCCCGAGGCGGCGGTGCGGCGGGAGGTGGCGGCCGGCGTGTTGCGGAT GGCGACAGAGCTCGGCGGCGAGGCGGAGCGCCGCCGCGCCGCGCGTCTCT TCGCAGAGACGCTGCTGGCAGCGCTGCCGTCGCCGGGCGACGACGATGCC GGTGGAAGCAGCGACGCCGTCAGCAGTGGCGGTTCCAGCGGCGGCGGCGG CGGCGGCGTTTCCTACTGTGGAGAATACTTTGGGCTGCTGGCTGAGCTGG TACGGCTTCCGGGCGGCATCCCGGAGGACACGACGGGACTCTGCCTGGAG CTGGCGGCGTTTCTGGCGCGGCGTCCCGTCATGGAAACGTCAGAGGACGA GTGCGATCCGGCGCTCGGCGGGTGAGTCCCGGTGGCGGACAGTTATATTG CTGCTTTCACGTCTTTGCGGTCGTGGTTGATGCATTTTTTGCATTATGCA TTTTCGGGCGGCGGCCCCCTCGCCATTTTCGCCCGCTTCAGGTACCGGGT AGCCACCACAAACCTTCCATTTTCTTTGCATATCCTGCAGATGCATGCTT CTTCTGCACACGGTCTTGACCGCCCTCCCATCTGGCCAACGCTCAAACGT CAAGCTGGCGCTGGGCACCGCCGGCCTGCCACGGGAGCTCTTTGACCGCT GCCTATTTGCTCCGCCGCCCTTACCGCTCTCGGGCGGCGGCGACGCACCG GGCGCGAAAACGGGAAGAAGCGGAAGCAGCGGCTGCTGCAGCGGCGGCGC TGGAGAAGCGGCGATGGCGGCGGAGGCGGCGGCAGCGGCAGCTGGGCGAC CGCGCCCGCCAAAGTGCAAGCACGCGGAGAGCCGGCGTTTGGCGTTCCTG CTGCTGCAGGAGGCGATTGATGACTGCCTGGGCAACCTGGCCTGCGTCCT CGCGCTGGCGCTGCCCCATCACCACCTGGGCCTCACTCTGGAGGAGCAGG AGCGACGCCGGGCGCGGGAGGTACGGCGGACGTCGCACCACAACCTCCTG GGGCCGGCGCCAGGGGCGATGGCACTGGCAGCGGCGGCGGCCACCCACGG CACGACCCATGGCAGCAGCTGGGCCGGCATGAACGGCGCTGCGGCAGGAG ACGGGTCAGCGTCGCTGCTGCACGTATCGTCGTTCGGCGTGCAGCCGAAG CACATGTCCAAGCACCCGAGCGGGTACATCGGCCTCAAGAACCCCGGCTG CATCTGTTACATGAACAGCACCATGCAGCAGCTCTTTATGATTCCAGGCT TTCGCAGCGACGTCCTCGCTTTTGGCGGCCCCGCCGGCGCCGTAGGTTAC AGCGGCGCGAGCGGCGCTGCCATTGAATCCAGTGCCGGCGGACGCGGACA TGACAGCGTCGGGACCGCCGCATCGGGGGCTTCAGAGGCGGCCCTTGCAC GGGCATCATCGTCCACCGCCGGAGCTTTAGCAGGCGAAAGCGGCGAAAGC GGCGGCGGCGGCGGCGGCGACGACGATGGGCATGCATCGCTGATGTGGCA GCTGCAGCGCATGTTCGGACACCTGCAGGAGTCCGACAAGGCGCACTTCA GCCCGCGCGGGTTCTGCGAGGCGCTCCGTGGCTGGGACGGAGCCGCCACG GATGTCAACGTCCAGCAGGACGCCTCGGAGTTCCTCGCACTACTTTTCCA GCGGCTCGAAGCGTCCGTCCAGGGTACGGTCGGTGAGGACATGCTCCGGC GGTCGTTCGGCGGCGTCCTTAACCACGTCCTGGCGGCAGACGCTGGCGGC GGCGGCTCTGGTGGCGGCGGCGGTGGCAGGGGAGGGCAGCGGCTGCGGTC AGAGCGGGCGGAGCCGTTTACGTTCGTGTCGGTCAAGGTGAAGGACATGC ACAGCCTGGAGAAGTCGCTCGAGCTGTATGTGCGCGGCGAGACGGTGGAG TACGCGTGGGAGGAGCCGGCGAAGGCGGCGACTGCGGCCACTGGTGCATC GGCAGACAGTGGCGGCGGAGATGGGAAAGCGGCCGCGGCGGGAGGGACGA CGCGGCTGTCGCTGCCGACGTGCAAGCGCGTATCGTTCGCGGCGCTGCCG CGGCATCTGCTGCTGCACCTCCAGCGCTTCGAGTTTGACTTCCACACCAT GCAGCAAAACAAGGTGAGTATGGGGTGGTTTTTTGCGGCCTTTTGTGGGC GCCCGTCGCAACAGAAAACGGCTTCCATCTTACCTTACACTGCTGCTCAC GCCATGGTGCCGGCTTCCGAACTGAATCCGATTACAGGTAAACGACCGCT TCCAGTTTCCCACGACGCTGGACATGTTCCCCTACACTGAAGAAGGCCTC GCCCAGCAGGCAGCAGCCGACGGCGCCAACGTCGACGCTTCCGGCGATTC CGCCGCTGCCGGCGCTGACGATGCCGGAGCGGCGGCAGCGACCATCGCGA TGACGGCAGCGCCGGCGACGCGGGCGGCGGGCGGAGAGGACGGCATACCG GAGCGACTGCGGCGTGAGGACTGCCTCTACCAACTGGCGGGCGTGGTGGT GCACATGGGCACTGCCAACAACGGCCATTACTACAGCTACTGCCGCGAGC GGGGCGGCGCCCGCCGCTGGTTCGAGTTCAATGACTCGGTAGTCGCCGCC TTCGACCCGTCGAATCTCGAAGCCGAGTGCTTCGGCGGGCTCGACGCGGA CGGTGGGCCGGCGGCGGCGGCGTCGGCGGCGGCGGCGGCGCACCACCTGC TAGGGAACCGCGGCGGCGCCCACTGCGGTGGCGGCGGCGCCCACGGCGGC TATGGCAGCCAGTACGAGCACTGGCGATCGTCGTCGATGCACGGCGGGGG TTACGGCGCTGAGGTGAGCGGGGCAGGCGGCCACCATCACCGCCTGCCCG TGCGCGCGCTGAAGTGGGGCGGCGCCCGCGCGCGAAATGCATTTCTGCTC GTTTACGACCGGGTGGATGGCGGCGATGGCAGCGGCAACAGCGGCGGTGG CCGAGTCGGAGCTGTATCGCCGCCGGTGCTGGGGGCGCGGGTGCCGGATC CGATCTGTCGGGAGATCCGGCTGGAAAACCTCGAGTTCTTCCGGAAGCGC TGGGTCTTCGAGCCAGGCTACTACGATTTTTTGGAAGGTCTTCTGGCGGA GAGCGTCGCCGCGGCGCAGCAGGCGGTGGAGCCAGCGAAGCTACTCCCGG CAGAACAGCCGGCCAATGGTGCCGACGATGATGGCAGCGGCGGCGGCGGC GGCGGCGACGGCGTTTCGTCTGAGGCGGTTGCGGCGGCGGCGGCGGCGGC TGCGGCGGCGAGGGAAGCGCTGATCGCTGATGCGGTGCAACTGGGGGCCC AGTTCGCGCTGGGCACGCTGGTGCAGGCGCGGGAGAGCGCCCTCGTGGCG GCGGCGGGCCGGCGGCTGCTGCAGCTGCTGGAGCTGCGCCCGCGGCGGTG CGACAGGCTGCTGACGGCGCTGGCGGCTGACCCAGCGACGGTACGTGACG TGCTGCTGGAAGGTAGCGAA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig211:1616..10835+

>mRNA_P-wetherbeei_contig211.1.8 ID=mRNA_P-wetherbeei_contig211.1.8|Name=mRNA_P-wetherbeei_contig211.1.8|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=7767bp|location=Sequence derived from alignment at P-wetherbeei_contig211:1616..10835+ (Phaeothamnion wetherbeei SAG_119_79)
GCGGCGCTAGGGCCATCGCCTCTCTTCGTCGCAAATGTGGAGCACTTTGG
CCGGTCTGGCGGTTTTGCTGCCCTGCTCGTGCGCATCGATCCCGACCGCT
GGTCCGCCGATAGTGCCCGCATTAGGTTTGGCGGCGGCGGTTCCGGCGCC
GGCCGGGGGGATGGAAATCCCGTGTCGATCGCGGAGCTGGCTGCGCTGTT
GTCCTTCCTGCGGAACGTGGCACCGGTGCTGGCGCGCGACTTCGCTGAGT
CGTTTGGCACGCGGCTGCGGGACGCGGCCTTTTCACGGCTGGGACGCCTC
GCCGACGACGAGCTGAAGCAGCTAGAGGACATGGCGAGCGGTGGCTGCAG
GGAGGGGACGCTGCTGGATGCGCTCCAGCAGCTGGAGAGGCTGCTGCCGC
TGCTTCTGCGGGCGCACGACGCCGATGCCGCCGCCGAGGGCTACCAGCTG
TCGCTGGCGCTGCAGCTGCTACGGCGGCCCTCCTTCAGTATGCGCGCCCG
CGGCGTCGCCATCCTCTCGGAGGCCGTCGACGTCGCCGCGCGCGCCGCTG
CCGCCGCGTCGTCCACTGCTGCCTACTTTCGGGGAAATAGCGGCGGCGGC
GTGAACGCAAGTAATAGTAGCGGCGGCGCATATAGTAATAGTGGCGACAA
CGGCGGTGCGGCGACGAAGGGAAACGGCTGGGTGGGGCCCGGGCTGCGAT
GGTCGGATGGCGCGGCGCTGGCAGAGTGGCTGGAAGTGAATGAAGTGCTC
CACGTCTTGCTGGGAAGCAATCCGCCGGATAGAAGTGTGCAGCAGCAAAA
GCCAATGCCACCGCCGGGATCACCGTTCGTGTCGCCGGCGCTCCCACCAC
CGGGATCGCCAACTGCGGCATTGGTGACGGCAGCTGAGGCGGCGACTGTC
GTGGCGGCAACATCGATTTCGTCTGCGGCACCATTACCGCCACCATCGCC
GTCGCCGCCGCAAACGCCGCCGTCCATGTCCATGCCCATGCAGCCGGAGG
TCCTGAAGCGATGCGAGGGGCTCTTTTGCTTCATGGCGGGCCGTGGCCTC
TTCCGGCGCTGCCATCTCGACGCCCTGTGGCGCGCTGCCGGCGGGCCAAT
GACGGCGGCAACAGGTAAGGTGGCGGTGGCGGCGGTGAATGGAGCGGCAG
CAGCCGGAGCAACGACACCAGATGCGGCGGCGGCAGCGGGGCCGATGCCA
GGAGCAGTGGCGGCTGCGGCAATGTCGTCGCCGCACGCGCCGATCGTCTA
CCGGCTGATCGCGCAGCTTGTGCCGCACCTCGACGCGGCGGGCATCACCG
CCGTCTACGAGAAGCTGCGCACGCTGTCGCCTGGCTACACCATGGCGCAA
GTCGAACTCATCAAGGCCTTTGTCGCCGGCGCGGCGGCGGCGGCCACGGC
GGCAGCGCGGACGGCGGCCACGCCTGCGACTGCGCAACCGGGATCTCCCG
CGAACGTACGCGCCGCTTCTCCGCCGAATGCCGGAGCTAACAATGGGCGG
GTCACGGCGGCGGCGGCGGGAGGGACGGCGGGGGCGGTGGTGTCGGTCTT
CGGGTCGGGCCTGGAGCTCCTGTGGAAGGCCATGCAGGAGAGCGCGCCGG
TCGCGCCGGACGTCGCCGACGCCGCCTTATGCGCGCTAGCGGACCTCCTG
GCGGCGCCCACCGCCGGCCAGCGACACTTCGGCAGCTTCAGCAGCTTCGG
CAGCGGCGACAACGGCGGCCTCAGCGCGGCGTCCACGGGCTTCCAGCGCG
AGGAGCAGCTGACGTTCCTGCTGGACATGTGCGTGGAGAATGTGGCGCGC
GGCATCAGCGTGGTGCTGACGCTACGGCTGGTGCAACGGTTGGCAGACGG
CCAGCCCGACACCATGGGCGGCCGCGGTGCCGGCGGCGGCGTCGGCGGCA
CTGCCTGGCCGCGGGGCGGGATTCTGCGGGACCGGCTGCTGATGGACCTC
GAGAGAGAGAGCGGCATCTTGCAGCTGACCGTCTCGGGTCTGGTGGCGTA
CCGAAAGGATGCCGCGCGCGCGCTCAACAGCCTCGCCACGGACCCTGCGG
ACGCGGAAGCCGCGGCCGCCGCCGCTGGCCTGCCGGCCTCCGACGCCCTG
ATGGGGGCGACGCTGGCAGGGCGTTTTCCGCACGGGGAAGCCATGCAGGC
ACAGCTGGACTTCCTGCGGTTCGTGGGAGAGCACAGCCCCGCGCAGCTGA
CGTTTAGGCACTTTGCGCAGCTGTGGCGGTCATTCTTCGTCGCGGAGCCC
GGCCCGCTGTGCGCCGCCGAATCAGAGATGTTCTTTCGGTGGCTGCGGCG
GCTGGCCCCGGAGATGAACAGCACGTACGGCCGCCAGAGCACCTACATGG
TCACCAGCGAGGAGACCGCCGCCCAGGTCTTCTCCCGCCTGCTCTGCAGC
GGCGACGGTCCCTCCGTCAATGCCGTCACCGCCGACGCCGTCGCGGCCCC
GGCAGGCCAACCTAACGAACTGCATGCAGACGACGGTGTCGGCGCCAGCG
GCAGCGGCGCCGGAGGAAGCGGCGGCAGCAGCGGCGCGGTCGCAAACAGC
GGCGGCCTTGTCGTCGCCGTAAGCGGCAGCGGCGGCGGCCTGTTTGCAAA
CATGGGCGACGAGGGTTACGGATGTTTGGAGTGGTTCTTCCGGTTCGCGA
ACTGGCGCACGGCGTGCATCGGGAGCCCCGAGCACAAGCTCTACATGTCG
GTGCAGAACTTCGACGGGCTGCGGGGCGTCGACTTGCTCTGGCAGGTACT
GTGGCAGACGCAGTCGGAGCGCGTGGTGCAGGCGGCGATGGACTTCCTGG
TTGTTCTGCACTGCCGCCTCCGGGAGGGCCTCGACCGCCGTGCCGCCTGG
CTGCGCTTCGTCGCCCGGTGCATGGCTGTCATTTCCACGCACGCCGCGCC
AGCCAACGCTGCAGCGGCGGCGGTGGCAGTGGCGGCGGCACCACAGGCTG
CCCGCGCCGCGCTTGCCGGGGCGGCAGCGGCGCCAGCGGAGGAGCTCCTC
GTGAGGGCTACAGCATTGCTGTCGCGACTGCTGGATGCCGTGGGCGCGGG
TGATGCGCCTCCGCCATTGCAGCCAGACAAGGATCTGTCCTTGTGGGCAG
TGGTTGGCGCCGGAGGAGACGGCGGCGGCGCCCTGTCGCCATCGCCGCCA
CCGACTGTCACGGCAGAGGTGGAGGCGGCAGCCGCGCAGATTGGCGTCTG
GTACACGGGCCGGGGGCGGTCGCGGCCGCACGAGCTGCTCTGCGATACGG
ACCATTACTTCGAGCTAGTCTTCCGGGTTCTGGAACAACCCCACGACTGG
CCCGCCGCCCGCGCGGGTGCCTGGGGGCTCCTGGTGCGGCTGCCGGACAA
CCCGCGGGTCCGGGCGGAACTGGAGAGTCTGGGTGGACGGGTGAGCGCCG
TCGCCGCCGCCGCTTGCGTGTCCGGCTCTGAGGCTGGTGCTGGCCGCGGG
GGTGGGGGCGATGCCGGCGAAAGCGGCGGCAGCGGCGGCAGCTCGGGAAG
TGGCACGCCTGCGTCTGACAGCGACGATGGCGGCCTGGACGATGAGAACG
CCGCGGCGGCAATCAGCACCGGGGCTGGTTTCGCCGGGAGCGGCAGCCGT
GGTGGCGGCGGCGGCGGCAGCAATGGCGGCAGCGGCAATGACGGCAGCGG
CGGGGGGGAAGTTGGTGGAGTGAAGGCCGAAGCGCCGGTAGTGCCGTGGG
AGCAGCTGCTGCCGGGCAACTCGGCGGCCCGGCTGCTGTACCGCCTGAAA
ATGCTCGAACCGCTGCTAGACGAGCCATCGGCGGAGCCGCTTCGGGTCCT
GGATACATGTATCATGGGTCCACAAGATCCCTTCGTGGCGGTGGCAGAGT
CAGGTCATCGCGACGCCAAGTCGGTAGCGGCCGCGGCGGCTGCGGCTTCG
GCTGCGGCGGCGGCGGGCGCCGACCAGTTGCGCACGGTGTTCGTGCACGG
CGGCGGGCTGCAGCGCCTCTTGCAGCTGCTGGCCGCTGATGGGCCGCCGC
AGTCCGACTTCGCAGCTCATCCGCTACGCGCGCTGTGCGCCGCCGCGCTG
CTGCGGACAGTGCGCAACCTGCTGGCGCCGGCCGACGGCGGCGTTGGCAG
CGGCGCCAGAGTGGCGACGACCGAGATCATGGACAGCTCAGAGGAAGAAG
ACGACGATGGTGCCGGCGCCATCGTCGACGCCGTCACGCTGCCGGAGGAC
GCGCTGGACATTCTTTCGGACGCGGCGCTGTACCCCGGCAGGATTCCGGT
GGTGGAGGGTGTCGCCATGGCAGCCTTGGTTGCCGGGACGGAAGTGGCCG
AGGACGCCAGCAGGGGCGGGTGCACGAGCGCCGCCGCCGCCGCGGCGGCG
GGGGCGGCGGCGGCGCGGCCGATGCCCGAACAGCTTCGGGAGTGGTGCCC
GTCAGTGGACTGGGCTCAGCTGGTGGAGAAGATCCTGGAGCTGATGCACG
CCGTCGCCGAGTCCTCCGCAGGCTGCGGCAGCGGCGGCCACGGTGGCGCC
GCTGGGGGGGAAGCTGCTGTGTGGGCTGTTCTGGCCGGGGACGCCGCCGA
CATGTCAACTGTGGCGGCGGCGGCGTTCCCGGCGGCGGCGGAGCTGATGC
GGCATAGCACGGCGCTACTGACGGCGCTGACGACGCTCTGGCCGCCGCTG
CTCGACGCCGTGCTGCAGTTCCCGTCGCTGCCGGCTTGCCTCGAGTTCGG
GCTGGTGCGGACGCCCGAGGCGGCGGTGCGGCGGGAGGTGGCGGCCGGCG
TGTTGCGGATGGCGACAGAGCTCGGCGGCGAGGCGGAGCGCCGCCGCGCC
GCGCGTCTCTTCGCAGAGACGCTGCTGGCAGCGCTGCCGTCGCCGGGCGA
CGACGATGCCGGTGGAAGCAGCGACGCCGTCAGCAGTGGCGGTTCCAGCG
GCGGCGGCGGCGGCGGCGTTTCCTACTGTGGAGAATACTTTGGGCTGCTG
GCTGAGCTGGTACGGCTTCCGGGCGGCATCCCGGAGGACACGACGGGACT
CTGCCTGGAGCTGGCGGCGTTTCTGGCGCGGCGTCCCGTCATGGAAACGT
CAGAGGACGAGTGCGATCCGGCGCTCGGCGGATGCATGCTTCTTCTGCAC
ACGGTCTTGACCGCCCTCCCATCTGGCCAACGCTCAAACGTCAAGCTGGC
GCTGGGCACCGCCGGCCTGCCACGGGAGCTCTTTGACCGCTGCCTATTTG
CTCCGCCGCCCTTACCGCTCTCGGGCGGCGGCGACGCACCGGGCGCGAAA
ACGGGAAGAAGCGGAAGCAGCGGCTGCTGCAGCGGCGGCGCTGGAGAAGC
GGCGATGGCGGCGGAGGCGGCGGCAGCGGCAGCTGGGCGACCGCGCCCGC
CAAAGTGCAAGCACGCGGAGAGCCGGCGTTTGGCGTTCCTGCTGCTGCAG
GAGGCGATTGATGACTGCCTGGGCAACCTGGCCTGCGTCCTCGCGCTGGC
GCTGCCCCATCACCACCTGGGCCTCACTCTGGAGGAGCAGGAGCGACGCC
GGGCGCGGGAGGTACGGCGGACGTCGCACCACAACCTCCTGGGGCCGGCG
CCAGGGGCGATGGCACTGGCAGCGGCGGCGGCCACCCACGGCACGACCCA
TGGCAGCAGCTGGGCCGGCATGAACGGCGCTGCGGCAGGAGACGGGTCAG
CGTCGCTGCTGCACGTATCGTCGTTCGGCGTGCAGCCGAAGCACATGTCC
AAGCACCCGAGCGGGTACATCGGCCTCAAGAACCCCGGCTGCATCTGTTA
CATGAACAGCACCATGCAGCAGCTCTTTATGATTCCAGGCTTTCGCAGCG
ACGTCCTCGCTTTTGGCGGCCCCGCCGGCGCCGTAGGTTACAGCGGCGCG
AGCGGCGCTGCCATTGAATCCAGTGCCGGCGGACGCGGACATGACAGCGT
CGGGACCGCCGCATCGGGGGCTTCAGAGGCGGCCCTTGCACGGGCATCAT
CGTCCACCGCCGGAGCTTTAGCAGGCGAAAGCGGCGAAAGCGGCGGCGGC
GGCGGCGGCGACGACGATGGGCATGCATCGCTGATGTGGCAGCTGCAGCG
CATGTTCGGACACCTGCAGGAGTCCGACAAGGCGCACTTCAGCCCGCGCG
GGTTCTGCGAGGCGCTCCGTGGCTGGGACGGAGCCGCCACGGATGTCAAC
GTCCAGCAGGACGCCTCGGAGTTCCTCGCACTACTTTTCCAGCGGCTCGA
AGCGTCCGTCCAGGGTACGGTCGGTGAGGACATGCTCCGGCGGTCGTTCG
GCGGCGTCCTTAACCACGTCCTGGCGGCAGACGCTGGCGGCGGCGGCTCT
GGTGGCGGCGGCGGTGGCAGGGGAGGGCAGCGGCTGCGGTCAGAGCGGGC
GGAGCCGTTTACGTTCGTGTCGGTCAAGGTGAAGGACATGCACAGCCTGG
AGAAGTCGCTCGAGCTGTATGTGCGCGGCGAGACGGTGGAGTACGCGTGG
GAGGAGCCGGCGAAGGCGGCGACTGCGGCCACTGGTGCATCGGCAGACAG
TGGCGGCGGAGATGGGAAAGCGGCCGCGGCGGGAGGGACGACGCGGCTGT
CGCTGCCGACGTGCAAGCGCGTATCGTTCGCGGCGCTGCCGCGGCATCTG
CTGCTGCACCTCCAGCGCTTCGAGTTTGACTTCCACACCATGCAGCAAAA
CAAGGTAAACGACCGCTTCCAGTTTCCCACGACGCTGGACATGTTCCCCT
ACACTGAAGAAGGCCTCGCCCAGCAGGCAGCAGCCGACGGCGCCAACGTC
GACGCTTCCGGCGATTCCGCCGCTGCCGGCGCTGACGATGCCGGAGCGGC
GGCAGCGACCATCGCGATGACGGCAGCGCCGGCGACGCGGGCGGCGGGCG
GAGAGGACGGCATACCGGAGCGACTGCGGCGTGAGGACTGCCTCTACCAA
CTGGCGGGCGTGGTGGTGCACATGGGCACTGCCAACAACGGCCATTACTA
CAGCTACTGCCGCGAGCGGGGCGGCGCCCGCCGCTGGTTCGAGTTCAATG
ACTCGGTAGTCGCCGCCTTCGACCCGTCGAATCTCGAAGCCGAGTGCTTC
GGCGGGCTCGACGCGGACGGTGGGCCGGCGGCGGCGGCGTCGGCGGCGGC
GGCGGCGCACCACCTGCTAGGGAACCGCGGCGGCGCCCACTGCGGTGGCG
GCGGCGCCCACGGCGGCTATGGCAGCCAGTACGAGCACTGGCGATCGTCG
TCGATGCACGGCGGGGGTTACGGCGCTGAGGTGAGCGGGGCAGGCGGCCA
CCATCACCGCCTGCCCGTGCGCGCGCTGAAGTGGGGCGGCGCCCGCGCGC
GAAATGCATTTCTGCTCGTTTACGACCGGGTGGATGGCGGCGATGGCAGC
GGCAACAGCGGCGGTGGCCGAGTCGGAGCTGTATCGCCGCCGGTGCTGGG
GGCGCGGGTGCCGGATCCGATCTGTCGGGAGATCCGGCTGGAAAACCTCG
AGTTCTTCCGGAAGCGCTGGGTCTTCGAGCCAGGCTACTACGATTTTTTG
GAAGGTCTTCTGGCGGAGAGCGCGGTTGCGGCGGCGGCGGCGGCGGCTGC
GGCGGCGAGGGAAGCGCTGATCGCTGATGCGGTGCAACTGGGGGCCCAGT
TCGCGCTGGGCACGCTGGTGCAGGCGCGGGAGAGCGCCCTCGTGGCGGCG
GCGGGCCGGCGGCTGCTGCAGCTGCTGGAGCTGCGCCCGCGGCGGTGCGA
CAGGCTGCTGACGGCGCTGGCGGCTGACCCAGCGACGGTACGTGACGTGC
TGCTGGAAGGTAGCGAA
back to top