mRNA_P-wetherbeei_contig2108.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig2108.1.1
Unique NamemRNA_P-wetherbeei_contig2108.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig2108.1.1 vs. uniprot
Match: D7FU34_ECTSI (AAA_31 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU34_ECTSI)

HSP 1 Score: 372 bits (956), Expect = 9.320e-126
Identity = 192/264 (72.73%), Postives = 223/264 (84.47%), Query Frame = 1
Query:    1 VIVVTSGKGGVGKTTTVSSLGWGLAARGHPTCVVDFDIGLRNLDIHLGAERRVIFDFVNVIQRECALGQALIQDRRNSRLHLLAASQTKDKEALTAEGVGRVIAELRERFAFILCDSPAGIESGARHAMYLADAAVIVTNPEVSSCRDSDKMVGFINSRSSRAERGEPPVQQTLLVTRYDADRAARDEMLSVADIQELLGLPLVGLIPECRSVLTATNEGTPVICAESD-AATAYDDAVARLLGEERPMRFAEPRPKGILERLF 789
            V+VVTSGKGGVGKTTT +SL +GLA  GH TCV+DFDIGLRN+D+HLG ERRVIFDFVNVIQ +C L QALIQDRRN  L LLAASQTKDKEALT EGV RVI EL++ F +++CDSPAGIESGARHAMYLAD AVIVTNPEVSSCRDSDKMVGFI S+S RAE G+ PV+QTLLVTRYD  RA  +EML++ADIQELLGL ++GLIPE ++VLTATN G PVI +E D AATAY DAV R LG+   ++F +P+P G+L+R+F
Sbjct:   72 VVVVTSGKGGVGKTTTAASLSYGLAQAGHRTCVIDFDIGLRNMDLHLGCERRVIFDFVNVIQEQCTLNQALIQDRRNPGLSLLAASQTKDKEALTQEGVTRVIRELQKSFDYVVCDSPAGIESGARHAMYLADEAVIVTNPEVSSCRDSDKMVGFIASKSRRAETGQAPVRQTLLVTRYDPARAESNEMLTLADIQELLGLEVLGLIPESKAVLTATNLGQPVIVSEGDDAATAYKDAVDRFLGKTVDLKFVQPKPAGLLKRMF 335          
BLAST of mRNA_P-wetherbeei_contig2108.1.1 vs. uniprot
Match: A0A4D9DHA4_9STRA (AAA_31 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DHA4_9STRA)

HSP 1 Score: 359 bits (921), Expect = 2.260e-121
Identity = 180/266 (67.67%), Postives = 216/266 (81.20%), Query Frame = 1
Query:    1 VIVVTSGKGGVGKTTTVSSLGWGLAARGHPTCVVDFDIGLRNLDIHLGAERRVIFDFVNVIQRECALGQALIQDRRNSRLHLLAASQTKDKEALTAEGVGRVIAELRERFAFILCDSPAGIESGARHAMYLADAAVIVTNPEVSSCRDSDKMVGFINSRSSRAERGEPPVQQTLLVTRYDADRAARDEMLSVADIQELLGLPLVGLIPECRSVLTATNEGTPVICA-ESDAATAYDDAVARLLGEERPMRFAEPRPKGILERLFQR 795
            V+ +TSGKGGVGKTTT +S+G GLA +G  TCV+DFDIGLRNLDIHLGAERRVIFDFV+V+Q +C L QA+I+D+RN  L LLAASQTKDK ALT + VG+++AE+R  F FI+CDSPAGIESGARHAMY AD A+IVTNPE+SSCRDSDKM+GFI+SRS RAE G+ PV+Q+LLVTRYD +RA ++E L + DI+ELLGL L+G+IPE + +LTATN G PVIC  + DA  AY D V R LGEE+  RF  PRP GIL  LF R
Sbjct:   10 VVCITSGKGGVGKTTTAASIGMGLALKGKKTCVIDFDIGLRNLDIHLGAERRVIFDFVHVLQGDCTLKQAMIKDKRNPNLFLLAASQTKDKNALTVDAVGKMLAEMRREFDFIICDSPAGIESGARHAMYFADDAIIVTNPELSSCRDSDKMIGFISSRSKRAELGQEPVRQSLLVTRYDPERAQKEECLRLEDIKELLGLELLGVIPESKCILTATNLGQPVICMPDQDAGQAYMDTVERFLGEEKEFRFLSPRPTGILSMLFSR 275          
BLAST of mRNA_P-wetherbeei_contig2108.1.1 vs. uniprot
Match: A0A8K1CKX9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKX9_PYTOL)

HSP 1 Score: 355 bits (912), Expect = 2.390e-119
Identity = 175/267 (65.54%), Postives = 225/267 (84.27%), Query Frame = 1
Query:    1 VIVVTSGKGGVGKTTTVSSLGWGLAARGHPTCVVDFDIGLRNLDIHLGAERRVIFDFVNVIQRECALGQALIQDRRNSRLHLLAASQTKDKEALTAEGVGRVIAELRERFAFILCDSPAGIESGARHAMYLADAAVIVTNPEVSSCRDSDKMVGFINSRSSRAERGEPPVQQTLLVTRYDADRAARDEMLSVADIQELLGLPLVGLIPECRSVLTATNEGTPVICAESD-AATAYDDAVARLLGEERPMRFAEP-RPKGILERLFQR 795
            V+V+TSGKGGVGKTT  +S+G+GLA +G+ TC++DFDIGLRNLD+HLG ERRVIFDF++VI++ C LGQALI+D+R   L LLAASQT+DK+ALT +GV +V+ EL+++F FILCDSPAGIE+GARHAMY AD A++VTNPE+SSCRDSDKM+GFI S+S RA+ G  PV Q LL+ RYDA+R   D+ LSV DI+E+LGLP+VG+IPE + VLT++N G PVI A +D AATA++DAVAR LG+ RPM+F EP +PKG+ +R+FQR
Sbjct:   55 VVVITSGKGGVGKTTVTASIGYGLAMQGYRTCLIDFDIGLRNLDLHLGCERRVIFDFIHVIEKNCRLGQALIKDKRLDNLSLLAASQTRDKDALTEDGVEQVLDELKQQFDFILCDSPAGIENGARHAMYFADDAILVTNPEISSCRDSDKMIGFIASKSLRAQEGREPVNQQLLINRYDANRVQSDDCLSVEDIEEMLGLPVVGVIPESQHVLTSSNMGQPVISAGNDKAATAFEDAVARFLGDVRPMQFLEPDKPKGLFDRIFQR 321          
BLAST of mRNA_P-wetherbeei_contig2108.1.1 vs. uniprot
Match: G4Z8F7_PHYSP (Putative septum site-determining protein MinD n=17 Tax=Peronosporaceae TaxID=4777 RepID=G4Z8F7_PHYSP)

HSP 1 Score: 353 bits (907), Expect = 3.470e-119
Identity = 178/265 (67.17%), Postives = 218/265 (82.26%), Query Frame = 1
Query:    1 VIVVTSGKGGVGKTTTVSSLGWGLAARGHPTCVVDFDIGLRNLDIHLGAERRVIFDFVNVIQRECALGQALIQDRRNSRLHLLAASQTKDKEALTAEGVGRVIAELRERFAFILCDSPAGIESGARHAMYLADAAVIVTNPEVSSCRDSDKMVGFINSRSSRAERGEPPVQQTLLVTRYDADRAARDEMLSVADIQELLGLPLVGLIPECRSVLTATNEGTPVICAESD-AATAYDDAVARLLGEERPMRFAEP-RPKGILERLF 789
            V+V+TSGKGGVGKTT  +S+G+GLA RG  TC++DFDIGLRNLD+HLG ERRVIFDF++VI++ C LGQALI+D+R  +L LLAASQT+DKEALT EGV +V+ ELR +F FILCDSPAGIESGARHAMY AD A++VTNPE+SSCRDSDKM+GFI S+S RA+ G  PVQQ LLV RYDA+R   D+ LSV DI+E+LGLP+ G+IPE   VLT++N G PVI AE + AA A++DAVAR LGEER M+F +P  PKG+  R+F
Sbjct:   16 VVVITSGKGGVGKTTVTASMGYGLAQRGFRTCLIDFDIGLRNLDLHLGCERRVIFDFIHVIEKNCRLGQALIRDKRLDKLSLLAASQTRDKEALTEEGVEQVLDELRTQFDFILCDSPAGIESGARHAMYFADDAILVTNPEISSCRDSDKMIGFIASKSLRAKEGRAPVQQRLLVNRYDANRVKNDDCLSVDDIEEMLGLPVCGVIPESAHVLTSSNMGQPVITAEGENAAVAFEDAVARFLGEEREMKFLQPDEPKGLFSRIF 280          
BLAST of mRNA_P-wetherbeei_contig2108.1.1 vs. uniprot
Match: K3WC66_GLOUD (Site-determining protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WC66_GLOUD)

HSP 1 Score: 352 bits (904), Expect = 3.080e-118
Identity = 177/267 (66.29%), Postives = 219/267 (82.02%), Query Frame = 1
Query:    1 VIVVTSGKGGVGKTTTVSSLGWGLAARGHPTCVVDFDIGLRNLDIHLGAERRVIFDFVNVIQRECALGQALIQDRRNSRLHLLAASQTKDKEALTAEGVGRVIAELRERFAFILCDSPAGIESGARHAMYLADAAVIVTNPEVSSCRDSDKMVGFINSRSSRAERGEPPVQQTLLVTRYDADRAARDEMLSVADIQELLGLPLVGLIPECRSVLTATNEGTPVICAESD-AATAYDDAVARLLGEERPMRFAEP-RPKGILERLFQR 795
            V+VVTSGKGGVGKTT  +SLG+GLA+RG+ TC++DFDIGLRNLD+HLG ERRVIFDF++VI++ C L QALI+D+R   L LLAASQT+DKEALT +GV  V+ EL++ + FILCDSPAGIESGARHAMY AD A++VTNPE+SSCRDSDKM+GFI S+S RA+    PV Q LL+ RYDA+R   D+ LSV DI+E+LGLP+VG++PE   VLT++N G PVI A  + AATA+DDAVAR LGE+R M+F EP +PKG L+RLF R
Sbjct:   48 VVVVTSGKGGVGKTTVTASLGYGLASRGYRTCLIDFDIGLRNLDLHLGCERRVIFDFIHVIEKNCRLNQALIKDKRLDNLSLLAASQTRDKEALTEDGVEEVLDELKKEYDFILCDSPAGIESGARHAMYFADDAILVTNPEISSCRDSDKMIGFIASKSLRAQENRAPVNQRLLINRYDANRVKNDDCLSVEDIEEMLGLPVVGVVPESTHVLTSSNMGQPVITAVGEKAATAFDDAVARFLGEQREMKFLEPDQPKGFLDRLFSR 314          
BLAST of mRNA_P-wetherbeei_contig2108.1.1 vs. uniprot
Match: A0A6A3JCG4_9STRA (Putative septum site-determining protein MinD n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3JCG4_9STRA)

HSP 1 Score: 352 bits (902), Expect = 3.460e-118
Identity = 178/265 (67.17%), Postives = 217/265 (81.89%), Query Frame = 1
Query:    1 VIVVTSGKGGVGKTTTVSSLGWGLAARGHPTCVVDFDIGLRNLDIHLGAERRVIFDFVNVIQRECALGQALIQDRRNSRLHLLAASQTKDKEALTAEGVGRVIAELRERFAFILCDSPAGIESGARHAMYLADAAVIVTNPEVSSCRDSDKMVGFINSRSSRAERGEPPVQQTLLVTRYDADRAARDEMLSVADIQELLGLPLVGLIPECRSVLTATNEGTPVICAESD-AATAYDDAVARLLGEERPMRFAEP-RPKGILERLF 789
            V+V+TSGKGGVGKTT  +S+G+GLA RG  TC++DFDIGLRNLD+HLG ERRVIFDF++VI++ C LGQALI+D+R  +L LLAASQT+DKEALT EGV  V+ ELR +F FILCDSPAGIESGARHAMY AD A++VTNPE+SSCRDSDKM+GFI S+S RA+ G  PVQQ LLV RYDA+R   D+ LSV DI+E+LGLP+ G+IPE   VLT++N G PVI AE + AA A++DAVAR LGEER M+F +P  PKG+  R+F
Sbjct:   32 VVVITSGKGGVGKTTVTASIGYGLAQRGFRTCLIDFDIGLRNLDLHLGCERRVIFDFIHVIEKNCRLGQALIRDKRLDKLSLLAASQTRDKEALTEEGVELVLDELRAQFDFILCDSPAGIESGARHAMYFADDALLVTNPEISSCRDSDKMIGFIASKSLRAKEGRAPVQQRLLVNRYDANRVKNDDCLSVDDIEEMLGLPVCGVIPESAHVLTSSNMGQPVITAEGENAAVAFEDAVARFLGEEREMKFLQPDEPKGLFSRIF 296          
BLAST of mRNA_P-wetherbeei_contig2108.1.1 vs. uniprot
Match: H3GKX9_PHYRM (Putative septum site-determining protein MinD n=6 Tax=Peronosporaceae TaxID=4777 RepID=H3GKX9_PHYRM)

HSP 1 Score: 351 bits (901), Expect = 4.420e-118
Identity = 178/265 (67.17%), Postives = 216/265 (81.51%), Query Frame = 1
Query:    1 VIVVTSGKGGVGKTTTVSSLGWGLAARGHPTCVVDFDIGLRNLDIHLGAERRVIFDFVNVIQRECALGQALIQDRRNSRLHLLAASQTKDKEALTAEGVGRVIAELRERFAFILCDSPAGIESGARHAMYLADAAVIVTNPEVSSCRDSDKMVGFINSRSSRAERGEPPVQQTLLVTRYDADRAARDEMLSVADIQELLGLPLVGLIPECRSVLTATNEGTPVICAESD-AATAYDDAVARLLGEERPMRFAEPR-PKGILERLF 789
            V+V+TSGKGGVGKTT  +S+G+GLA RG  TC++DFDIGLRNLD+HLG ERRVIFDF++VI++ C L QALI+D+R  RL LLAASQT+DKEALT +GV  V+ ELR +F FILCDSPAGIESGARHAMY AD A++VTNPE+SSCRDSDKM+GFI S+S RA+ G  PVQQ LLV RYDA+R   D+ LSV DI+E+LGLP+ G+IPE   VLT++N G PVI AE + AA A++DAVAR LGEER M+F EP  PKG+  R+F
Sbjct:   29 VVVITSGKGGVGKTTVTASMGYGLAQRGFRTCLIDFDIGLRNLDLHLGCERRVIFDFIHVIEKNCRLSQALIKDKRLERLSLLAASQTRDKEALTEDGVEEVLDELRTQFDFILCDSPAGIESGARHAMYFADDAILVTNPEISSCRDSDKMIGFIASKSLRAKEGREPVQQRLLVNRYDANRVKNDDCLSVDDIEEMLGLPVCGVIPESSHVLTSSNMGQPVITAEGEKAAVAFEDAVARFLGEEREMKFLEPEAPKGLFGRIF 293          
BLAST of mRNA_P-wetherbeei_contig2108.1.1 vs. uniprot
Match: M4B7D1_HYAAE (Putative septum site-determining protein MinD n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B7D1_HYAAE)

HSP 1 Score: 344 bits (882), Expect = 3.620e-115
Identity = 175/265 (66.04%), Postives = 212/265 (80.00%), Query Frame = 1
Query:    1 VIVVTSGKGGVGKTTTVSSLGWGLAARGHPTCVVDFDIGLRNLDIHLGAERRVIFDFVNVIQRECALGQALIQDRRNSRLHLLAASQTKDKEALTAEGVGRVIAELRERFAFILCDSPAGIESGARHAMYLADAAVIVTNPEVSSCRDSDKMVGFINSRSSRAERGEPPVQQTLLVTRYDADRAARDEMLSVADIQELLGLPLVGLIPECRSVLTATNEGTPVICAESD-AATAYDDAVARLLGEERPMRFAEPR-PKGILERLF 789
            V+V+TSGKGGVGKTT  +S+G+GLA RG  TC++DFDIGLRNLD+HLG ERRVIFDF++VI+  C L QALI+D+R  RL LLAASQT+DKEALT EGV  V+ EL+ +F FILCDSPAGIESGARHAMY AD A++VTNPE+SSCRDSDKM+GFI S + RA+ G  PV Q LLV RYDA+R   D+ LSV DI+E+LGLP+ G+IPE   VLT++N G PVI  E + AA A++DAVAR LGEER M+F EP  PKG+  R+F
Sbjct:   31 VVVITSGKGGVGKTTVTASMGYGLAQRGFRTCLIDFDIGLRNLDLHLGCERRVIFDFIHVIENNCRLSQALIKDKRLDRLSLLAASQTRDKEALTEEGVEIVLDELKSQFDFILCDSPAGIESGARHAMYFADDALVVTNPEISSCRDSDKMIGFIASHARRAKEGREPVIQRLLVNRYDANRVKNDDCLSVDDIEEMLGLPVCGVIPESAHVLTSSNMGQPVITVEGEKAAVAFEDAVARFLGEERDMKFLEPEAPKGLFRRIF 295          
BLAST of mRNA_P-wetherbeei_contig2108.1.1 vs. uniprot
Match: A0A7S2E996_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2E996_TRICV)

HSP 1 Score: 342 bits (878), Expect = 3.660e-114
Identity = 173/267 (64.79%), Postives = 214/267 (80.15%), Query Frame = 1
Query:    1 VIVVTSGKGGVGKTTTVSSLGWGLAARGHPTCVVDFDIGLRNLDIHLGAERRVIFDFVNVIQRECALGQALIQDRRNSRLHLLAASQTKDKEALTAEGVGRVIAELRERFAFILCDSPAGIESGARHAMYLADAAVIVTNPEVSSCRDSDKMVGFINSRSSRAERGEP--PVQQTLLVTRYDADRAARDEMLSVADIQELLGLPLVGLIPECRSVLTATNEGTPVICA--ESDAATAYDDAVARLLGEERPMRFAEPRPKGILERLF 789
            ++ +TSGKGGVGKTT+ +S  +GLA RG  TCVVDFDIGLRNLDIHLG ERRVIFDFVNV+  EC L QALI+D+R  +L +LAASQT+DKE+LT +GV RV++EL + F +++ DSPAGIESGARHAMY AD A+IVTNPE+SSCRD+DKM+GFI+SRS R+E G+   PV QTLL+TRYD +RAA +E LS+ DI+ELLGLP+VG+IPE R VLT TN GTP+I    E+DAA+AY D V R LGEE+ +RF  P P    +R+F
Sbjct:   56 IVCITSGKGGVGKTTSAASFAFGLARRGRRTCVVDFDIGLRNLDIHLGMERRVIFDFVNVLMDECTLNQALIKDKREQKLAMLAASQTRDKESLTVDGVERVLSELSQMFDYVVLDSPAGIESGARHAMYFADDAIIVTNPELSSCRDADKMIGFISSRSRRSEIGDAVNPVSQTLLITRYDPERAAAEESLSLLDIEELLGLPVVGVIPESRDVLTCTNLGTPIITLGEENDAASAYSDMVDRFLGEEKELRFVMPEPVSFFKRIF 322          
BLAST of mRNA_P-wetherbeei_contig2108.1.1 vs. uniprot
Match: A0A5D6XSF8_9STRA (AAA_31 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XSF8_9STRA)

HSP 1 Score: 342 bits (876), Expect = 4.000e-114
Identity = 175/267 (65.54%), Postives = 211/267 (79.03%), Query Frame = 1
Query:    1 VIVVTSGKGGVGKTTTVSSLGWGLAARGHPTCVVDFDIGLRNLDIHLGAERRVIFDFVNVIQRECALGQALIQDRRNSRLHLLAASQTKDKEALTAEGVGRVIAELRERFAFILCDSPAGIESGARHAMYLADAAVIVTNPEVSSCRDSDKMVGFINSRSSRAERGEPPVQQTLLVTRYDADRAARDEMLSVADIQELLGLPLVGLIPECRSVLTATNEGTPVICAESD-AATAYDDAVARLLGEERPMRFAEPRP-KGILERLFQR 795
            V+VVTSGKGGVGKTT  +SLG+GLA+RG  TC++DFDIGLRNLD+HLG ERRVIFDF++VI++ C L QALI+D+R   L LLAASQT+DKEALT  GV  V+ EL++ + FILCDSPAGIESGARHAMY AD A++VTNPE+SSCRDSDKM+GFI S S RA     PV Q LL+ RYDA+R   D+ LS+ DI+E+LGLP+VG+IPE   VLT++N G PVI A  + AATA+DDAVAR LGE R M+F  P P KG+  RLF R
Sbjct:   39 VVVVTSGKGGVGKTTVTASLGFGLASRGFRTCLIDFDIGLRNLDLHLGCERRVIFDFIHVIEKNCRLNQALIKDKRLENLSLLAASQTRDKEALTEHGVEEVLDELKKDYDFILCDSPAGIESGARHAMYFADDAILVTNPEISSCRDSDKMIGFIASNSLRARENREPVHQRLLINRYDANRVKNDDCLSMEDIEEMLGLPVVGVIPESAHVLTSSNMGQPVITAAGEKAATAFDDAVARFLGESREMKFLAPEPPKGLFGRLFSR 305          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2108.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FU34_ECTSI9.320e-12672.73AAA_31 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A4D9DHA4_9STRA2.260e-12167.67AAA_31 domain-containing protein n=2 Tax=Monodopsi... [more]
A0A8K1CKX9_PYTOL2.390e-11965.54Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
G4Z8F7_PHYSP3.470e-11967.17Putative septum site-determining protein MinD n=17... [more]
K3WC66_GLOUD3.080e-11866.29Site-determining protein n=1 Tax=Globisporangium u... [more]
A0A6A3JCG4_9STRA3.460e-11867.17Putative septum site-determining protein MinD n=1 ... [more]
H3GKX9_PHYRM4.420e-11867.17Putative septum site-determining protein MinD n=6 ... [more]
M4B7D1_HYAAE3.620e-11566.04Putative septum site-determining protein MinD n=1 ... [more]
A0A7S2E996_TRICV3.660e-11464.79Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A5D6XSF8_9STRA4.000e-11465.54AAA_31 domain-containing protein n=1 Tax=Pythium b... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig2108contigP-wetherbeei_contig2108:189..3119 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FU34
PFAMsAAA_31,CbiA,ParA
Model size1001
Max annot lvl2759|Eukaryota
KEGG koko:K03609
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006996,GO:0008150,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009657,GO:0009658,GO:0009941,GO:0009987,GO:0010020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030899,GO:0031967,GO:0031975,GO:0042623,GO:0042802,GO:0042803,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043572,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046983,GO:0048285,GO:0071840
Exons7
Evalue9.86e-55
EggNOG OGsCOG0489@1|root,KOG3022@2759|Eukaryota
Ec32 ortholog descriptionATP binding protein MinD, bacterial-type
Ec32 orthologEc-25_000810.1
DescriptionComponent of the cytosolic iron-sulfur (Fe S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. The NBP35-CFD1 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins
Cds size414
COG categoryD
BRITEko00000,ko03036,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig2108.1.1prot_P-wetherbeei_contig2108.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig2108 1305..2916 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186215.9045675-UTR-P-wetherbeei_contig2108:188..2441683186215.9045675-UTR-P-wetherbeei_contig2108:188..244Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig2108 189..244 +
1683186215.9132419-UTR-P-wetherbeei_contig2108:601..6581683186215.9132419-UTR-P-wetherbeei_contig2108:601..658Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig2108 602..658 +
1683186215.9227743-UTR-P-wetherbeei_contig2108:802..9501683186215.9227743-UTR-P-wetherbeei_contig2108:802..950Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig2108 803..950 +
1683186215.9325557-UTR-P-wetherbeei_contig2108:1181..13041683186215.9325557-UTR-P-wetherbeei_contig2108:1181..1304Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig2108 1182..1304 +
1683186215.9799566-UTR-P-wetherbeei_contig2108:2916..31191683186215.9799566-UTR-P-wetherbeei_contig2108:2916..3119Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig2108 2917..3119 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186215.9418266-CDS-P-wetherbeei_contig2108:1304..13461683186215.9418266-CDS-P-wetherbeei_contig2108:1304..1346Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2108 1305..1346 +
1683186215.9510548-CDS-P-wetherbeei_contig2108:2023..21351683186215.9510548-CDS-P-wetherbeei_contig2108:2023..2135Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2108 2024..2135 +
1683186215.9608698-CDS-P-wetherbeei_contig2108:2398..24921683186215.9608698-CDS-P-wetherbeei_contig2108:2398..2492Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2108 2399..2492 +
1683186215.9708478-CDS-P-wetherbeei_contig2108:2750..29161683186215.9708478-CDS-P-wetherbeei_contig2108:2750..2916Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2108 2751..2916 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig2108.1.1

>prot_P-wetherbeei_contig2108.1.1 ID=prot_P-wetherbeei_contig2108.1.1|Name=mRNA_P-wetherbeei_contig2108.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=138bp
MYLADAAVIVTNPEVSSCRDSDKMVGFINSRSSRAERGEPPVQQTLLVTR
YDADRAARDEMLSVADIQELLGLPLVGLIPECRSVLTATNEGTPVICAES
DAATAYDDAVARLLGEERPMRFAEPRPKGILERLFQR*
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mRNA from alignment at P-wetherbeei_contig2108:189..3119+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig2108.1.1 ID=mRNA_P-wetherbeei_contig2108.1.1|Name=mRNA_P-wetherbeei_contig2108.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2931bp|location=Sequence derived from alignment at P-wetherbeei_contig2108:189..3119+ (Phaeothamnion wetherbeei SAG_119_79)
GTCATTGTTGTAACGTCGGGCAAAGGCGGCGTCGGTAAAACGACGACAGT CTCCAGGTAATGCCTCCTCTTCTGCCTGGGCTTTATTGGAGGAACAAATT CCTCTGGGGTGTACTGGTTTCGGCTAGGGCCACAAGAGTGCACCTATTCC TTGACAAGGCTGTATTCAAATTCTCCCTTCTAAGACGAGGTCCCGATTCA TTGCTCCAGATCCTGTTTGTGCTCCTGAGTCATATCGATACGAAATTTGG AAAGGGAGATCCTGCTTTCAAATACCGTCACGCCTCTGCACTTTGCTTCT TTCTGCAAAAATCCGGCGACTAGAGCTCCTCCATCCTCTGCAACTTATAT CCCCATTTCCCCACCCTGCCCCCTGCAATTCCGGTGGTTCGTCTTCTCTG CACCCGGGAGCAGCCTGGGCTGGGGGCTGGCGGCGAGGGGCCACCCGACG TGCGTCGTCGACTTTGACATGTGAGTGAGAGAATGTGTGAGCGAGCACGG GAGGATGGCCGAGTTTCCGCCCTTTGCGCGCGCATTCCAGTTGGTCGTTC TTCGCTCTGAACCCTGGCTTGTCCGGCTTCGCCGCCACCCGAATCGCCGT TGCTTTTCGGGCAGAGGGCTGCGAAATCTGGACATTCACTTGGGCGCGGA GCGGCGGGTCATCTTCGACTTCGTAAACGTGATCCAGAGGGAGTGCGCGC TGGGGCAGGCGCTCATCCAGGACCGACGGAACAGCCGGCTGCACCTCCTG GCGGCGTCGCAGGTGGGTTTGTTTGGTGTGGGTTCGTCTGACCATCCCAA ATGTAGCAAACAGATGTCACCGCCGGTCTAGACGCCGCCGCCTGCCCGGC TCCGCCGACCCTGCCTTCGTCGTCGCGCGCCTGTCTCCAAACAACCTAGG CCCCGGCGGCCTAAACTTCGGCGTGACGAACCAATCAATCCACCAACAAA GCGAACCAACTAAACAAACCAATCCAACGACATAAATGCACAGACGAAGG ACAAGGAGGCGCTGACGGCGGAGGGCGTGGGGCGCGTCATCGCCGAGCTG CGGGAGCGCTTCGCCTTCATTTTGTGTGACTCGCCCGCCGGCATCGAGAG TGGCGCCCGCCACGCCATGTACCTCGCCGACGCCGCCGTCATCGTCACCA ATCCGGAGGTATGCGGGTCGTGCGGGGTCTGTCGAGCGGAAGAGGTAGAG TCTGCCTGTTTGCATTCTATCCCCTCTTTTCCCTGGACCAACCTCACCCA CCCCAACCCAACTTCGTCCAAGCTCCGTTTCTGCAGCGTGCGGGAGGCAG ACGCGCTTGTTTCCGCCTGCTCGCCGCCGCCCCCCTACCGCCGGTGCCGT TTTATGTCGAAGAGACGGAGGAGATTACATATGGAGAAGGTATTGCAGGA CGAGAGGTCACACGAATTTGACGAATCTTGTTGGCCCGCGGACATAGCGG GGCGGACAAGCGCCGCCACAACGCGGCTCGCGCCGCCGGCGGACGGCCGG CTCTAGCCGAAGCCGCTGGCTGGCGAAGGCTTGGCTGCCTTTTGTCCGTT GGCCAACAAGGTTGAGACGGTTGAATAATTGTGCGCCCGCTCGTCCTGTA ATATCCCGTCTACTAACATGCAACCTCATTTTCCGTTTCTCCCGCTGATT ATTTTCTTTTCTTTCCGAGTGCTGCTGCCAGCCGTGCCGCCCCAAGGGGC GAGCACCGGCCGGCCTGGCCGCACGACGACCGGGGAGTGAAGCCCGCCCT CCCGGCATGTCCTTCTTTCTTCCTCTTTTCTCCAATCCCTACATGCAAGT CCCGTTTCTAAACTTTACTGATCCCCCTGAAACAGGTGTCGAGTTGCCGG GATTCTGACAAGATGGTGGGGTTCATCAATTCTCGCTCGAGTCGGGCTGA GAGGGGAGAGCCGCCCGTCCAGCAGACCCTCCTCGTCACGCGCTACGGTA AGCGTCGTGTTTGGGACCGCCTCCTTCTTTGCTCCGGAGAATATTGTTTC GCTTTTTTCTCCACGCCTCGTGATTTCTCAGCATGGCATTTCAGCGTGTG TTTCCTCATCGTCCTACCGCCGCTACCACTACCGCCATTATCATGTCGTA CCGTTGCCATTACCGCCATTCCCTTTTCCGCCCTGCCGCCCCCTCCGCCC ACCGCGGCTGCTACGTGTTATTTCCGGTGTGCTGCCTGTGTGCCGTGGCC GAACATACAGACGCGGATCGAGCGGCGAGGGACGAAATGCTGTCGGTGGC GGACATTCAGGAGCTGCTCGGACTGCCTCTCGTGGGACTCATCCCTGAGT GCAGGTGAGCGCGGCGTGAGGGTAGCGTTGCGGTCCCTTCCTTTTTAAAT GGCGAATCGGGGCAAGTCGTCTAGCGAGGTAGCGCCGGCCGGTATAATCC TTGCAGACCATTTGTCGCACTGGCTTGCGACGTGCGGATAGATATCCACC GTCTACCTGCTTTGTGATGCCCACCACCAAAATGTGACGTGAAGACGGAT TTGACATAGGATCCGCTTTGCCGCCCCGACATAAACATTTCACACCGTCT ACACCGCGACAGGTCGGTGCTGACAGCGACAAATGAAGGAACGCCCGTAA TCTGCGCCGAGTCGGACGCTGCCACCGCCTATGACGACGCCGTTGCCCGC CTGCTGGGGGAGGAGCGCCCGATGCGCTTCGCGGAGCCGCGTCCGAAGGG CATACTGGAGCGGCTATTCCAGCGATAACGCCGGCCCCGGCCCCGGCGCC GTCCGTCGGCAGCCGGTGGTTGGCGGCGAAGGCCGAGGCGTCCGTTGGCG GCGAAGGCCGGGGCAGTCGCTGCGGTGGTGGCGGCGACGCCGATACGTTG AAGTCCCCTTGCAGAAAGTAATCCAAGTGTACAAAACCATCATGGGCGCT AGAAATGGTAAAAGTACAATAAGCTTTCGCA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig2108:189..3119+

>mRNA_P-wetherbeei_contig2108.1.1 ID=mRNA_P-wetherbeei_contig2108.1.1|Name=mRNA_P-wetherbeei_contig2108.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=414bp|location=Sequence derived from alignment at P-wetherbeei_contig2108:189..3119+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTACCTCGCCGACGCCGCCGTCATCGTCACCAATCCGGAGGTGTCGAG
TTGCCGGGATTCTGACAAGATGGTGGGGTTCATCAATTCTCGCTCGAGTC
GGGCTGAGAGGGGAGAGCCGCCCGTCCAGCAGACCCTCCTCGTCACGCGC
TACGACGCGGATCGAGCGGCGAGGGACGAAATGCTGTCGGTGGCGGACAT
TCAGGAGCTGCTCGGACTGCCTCTCGTGGGACTCATCCCTGAGTGCAGGT
CGGTGCTGACAGCGACAAATGAAGGAACGCCCGTAATCTGCGCCGAGTCG
GACGCTGCCACCGCCTATGACGACGCCGTTGCCCGCCTGCTGGGGGAGGA
GCGCCCGATGCGCTTCGCGGAGCCGCGTCCGAAGGGCATACTGGAGCGGC
TATTCCAGCGATAA
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