mRNA_P-wetherbeei_contig21038.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig21038.2.1 vs. uniprot
Match: A0A6J6E232_9ZZZZ (Unannotated protein n=2 Tax=root TaxID=1 RepID=A0A6J6E232_9ZZZZ) HSP 1 Score: 335 bits (860), Expect = 9.890e-115 Identity = 167/212 (78.77%), Postives = 191/212 (90.09%), Query Frame = 1
Query: 1 GLAREGFRVEVAVDGAEALARFDIVKPDLVLLDVMLPKISGIDVCRQLRKRSQVPIIMVTAKSAEIDTVVGLEVGADDYVTKPYRIRELVARMRAVMRRLPSDGAVDATLAPAHSLVVGGVSLDAEEHRVTINGDEVSMPLKEFELLHILLANAGRVLPRETLIDRVWGSDYVGDTKTLDVHIKRLRGKVESDPAAPTRIVTIRGLGYKYER 636
GL +EGFRVEVA DG EAL +FD+V+PD+VLLDVMLPKISGIDVCRQLRK++QVPIIMVTAK AEIDTVVGLEVGADDY+TKPYR+RELVARMRAV+RR+P++ T ++L+VG V LD ++H+V +NG EV+MPLKEFELLHILLANAGRVLPRETLIDRVWG+DYVGDTKTLDVHIKRLR KVE DPA+PTRIVTIRGLGYK+ER
Sbjct: 22 GLKKEGFRVEVARDGMEALNKFDVVQPDVVLLDVMLPKISGIDVCRQLRKKTQVPIIMVTAKGAEIDTVVGLEVGADDYITKPYRMRELVARMRAVLRRVPNEATAGMTDLDGNTLMVGEVVLDPDQHKVVVNGAEVAMPLKEFELLHILLANAGRVLPRETLIDRVWGTDYVGDTKTLDVHIKRLRAKVEDDPASPTRIVTIRGLGYKFER 233
BLAST of mRNA_P-wetherbeei_contig21038.2.1 vs. uniprot
Match: A0A094P0Y5_9ACTN (Two-component response regulator PhoP n=7 Tax=root TaxID=1 RepID=A0A094P0Y5_9ACTN) HSP 1 Score: 334 bits (856), Expect = 4.020e-114 Identity = 166/212 (78.30%), Postives = 190/212 (89.62%), Query Frame = 1
Query: 1 GLAREGFRVEVAVDGAEALARFDIVKPDLVLLDVMLPKISGIDVCRQLRKRSQVPIIMVTAKSAEIDTVVGLEVGADDYVTKPYRIRELVARMRAVMRRLPSDGAVDATLAPAHSLVVGGVSLDAEEHRVTINGDEVSMPLKEFELLHILLANAGRVLPRETLIDRVWGSDYVGDTKTLDVHIKRLRGKVESDPAAPTRIVTIRGLGYKYER 636
GL +EGFRVEVA DG EALA+FDIV+PD+VLLDVMLPKISGIDVCRQLRKR+QVPIIMVTAK AEIDTVVGLEVGADDY+TKPYR+RELVARMRAV+RR +D V + ++L +G ++LD ++HRV + G+EV+MPLKEFELLH+LLANAGRVLPRETLIDRVWG+DYVGDTKTLDVHIKRLR K+E DPA PTRIVTIRGLGYK+ER
Sbjct: 22 GLKKEGFRVEVARDGMEALAKFDIVQPDVVLLDVMLPKISGIDVCRQLRKRTQVPIIMVTAKGAEIDTVVGLEVGADDYITKPYRMRELVARMRAVLRRSAADQGVKVSDLDDNALEIGAIALDPDQHRVLVKGEEVAMPLKEFELLHLLLANAGRVLPRETLIDRVWGTDYVGDTKTLDVHIKRLRSKIEDDPAVPTRIVTIRGLGYKFER 233
BLAST of mRNA_P-wetherbeei_contig21038.2.1 vs. uniprot
Match: UPI000E3579A6 (response regulator transcription factor n=1 Tax=Desertimonas flava TaxID=2064846 RepID=UPI000E3579A6) HSP 1 Score: 333 bits (854), Expect = 6.350e-114 Identity = 172/212 (81.13%), Postives = 189/212 (89.15%), Query Frame = 1
Query: 1 GLAREGFRVEVAVDGAEALARFDIVKPDLVLLDVMLPKISGIDVCRQLRKRSQVPIIMVTAKSAEIDTVVGLEVGADDYVTKPYRIRELVARMRAVMRRLPSDGAVDATLAPAHSLVVGGVSLDAEEHRVTINGDEVSMPLKEFELLHILLANAGRVLPRETLIDRVWGSDYVGDTKTLDVHIKRLRGKVESDPAAPTRIVTIRGLGYKYER 636
GL REGFRVEVA DG EAL RFD VKPDLVLLDVMLP++SGIDVCRQLRKRSQVPIIMVTAK AEIDTVVGLEVGADDYVTKPYR+RELVARMRAV+RR D A + L PA ++ VG V LD EEH V++ GD V++PLKEFELLH+LLANAGRVLPRETLIDRVWG+DYVGDTKTLDVH+KRLRGK+E DP+AP+RIVTIRGLGYKYER
Sbjct: 20 GLKREGFRVEVASDGFEALDRFDAVKPDLVLLDVMLPRVSGIDVCRQLRKRSQVPIIMVTAKGAEIDTVVGLEVGADDYVTKPYRLRELVARMRAVLRRAAGDDAGE--LGPA-AIQVGDVVLDPEEHTVSVAGDAVTLPLKEFELLHVLLANAGRVLPRETLIDRVWGNDYVGDTKTLDVHVKRLRGKIEPDPSAPSRIVTIRGLGYKYER 228
BLAST of mRNA_P-wetherbeei_contig21038.2.1 vs. uniprot
Match: A0A7K1B9U7_9ACTN (Response regulator n=2 Tax=root TaxID=1 RepID=A0A7K1B9U7_9ACTN) HSP 1 Score: 331 bits (849), Expect = 4.680e-113 Identity = 170/212 (80.19%), Postives = 188/212 (88.68%), Query Frame = 1
Query: 1 GLAREGFRVEVAVDGAEALARFDIVKPDLVLLDVMLPKISGIDVCRQLRKRSQVPIIMVTAKSAEIDTVVGLEVGADDYVTKPYRIRELVARMRAVMRRLPSDGAVDATLAPAHSLVVGGVSLDAEEHRVTINGDEVSMPLKEFELLHILLANAGRVLPRETLIDRVWGSDYVGDTKTLDVHIKRLRGKVESDPAAPTRIVTIRGLGYKYER 636
GL REGFRVEVA DG EAL RFD+V+PDLVLLDVMLP+ISGIDVCRQLRKR+QVPIIMVTAKS+EIDTVVGLEVGADDYVTKPYRIRELVARMRAV+RR + A L S+VVG V+LD EEHRVT++G+ +++PLKEFELLH+LLANAGRVLPRE LIDRVWGSDYVGDTKTLDVH+KRLR K+E DPA P RIVTIRGLGYKYER
Sbjct: 22 GLTREGFRVEVARDGYEALERFDVVRPDLVLLDVMLPRISGIDVCRQLRKRTQVPIIMVTAKSSEIDTVVGLEVGADDYVTKPYRIRELVARMRAVLRRNAREDAAVPDLGVG-SVVVGDVALDPEEHRVTVDGEPLNLPLKEFELLHLLLANAGRVLPREVLIDRVWGSDYVGDTKTLDVHVKRLRSKIEPDPANPVRIVTIRGLGYKYER 232
BLAST of mRNA_P-wetherbeei_contig21038.2.1 vs. uniprot
Match: A0A7W1CLN2_9ACTN (Response regulator transcription factor n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1CLN2_9ACTN) HSP 1 Score: 329 bits (844), Expect = 2.120e-112 Identity = 170/212 (80.19%), Postives = 186/212 (87.74%), Query Frame = 1
Query: 1 GLAREGFRVEVAVDGAEALARFDIVKPDLVLLDVMLPKISGIDVCRQLRKRSQVPIIMVTAKSAEIDTVVGLEVGADDYVTKPYRIRELVARMRAVMRRLPSDGAVDATLAPAHSLVVGGVSLDAEEHRVTINGDEVSMPLKEFELLHILLANAGRVLPRETLIDRVWGSDYVGDTKTLDVHIKRLRGKVESDPAAPTRIVTIRGLGYKYER 636
GL REGF VEVAVDG EAL RFD VKPDLVLLDVMLP+ISGIDVCRQLRKRSQVPIIMVTAK AEIDTVVGLEVGADDYVTKPYR+RELVARMRAV+RR PSD A + L P+ + VG V LD +EH V ++G +S+PLKEFELLH+LLANAGRVLPR+TLIDRVWGSDYVGDTKTLDVH+KRLR K+E DP+ P RIVTIRGLGYKYER
Sbjct: 20 GLRREGFHVEVAVDGYEALERFDDVKPDLVLLDVMLPRISGIDVCRQLRKRSQVPIIMVTAKGAEIDTVVGLEVGADDYVTKPYRLRELVARMRAVLRRAPSDAAGE--LGPS-VVTVGDVVLDPDEHTVNVSGQPLSLPLKEFELLHVLLANAGRVLPRDTLIDRVWGSDYVGDTKTLDVHVKRLRSKIEPDPSRPARIVTIRGLGYKYER 228
BLAST of mRNA_P-wetherbeei_contig21038.2.1 vs. uniprot
Match: A0A4P5RWB4_9ACTN (Sensory transduction protein regX3 n=6 Tax=root TaxID=1 RepID=A0A4P5RWB4_9ACTN) HSP 1 Score: 328 bits (840), Expect = 1.060e-111 Identity = 167/212 (78.77%), Postives = 189/212 (89.15%), Query Frame = 1
Query: 1 GLAREGFRVEVAVDGAEALARFDIVKPDLVLLDVMLPKISGIDVCRQLRKRSQVPIIMVTAKSAEIDTVVGLEVGADDYVTKPYRIRELVARMRAVMRRLPSDGAVDATLAPAHSLVVGGVSLDAEEHRVTINGDEVSMPLKEFELLHILLANAGRVLPRETLIDRVWGSDYVGDTKTLDVHIKRLRGKVESDPAAPTRIVTIRGLGYKYER 636
GL +EGFRVEVA DG EALA+FD V+PDLVLLDVMLPKISGIDVCRQLRK+SQVPIIMVTAK AEIDTVVGLEVGADDY+TKPYR+RELVARMRAV+RR SD + + +++ VG ++LD ++HRV + G EV+MPLKEFELLHIL+ANAGRVLPRETLIDRVWG+DYVGDTKTLDVHIKRLRGKVE DPA PTRIVTIRGLGYK+E+
Sbjct: 22 GLKKEGFRVEVARDGMEALAKFDSVRPDLVLLDVMLPKISGIDVCRQLRKKSQVPIIMVTAKGAEIDTVVGLEVGADDYITKPYRMRELVARMRAVLRR-SSDESNNMGDLDGNAMEVGTIALDPDQHRVLVRGQEVTMPLKEFELLHILMANAGRVLPRETLIDRVWGTDYVGDTKTLDVHIKRLRGKVEDDPAVPTRIVTIRGLGYKFEK 232
BLAST of mRNA_P-wetherbeei_contig21038.2.1 vs. uniprot
Match: A0A524N6Z8_9ACTN (Response regulator transcription factor n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A524N6Z8_9ACTN) HSP 1 Score: 327 bits (839), Expect = 1.360e-111 Identity = 171/212 (80.66%), Postives = 187/212 (88.21%), Query Frame = 1
Query: 1 GLAREGFRVEVAVDGAEALARFDIVKPDLVLLDVMLPKISGIDVCRQLRKRSQVPIIMVTAKSAEIDTVVGLEVGADDYVTKPYRIRELVARMRAVMRRLPSDGAVDATLAPAHSLVVGGVSLDAEEHRVTINGDEVSMPLKEFELLHILLANAGRVLPRETLIDRVWGSDYVGDTKTLDVHIKRLRGKVESDPAAPTRIVTIRGLGYKYER 636
GL REGF V VAVDGAEALA+FD V PDLVLLDVMLPKISGIDVCRQLRK++QVPIIMVTAK AEIDTVVGLEVGADDYVTKPYR+RELVARMRAV+RR ++ A L P ++ VG V LD EEHRVT+ G +VS+PLKEFELLH+LLANAGRVLPRETLIDRVWG+DYVGDTKTLDVH+KRLR K+E DPA PTRIVTIRGLGYKYER
Sbjct: 22 GLRREGFEVVVAVDGAEALAKFDEVAPDLVLLDVMLPKISGIDVCRQLRKKTQVPIIMVTAKGAEIDTVVGLEVGADDYVTKPYRLRELVARMRAVLRRADTNSNTVA-LTPG-TIEVGDVRLDPEEHRVTVAGLDVSLPLKEFELLHLLLANAGRVLPRETLIDRVWGNDYVGDTKTLDVHVKRLRSKIEPDPAVPTRIVTIRGLGYKYER 231
BLAST of mRNA_P-wetherbeei_contig21038.2.1 vs. uniprot
Match: A0A6N2DQ54_9ACTN (DNA-binding response regulator n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DQ54_9ACTN) HSP 1 Score: 327 bits (838), Expect = 1.860e-111 Identity = 166/212 (78.30%), Postives = 186/212 (87.74%), Query Frame = 1
Query: 1 GLAREGFRVEVAVDGAEALARFDIVKPDLVLLDVMLPKISGIDVCRQLRKRSQVPIIMVTAKSAEIDTVVGLEVGADDYVTKPYRIRELVARMRAVMRRLPSDGAVDATLAPAHSLVVGGVSLDAEEHRVTINGDEVSMPLKEFELLHILLANAGRVLPRETLIDRVWGSDYVGDTKTLDVHIKRLRGKVESDPAAPTRIVTIRGLGYKYER 636
GLAREGFRVEVA DG EAL RFD+V PD+VLLDVMLP++SGIDVCR+LR RS VPIIMV+AK EIDTVVGLEVGADDY+TKPYRIRELVAR+RAV+RR P+D AV+ + A S+ VG V LD +EH VT+ G+ V+MPLKEFELLH+LLANAGRVLPRETLIDRVWG+DYVGDTKTLDVH+KRLR KVE DPA P RIVTIRGLGYKYER
Sbjct: 22 GLAREGFRVEVATDGLEALERFDLVNPDVVLLDVMLPRVSGIDVCRRLRLRSNVPIIMVSAKGGEIDTVVGLEVGADDYITKPYRIRELVARVRAVLRRSPADRAVELS---AGSIQVGDVVLDPDEHSVTVAGESVTMPLKEFELLHLLLANAGRVLPRETLIDRVWGNDYVGDTKTLDVHVKRLRAKVEPDPAVPRRIVTIRGLGYKYER 230
BLAST of mRNA_P-wetherbeei_contig21038.2.1 vs. uniprot
Match: A0A6I2YXE7_9ACTN (Response regulator n=4 Tax=root TaxID=1 RepID=A0A6I2YXE7_9ACTN) HSP 1 Score: 326 bits (835), Expect = 5.510e-111 Identity = 165/212 (77.83%), Postives = 186/212 (87.74%), Query Frame = 1
Query: 1 GLAREGFRVEVAVDGAEALARFDIVKPDLVLLDVMLPKISGIDVCRQLRKRSQVPIIMVTAKSAEIDTVVGLEVGADDYVTKPYRIRELVARMRAVMRRLPSDGAVDATLAPAHSLVVGGVSLDAEEHRVTINGDEVSMPLKEFELLHILLANAGRVLPRETLIDRVWGSDYVGDTKTLDVHIKRLRGKVESDPAAPTRIVTIRGLGYKYER 636
GL REGFRVEVA DGAEALARFD VKPD+VLLDVMLP+ISG+DVCR+LRKRSQVPIIMVTAKSAEIDTVVGLEVGADDY+TKPYR+RELVARMRAV+RR P D D T+ L VG VSLD ++H V + G VS+PLKEF+LL +LLANAGRVL R+TLIDRVWG+DYVGDTKTLDVHIKRLR ++E+DPA PTR+VTIRGLGYKYE+
Sbjct: 22 GLQREGFRVEVARDGAEALARFDEVKPDIVLLDVMLPRISGVDVCRELRKRSQVPIIMVTAKSAEIDTVVGLEVGADDYITKPYRMRELVARMRAVLRRTPGDRGADLTVG---GLTVGDVSLDPDQHVVVVRGATVSLPLKEFDLLRLLLANAGRVLSRDTLIDRVWGADYVGDTKTLDVHIKRLRSRIEADPANPTRVVTIRGLGYKYEK 230
BLAST of mRNA_P-wetherbeei_contig21038.2.1 vs. uniprot
Match: UPI00034DA3E5 (response regulator transcription factor n=1 Tax=Ilumatobacter nonamiensis TaxID=467093 RepID=UPI00034DA3E5) HSP 1 Score: 325 bits (832), Expect = 1.520e-110 Identity = 168/214 (78.50%), Postives = 184/214 (85.98%), Query Frame = 1
Query: 1 GLAREGFRVEVAVDGAEALARFDIVKPDLVLLDVMLPKISGIDVCRQLRKRSQVPIIMVTAKSAEIDTVVGLEVGADDYVTKPYRIRELVARMRAVMRRLPSDGAVDATLAPAHS--LVVGGVSLDAEEHRVTINGDEVSMPLKEFELLHILLANAGRVLPRETLIDRVWGSDYVGDTKTLDVHIKRLRGKVESDPAAPTRIVTIRGLGYKYER 636
GL REGF+VE A+DGAEAL RFD V PDLVLLDVMLPK+SGIDVCRQLRKR+QVPIIMVTAK AEIDTVVGLEVGADDYVTKPYR+RELVARMRAV+RR P AP S L V GVSLD +H VT+NG+ +S+PLKEFELLH+LLANAG+VLPRETLIDRVWG DYVGDTKTLDVHIKRLRGK+E+DP+ PTRI TIRGLGYKY R
Sbjct: 22 GLTREGFKVEFAIDGAEALDRFDSVDPDLVLLDVMLPKVSGIDVCRQLRKRTQVPIIMVTAKGAEIDTVVGLEVGADDYVTKPYRLRELVARMRAVLRRAPEHH----NGAPLDSACLAVDGVSLDPGQHLVTVNGESLSLPLKEFELLHLLLANAGQVLPRETLIDRVWGLDYVGDTKTLDVHIKRLRGKIETDPSQPTRITTIRGLGYKYSR 231 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21038.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig21038.2.1 >prot_P-wetherbeei_contig21038.2.1 ID=prot_P-wetherbeei_contig21038.2.1|Name=mRNA_P-wetherbeei_contig21038.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=212bp GLAREGFRVEVAVDGAEALARFDIVKPDLVLLDVMLPKISGIDVCRQLRKback to top mRNA from alignment at P-wetherbeei_contig21038:555..1190- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig21038.2.1 ID=mRNA_P-wetherbeei_contig21038.2.1|Name=mRNA_P-wetherbeei_contig21038.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=636bp|location=Sequence derived from alignment at P-wetherbeei_contig21038:555..1190- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig21038:555..1190- >mRNA_P-wetherbeei_contig21038.2.1 ID=mRNA_P-wetherbeei_contig21038.2.1|Name=mRNA_P-wetherbeei_contig21038.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=636bp|location=Sequence derived from alignment at P-wetherbeei_contig21038:555..1190- (Phaeothamnion wetherbeei SAG_119_79)back to top |