mRNA_P-wetherbeei_contig21032.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig21032.1.1
Unique NamemRNA_P-wetherbeei_contig21032.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig21032.1.1 vs. uniprot
Match: A0A1H5J1X6_9BRAD (ATP-binding cassette, subfamily B, MsbA n=3 Tax=Bradyrhizobium TaxID=374 RepID=A0A1H5J1X6_9BRAD)

HSP 1 Score: 721 bits (1860), Expect = 1.030e-257
Identity = 381/396 (96.21%), Postives = 389/396 (98.23%), Query Frame = 1
Query:    1 QWVANDLRIRIYEHLHRLSLRYYDNVKTGALMSTITSDVATIQSFASSSTLDIVVDLITILFMVGLMFWLDWDFTLIAVGFTPFLVVFLFHFKKAVKEVTRTVRARQSEIVAVVQEGLGSVRAVKAFGRQDLEVAHLEAASHATVEAALKARQVKSLLSPMVNIVVAICTGIVLWKGTSLIVAGTLTAGALTVYLAYLSKFFKPVKDLASMTSAIAQTTVALERIQTILSADDIIQEHADPTEPGRLKGAITFEHVAFGYGDDAPVLRDVSFGIEPGQVVGIVGPTGSGKSTVLSLVPRFYNPTRGRVLIDGEDISTYKLASLRSQIGFVLQETVLFRGTIRENIAYGRPGATDEEVIAAAKIANADEFISRMPHGYDSPVGERGDTLSGGQRQRI 1188
            QWVANDLRIRIYEHLHRLSLRYYDNVKTGALMSTITSDVATIQSFASSSTLDIVVDLITI+FMVGLMFWLDWDFTLIAVGFTPFLVVFLFHFKKAVKEVTRTVRARQS+IVAVVQEGLGSVRAVKAFGRQDLEVAHLEAASHATVEA LKARQVKSLLSPMVNIVVAICTGIVLWKGTSLIVAGT+TAGALTVYLAYLSKFFKPVKDLASMTSAIAQTTVALERIQTILSADDIIQE AD T+PGRLKGAITF+HVAFGYGDD PVLR+VSF IEPGQVVGIVGPTGSGKSTVLSLVPRFYNPT GRVLIDG+DISTYKLASLRSQ+GFVLQETVLFRGTIRENIAYGRPGATDEEVIAAAKIANADEFISRMPHGYDS VGERGDTLSGGQRQRI
Sbjct:  127 QWVANDLRIRIYEHLHRLSLRYYDNVKTGALMSTITSDVATIQSFASSSTLDIVVDLITIVFMVGLMFWLDWDFTLIAVGFTPFLVVFLFHFKKAVKEVTRTVRARQSDIVAVVQEGLGSVRAVKAFGRQDLEVAHLEAASHATVEAVLKARQVKSLLSPMVNIVVAICTGIVLWKGTSLIVAGTMTAGALTVYLAYLSKFFKPVKDLASMTSAIAQTTVALERIQTILSADDIIQERADATDPGRLKGAITFDHVAFGYGDDIPVLRNVSFSIEPGQVVGIVGPTGSGKSTVLSLVPRFYNPTSGRVLIDGKDISTYKLASLRSQVGFVLQETVLFRGTIRENIAYGRPGATDEEVIAAAKIANADEFISRMPHGYDSAVGERGDTLSGGQRQRI 522          
BLAST of mRNA_P-wetherbeei_contig21032.1.1 vs. uniprot
Match: UPI001FFFEBAB (ABC transporter ATP-binding protein/permease n=3 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI001FFFEBAB)

HSP 1 Score: 654 bits (1688), Expect = 5.530e-232
Identity = 337/396 (85.10%), Postives = 374/396 (94.44%), Query Frame = 1
Query:    1 QWVANDLRIRIYEHLHRLSLRYYDNVKTGALMSTITSDVATIQSFASSSTLDIVVDLITILFMVGLMFWLDWDFTLIAVGFTPFLVVFLFHFKKAVKEVTRTVRARQSEIVAVVQEGLGSVRAVKAFGRQDLEVAHLEAASHATVEAALKARQVKSLLSPMVNIVVAICTGIVLWKGTSLIVAGTLTAGALTVYLAYLSKFFKPVKDLASMTSAIAQTTVALERIQTILSADDIIQEHADPTEPGRLKGAITFEHVAFGYGDDAPVLRDVSFGIEPGQVVGIVGPTGSGKSTVLSLVPRFYNPTRGRVLIDGEDISTYKLASLRSQIGFVLQETVLFRGTIRENIAYGRPGATDEEVIAAAKIANADEFISRMPHGYDSPVGERGDTLSGGQRQRI 1188
            QWVANDLRIRIYEHLHRLSLR+YD  KTGALMSTITSDVATIQSFASSSTL I+VD+ITI+FM+GLMFWLDWDFTLIA+  TPFL++ + HFK+AVKEVTRTVRARQSE+VAVVQEGLGSVRAVKAFGRQDLE+AHLEAASHATVEAALKARQVKSLLSPMV+IVVAICT IVLW+GT+LIVAGT+TAGALTVYLAYL+KFFKPVKDLASMTSAIAQTTVALERIQ ILSAD++I+EH + T+PGR+ GAI FE++AFGY D++ VLRDVSF IEPGQVVGIVGPTGSGKSTVLSLVPRFY+P  GR+LIDG D++T+KL  LR+Q+GFVLQETVLFRGTIRENIAYGRPGATDEEV+AAAK+ANADEFISRMPHGYD+ VGERGDTLSGGQRQRI
Sbjct:  100 QWVANDLRIRIYEHLHRLSLRFYDTAKTGALMSTITSDVATIQSFASSSTLSIIVDIITIIFMIGLMFWLDWDFTLIALAITPFLLMAVMHFKRAVKEVTRTVRARQSEVVAVVQEGLGSVRAVKAFGRQDLEIAHLEAASHATVEAALKARQVKSLLSPMVSIVVAICTAIVLWRGTALIVAGTMTAGALTVYLAYLAKFFKPVKDLASMTSAIAQTTVALERIQKILSADEVIREHPEATDPGRVNGAIAFENIAFGYDDESQVLRDVSFKIEPGQVVGIVGPTGSGKSTVLSLVPRFYDPKGGRILIDGVDVATFKLDVLRAQVGFVLQETVLFRGTIRENIAYGRPGATDEEVVAAAKVANADEFISRMPHGYDTVVGERGDTLSGGQRQRI 495          
BLAST of mRNA_P-wetherbeei_contig21032.1.1 vs. uniprot
Match: A0A1Q5S9S7_9BRAD (ABC transporter n=9 Tax=Bradyrhizobium TaxID=374 RepID=A0A1Q5S9S7_9BRAD)

HSP 1 Score: 644 bits (1662), Expect = 4.290e-228
Identity = 337/396 (85.10%), Postives = 372/396 (93.94%), Query Frame = 1
Query:    1 QWVANDLRIRIYEHLHRLSLRYYDNVKTGALMSTITSDVATIQSFASSSTLDIVVDLITILFMVGLMFWLDWDFTLIAVGFTPFLVVFLFHFKKAVKEVTRTVRARQSEIVAVVQEGLGSVRAVKAFGRQDLEVAHLEAASHATVEAALKARQVKSLLSPMVNIVVAICTGIVLWKGTSLIVAGTLTAGALTVYLAYLSKFFKPVKDLASMTSAIAQTTVALERIQTILSADDIIQEHADPTEPGRLKGAITFEHVAFGYGDDAPVLRDVSFGIEPGQVVGIVGPTGSGKSTVLSLVPRFYNPTRGRVLIDGEDISTYKLASLRSQIGFVLQETVLFRGTIRENIAYGRPGATDEEVIAAAKIANADEFISRMPHGYDSPVGERGDTLSGGQRQRI 1188
            QWVANDLR++IY HLHRLSLRYYDNVKTG LMSTITSDV+TIQ FASS+TLDIVVDLITILFM+GLMF+LDWDFTLIAV   PFL+VFLFHFKKAVKEVTRTVRARQS+IVAVVQ+GLGSVRAVKAFGRQDLE+AHLEAASHATVEAALKARQ+KSL+SP V+IVVAICTGIVLW+GTSLIVAGTLTAGALTVYLAYL+KFFKPVKDLASMTS IAQTTVALERIQTILSADD+I +  D  +PGR+KGAI+F+ VAFGY DDAP+LR+VSF IEPGQVVG+VGPTGSGKSTVLSL+PRFY  + GRVLIDG D+S+YKLA+LR+Q+GFVLQETVLFRGTIRENIAYG PGAT+EE+IAAAK+ANA +FIS MPHGYDS VGERGDTLSGGQRQRI
Sbjct:   97 QWVANDLRVQIYTHLHRLSLRYYDNVKTGTLMSTITSDVSTIQGFASSATLDIVVDLITILFMLGLMFYLDWDFTLIAVALVPFLLVFLFHFKKAVKEVTRTVRARQSDIVAVVQQGLGSVRAVKAFGRQDLEIAHLEAASHATVEAALKARQIKSLMSPTVSIVVAICTGIVLWRGTSLIVAGTLTAGALTVYLAYLAKFFKPVKDLASMTSTIAQTTVALERIQTILSADDLITDPVDGVDPGRVKGAISFDKVAFGY-DDAPILREVSFEIEPGQVVGLVGPTGSGKSTVLSLLPRFYEASSGRVLIDGLDVSSYKLATLRAQVGFVLQETVLFRGTIRENIAYGCPGATEEEIIAAAKVANAHDFISAMPHGYDSMVGERGDTLSGGQRQRI 491          
BLAST of mRNA_P-wetherbeei_contig21032.1.1 vs. uniprot
Match: A0A7G6U5X7_9BRAD (ABC transporter ATP-binding protein n=5 Tax=Tardiphaga TaxID=1395974 RepID=A0A7G6U5X7_9BRAD)

HSP 1 Score: 631 bits (1628), Expect = 7.210e-223
Identity = 325/396 (82.07%), Postives = 364/396 (91.92%), Query Frame = 1
Query:    1 QWVANDLRIRIYEHLHRLSLRYYDNVKTGALMSTITSDVATIQSFASSSTLDIVVDLITILFMVGLMFWLDWDFTLIAVGFTPFLVVFLFHFKKAVKEVTRTVRARQSEIVAVVQEGLGSVRAVKAFGRQDLEVAHLEAASHATVEAALKARQVKSLLSPMVNIVVAICTGIVLWKGTSLIVAGTLTAGALTVYLAYLSKFFKPVKDLASMTSAIAQTTVALERIQTILSADDIIQEHADPTEPGRLKGAITFEHVAFGYGDDAPVLRDVSFGIEPGQVVGIVGPTGSGKSTVLSLVPRFYNPTRGRVLIDGEDISTYKLASLRSQIGFVLQETVLFRGTIRENIAYGRPGATDEEVIAAAKIANADEFISRMPHGYDSPVGERGDTLSGGQRQRI 1188
            QWVANDLRIRIY HLHRLSLRYYD  KTGALMSTIT+DV T+Q+FASSSTLDI++DLITI+FM+GLMFWLDWDFTLIA+G TPFL+VF+FHFK+AVK+VTR VR RQSEIVAVVQ+GLG VRAV AFGRQDLE+A LEAASHATVEAA+KARQVKSLLSP+V+IVVA CT IVLWKGTSLIVAGT+T GALTVYLAYL++FFKPVKDLASMTSAIAQTTVALERIQ IL+ADD+I E     +PGR KGAITFE+VAF Y ++A VLR VS  IEPGQ+VG+VGPTGSGKSTVLSL+PRFY+ T GRVLIDG D++ YKL++LR+Q+GFVLQETVLFRGTIRENIAYGRPGATDEE++AAAKIANADEFI+RMPHGYDS VGERGDTLSGGQRQRI
Sbjct:  100 QWVANDLRIRIYAHLHRLSLRYYDKAKTGALMSTITTDVTTLQNFASSSTLDILLDLITIVFMIGLMFWLDWDFTLIALGITPFLIVFVFHFKRAVKDVTRAVRQRQSEIVAVVQQGLGQVRAVTAFGRQDLELARLEAASHATVEAAMKARQVKSLLSPVVSIVVAFCTAIVLWKGTSLIVAGTMTTGALTVYLAYLAQFFKPVKDLASMTSAIAQTTVALERIQNILAADDVIVEKPGAVDPGRAKGAITFENVAFAYSEEASVLRGVSLHIEPGQIVGVVGPTGSGKSTVLSLIPRFYDATSGRVLIDGTDVTDYKLSALRAQVGFVLQETVLFRGTIRENIAYGRPGATDEEIVAAAKIANADEFITRMPHGYDSMVGERGDTLSGGQRQRI 495          
BLAST of mRNA_P-wetherbeei_contig21032.1.1 vs. uniprot
Match: A0A520FZJ0_9BURK (ABC transporter ATP-binding protein n=1 Tax=Variovorax sp. TaxID=1871043 RepID=A0A520FZJ0_9BURK)

HSP 1 Score: 616 bits (1588), Expect = 8.570e-217
Identity = 320/396 (80.81%), Postives = 355/396 (89.65%), Query Frame = 1
Query:    1 QWVANDLRIRIYEHLHRLSLRYYDNVKTGALMSTITSDVATIQSFASSSTLDIVVDLITILFMVGLMFWLDWDFTLIAVGFTPFLVVFLFHFKKAVKEVTRTVRARQSEIVAVVQEGLGSVRAVKAFGRQDLEVAHLEAASHATVEAALKARQVKSLLSPMVNIVVAICTGIVLWKGTSLIVAGTLTAGALTVYLAYLSKFFKPVKDLASMTSAIAQTTVALERIQTILSADDIIQEHADPTEPGRLKGAITFEHVAFGYGDDAPVLRDVSFGIEPGQVVGIVGPTGSGKSTVLSLVPRFYNPTRGRVLIDGEDISTYKLASLRSQIGFVLQETVLFRGTIRENIAYGRPGATDEEVIAAAKIANADEFISRMPHGYDSPVGERGDTLSGGQRQRI 1188
            QWVANDLR+RIYEHLHRLSL +YD  KTG LMSTITSDV+T+QSFASSSTLDIVVD++TI+FM+ LM WLDWDFTLIAV   PFL++F+F  KKAVKEVTR VR RQSEIVAVVQEGLGSVRAVKAFGRQDLEV H+EAASHA+ EAAL+AR VKSLLSP+V +VVA+CTGIVLWKGT LI+AGT+TAGALTVYLAYL KFFKPVKDLASM S +AQTTVALERIQ IL ADD+I EH   ++PGR +G ITFE+VAFGYGDDAPVLRDVSF I+ GQVVG VGPTGSGKSTV+SL+PRFY+PT GRVLIDG DI   KLA+LR+QIGFVLQETVLFRGTI ENIAYG+PGA+ EE+IAAAK+ANADEFI RMPHGYDS VGERGDTLSGGQRQRI
Sbjct:  100 QWVANDLRLRIYEHLHRLSLGFYDTAKTGTLMSTITSDVSTVQSFASSSTLDIVVDVVTIVFMLCLMLWLDWDFTLIAVAVMPFLLLFVFRLKKAVKEVTREVRVRQSEIVAVVQEGLGSVRAVKAFGRQDLEVRHMEAASHASAEAALRARSVKSLLSPVVGVVVALCTGIVLWKGTGLIIAGTMTAGALTVYLAYLGKFFKPVKDLASMASTLAQTTVALERIQKILGADDVIHEHPAASDPGRARGEITFENVAFGYGDDAPVLRDVSFTIKAGQVVGFVGPTGSGKSTVVSLMPRFYDPTAGRVLIDGLDIRMQKLAALRAQIGFVLQETVLFRGTIGENIAYGKPGASKEEIIAAAKLANADEFIGRMPHGYDSMVGERGDTLSGGQRQRI 495          
BLAST of mRNA_P-wetherbeei_contig21032.1.1 vs. uniprot
Match: A0A3S0DS53_9BRAD (ABC transporter ATP-binding protein n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A3S0DS53_9BRAD)

HSP 1 Score: 615 bits (1586), Expect = 1.780e-216
Identity = 320/396 (80.81%), Postives = 359/396 (90.66%), Query Frame = 1
Query:    1 QWVANDLRIRIYEHLHRLSLRYYDNVKTGALMSTITSDVATIQSFASSSTLDIVVDLITILFMVGLMFWLDWDFTLIAVGFTPFLVVFLFHFKKAVKEVTRTVRARQSEIVAVVQEGLGSVRAVKAFGRQDLEVAHLEAASHATVEAALKARQVKSLLSPMVNIVVAICTGIVLWKGTSLIVAGTLTAGALTVYLAYLSKFFKPVKDLASMTSAIAQTTVALERIQTILSADDIIQEHADPTEPGRLKGAITFEHVAFGYGDDAPVLRDVSFGIEPGQVVGIVGPTGSGKSTVLSLVPRFYNPTRGRVLIDGEDISTYKLASLRSQIGFVLQETVLFRGTIRENIAYGRPGATDEEVIAAAKIANADEFISRMPHGYDSPVGERGDTLSGGQRQRI 1188
            QWVANDLR+RIY+HLHRLSLRYYDNVK G+L+STI +DV TIQSFASSSTLDI+VD ITI+FMVGLMFWLDWDFTLIA+G TPFL+ F+   KKAVKEVTR VR RQSE++A+VQ+GLGSVRAV+AFGRQDLE+A LEAASHATV+AA++ARQVKS+LSP+VN+VVA CT IVLWKGTSLIVAGT+TAGALTVYLAYL+KFFKPVKDLASMTSAIAQTTVALERI++ILSADDIIQ   D  +PGRL+G + FE+VAFGY  D PVLRDVSF I PGQVVG+VGPTGSGKSTVLSL+PRFY  T GR+LIDG+DI + KL++LR QIGFVLQETVLFRGTIRENIAYGRP AT EEV+AAA+IANADEFI  MPHGYDS VGERGDTLSGGQRQRI
Sbjct:  100 QWVANDLRVRIYQHLHRLSLRYYDNVKIGSLISTIMTDVDTIQSFASSSTLDILVDFITIVFMVGLMFWLDWDFTLIALGVTPFLLFFVMRLKKAVKEVTRVVRTRQSEMLAIVQQGLGSVRAVQAFGRQDLELARLEAASHATVDAAMRARQVKSVLSPLVNVVVAACTAIVLWKGTSLIVAGTMTAGALTVYLAYLTKFFKPVKDLASMTSAIAQTTVALERIRSILSADDIIQASPDAIDPGRLQGDVRFENVAFGYEKDVPVLRDVSFEIRPGQVVGVVGPTGSGKSTVLSLLPRFYEATGGRILIDGQDIRSLKLSALRDQIGFVLQETVLFRGTIRENIAYGRPDATHEEVVAAARIANADEFIRHMPHGYDSLVGERGDTLSGGQRQRI 495          
BLAST of mRNA_P-wetherbeei_contig21032.1.1 vs. uniprot
Match: K8P0Q8_9BRAD (Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 TaxID=883079 RepID=K8P0Q8_9BRAD)

HSP 1 Score: 615 bits (1585), Expect = 2.530e-216
Identity = 321/396 (81.06%), Postives = 359/396 (90.66%), Query Frame = 1
Query:    1 QWVANDLRIRIYEHLHRLSLRYYDNVKTGALMSTITSDVATIQSFASSSTLDIVVDLITILFMVGLMFWLDWDFTLIAVGFTPFLVVFLFHFKKAVKEVTRTVRARQSEIVAVVQEGLGSVRAVKAFGRQDLEVAHLEAASHATVEAALKARQVKSLLSPMVNIVVAICTGIVLWKGTSLIVAGTLTAGALTVYLAYLSKFFKPVKDLASMTSAIAQTTVALERIQTILSADDIIQEHADPTEPGRLKGAITFEHVAFGYGDDAPVLRDVSFGIEPGQVVGIVGPTGSGKSTVLSLVPRFYNPTRGRVLIDGEDISTYKLASLRSQIGFVLQETVLFRGTIRENIAYGRPGATDEEVIAAAKIANADEFISRMPHGYDSPVGERGDTLSGGQRQRI 1188
            QWVANDLRIRIY+HLHRLSLRYYD+ K G+L+STI +DV T+QSFASSSTLDI+VD ITI+FMVG+MFWLDWDFTLIA+G TPFL+VF+F  KKAVKEVTR VRARQSE+++VVQ+GLGSVRA+KAFGRQDLE+A LEAASHATV AAL+ARQVKS+LSP++++VVA CT IVLWKGTSLIVAGT+TAGALTVYLAYL+KFFKPVKDLASMTSA+AQTTVALERIQ ILSADDII    D  +PGR+ G I F+ VAFGY +D  VLRDVSF I PGQVVGIVGPTGSGKSTVLSL+PRFY  T GR+LIDG+DI   KLA+LR QIGFVLQETVLFRGTIRENIAYGRPGATDEE+IAAAK+ANADEFISRMP+GYDS VGERGDTLSGGQRQRI
Sbjct:  100 QWVANDLRIRIYQHLHRLSLRYYDHAKIGSLISTIMTDVDTLQSFASSSTLDILVDFITIVFMVGIMFWLDWDFTLIALGVTPFLLVFIFRLKKAVKEVTRAVRARQSEMLSVVQQGLGSVRAIKAFGRQDLELARLEAASHATVGAALRARQVKSVLSPLISVVVAACTAIVLWKGTSLIVAGTMTAGALTVYLAYLAKFFKPVKDLASMTSAVAQTTVALERIQDILSADDIIGVSDDARDPGRVLGGIRFDRVAFGYDNDTSVLRDVSFEIRPGQVVGIVGPTGSGKSTVLSLIPRFYETTFGRILIDGQDIREMKLAALREQIGFVLQETVLFRGTIRENIAYGRPGATDEEIIAAAKVANADEFISRMPNGYDSLVGERGDTLSGGQRQRI 495          
BLAST of mRNA_P-wetherbeei_contig21032.1.1 vs. uniprot
Match: UPI001C20B950 (ABC transporter ATP-binding protein/permease n=1 Tax=Xenophilus sp. L33 TaxID=1747220 RepID=UPI001C20B950)

HSP 1 Score: 610 bits (1573), Expect = 3.580e-214
Identity = 317/397 (79.85%), Postives = 359/397 (90.43%), Query Frame = 1
Query:    1 QWVANDLRIRIYEHLHRLSLRYYDNVKTGALMSTITSDVATIQSFASSSTLDIVVDLITILFMVGLMFWLDWDFTLIAVGFTPFLVVFLFHFKKAVKEVTRTVRARQSEIVAVVQEGLGSVRAVKAFGRQDLEVAHLEAASHATVEAALKARQVKSLLSPMVNIVVAICTGIVLWKGTSLIVAGTLTAGALTVYLAYLSKFFKPVKDLASMTSAIAQTTVALERIQTILSADDIIQEHADPTEPGRLKGAITFEHVAFGYGDDAP-VLRDVSFGIEPGQVVGIVGPTGSGKSTVLSLVPRFYNPTRGRVLIDGEDISTYKLASLRSQIGFVLQETVLFRGTIRENIAYGRPGATDEEVIAAAKIANADEFISRMPHGYDSPVGERGDTLSGGQRQRI 1188
            QWVANDLR+RIYEHLHRLSL +YD  KTG LMSTITSDVAT+Q+FASSSTL I+VD++TI+FM+GLM WLDWDFTLIAV   PFL++F+F FKKAVK+VTR VR +QSEIVAVVQEGLGSVRA+KAFGRQDLEVAH+ AASHA+ EAAL+AR++KSLLSP+V IVVA+CTGIVLWKGT+LIVAGT+TAGALTVYLAYL+KFFKPVKDLASM S IAQTTVALERIQ IL AD+II+E  D  +PGR +G I FEHVAFGYG D P VLRDVSF IEPGQVVGIVGPTGSGKSTV+SL+PRFY+P+ GRVLIDG+DIS  KL +LRSQIGFVLQETVLFRG+I ENIAYG+PGAT EE++AAAK+ANADEFIS+M HGY+S VGERGDTLSGGQRQRI
Sbjct:  113 QWVANDLRLRIYEHLHRLSLAFYDGAKTGTLMSTITSDVATVQNFASSSTLGIMVDIVTIVFMLGLMIWLDWDFTLIAVAVMPFLILFVFRFKKAVKDVTRDVRIKQSEIVAVVQEGLGSVRAIKAFGRQDLEVAHMTAASHASTEAALRARKIKSLLSPVVAIVVALCTGIVLWKGTALIVAGTMTAGALTVYLAYLNKFFKPVKDLASMASTIAQTTVALERIQKILGADEIIREVPDAVDPGRARGEIRFEHVAFGYGADEPQVLRDVSFTIEPGQVVGIVGPTGSGKSTVVSLMPRFYDPSAGRVLIDGQDISKVKLTALRSQIGFVLQETVLFRGSIAENIAYGKPGATQEEIVAAAKLANADEFISKMQHGYESMVGERGDTLSGGQRQRI 509          
BLAST of mRNA_P-wetherbeei_contig21032.1.1 vs. uniprot
Match: UPI001BAB676D (ABC transporter ATP-binding protein/permease n=1 Tax=Rhodopseudomonas sp. SK50-23 TaxID=340268 RepID=UPI001BAB676D)

HSP 1 Score: 608 bits (1568), Expect = 9.330e-214
Identity = 315/396 (79.55%), Postives = 359/396 (90.66%), Query Frame = 1
Query:    1 QWVANDLRIRIYEHLHRLSLRYYDNVKTGALMSTITSDVATIQSFASSSTLDIVVDLITILFMVGLMFWLDWDFTLIAVGFTPFLVVFLFHFKKAVKEVTRTVRARQSEIVAVVQEGLGSVRAVKAFGRQDLEVAHLEAASHATVEAALKARQVKSLLSPMVNIVVAICTGIVLWKGTSLIVAGTLTAGALTVYLAYLSKFFKPVKDLASMTSAIAQTTVALERIQTILSADDIIQEHADPTEPGRLKGAITFEHVAFGYGDDAPVLRDVSFGIEPGQVVGIVGPTGSGKSTVLSLVPRFYNPTRGRVLIDGEDISTYKLASLRSQIGFVLQETVLFRGTIRENIAYGRPGATDEEVIAAAKIANADEFISRMPHGYDSPVGERGDTLSGGQRQRI 1188
            QWVANDLRIRIY HLHRLSLRYYD+ K+GAL+STIT+DV T+QSFASSSTLDI+VD+ITI FM+GLMFWLDWDFTLIA+  TPFL+VF+ H KKAVKEVTRTVR RQSEIVAVVQ+GLGSVR+V AFGRQDLE+A LEAASHATV+AA++AR+VKSLLSP+V IVVA CT IVLWKGTSLIVAGT+TAGALTVYLAYL++FFKPVKDLA+MTS+IAQTTVALERIQ IL+ADDII E  D  +PGR KG I+FE+V F Y ++AP+L  VSF IEPGQ+VGIVGPTGSGKSTVLSLVPRFY+ + GRV IDG D++ YKL++LRSQ+G+VLQETVLFRGTIRENIAYGRPGAT++E+I AAKIANA EFI RMPHGYDS VGERGDTLSGGQRQR+
Sbjct:  100 QWVANDLRIRIYAHLHRLSLRYYDHAKSGALISTITTDVTTLQSFASSSTLDILVDIITIFFMIGLMFWLDWDFTLIALAITPFLLVFVMHLKKAVKEVTRTVRQRQSEIVAVVQQGLGSVRSVTAFGRQDLELARLEAASHATVDAAMQARRVKSLLSPVVGIVVAFCTAIVLWKGTSLIVAGTMTAGALTVYLAYLAQFFKPVKDLAAMTSSIAQTTVALERIQKILAADDIIVEKPDAIDPGRAKGQISFENVHFAYEEEAPILNGVSFRIEPGQIVGIVGPTGSGKSTVLSLVPRFYDASSGRVTIDGIDVTDYKLSALRSQVGYVLQETVLFRGTIRENIAYGRPGATEDEIIEAAKIANAHEFIIRMPHGYDSMVGERGDTLSGGQRQRV 495          
BLAST of mRNA_P-wetherbeei_contig21032.1.1 vs. uniprot
Match: UPI001BDEE029 (ABC transporter ATP-binding protein/permease n=1 Tax=Bradyrhizobium sp. SRL28 TaxID=2836178 RepID=UPI001BDEE029)

HSP 1 Score: 604 bits (1557), Expect = 4.070e-212
Identity = 305/396 (77.02%), Postives = 361/396 (91.16%), Query Frame = 1
Query:    1 QWVANDLRIRIYEHLHRLSLRYYDNVKTGALMSTITSDVATIQSFASSSTLDIVVDLITILFMVGLMFWLDWDFTLIAVGFTPFLVVFLFHFKKAVKEVTRTVRARQSEIVAVVQEGLGSVRAVKAFGRQDLEVAHLEAASHATVEAALKARQVKSLLSPMVNIVVAICTGIVLWKGTSLIVAGTLTAGALTVYLAYLSKFFKPVKDLASMTSAIAQTTVALERIQTILSADDIIQEHADPTEPGRLKGAITFEHVAFGYGDDAPVLRDVSFGIEPGQVVGIVGPTGSGKSTVLSLVPRFYNPTRGRVLIDGEDISTYKLASLRSQIGFVLQETVLFRGTIRENIAYGRPGATDEEVIAAAKIANADEFISRMPHGYDSPVGERGDTLSGGQRQRI 1188
            QWVANDLR+RIY+HLHRLSLRYYD+ +TG L+STIT+DVATIQSFASSSTLDIV+DLITI+FMVGLMFWL+WDFTLIAV FTP L+VF+FH KKAVK+ TR VRARQS+++++VQ G+GS+R  KAFGRQDLE+AHLEAASHATV+AAL+AR +KSL+SP+V+IVVAICT +VLW+GTSLIVAGT+TAGALTVYLAYL +FFKPVKDLASMTS +AQTTVALERIQTILSAD++I+E ADP +PGR++GA+TF+ V FGYG D  VL +VSF IEPGQVVGIVGPTGSGKSTVLSL+PRFY+P  G V IDG D++ YKLA+LRSQIGFVLQ+T+LF GTI +NIAYGRP AT++E++AAA++ANADEFISRMP GYD+ VGE G+TLSGGQRQRI
Sbjct:  101 QWVANDLRLRIYDHLHRLSLRYYDHARTGVLVSTITTDVATIQSFASSSTLDIVIDLITIVFMVGLMFWLEWDFTLIAVAFTPVLLVFVFHLKKAVKQTTRVVRARQSDLLSIVQRGIGSIRVTKAFGRQDLEMAHLEAASHATVDAALRARLIKSLMSPVVSIVVAICTAVVLWQGTSLIVAGTMTAGALTVYLAYLKQFFKPVKDLASMTSTVAQTTVALERIQTILSADEVIKERADPVDPGRVRGAVTFDRVTFGYGVDQHVLHEVSFTIEPGQVVGIVGPTGSGKSTVLSLLPRFYDPMFGHVRIDGVDVADYKLAALRSQIGFVLQDTMLFPGTIGDNIAYGRPEATEDEIVAAARVANADEFISRMPLGYDAVVGEHGNTLSGGQRQRI 496          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21032.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1H5J1X6_9BRAD1.030e-25796.21ATP-binding cassette, subfamily B, MsbA n=3 Tax=Br... [more]
UPI001FFFEBAB5.530e-23285.10ABC transporter ATP-binding protein/permease n=3 T... [more]
A0A1Q5S9S7_9BRAD4.290e-22885.10ABC transporter n=9 Tax=Bradyrhizobium TaxID=374 R... [more]
A0A7G6U5X7_9BRAD7.210e-22382.07ABC transporter ATP-binding protein n=5 Tax=Tardip... [more]
A0A520FZJ0_9BURK8.570e-21780.81ABC transporter ATP-binding protein n=1 Tax=Variov... [more]
A0A3S0DS53_9BRAD1.780e-21680.81ABC transporter ATP-binding protein n=1 Tax=Bradyr... [more]
K8P0Q8_9BRAD2.530e-21681.06Uncharacterized protein n=1 Tax=Afipia clevelanden... [more]
UPI001C20B9503.580e-21479.85ABC transporter ATP-binding protein/permease n=1 T... [more]
UPI001BAB676D9.330e-21479.55ABC transporter ATP-binding protein/permease n=1 T... [more]
UPI001BDEE0294.070e-21277.02ABC transporter ATP-binding protein/permease n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig21032contigP-wetherbeei_contig21032:3..1190 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog522306.CAP2UW1_2784
PFAMsABC_membrane,ABC_tran
Model size1188
Max annot lvl28216|Betaproteobacteria
KEGG koko:K06147,ko:K18893
KEGG TC3.A.1,3.A.1.106,3.A.1.109,3.A.1.21
KEGG Pathwayko02010,map02010
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.71e-173
EggNOG OGsCOG1132@1|root,COG1132@2|Bacteria,1MUBM@1224|Proteobacteria,2VIAP@28216|Betaproteobacteria,1KPU9@119066|unclassified Betaproteobacteria
DescriptionABC transporter transmembrane region
Cds size1188
COG categoryV
BRITEko00000,ko00001,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186215.202106-CDS-P-wetherbeei_contig21032:2..11901683186215.202106-CDS-P-wetherbeei_contig21032:2..1190Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig21032 3..1190 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig21032.1.1prot_P-wetherbeei_contig21032.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig21032 3..1190 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig21032.1.1

>prot_P-wetherbeei_contig21032.1.1 ID=prot_P-wetherbeei_contig21032.1.1|Name=mRNA_P-wetherbeei_contig21032.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=396bp
QWVANDLRIRIYEHLHRLSLRYYDNVKTGALMSTITSDVATIQSFASSST
LDIVVDLITILFMVGLMFWLDWDFTLIAVGFTPFLVVFLFHFKKAVKEVT
RTVRARQSEIVAVVQEGLGSVRAVKAFGRQDLEVAHLEAASHATVEAALK
ARQVKSLLSPMVNIVVAICTGIVLWKGTSLIVAGTLTAGALTVYLAYLSK
FFKPVKDLASMTSAIAQTTVALERIQTILSADDIIQEHADPTEPGRLKGA
ITFEHVAFGYGDDAPVLRDVSFGIEPGQVVGIVGPTGSGKSTVLSLVPRF
YNPTRGRVLIDGEDISTYKLASLRSQIGFVLQETVLFRGTIRENIAYGRP
GATDEEVIAAAKIANADEFISRMPHGYDSPVGERGDTLSGGQRQRI
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mRNA from alignment at P-wetherbeei_contig21032:3..1190-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig21032.1.1 ID=mRNA_P-wetherbeei_contig21032.1.1|Name=mRNA_P-wetherbeei_contig21032.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1188bp|location=Sequence derived from alignment at P-wetherbeei_contig21032:3..1190- (Phaeothamnion wetherbeei SAG_119_79)
CAGTGGGTCGCAAACGACTTGCGTATTCGTATTTACGAGCATTTGCATCG CCTTTCGCTGCGCTACTATGACAACGTCAAGACTGGCGCGCTGATGTCCA CCATCACCAGCGATGTGGCGACGATCCAAAGCTTTGCGTCGTCATCAACG CTCGACATAGTCGTTGACCTGATCACCATCCTCTTCATGGTCGGGCTGAT GTTCTGGCTCGATTGGGATTTCACCCTGATCGCCGTCGGCTTCACGCCCT TCCTGGTGGTGTTTCTTTTTCATTTCAAGAAGGCGGTGAAGGAAGTCACG CGGACTGTCCGTGCACGACAAAGCGAGATCGTCGCAGTTGTCCAGGAGGG GCTCGGTTCTGTTCGCGCCGTCAAGGCCTTTGGAAGGCAGGATCTCGAAG TCGCCCATTTGGAGGCCGCGAGCCATGCGACCGTTGAGGCGGCGCTCAAG GCGCGGCAGGTGAAATCGCTGCTGTCGCCGATGGTCAATATCGTGGTGGC AATCTGTACGGGGATCGTGCTCTGGAAGGGTACTTCCCTGATCGTTGCAG GAACGCTGACGGCCGGAGCACTGACGGTGTATCTGGCCTATCTGTCGAAA TTTTTCAAACCGGTCAAAGACCTTGCAAGCATGACGAGCGCCATCGCACA GACGACGGTGGCTCTGGAGCGTATCCAAACTATCTTGTCCGCCGATGACA TCATCCAGGAGCACGCCGACCCCACGGAACCCGGCCGCCTCAAGGGCGCC ATCACCTTCGAGCATGTCGCCTTCGGCTACGGTGACGATGCCCCGGTGTT GCGCGACGTTTCGTTCGGTATCGAGCCCGGCCAAGTCGTGGGTATTGTCG GCCCAACGGGTTCCGGCAAGTCGACGGTGCTGAGCCTCGTTCCCCGATTT TACAATCCCACCCGCGGACGGGTGCTGATCGACGGTGAAGACATATCCAC GTACAAGCTCGCGTCGCTGCGTTCCCAGATCGGCTTCGTGCTGCAAGAAA CGGTGCTGTTTCGCGGAACGATTCGCGAAAACATTGCTTATGGACGCCCC GGCGCCACGGATGAAGAGGTCATCGCGGCCGCGAAAATTGCCAACGCGGA CGAGTTCATCAGTCGCATGCCGCACGGCTACGACTCCCCTGTCGGCGAGC GAGGCGACACATTGTCGGGCGGCCAGCGACAGCGCATC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig21032:3..1190-

>mRNA_P-wetherbeei_contig21032.1.1 ID=mRNA_P-wetherbeei_contig21032.1.1|Name=mRNA_P-wetherbeei_contig21032.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1188bp|location=Sequence derived from alignment at P-wetherbeei_contig21032:3..1190- (Phaeothamnion wetherbeei SAG_119_79)
CAGTGGGTCGCAAACGACTTGCGTATTCGTATTTACGAGCATTTGCATCG
CCTTTCGCTGCGCTACTATGACAACGTCAAGACTGGCGCGCTGATGTCCA
CCATCACCAGCGATGTGGCGACGATCCAAAGCTTTGCGTCGTCATCAACG
CTCGACATAGTCGTTGACCTGATCACCATCCTCTTCATGGTCGGGCTGAT
GTTCTGGCTCGATTGGGATTTCACCCTGATCGCCGTCGGCTTCACGCCCT
TCCTGGTGGTGTTTCTTTTTCATTTCAAGAAGGCGGTGAAGGAAGTCACG
CGGACTGTCCGTGCACGACAAAGCGAGATCGTCGCAGTTGTCCAGGAGGG
GCTCGGTTCTGTTCGCGCCGTCAAGGCCTTTGGAAGGCAGGATCTCGAAG
TCGCCCATTTGGAGGCCGCGAGCCATGCGACCGTTGAGGCGGCGCTCAAG
GCGCGGCAGGTGAAATCGCTGCTGTCGCCGATGGTCAATATCGTGGTGGC
AATCTGTACGGGGATCGTGCTCTGGAAGGGTACTTCCCTGATCGTTGCAG
GAACGCTGACGGCCGGAGCACTGACGGTGTATCTGGCCTATCTGTCGAAA
TTTTTCAAACCGGTCAAAGACCTTGCAAGCATGACGAGCGCCATCGCACA
GACGACGGTGGCTCTGGAGCGTATCCAAACTATCTTGTCCGCCGATGACA
TCATCCAGGAGCACGCCGACCCCACGGAACCCGGCCGCCTCAAGGGCGCC
ATCACCTTCGAGCATGTCGCCTTCGGCTACGGTGACGATGCCCCGGTGTT
GCGCGACGTTTCGTTCGGTATCGAGCCCGGCCAAGTCGTGGGTATTGTCG
GCCCAACGGGTTCCGGCAAGTCGACGGTGCTGAGCCTCGTTCCCCGATTT
TACAATCCCACCCGCGGACGGGTGCTGATCGACGGTGAAGACATATCCAC
GTACAAGCTCGCGTCGCTGCGTTCCCAGATCGGCTTCGTGCTGCAAGAAA
CGGTGCTGTTTCGCGGAACGATTCGCGAAAACATTGCTTATGGACGCCCC
GGCGCCACGGATGAAGAGGTCATCGCGGCCGCGAAAATTGCCAACGCGGA
CGAGTTCATCAGTCGCATGCCGCACGGCTACGACTCCCCTGTCGGCGAGC
GAGGCGACACATTGTCGGGCGGCCAGCGACAGCGCATC
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