mRNA_P-wetherbeei_contig21024.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig21024.1.1 vs. uniprot
Match: D7FRD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRD6_ECTSI) HSP 1 Score: 142 bits (359), Expect = 2.620e-34 Identity = 107/295 (36.27%), Postives = 145/295 (49.15%), Query Frame = -1
Query: 61 GCGRDGRLGLGD-FASRWEPALVEALAGHVVTLVAAGHAHSLAAVAAGPEAAVWVWGRGAHGRLGCGDLKNRTLPTRL--MQWPPGVYIGDGSGGGGSCGNSGQGAGNAXXXXXXXXXXXXXXXXXXXXXGADGRNHKAASAGHETDG--AVTVAGAALGGAHTLLLLLRPVQRCMRHPHGRVSTVLAWGCGTGGQLGVGAAVAALALPTRVPVPRHHVVTSLAAGKAHSLAVTASGELLAWGKGWLGELGHSQARDFRVAPAAVVYPGSDRHLFVAAAAGDRHSVALALETRPP 930
G G+ G+LGLG+ R P ++ ALAG V V AG AH+L G V+ WG G GRLG GD K+R P R+ + P IG G+ A + G + H + G V ALGGAH+++L R + +P G S AWG G GQLG+G V + +P+++ + ++TS+ AGK+ SLA G++ AWGKGW G+LG A+D RVAP V +PG RHL V AAG+RH+ AL L+ PP
Sbjct: 247 GSGQRGQLGLGEGVVDRRTPHVIRALAGLPVRSVVAGAAHALCVTLDGK---VFSWGCGQDGRLGHGDYKDRWEPCRVEGVGSDPVALIGAGA------------AHSMAVSLPQSVHLWGRGAHGRLGTGDNKCRHAPVRLKNWPPGFPGCVVQDVALGGAHSIVLAHRSAPTTLANPWGAESLAYAWGYGYCGQLGLGRRVGEIKMPSKIAFDKKELMTSIVAGKSFSLATNVQGQMFAWGKGWAGQLGLGIAKDSRVAPTRVDFPGVGRHLVVKMAAGERHASALTLDCSPP 526
BLAST of mRNA_P-wetherbeei_contig21024.1.1 vs. uniprot
Match: A0A8J2S3N5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S3N5_9STRA) HSP 1 Score: 135 bits (341), Expect = 7.390e-32 Identity = 117/302 (38.74%), Postives = 148/302 (49.01%), Query Frame = -1
Query: 73 GCGRDGRLGLGDFASRWEPALVEALAGHVVTLVAAGHAHSLAAVAAGPEAAVWVWGRGAHGRLGCGDLKNRTLPTRLMQW------PPGVYIGDGSGGGGSCGNSGQGAGNAXXXXXXXXXXXXXXXXXXXXXGADGRNHKAASAGHETDGAVT----------VAGAALGGAHTLLLLLRPVQRCMRHPHGRVSTVLAWGCGTGGQLGVGAAVAALALPTRVPVPRHHVVTSLAAGKAHSLAVTASGELLAWGKGWLGELGHSQARDFRVAPAAVVYPGSDRHLFVAAAAGDRHSVALALE 930
G G G LGLG R P ++AL V +A G AH LA A AA++VWGRG GRLG GD ++R P RL+ + P V GD ++ GA GR + +T V V GAALGGAH+L+L + + +P GR V AWG G GQ+G + ALPTRV +PR+ VV +A GKAHSLAVTA G+L AWGKGW GELG R+ R P V S +H F+ AAGDRH++A+AL+
Sbjct: 323 GTGVYGELGLGSTRQRAIPTQMKAL-NRRVHAIACGRAHVLALCA--KPAALFVWGRGRDGRLGHGDYEDRDEPERLVFFDERKLAPRIVAAGDA---------------HSLVVVDAAQGATAPGGVYAWGRGAHGRLGLGRTLNKKTPQNVQKWPSCFQGMHVIGAALGGAHSLVLAEKAIPASGANPWGRQRHVYAWGYGGNGQIG-DECMTDRALPTRVKLPRNEVVQQVACGKAHSLAVTAHGDLYAWGKGWRGELGLGDDRN-RCGPEKV----SGKHQFLKVAAGDRHTLAIALK 600
BLAST of mRNA_P-wetherbeei_contig21024.1.1 vs. uniprot
Match: A0A836C846_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C846_9STRA) HSP 1 Score: 127 bits (320), Expect = 3.730e-29 Identity = 103/249 (41.37%), Postives = 121/249 (48.59%), Query Frame = -1
Query: 223 GCGRDGRLGLGDFASRWEPALVEALAGHVVTLVAAGHAHSLAAVAAGPE--------AAVWVWGRGAHGRLGCGDLKNRTLPTRLMQ--WPPGVYIGDGSGGGGSCGNSGQGAGNAXXXXXXXXXXXXXXXXXXXXXGADGRNHKAASAGHETDGAVTVAGAALGGAHTLLLLLR--PVQRCMRHPHGRVSTVLAWGCGTGGQLGVGAAVAALALPTRVPVPRHH-VVTSLAAGKAHSLAVTASGELLA 930
G G+DGRLG GD+ R EPA V ALAG V AAG AHSLA A G AAVW+WGRGAHGRLG GD +NR P L + WP G + ++ AGN AA + G + + ALGGAHTLLL R P + P R S +LAWG G GQLGVG VA + P RV + ++T +AAGKAHSLA A G L A
Sbjct: 382 GAGKDGRLGHGDYKDRCEPAAVAALAGLRVLSAAAGAAHSLAITAPGERRQQQAAGAAAVWLWGRGAHGRLGLGDRRNRHTPALLQRRAWPVGCHE-----------HTPIKAGNQTA---------------------------AAKCDQDNLGQLRTSSGALGGAHTLLLCERSAPWGKTRACPWARTSVILAWGFGGNGQLGVGEWVAEVLTPRRVDFNKGTPLLTDIAAGKAHSLACCAQGRLYA 592
BLAST of mRNA_P-wetherbeei_contig21024.1.1 vs. uniprot
Match: A0A6H5J9Y8_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Y8_9PHAE) HSP 1 Score: 116 bits (290), Expect = 3.770e-25 Identity = 89/258 (34.50%), Postives = 123/258 (47.67%), Query Frame = -1
Query: 25 VWVWGRGAHGRLGCGDLKNRTLPTRL--MQWPPGVYIGDGSGGGGSCGNSGQGAGNAXXXXXXXXXXXXXXXXXXXXXGADGRNHKAASAGHETDG--AVTVAGAALGGAHTLLLLLRPVQRCMRHPHGRVSTVLAWGCGTGGQLGVGAAVAA--LALPTRVPVPRHHVVTSLAAGKAHSLAVTASGELLAWGKGWLGELGHSQARDFRVAPAAVVYPGSDRHLFVAAAAGDRHSVALALE-TRPPHSWAQYRRHEEL 777
V+ WG G GRLG GD K+R P R+ + P IG G+ A + G + H + G V ALGGAH+++L R + +P G S AWG G GQLG+G V A + LP P ++ S+ AGK+ SLA G++ AWGKGW G+LG A+D RVAP V +PG RHL V AAG+RH+ AL L+ + PP W + ++ +++
Sbjct: 373 VFSWGCGQDGRLGHGDYKDRWEPCRVEGVGSDPVALIGAGA------------AHSMAVSLPQSVHLWGRGAHGRLGTGDNKCRHAPVRLKNWPPGFPGCVVKDVALGGAHSIVLAHRSAPTTLANPWGTESLAYAWGYGYCGQLGLGRRVGACWVKLPNGCTRPLKELIMSIVAGKSFSLAANVQGQMFAWGKGWAGQLGLGIAKDSRVAPTRVEFPGVGRHLVVKMAAGERHASALTLDCSPPPRGWEKDKQWKKV 618
BLAST of mRNA_P-wetherbeei_contig21024.1.1 vs. uniprot
Match: F0Y2K8_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2K8_AURAN) HSP 1 Score: 109 bits (272), Expect = 1.400e-24 Identity = 100/274 (36.50%), Postives = 123/274 (44.89%), Query Frame = -1
Query: 118 RWEPALVEALAGHVVTLVAAGHAHSLAAVAAGPEA--AVWVWGRGAHGRLGCGDLKNRTLPTRLMQWPPG------VYIGDGSGGGGSCGNSGQGAGNAXXXXXXXXXXXXXXXXXXXXXGADGRNHKAASAGHETDGAVT----------VAGAALGGAHTLLLLLRPVQRCMRHPHGRVSTVLAWGCGTGGQLGVGAAVAALALPTRVPVPRHHVVTSLAAGKAHSLAVTASGELLAWGKGWLGELGHSQARDFRVAPAAVVYPGSDRHLFV 885
R P LV ALA VT +AAG AH LA A A A++ WG G GRLG D +R PT + + V GD ++ GA GR + VT V GAALGGAH+L+L V + +P G + +WG G GQLG A V + +P +V +P+ VV +A GKAHSLA+T G+L AWGKGW GELGH AR RVAP V P H FV
Sbjct: 2 RAAPTLVPALARRCVTSIAAGKAHVLALCATQGHARSALYAWGAGRDGRLGHDDYAHRFEPTAVAFFQVARLRVRLVAAGDA---------------HSLAVADATEDARERPGVYTWGRGAHGRLGLRRTLNKRRPHLVTEWPPSFRGCRVVGAALGGAHSLVLAEEAVPPGLVNPWGVRRAIYSWGYGANGQLGTDAVVDS-PVPRKVKMPKFEVVAQIACGKAHSLALTVHGDLYAWGKGWQGELGHGDAR-LRVAPKKVDSP----HQFV 254
BLAST of mRNA_P-wetherbeei_contig21024.1.1 vs. uniprot
Match: A0A7S1U7D9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U7D9_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 5.940e-18 Identity = 52/101 (51.49%), Postives = 67/101 (66.34%), Query Frame = -1
Query: 193 VAGAALGGAHTLLLLLRPVQRCMRHPHGRVSTVLAWGCGTGGQLG---VGAAVAALALPTRVPVPRHHVVTSLAAGKAHSLAVTASGELLAWGKGWLGELG 486
+ G A GGAH+LLL+ P RC+R+ G + + AWG G GQLG VG A+ P V +P H+VT +AAGKAHS+A+T GE+ AWGKGW+GELG
Sbjct: 227 IRGIAAGGAHSLLLIWLPRPRCIRYHWGVETRIFAWGLGLNGQLGCSWVGLRTAST--PQPVKMPPWHIVTQIAAGKAHSMALTNRGEVFAWGKGWVGELG 325
BLAST of mRNA_P-wetherbeei_contig21024.1.1 vs. uniprot
Match: UPI000373ABD3 (RCC1 domain-containing protein n=4 Tax=Salinispora arenicola TaxID=168697 RepID=UPI000373ABD3) HSP 1 Score: 85.1 bits (209), Expect = 1.060e-14 Identity = 88/294 (29.93%), Postives = 120/294 (40.82%), Query Frame = -1
Query: 58 GRLGLGDFASRWEPALVEALAGHVVTLVAAGHAHSLAAVAAGPEAAVWVWGRGAHGRLGCGDLKNRTLPTRLMQWPPGVYIGDGSGGGGSCGNSGQGAGNAXXXXXXXXXXXXXXXXXXXXXGADGR-NHKAASAGHETDGAVTVAGAALGGAHTLLLLLRPVQRCMRHPHGRVSTVLAWGCGTGGQLGVGAAVAALALPTRVPVPRHHVVTSLAAGKAHSLAVTASGELLAWGKGWLGELGHSQARDFRVAPAAVVYPGSDRHLFVAAAAGDRHSVALA-------LETRPPH 915
G+LG G R P V+ AG +T VAAG HSLA + G V WG + G+LG + + P + P G I + AG DG N + + T+ A GG H+L + VLAWG T GQLG G+ + + P V VP +T++AAG+ HSLAVT++GE+LAWG G+LG + +P AV P A A GD HS+A+ L+ PP+
Sbjct: 229 GQLGDGTTTRRRTPVAVDVPAGTTITAVAAGQGHSLAVTSTGD---VLAWGDNSSGQLGDATTTDSSTPVAVGV-PAGTTI------------TAVAAGGLHSLAVTSAGTMLAWGDNGSGQLGDGTTNSSSIPVAVDVPAGTTITAVAAGGRHSLAVT-------------SAGDVLAWGDNTAGQLGDGSTTHS-STPVTVDVPAGTTITAVAAGQGHSLAVTSTGEVLAWGDNTFGQLGDGSTTNSS-SPVAVNMPAGTT--ITALAGGDFHSLAIVPPTSTTTLQASPPN 489
BLAST of mRNA_P-wetherbeei_contig21024.1.1 vs. uniprot
Match: A0A7S0EUL9_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EUL9_9EUKA) HSP 1 Score: 83.2 bits (204), Expect = 2.520e-14 Identity = 105/332 (31.63%), Postives = 130/332 (39.16%), Query Frame = -1
Query: 7 GCGRDGRLGLGDFASRWEPALVEALAGHVVTLVAAGHAHSLAAVAAGPEAAVWVWGRGAHGRLGCGDLKNRTLPTRLM-------------QWPPGVYIGDG---SGGGGSCGNSGQGAGNAXXXXXXXXXXXXXXXXXXXXXGADGRNHKAASAGHETDGAVTVAGAALGGAHTLLLLLRPVQRCMRHPHGRVSTVLAWGCGTGGQLGVGAAVAALALPTRVP--VPRHHVVTSLAAGKAHSLAVTASGELLAWGKGWLGELGHSQARD----FRVAPAAVVYPGSDRH--LFVAAAAGDRHSVALALETRPPHSWAQYRRHEELAAAGLG 930
G G +G+LG GD ASR P L+E L+ V +A G HSLAA G A++ WG G GRLG + + R LP + +W DG S GGG G G G + AA +G V V G A G HTL L + +WG G G+LG G L LPT + V VVT LAAG HSLAVT G LL WG G G LGH + A V P VA +AG+ H +A+ + ++W Y R L G
Sbjct: 60 GYGGEGQLGQGDEASRAAPTLIEELSHETVACIAVGDDHSLAATEGG---ALYSWGYGIDGRLGLAEAEGRLLPELVSALGGVRVTGVAAGRWHSLARTADGALYSWGGGGFGRLGHGDEASLRLPTLV----------------------AALSG------VHVTGMAAGAHHTLALT-------------DAGRLYSWGLGGNGRLGHGDTEPRL-LPTPIASLVQSGVVVTCLAAGAHHSLAVTDQGALLTWGDGGGGRLGHGDINALVGVYIEADCLVPTPVEAMRGLCVVAVSAGEEHCLAVTRDGAA-YTWGDYGRESTLGVPRHG 345
BLAST of mRNA_P-wetherbeei_contig21024.1.1 vs. uniprot
Match: UPI0009EC6D60 (Ig-like domain repeat protein n=1 Tax=Salinispora fenicalii TaxID=1137263 RepID=UPI0009EC6D60) HSP 1 Score: 79.7 bits (195), Expect = 6.530e-13 Identity = 85/280 (30.36%), Postives = 115/280 (41.07%), Query Frame = -1
Query: 79 GRLGLGDFASRWEPALVEALAGHVVTLVAAGHAHSLAAVAAGPEAAVWVWGRGAHGRLGCGDLKNRTLPTRLMQWPPGVYIGDGSGGGGSCGNSGQGAGNAXXXXXXXXXXXXXXXXXXXXXGADGRN-HKAASAGHETDGAVTVAGAALGGAHTLLLLLRPVQRCMRHPHGRVSTVLAWGCGTGGQLGVGAAVAALALPTRVPVPRHHVVTSLAAGKAHSLAVTASGELLAWGKGWLGELGHSQARDFRVAPAAVVYPGSDRHLFVAAAAGDRHSVALA 915
G+LG G R P V G +T VAAG HSLA + G V WG + G+LG G L + + P + P G I + AG DG K+ + T+ + G HTL + T+LAWG GQLG G+ + P V +P +T++AAG H+LAVT++G +LAWG LG++G R P AV P AAAAG+RHS+A+A
Sbjct: 197 GQLGDGTTTRRSTPVAVNLPTGTTITAVAAGDRHSLALTSTGT---VLAWGDNSAGQLGDGTLTDSSTPV-AVDLPAGTTI------------TTVAAGAYHSLALTSADTLLAWGYNIFGQLGDGTTTDKSTPVAVDLPAGTTITTVSGGARHTLAVT-------------SADTLLAWGHNNFGQLGDGSTTDSNT-PVAVNLPTGTTITTVAAGAFHTLAVTSTGTMLAWGYNALGQVGDGTTATRRRTPVAVDLPAGTT--ITAAAAGNRHSLAIA 444
BLAST of mRNA_P-wetherbeei_contig21024.1.1 vs. uniprot
Match: UPI001E52A7CD (Ig-like domain repeat protein n=1 Tax=Salinispora pacifica TaxID=351187 RepID=UPI001E52A7CD) HSP 1 Score: 76.6 bits (187), Expect = 6.800e-12 Identity = 81/279 (29.03%), Postives = 111/279 (39.78%), Query Frame = -1
Query: 82 DGRLGLGDFASRWEPALVEALAGHVVTLVAAGHAHSLAAVAAGPEAAVWVWGRGAHGRLGCGDLKNRTLPTRLMQWPPGVYIGDGSGGGGSCGNSGQGAGNAXXXXXXXXXXXXXXXXXXXXXGADGRNHKAASAGHETDGAVTVAGAALGGAHTLLLLLRPVQRCMRHPHGRVSTVLAWGCGTGGQLGVGAAVAALALPTRVPVPRHHVVTSLAAGKAHSLAVTASGELLAWGKGWLGELGHSQARDFRVAPAAVVYPGSDRHLFVAAAAGDRHSVAL 918
DG+LG G SR P V G +T +AAG HSLA + G V WG + G+LG G NR+ P + PPG + + G + G ++ V V A G H L L T+LAWG GGQLG G + + P V +P +T++AAG HSLA+T++G +LAWG + G+LG + R P V P A G+ HS+A+
Sbjct: 119 DGQLGDGTTTSRSTPVTVNLPPGTTITAIAAGDEHSLALTSTGT---VLAWGDNSEGQLGDGTTTNRSTPV-TVNLPPGTEV-----------TAIAGGDDHSLALTSADTVLAWGENNDGELGDGTTTDRSTPITVNLPVGVAVTAIAAHGDHNLALT-------------STDTMLAWGANFGGQLGDGTTTSK-STPVNVNLPAGVTITAIAAGDEHSLALTSTGTVLAWGDNFDGQLGDGTNTN-RSTPVTVNLPTGVT--ITAITGGNLHSLAV 365 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21024.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig21024.1.1 >prot_P-wetherbeei_contig21024.1.1 ID=prot_P-wetherbeei_contig21024.1.1|Name=mRNA_P-wetherbeei_contig21024.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=310bp AVAKASCRQLLVPPVLCPAVRRPRLQRQRDRMAVAGGGGHEEVAVRARVDback to top mRNA from alignment at P-wetherbeei_contig21024:259..1190+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig21024.1.1 ID=mRNA_P-wetherbeei_contig21024.1.1|Name=mRNA_P-wetherbeei_contig21024.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=932bp|location=Sequence derived from alignment at P-wetherbeei_contig21024:259..1190+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig21024:259..1190+ >mRNA_P-wetherbeei_contig21024.1.1 ID=mRNA_P-wetherbeei_contig21024.1.1|Name=mRNA_P-wetherbeei_contig21024.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=930bp|location=Sequence derived from alignment at P-wetherbeei_contig21024:259..1190+ (Phaeothamnion wetherbeei SAG_119_79)back to top |