mRNA_P-wetherbeei_contig2102.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig2102.1.1
Unique NamemRNA_P-wetherbeei_contig2102.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig2102.1.1 vs. uniprot
Match: A0A835YUA9_9STRA (Anticodon-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUA9_9STRA)

HSP 1 Score: 407 bits (1047), Expect = 2.890e-139
Identity = 215/341 (63.05%), Postives = 256/341 (75.07%), Query Frame = 1
Query:   79 VGRNPSGIKNKIKRSVEYAKHKAEKSKAKKEQRQHREEEVRELGEEALPKRAPRTLESTREAEPTAVTPEDHEVFADEAEDEFALFFSNEKRPKIMLTTRPRPSQELFLFVGDLMNMLPNAFYYPRKSYNVKQICEAASGRDFTHVVVLSEKAKACNGMLVSVLPDGPTAAFKVSNVITSQDISHHGKVSNHRPEIILNNFNTRLGHRVGRFLGSLFPHEPQFKGRQVVTFHNQRDFVFVRHHRYIFS--------------EGNGGGPGGNSSGSGGRV-----------AAKTRLQELGPRFTIKLKWLQEGTFDTQFGEYEWIHKRKQMDTTRRKFHL 1026
            VG NP+ IKNKIKRS  Y K K  K+K KK++R+ R+ E   LG+E   K+  RTL++TREA+ T V P+D EV ADEA DEFA FF+NE  PKIM+TTRPRPS ELF+F+ DLM MLPNAF+YPRKS  VKQ+C+  + + FTH+ VLSEK+K CNG+LV+VLP GPTA FKVSNV TS+DI + G VS H+PE+ILNNFNTRLGHRVGRFLGS+FPHEP F GRQVVTFHNQRDF+FVRHHRY+F               EG+ G  GG   G G +            A +TRLQELGPRFT+K++WLQEGTFDT+ GEYEWIHKRK+MDT+RRKFHL
Sbjct:    2 VGVNPANIKNKIKRSEVYQKQKEAKAKDKKDRRK-RDVEAAALGDEVPVKKVQRTLDNTREADETVVAPDDEEVEADEAGDEFARFFNNETTPKIMITTRPRPSAELFMFIRDLMQMLPNAFFYPRKSATVKQLCQWCNNKKFTHLFVLSEKSKVCNGLLVAVLPAGPTAFFKVSNVKTSEDIHNRGTVSPHQPELILNNFNTRLGHRVGRFLGSVFPHEPDFNGRQVVTFHNQRDFIFVRHHRYVFEGNELEAAAAAEVLDEGDEGQNGGAGEGGGHKKKVATLKGKDGSATRTRLQELGPRFTLKMRWLQEGTFDTECGEYEWIHKRKEMDTSRRKFHL 341          
BLAST of mRNA_P-wetherbeei_contig2102.1.1 vs. uniprot
Match: D8LJM9_ECTSI (Brix domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJM9_ECTSI)

HSP 1 Score: 401 bits (1031), Expect = 2.370e-137
Identity = 203/309 (65.70%), Postives = 240/309 (77.67%), Query Frame = 1
Query:  100 IKNKIKRSVEYAKHKAEKSKAKKEQRQHREEEVRELGEEALPKRAPRTLESTREAEPTAVTPEDHEVFADEAEDEFALFFSNEKRPKIMLTTRPRPSQELFLFVGDLMNMLPNAFYYPRKSYNVKQICEAASGRDFTHVVVLSEKAKACNGMLVSVLPDGPTAAFKVSNVITSQDISHHGKVSNHRPEIILNNFNTRLGHRVGRFLGSLFPHEPQFKGRQVVTFHNQRDFVFVRHHRYIFSEGNGGGPGGNSSGSGGRVAAKTRLQELGPRFTIKLKWLQEGTFDTQFGEYEWIHKRKQMDTTRRKFHL 1026
            I NK KR+  Y K K  K   +K++      E +ELGEEA PK+ P+TLESTR+ + T V P D EVF DEAEDEFA FFSNE+ PKIM+TTRPRPS  LF FV DLM M+PNAF+YPRKS+ VKQIC+ A  + FTH+ V+SE+ K CNG++VSVLP GPTA FKVSNVI S ++ +HGKV+ H+PEIILNNFNTRLGHRVGRFLGS FPHEP+F GRQVVTFHNQRD++FVR HRYIF+EG          G G     + RLQELGPRFT+K++WLQEGTFDTQ+GEYEWIHKRK+MD+TRR FHL
Sbjct:    8 IGNKAKRTELYRKQKGNKKAEQKDRXXXXXXEAQELGEEAPPKQKPKTLESTRDPDRTVVKPADDEVFRDEAEDEFARFFSNEQTPKIMITTRPRPSGNLFHFVQDLMRMIPNAFFYPRKSFTVKQICQWADNKKFTHLFVISERLKICNGLIVSVLPHGPTAFFKVSNVIPSTEVFNHGKVTAHQPEIILNNFNTRLGHRVGRFLGSFFPHEPEFNGRQVVTFHNQRDYIFVRFHRYIFAEG---------KGEGDTKKTRARLQELGPRFTLKMRWLQEGTFDTQYGEYEWIHKRKEMDSTRRTFHL 307          
BLAST of mRNA_P-wetherbeei_contig2102.1.1 vs. uniprot
Match: A0A6U3UYI3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3UYI3_9STRA)

HSP 1 Score: 395 bits (1015), Expect = 2.660e-134
Identity = 206/328 (62.80%), Postives = 242/328 (73.78%), Query Frame = 1
Query:   79 VGRNPSGIKNKIKRSVEYAKHKAEKSKAKKEQRQHREEEVRELGEEALP-KRAPRTLESTREAEPTAVTPEDHEVFADEAEDEFALFFSNEKRPKIMLTTRPRPSQELFLFVGDLMNMLPNAFYYPRKSYNVKQICEAASGRDFTHVVVLSEKAKACNGMLVSVL---PD--------GPTAAFKVSNVITSQDISHHGKVSNHRPEIILNNFNTRLGHRVGRFLGSLFPHEPQFKGRQVVTFHNQRDFVFVRHHRYIFSEGNGGGPGGNSSGSGGRVAAKTRLQELGPRFTIKLKWLQEGTFDTQFGEYEWIHKRKQMDTTRRKFHL 1026
            V +NP GI+NK+KRS  Y ++  EK   K+E R  R +E  ELGE+A   K+ PRTL++TRE E T V P+D EV ADE EDEFA +FS+E RPKI+LTTRP PS ELF F+GDLM   P  FYYPRKSY++K IC  A  RDFTH++VLSEK+K CNGM++S L   PD        GPTA FKVSNVI S D+ +HG  S+H PE++LN F TRLGHR GRFLGSLFPH  QFKGRQV TFHNQRDF+FVRHHRY+F EG        ++    +   K RLQELGPRFT+K+KWLQEGTFDTQFGEYEW HKRK+MDTTRRKFHL
Sbjct:   27 VTKNPGGIRNKLKRSEMYGRYLLEKKAKKRELRLQRSKEAEELGEDAQHVKQTPRTLDNTREVEQTLVRPDDEEVMADEMEDEFAPYFSDEIRPKILLTTRPMPSGELFHFIGDLMRFFPQLFYYPRKSYSIKDICRYAINRDFTHLMVLSEKSKVCNGMIISHLRPSPDHVGGNARGGPTAFFKVSNVIKSTDVPNHGNASSHVPELVLNGFGTRLGHRAGRFLGSLFPHNAQFKGRQVATFHNQRDFIFVRHHRYVFEEGK------ETNKETKKPKTKARLQELGPRFTLKMKWLQEGTFDTQFGEYEWFHKRKEMDTTRRKFHL 348          
BLAST of mRNA_P-wetherbeei_contig2102.1.1 vs. uniprot
Match: A0A4D9CX49_9STRA (Brix domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CX49_9STRA)

HSP 1 Score: 394 bits (1013), Expect = 2.680e-134
Identity = 207/327 (63.30%), Postives = 248/327 (75.84%), Query Frame = 1
Query:   79 VGRNPSGIKNKIKRSVEYAKHKAEKSKAKKEQRQHREEEVRELGEEALPKRAPRTLESTREAEPTAVTPEDHEVFADEAEDEFALFFSNEKRPKIMLTTRPRPSQELFLFVGDLMNMLPNAFYYPRKSYNVKQICEAASGRDFTHVVVLSEKAKACNGMLVSVLPDGPTAAFKVSNVITSQDISHHGKVSNHRPEIILNNFNTRLGHRVGRFLGSLFPHEPQFKGRQVVTFHNQRDFVFVRHHRYIFSEGNGGG-PGGN------SSGSGGRVAA----KTRLQELGPRFTIKLKWLQEGTFDTQFGEYEWIHKRKQMDTTRRKFHL 1026
            V +  S I+N+ KR   +AK KAEK K KK +R  R+ E  ELG+EA PK+ PRTLE+TRE + T V P+D EV ADEAEDEF  +FS ++ PKI++TTRPRPS+ELF FVGDLM ++PNAF+YPRKS+ VK IC+ A    FTHV +LSEK K CNG+LVS LP GPT  FKVSNV     I+HHG+ + H PE+ILNNFNTRLGHRVGRFLGS FPH P+F+GRQVVTFHNQRDF+FVRHHRY+F E      P  N      S+G G +  A    + RLQELGPRFT+KL+WLQEGTFDT+FGEYEW+HKRK+MDTTRR+FHL
Sbjct:    2 VKKEVSRIRNRCKRREVHAKVKAEKKKVKKSERTKRQREALELGDEAPPKQVPRTLENTREVDETIVQPDDLEVVADEAEDEFQPYFSGKEIPKILITTRPRPSRELFHFVGDLMQVIPNAFFYPRKSFEVKAICKHAEESGFTHVFILSEKYKVCNGLLVSHLPCGPTVFFKVSNVTPGAKIAHHGQPTAHVPELILNNFNTRLGHRVGRFLGSFFPHAPEFRGRQVVTFHNQRDFLFVRHHRYVFDEKKAKSVPEINNPKKRKSAGDGSKAIAAGGIRARLQELGPRFTLKLRWLQEGTFDTKFGEYEWLHKRKEMDTTRRRFHL 328          
BLAST of mRNA_P-wetherbeei_contig2102.1.1 vs. uniprot
Match: A0A7S2S9M3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S9M3_9STRA)

HSP 1 Score: 383 bits (983), Expect = 2.040e-129
Identity = 199/333 (59.76%), Postives = 240/333 (72.07%), Query Frame = 1
Query:   70 TMAVGRNPSGIKNKIKRSVEYAKHKAEKSKAKKEQRQHREEEVRELGEEAL-PKRAPRTLESTREAEPTAVTPEDHEVFADEAEDEFALFFSNEKRPKIMLTTRPRPSQELFLFVGDLMNMLPNAFYYPRKSYNVKQICEAASGRDFTHVVVLSEKAKACNGMLVS----------------VLPDGPTAAFKVSNVITSQDISHHGKVSNHRPEIILNNFNTRLGHRVGRFLGSLFPHEPQFKGRQVVTFHNQRDFVFVRHHRYIFSEGNGGGPGGNSSGSGGRVAAKTRLQELGPRFTIKLKWLQEGTFDTQFGEYEWIHKRKQMDTTRRK 1017
            T  V  NP  IKNK+KRS  Y K+  EK   KKE+R  R+++  ELGE+A   K+ PRTLES RE E T V P+D E+ ADEAEDEFA +FS+E R KI++TTRPRPS ELF F+GDLM   P  +YYPR+S++VK IC  A+ R+FTH++VLSEK+K CNGM++S                 +  GPTA FKVSNVI S D+ HHG  ++H PE++LN F TRLGHR GRFLGSLFPH  QF+GRQV TFHNQRD++FVRHHRYIF EGN      N +   G+   K RLQELGPRFT+KL+W+QEGTFDTQ GEYEW HKRK+MDTTRRK
Sbjct:   24 TQKVRANPGKIKNKLKRSEMYGKYLLEKKAMKKEKRLARDKKAEELGEDAQHDKQVPRTLESAREMEQTMVRPDDDEIVADEAEDEFAKYFSDEVRAKILVTTRPRPSAELFHFIGDLMRFFPQLYYYPRRSFSVKDICAYATNREFTHLMVLSEKSKVCNGMVISHLRPTRAASGGEGDEQTMQAGPTAFFKVSNVIKSNDVPHHGSATSHVPELVLNGFGTRLGHRAGRFLGSLFPHNAQFQGRQVATFHNQRDYIFVRHHRYIFEEGN------NVNKETGKQRTKARLQELGPRFTLKLRWIQEGTFDTQHGEYEWFHKRKEMDTTRRK 350          
BLAST of mRNA_P-wetherbeei_contig2102.1.1 vs. uniprot
Match: K0RZU9_THAOC (Brix domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RZU9_THAOC)

HSP 1 Score: 375 bits (963), Expect = 1.930e-126
Identity = 197/322 (61.18%), Postives = 233/322 (72.36%), Query Frame = 1
Query:   85 RNPSGIKNKIKRSVEYAKHKAEKSKAKKEQRQHREEEVRELGEEALPKRAPRTLESTREAEPTAVTPEDHEVFADEAEDEFALFFSNEKRPKIMLTTRPRPSQELFLFVGDLMNMLPNAFYYPRKSYNVKQICEAASGRDFTHVVVLSEKAKACNGMLVSVLPD--------GPTAAFKVSNVITSQDISHHGKVSNHRPEIILNNFNTRLGHRVGRFLGSLFPHEPQFKGRQVVTFHNQRDFVFVRHHRYIFSEGNGGGPGGNSSGSGGRVAAKTRLQELGPRFTIKLKWLQEGTFDTQFGEYEWIHKRKQMDTTRRKFHL 1026
            RNP  I NK+KRS  Y K+   K   K+  R  RE++   LGE+A  K  PRTL++TRE+E T V  +D E+ ADEAEDEFA +FS+E RPKI+LTTRP PS ELF F+ DLM  +P  +YYPRKSY+VK+IC   S R FTHV+VLSEK+K CNGML+S L          GPTA FK+SN I S D+ ++G  +NH PE+ L+ F TRLGHR GRFLGSLFPH  QF+GRQV TFHNQRDF+FVRHHRYIF EG       ++S        K RLQELGPRFTIK++WLQEGTFDTQFGEYEW HKRK+MDTTRRKFHL
Sbjct:   31 RNPGHITNKLKRSEMYGKYLLAKKAQKRASRIAREKQAEALGEDAPAKPKPRTLDNTRESEVTTVKEDDEEIIADEAEDEFAPYFSDEIRPKILLTTRPCPSAELFHFIADLMRFIPQMYYYPRKSYSVKEICTFGSNRRFTHVIVLSEKSKVCNGMLISHLRPSTAANGLGGPTAFFKLSNYIPSTDVPNNGSATNHVPELNLHGFTTRLGHRAGRFLGSLFPHNAQFQGRQVATFHNQRDFIFVRHHRYIFEEGK------DTSKETKEKKTKARLQELGPRFTIKMRWLQEGTFDTQFGEYEWFHKRKEMDTTRRKFHL 346          
BLAST of mRNA_P-wetherbeei_contig2102.1.1 vs. uniprot
Match: A0A7S2RJX4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJX4_9STRA)

HSP 1 Score: 375 bits (962), Expect = 2.830e-126
Identity = 196/321 (61.06%), Postives = 240/321 (74.77%), Query Frame = 1
Query:   88 NPSGIKNKIKRSVEYAKHKAEKSKAKKEQRQHRE---EEVRELGEEALPKRAPRTLESTREAEPTAVTPEDHEVFADEAEDEFALFFSNEKRPKIMLTTRPRPSQELFLFVGDLMNMLPNAFYYPRKSYNVKQICEAASGRDFTHVVVLSEKAKACNGMLVSVLPDGPTAAFKVSNVITSQDISHHGKVSNHRPEIILNNFNTRLGHRVGRFLGSLFPHEPQFKGRQVVTFHNQRDFVFVRHHRYIFSEGNG-----GGPGGNSSGSGGRVAAKTRLQELGPRFTIKLKWLQEGTFDTQFGEYEWIHKRKQMDTTRRKFHL 1026
            +PS I+NK KR+  Y+K KA K K K+++R   +   E    LGEE LPK+ PRT+E+TR  +PT V  +D EVF DEA DEFA  FSN + PKIM+TTRPRPS+ELF F+ DLM ++P A+YYPRK ++VK+IC  AS ++FTH+VVL EKAK CNGMLVS LP+GPTA FKVSNV    DI HHG  ++H PEI+LNNF+TRLG RVGRFLGSLFPH+P F GRQ VTFHNQRD++FVRHHRYIF E              S+    +   K RLQELGPRFT+KL+WLQ+G+FDT +GEYEWIH+R +MDT+RRKFHL
Sbjct:   28 DPSSIRNKAKRTKVYSKLKAAKKKEKQDRRASNKRAAEHAAALGEE-LPKKKPRTIENTRIDDPTFVKADDLEVFGDEATDEFAQIFSNTETPKIMITTRPRPSKELFKFISDLMQLIPKAYYYPRKGFDVKKICSFASSKNFTHLVVLGEKAKTCNGMLVSRLPEGPTAFFKVSNVQLGCDIEHHGSKTSHCPEILLNNFHTRLGRRVGRFLGSLFPHDPDFTGRQAVTFHNQRDYIFVRHHRYIFDEVESQEEPKASKKTKSAPEKTKERVKARLQELGPRFTLKLRWLQQGSFDTLYGEYEWIHRRGEMDTSRRKFHL 347          
BLAST of mRNA_P-wetherbeei_contig2102.1.1 vs. uniprot
Match: H3G8K0_PHYRM (Brix domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=H3G8K0_PHYRM)

HSP 1 Score: 366 bits (939), Expect = 3.830e-123
Identity = 187/315 (59.37%), Postives = 237/315 (75.24%), Query Frame = 1
Query:   85 RNPSGIKNKIKRSVEYAKHKAEKSKAKKEQRQHREEEVRELGEEALPKRAPRTLESTREAEPTAVTPE-DHEVFADEAEDEFALFFSNEKRPKIMLTTRPRPSQELFLFVGDLMNMLPNAFYYPRKSYNVKQICEAASGRDFTHVVVLSEKAKACNGMLVSVLPDGPTAAFKVSNVITSQDISHHGKVSNHRPEIILNNFNTRLGHRVGRFLGSLFPHEPQFKGRQVVTFHNQRDFVFVRHHRYIFSEGNGGGPGGNSSGSGGRVAAKTRLQELGPRFTIKLKWLQEGTFDTQFGEYEWIHKRKQMDTTRRKFHL 1026
            RNPS IKNK+KR +   K + EK +AKK  +  R  E  E+GEEA  K  PRT+++TRE E T V+ E D E+ ADE +DEFA  F+NE+ PK+M+TTRP PS EL+ F+ DLM++LPN+FYY R ++++K+I + A+ + FTH+VVLSEK+K CNGMLVS LPDGPTA FKVSNV  +  I   G+ +NH+PE+ILNNF+TRLGHRVGRFLGSLF H+P+F+G QVVTFHNQRDF+FVRHHRY F                     K RLQE+GPRFT+KL+WLQ+GTFDT++GEYEWIHK+ Q+DT+RRKFHL
Sbjct:   26 RNPSHIKNKMKRQIVMQKFRKEKKEAKKAAQIKRRREAEEMGEEAPAKMEPRTIDNTREKEVTMVSSEGDEEIEADERDDEFASIFANEEAPKLMITTRPFPSGELYHFIKDLMDLLPNSFYYKRGTFDIKEIVQFATNKKFTHLVVLSEKSKICNGMLVSRLPDGPTAFFKVSNVKLTASIKERGRRTNHQPELILNNFSTRLGHRVGRFLGSLFEHQPEFEGHQVVTFHNQRDFIFVRHHRYTFEN-----------------EKKARLQEIGPRFTMKLRWLQQGTFDTKYGEYEWIHKQHQLDTSRRKFHL 323          
BLAST of mRNA_P-wetherbeei_contig2102.1.1 vs. uniprot
Match: W2P3R9_PHYPR (Brix domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=W2P3R9_PHYPR)

HSP 1 Score: 366 bits (939), Expect = 4.110e-123
Identity = 187/315 (59.37%), Postives = 237/315 (75.24%), Query Frame = 1
Query:   85 RNPSGIKNKIKRSVEYAKHKAEKSKAKKEQRQHREEEVRELGEEALPKRAPRTLESTREAEPTAVTPE-DHEVFADEAEDEFALFFSNEKRPKIMLTTRPRPSQELFLFVGDLMNMLPNAFYYPRKSYNVKQICEAASGRDFTHVVVLSEKAKACNGMLVSVLPDGPTAAFKVSNVITSQDISHHGKVSNHRPEIILNNFNTRLGHRVGRFLGSLFPHEPQFKGRQVVTFHNQRDFVFVRHHRYIFSEGNGGGPGGNSSGSGGRVAAKTRLQELGPRFTIKLKWLQEGTFDTQFGEYEWIHKRKQMDTTRRKFHL 1026
            RNPS IKNK+KR +   K + EK +AKK  +  R  E  E+GEEA  K  PRT+++TRE E T V+ E D E+ ADE +DEFA  F+NE+ PK+M+TTRP PS EL+ F+ DLM++LPN+FYY R ++++K+I + AS + FTH++VLSEK+K CNGMLVS LP+GPTA FKVSNV  +  I   G+ +NH+PE+ILNNF+TRLGHRVGRFLGSLF H+P+F+G QVVTFHNQRDF+FVRHHRY F                     K RLQE+GPRFT+KL+WLQ+GTFDT+FGEYEWIHK+ Q+DT+RRKFHL
Sbjct:   28 RNPSHIKNKMKRQLVMQKFRKEKKEAKKAAQLKRRREAEEMGEEAPAKMEPRTIDNTREKEVTMVSNEGDEEIEADERDDEFASIFANEEAPKLMITTRPFPSGELYHFIKDLMDLLPNSFYYKRGTFDIKEIVQFASNKKFTHLIVLSEKSKICNGMLVSRLPEGPTAFFKVSNVKLTSSIKERGRRTNHQPELILNNFSTRLGHRVGRFLGSLFEHQPEFEGHQVVTFHNQRDFIFVRHHRYTFEN-----------------EKKARLQEIGPRFTMKLRWLQQGTFDTKFGEYEWIHKQHQLDTSRRKFHL 325          
BLAST of mRNA_P-wetherbeei_contig2102.1.1 vs. uniprot
Match: A0A484EHM9_BRELC (Brix domain-containing protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A484EHM9_BRELC)

HSP 1 Score: 365 bits (936), Expect = 3.710e-122
Identity = 185/315 (58.73%), Postives = 238/315 (75.56%), Query Frame = 1
Query:   85 RNPSGIKNKIKRSVEYAKHKAEKSKAKKEQRQHREEEVRELGEEALPKRAPRTLESTREAEPTAVTPE-DHEVFADEAEDEFALFFSNEKRPKIMLTTRPRPSQELFLFVGDLMNMLPNAFYYPRKSYNVKQICEAASGRDFTHVVVLSEKAKACNGMLVSVLPDGPTAAFKVSNVITSQDISHHGKVSNHRPEIILNNFNTRLGHRVGRFLGSLFPHEPQFKGRQVVTFHNQRDFVFVRHHRYIFSEGNGGGPGGNSSGSGGRVAAKTRLQELGPRFTIKLKWLQEGTFDTQFGEYEWIHKRKQMDTTRRKFHL 1026
            RNPS IKNK+KR +     + EK +AKK  +  R+ +  ELGEEA+PK  PRT+++TRE E T V+ E D E+ ADE +DEFA  F+NE+ PK+M+TTRP PS +L+ F+ DLM++LPN+FYY R ++++K+I + AS + FTH++VLSEK+K CNGMLVS L DGPTA FK+SNV  +  I   G+ +NH+PE+ILNNF+TRLGHRVGRFLGSLF H+P+F+G QVVTFHNQRDF+FVRHHRY F                     K RLQE+GPRFT+KL+WLQ+GTFDT+FGEYEWIHK+ Q+DT+RRKFHL
Sbjct:   62 RNPSHIKNKMKRQLVMQTFRKEKKEAKKAAKLKRQRDAEELGEEAVPKMEPRTIDNTREEEVTMVSMEGDEEIDADERDDEFASIFNNEEVPKLMITTRPFPSGDLYHFIKDLMDLLPNSFYYKRGTFDIKEIVQFASNKKFTHLIVLSEKSKICNGMLVSRLDDGPTAFFKISNVKLTSSIKERGRRTNHQPELILNNFSTRLGHRVGRFLGSLFEHQPEFEGHQVVTFHNQRDFIFVRHHRYTFENDK-----------------KARLQEIGPRFTMKLRWLQQGTFDTKFGEYEWIHKQHQLDTSRRKFHL 359          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2102.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YUA9_9STRA2.890e-13963.05Anticodon-binding protein n=1 Tax=Tribonema minus ... [more]
D8LJM9_ECTSI2.370e-13765.70Brix domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6U3UYI3_9STRA2.660e-13462.80Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A4D9CX49_9STRA2.680e-13463.30Brix domain-containing protein n=2 Tax=Monodopsida... [more]
A0A7S2S9M3_9STRA2.040e-12959.76Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
K0RZU9_THAOC1.930e-12661.18Brix domain-containing protein n=1 Tax=Thalassiosi... [more]
A0A7S2RJX4_9STRA2.830e-12661.06Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
H3G8K0_PHYRM3.830e-12359.37Brix domain-containing protein n=4 Tax=Phytophthor... [more]
W2P3R9_PHYPR4.110e-12359.37Brix domain-containing protein n=14 Tax=Phytophtho... [more]
A0A484EHM9_BRELC3.710e-12258.73Brix domain-containing protein n=3 Tax=Peronospora... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig2102contigP-wetherbeei_contig2102:1553..4030 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LJM9
Preferred nameRPF1
PFAMsBrix
Model size1052
Max annot lvl2759|Eukaryota
KEGG koko:K14846
Hectar predicted targeting categoryother localisation
GOsGO:0000027,GO:0000054,GO:0000055,GO:0000460,GO:0000463,GO:0000466,GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005732,GO:0006139,GO:0006364,GO:0006396,GO:0006403,GO:0006405,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0008104,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0016070,GO:0016072,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0030684,GO:0030687,GO:0031503,GO:0031974,GO:0031981,GO:0032991,GO:0033036,GO:0033750,GO:0034470,GO:0034613,GO:0034622,GO:0034641,GO:0034660,GO:0042134,GO:0042254,GO:0042255,GO:0042273,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045184,GO:0046483,GO:0046907,GO:0050657,GO:0050658,GO:0051168,GO:0051169,GO:0051179,GO:0051234,GO:0051236,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0065003,GO:0070013,GO:0070727,GO:0070925,GO:0071166,GO:0071426,GO:0071428,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990904
Exons5
Evalue1.21e-138
EggNOG OGsCOG2136@1|root,KOG2780@2759|Eukaryota
Ec32 ortholog descriptionBrix domain
Ec32 orthologEc-17_002670.1
DescriptionrRNA primary transcript binding
Cds size957
COG categoryAJ
BRITEko00000,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig2102.1.1prot_P-wetherbeei_contig2102.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig2102 1625..4007 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186214.9058316-UTR-P-wetherbeei_contig2102:1552..16241683186214.9058316-UTR-P-wetherbeei_contig2102:1552..1624Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig2102 1553..1624 +
1683186214.9745922-UTR-P-wetherbeei_contig2102:4007..40301683186214.9745922-UTR-P-wetherbeei_contig2102:4007..4030Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig2102 4008..4030 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186214.9225833-CDS-P-wetherbeei_contig2102:1624..17471683186214.9225833-CDS-P-wetherbeei_contig2102:1624..1747Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2102 1625..1747 +
1683186214.9342644-CDS-P-wetherbeei_contig2102:2146..24081683186214.9342644-CDS-P-wetherbeei_contig2102:2146..2408Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2102 2147..2408 +
1683186214.9501252-CDS-P-wetherbeei_contig2102:2797..29571683186214.9501252-CDS-P-wetherbeei_contig2102:2797..2957Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2102 2798..2957 +
1683186214.957642-CDS-P-wetherbeei_contig2102:3274..34161683186214.957642-CDS-P-wetherbeei_contig2102:3274..3416Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2102 3275..3416 +
1683186214.9669597-CDS-P-wetherbeei_contig2102:3737..40071683186214.9669597-CDS-P-wetherbeei_contig2102:3737..4007Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2102 3738..4007 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig2102.1.1

>prot_P-wetherbeei_contig2102.1.1 ID=prot_P-wetherbeei_contig2102.1.1|Name=mRNA_P-wetherbeei_contig2102.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=319bp
MAVGRNPSGIKNKIKRSVEYAKHKAEKSKAKKEQRQHREEEVRELGEEAL
PKRAPRTLESTREAEPTAVTPEDHEVFADEAEDEFALFFSNEKRPKIMLT
TRPRPSQELFLFVGDLMNMLPNAFYYPRKSYNVKQICEAASGRDFTHVVV
LSEKAKACNGMLVSVLPDGPTAAFKVSNVITSQDISHHGKVSNHRPEIIL
NNFNTRLGHRVGRFLGSLFPHEPQFKGRQVVTFHNQRDFVFVRHHRYIFS
EGNGGGPGGNSSGSGGRVAAKTRLQELGPRFTIKLKWLQEGTFDTQFGEY
EWIHKRKQMDTTRRKFHL*
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mRNA from alignment at P-wetherbeei_contig2102:1553..4030+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig2102.1.1 ID=mRNA_P-wetherbeei_contig2102.1.1|Name=mRNA_P-wetherbeei_contig2102.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2478bp|location=Sequence derived from alignment at P-wetherbeei_contig2102:1553..4030+ (Phaeothamnion wetherbeei SAG_119_79)
CCATTGAGCGGCACCACTATTCTGCGTTGACATTTTTCGTTTACAGAGGG TTTCACTCCTCTACCATCAACCATGGCGGTCGGAAGGAATCCGTCCGGCA TCAAAAACAAGATCAAGCGGAGCGTCGAGTATGCGAAGCACAAGGCCGAA AAATCAAAGGCGAAGAAGGAGCAGCGACAGCATCGCGAGGAGGAGGTGCG GAATCCGAAAGGGCTTTCATGTTGTCCTTGTCCTCTTTATAGGTTTCTTC GAACGCGAAGTGATGAACAGAGAGAAAACTCTCTTGCGTTCTTGTTGTCA CTTCTCGACCTCACATTTTTTCGTTGCCCTTAGCGTGACAGGAAATCAAA ACTCTTTACGTTGGTAGGCATACGCATCCTTTTCTTGGACACCAGTTGCT TCGTTCGGCGGCTGAGTGGACGACGGTTCCGTGGGTCGGGTTCACCTAGT TTCGCTTTTCACCCAACGCGCTGAGAAGCATCTGATACCCATCGTGGTTC CTGACCCCCATCCGTCCCCGTCCTCTCTGGCTCCCGCCACGCCGAAAACA TCCCTCGAAAACCCCGTCAAAACCCGCAAAAATATCACGTTCAGGTGCGC GAACTCGGCGAGGAGGCGCTGCCGAAGCGTGCCCCGCGTACCCTCGAGAG CACCCGCGAGGCCGAGCCGACGGCGGTGACGCCGGAGGACCACGAGGTCT TCGCCGACGAGGCGGAGGACGAATTCGCGCTTTTCTTCAGCAACGAAAAG CGGCCGAAGATCATGCTAACGACGCGGCCGCGGCCGTCGCAGGAGCTGTT TCTCTTCGTGGGGGACCTCATGAACATGCTGCCCAATGCCTTCTACTACC CGAGAAGTGAGCTTTTGGCTTTGGCTCGCCGCTCCGTTCTGCTCCGGCGT TGTTAAAACAAACCACCTAGAAATGGTCCCTTGCGGCTGTCGACGCCGGG AGAGGGCTCTAGCTTTCTACTTTGGTTTCTCTGAACGCGGCTCTTGGCGG CGGTGTCCCTTCTTCTTTTCTGGCTGTTTAGCCGCCGCCGCCGCCGAGGG TGATCCAAAACACCCTCTGTTGCTGTGTCAGGTTGGTTGCAGATTAAGGC GGCTCTTTTGGAAAGTATTGCATTCTCCCTTCATCTTCCTTGTCATTTCG TCTAACCGCCAAGATCTCCACTGCATGCGTATGCTCTACGACGCCATCGA CGGCAAACTGAAACCGGCGAAATACGGCGGTTGAAACAAAAACAGAATCG TACAACGTGAAGCAGATCTGCGAGGCGGCCAGCGGGCGCGATTTCACGCA TGTGGTGGTGCTGTCTGAAAAGGCCAAGGCGTGCAACGGCATGCTCGTGT CGGTGCTGCCAGATGGCCCCACCGCCGCTTTCAAGGTCAGCAACGTCATC ACCAGGTAGGTGCGCTTCCGGCGTCTGCCTCATTTGCGTCGAGTCGTTTC GCTGCCGCGAAGGGCGGTTGCTGCCGCGAGGACGCTCCGCTTTCTTGCTG GATTAGTGGGGCTGGTGGAAGCGGAGCTGTGTCAACCCTCACGTCTTCCG TGTTGTAGTGCCACTGCGTGTTCTATGCTGTGCTTGCACTAGCTTTCCAC ACGTAAAAAAGATGCTGCATCCCGCAATCTGTCGACTCTCATCAGCCAGC GTGCGCAACCAGTCCCTCCACTTTTCTTTTGTTTCTTTCGTCCGTCTATC TTCCTCCCTCTACTCCCGGCAGCCAAGACATCAGCCACCACGGCAAGGTG TCGAACCACCGGCCGGAGATCATCCTCAATAACTTCAACACACGGCTCGG CCACCGCGTCGGCCGCTTTCTTGGATCCCTCTTCCCGCACGAGCCCCAGT TTAAGGGCCGCCAGGTCGGTTCCGCTTGATTTGGGTCGCTCTGCTTTGCT TCGGTCTTGTCAATCTTTGTATTCTTTGCGCGGTCTCTCGCTGCCTTAAT GATCAGCGGCGCTTGTAGCTTTGGCCGATTCTAACTGTTCTGGCATGTAA TGGATGACTTTTCTGATTGCAGCTGGCAGATTGCGTTTGCTTCAGCAAAC GTTCTATTCACCAACGGTTTCCTCTTGCCGGTTGCAAAAGCCAGACTCTA GAGCAGCACTTGGTTAAGGCTCCTGTACCATGTCATTGACCAACATACTC TCGTTTGTTCCCATTGCCGCTGCGGCTGATGGCAGGTGGTGACGTTCCAC AACCAGCGAGACTTCGTCTTTGTGCGGCACCACCGCTATATCTTCTCGGA GGGGAACGGCGGCGGCCCTGGCGGCAACAGCTCTGGCTCGGGCGGCAGGG TGGCGGCGAAGACACGGCTGCAGGAGCTGGGGCCGCGGTTCACCATCAAG CTCAAGTGGCTGCAGGAGGGGACGTTCGACACGCAGTTCGGCGAGTACGA GTGGATACACAAGCGCAAGCAGATGGACACCACCCGCAGAAAGTTCCACC TGTAAATAATAAAGAAGTGAAGAGAGGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig2102:1553..4030+

>mRNA_P-wetherbeei_contig2102.1.1 ID=mRNA_P-wetherbeei_contig2102.1.1|Name=mRNA_P-wetherbeei_contig2102.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=957bp|location=Sequence derived from alignment at P-wetherbeei_contig2102:1553..4030+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGGTCGGAAGGAATCCGTCCGGCATCAAAAACAAGATCAAGCGGAG
CGTCGAGTATGCGAAGCACAAGGCCGAAAAATCAAAGGCGAAGAAGGAGC
AGCGACAGCATCGCGAGGAGGAGGTGCGCGAACTCGGCGAGGAGGCGCTG
CCGAAGCGTGCCCCGCGTACCCTCGAGAGCACCCGCGAGGCCGAGCCGAC
GGCGGTGACGCCGGAGGACCACGAGGTCTTCGCCGACGAGGCGGAGGACG
AATTCGCGCTTTTCTTCAGCAACGAAAAGCGGCCGAAGATCATGCTAACG
ACGCGGCCGCGGCCGTCGCAGGAGCTGTTTCTCTTCGTGGGGGACCTCAT
GAACATGCTGCCCAATGCCTTCTACTACCCGAGAAAATCGTACAACGTGA
AGCAGATCTGCGAGGCGGCCAGCGGGCGCGATTTCACGCATGTGGTGGTG
CTGTCTGAAAAGGCCAAGGCGTGCAACGGCATGCTCGTGTCGGTGCTGCC
AGATGGCCCCACCGCCGCTTTCAAGGTCAGCAACGTCATCACCAGCCAAG
ACATCAGCCACCACGGCAAGGTGTCGAACCACCGGCCGGAGATCATCCTC
AATAACTTCAACACACGGCTCGGCCACCGCGTCGGCCGCTTTCTTGGATC
CCTCTTCCCGCACGAGCCCCAGTTTAAGGGCCGCCAGGTGGTGACGTTCC
ACAACCAGCGAGACTTCGTCTTTGTGCGGCACCACCGCTATATCTTCTCG
GAGGGGAACGGCGGCGGCCCTGGCGGCAACAGCTCTGGCTCGGGCGGCAG
GGTGGCGGCGAAGACACGGCTGCAGGAGCTGGGGCCGCGGTTCACCATCA
AGCTCAAGTGGCTGCAGGAGGGGACGTTCGACACGCAGTTCGGCGAGTAC
GAGTGGATACACAAGCGCAAGCAGATGGACACCACCCGCAGAAAGTTCCA
CCTGTAA
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