mRNA_P-wetherbeei_contig21006.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig21006.1.1
Unique NamemRNA_P-wetherbeei_contig21006.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig21006.1.1 vs. uniprot
Match: A0A8J7N345_9PROT (YeeE/YedE family protein n=1 Tax=Candidatus Odyssella sp. TaxID=2589116 RepID=A0A8J7N345_9PROT)

HSP 1 Score: 171 bits (434), Expect = 5.710e-52
Identity = 90/117 (76.92%), Postives = 107/117 (91.45%), Query Frame = 1
Query:   10 TLSVIL-GLAMGAVFGVALEKSRVFEPGVIISQMQLRTFLMLKIFLTAVATGLVILAALNGLFGIKMYPKALVWPADIIGGLLLGAGISIAGACPGTVLAQIGAGYRDAWFTVVGGI 357
            TLS IL GLAMGAVFG ALEKSRVFEPGVI+ QMQLR+F+MLK+FLTAVATGLV+LAAL+G    K++PKA ++ ADI+GGL+LGAGI++AGACPGTVLAQIGAGYRDAWFT++GG+
Sbjct:    3 TLSAILVGLAMGAVFGFALEKSRVFEPGVIVGQMQLRSFIMLKVFLTAVATGLVVLAALHGFGFAKLFPKATIFGADIVGGLVLGAGITLAGACPGTVLAQIGAGYRDAWFTLIGGL 119          
BLAST of mRNA_P-wetherbeei_contig21006.1.1 vs. uniprot
Match: UPI001CFE84F8 (YeeE/YedE family protein n=1 Tax=Roseicella sp. GB24 TaxID=2883479 RepID=UPI001CFE84F8)

HSP 1 Score: 167 bits (422), Expect = 3.890e-50
Identity = 86/119 (72.27%), Postives = 104/119 (87.39%), Query Frame = 1
Query:    1 MNVTLSVILGLAMGAVFGVALEKSRVFEPGVIISQMQLRTFLMLKIFLTAVATGLVILAALNGLFGIKMYPKALVWPADIIGGLLLGAGISIAGACPGTVLAQIGAGYRDAWFTVVGGI 357
            M+V  ++ +GLAMGAVFG+ALEKSRVFEPGVI+ QMQLR FLMLKIFLTAV TGL++LA LNGL   K++PKA ++ AD++GGLLLG GI++AGACPGTV AQIGAGYRDAWFT+ GG+
Sbjct:    1 MSVLAAIAIGLAMGAVFGLALEKSRVFEPGVILGQMQLRNFLMLKIFLTAVTTGLLVLAVLNGLGLAKLHPKATLYGADLLGGLLLGIGIALAGACPGTVAAQIGAGYRDAWFTLAGGL 119          
BLAST of mRNA_P-wetherbeei_contig21006.1.1 vs. uniprot
Match: UPI001FED7791 (YeeE/YedE family protein n=1 Tax=Pseudolabrys sp. FHR47 TaxID=2562284 RepID=UPI001FED7791)

HSP 1 Score: 161 bits (407), Expect = 6.900e-48
Identity = 82/119 (68.91%), Postives = 102/119 (85.71%), Query Frame = 1
Query:    1 MNVTLSVILGLAMGAVFGVALEKSRVFEPGVIISQMQLRTFLMLKIFLTAVATGLVILAALNGLFGIKMYPKALVWPADIIGGLLLGAGISIAGACPGTVLAQIGAGYRDAWFTVVGGI 357
            M++T +++ G+ MG VFG ALEKSRVFEPGVI+ QMQ+R F+MLK+FLTAVATG V+LA LNG   +K+ PKA ++ ADIIGGL+LGAGI++AGACPGT LAQIGAGYRDA FT+VGG+
Sbjct:    1 MSLTFAIVTGIVMGIVFGFALEKSRVFEPGVIVGQMQMRNFIMLKVFLTAVATGAVVLAVLNGFGYVKLAPKAAMYYADIIGGLILGAGIALAGACPGTTLAQIGAGYRDALFTLVGGL 119          
BLAST of mRNA_P-wetherbeei_contig21006.1.1 vs. uniprot
Match: A0A371BCU0_9HYPH (Sulf_transp domain-containing protein n=2 Tax=Pseudolabrys sp. GY_H TaxID=2292256 RepID=A0A371BCU0_9HYPH)

HSP 1 Score: 160 bits (405), Expect = 1.430e-47
Identity = 80/119 (67.23%), Postives = 102/119 (85.71%), Query Frame = 1
Query:    1 MNVTLSVILGLAMGAVFGVALEKSRVFEPGVIISQMQLRTFLMLKIFLTAVATGLVILAALNGLFGIKMYPKALVWPADIIGGLLLGAGISIAGACPGTVLAQIGAGYRDAWFTVVGGI 357
            M +T ++++G+ MG VFG ALEKSRVFEPG+I+ QMQ+R F+MLK+FLTAVATG V+LA LNG   +K+ PKA ++ ADIIGGL+LGAGI++AGACPGT LAQ+GAGYRDA FT+VGG+
Sbjct:    2 MTLTSAIVIGIVMGIVFGFALEKSRVFEPGIIVGQMQMRNFIMLKVFLTAVATGAVVLAVLNGFGYVKLAPKAAMYYADIIGGLILGAGIALAGACPGTTLAQVGAGYRDALFTLVGGL 120          
BLAST of mRNA_P-wetherbeei_contig21006.1.1 vs. uniprot
Match: A0A212KH35_9PROT (Putative Membrane protein n=1 Tax=uncultured Alphaproteobacteria bacterium TaxID=91750 RepID=A0A212KH35_9PROT)

HSP 1 Score: 159 bits (402), Expect = 2.450e-47
Identity = 81/119 (68.07%), Postives = 99/119 (83.19%), Query Frame = 1
Query:    1 MNVTLSVILGLAMGAVFGVALEKSRVFEPGVIISQMQLRTFLMLKIFLTAVATGLVILAALNGLFGIKMYPKALVWPADIIGGLLLGAGISIAGACPGTVLAQIGAGYRDAWFTVVGGI 357
            M VT  ++LGLAMGA FG ALEK RVFEPGVI+ QMQ R+F MLK+F+ AV TGLV+LAALNG++G+K++PKA  + A++ GG LLG GI +AGACPGTV AQIGAGYRDAWFT+ GG+
Sbjct:    1 MGVTAMMMLGLAMGAAFGFALEKGRVFEPGVIVGQMQFRSFTMLKMFVAAVITGLVVLAALNGIWGVKLHPKAAEFGANVAGGSLLGIGIVLAGACPGTVFAQIGAGYRDAWFTLAGGL 119          
BLAST of mRNA_P-wetherbeei_contig21006.1.1 vs. uniprot
Match: A0A2S6MXS1_RHOGL (Sulf_transp domain-containing protein n=1 Tax=Rhodopila globiformis TaxID=1071 RepID=A0A2S6MXS1_RHOGL)

HSP 1 Score: 159 bits (403), Expect = 2.960e-47
Identity = 83/119 (69.75%), Postives = 103/119 (86.55%), Query Frame = 1
Query:    1 MNVTLSVILGLAMGAVFGVALEKSRVFEPGVIISQMQLRTFLMLKIFLTAVATGLVILAALNGLFGIKMYPKALVWPADIIGGLLLGAGISIAGACPGTVLAQIGAGYRDAWFTVVGGI 357
            M+V L+++LGLAMGAVFGVALEKSRVFEPGVI+ QMQLR FLMLK+FLTAVAT LV +AAL+G   + ++PK  ++ AD+ GG LLG G+++AGACPGTV AQIGAGYRDAWFT++GG+
Sbjct:    1 MSVFLAILLGLAMGAVFGVALEKSRVFEPGVIVGQMQLRNFLMLKMFLTAVATSLVAVAALHGFGLVALHPKPTMYLADVSGGGLLGVGVTLAGACPGTVAAQIGAGYRDAWFTLLGGL 119          
BLAST of mRNA_P-wetherbeei_contig21006.1.1 vs. uniprot
Match: A0A364NT29_9PROT (Sulf_transp domain-containing protein n=2 Tax=Magnetospirillum kuznetsovii TaxID=2053833 RepID=A0A364NT29_9PROT)

HSP 1 Score: 159 bits (403), Expect = 3.050e-47
Identity = 79/119 (66.39%), Postives = 104/119 (87.39%), Query Frame = 1
Query:    1 MNVTLSVILGLAMGAVFGVALEKSRVFEPGVIISQMQLRTFLMLKIFLTAVATGLVILAALNGLFGIKMYPKALVWPADIIGGLLLGAGISIAGACPGTVLAQIGAGYRDAWFTVVGGI 357
            M+V  ++++GLAMG VFG ALEKSRVFEPG+I+ QMQ+R F+MLKIFLTAVATGL++L  ++ L+G+KM+PK  +  AD++GG+LLG GI++AGACPGTVLAQIGAGY+DAW T+VGG+
Sbjct:    2 MSVVTAILIGLAMGFVFGFALEKSRVFEPGIIVGQMQMRNFIMLKIFLTAVATGLLVLTVMS-LYGVKMHPKPTLAMADLVGGMLLGVGITVAGACPGTVLAQIGAGYKDAWITLVGGL 119          
BLAST of mRNA_P-wetherbeei_contig21006.1.1 vs. uniprot
Match: UPI001EDFB302 (YeeE/YedE family protein n=1 Tax=unclassified Xanthobacter TaxID=2623496 RepID=UPI001EDFB302)

HSP 1 Score: 159 bits (402), Expect = 3.950e-47
Identity = 81/119 (68.07%), Postives = 101/119 (84.87%), Query Frame = 1
Query:    1 MNVTLSVILGLAMGAVFGVALEKSRVFEPGVIISQMQLRTFLMLKIFLTAVATGLVILAALNGLFGIKMYPKALVWPADIIGGLLLGAGISIAGACPGTVLAQIGAGYRDAWFTVVGGI 357
            M+V  ++++GLAMG VFG A EK+RVFEPG+I+ QMQLR F MLK+FLTAVATG V+LAAL G   IK+ PKA  + AD++GGL+LGAGI++AGACPGT+LAQIGAGYRDAWFT+ GG+
Sbjct:    1 MSVFPAILIGLAMGVVFGFAFEKARVFEPGMIVGQMQLRNFTMLKVFLTAVATGAVVLAALQGFGLIKLAPKATFYAADMLGGLVLGAGITLAGACPGTILAQIGAGYRDAWFTLAGGL 119          
BLAST of mRNA_P-wetherbeei_contig21006.1.1 vs. uniprot
Match: A0A259KTE7_9HYPH (Sulf_transp domain-containing protein n=4 Tax=unclassified Hyphomicrobiales TaxID=41292 RepID=A0A259KTE7_9HYPH)

HSP 1 Score: 159 bits (401), Expect = 5.940e-47
Identity = 81/119 (68.07%), Postives = 104/119 (87.39%), Query Frame = 1
Query:    1 MNVTLSVILGLAMGAVFGVALEKSRVFEPGVIISQMQLRTFLMLKIFLTAVATGLVILAALNGLFGIKMYPKALVWPADIIGGLLLGAGISIAGACPGTVLAQIGAGYRDAWFTVVGGI 357
            M++  ++++GLAMG VFGVALEKSRVFEPG+I+ QMQLR F+MLK+FLTAVATG V+LAAL+G   IK+ PKA  + AD++GG++LGAGI++AGACPGTVLAQ+G GYRDA FT+VGG+
Sbjct:    1 MSLLQAILIGLAMGIVFGVALEKSRVFEPGMIVGQMQLRNFIMLKVFLTAVATGAVVLAALHGFGLIKLAPKATFFAADVLGGIVLGAGIALAGACPGTVLAQVGVGYRDAIFTLVGGL 119          
BLAST of mRNA_P-wetherbeei_contig21006.1.1 vs. uniprot
Match: A0A127EZS8_9HYPH (YeeE/YedE family protein n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EZS8_9HYPH)

HSP 1 Score: 158 bits (400), Expect = 7.710e-47
Identity = 80/114 (70.18%), Postives = 98/114 (85.96%), Query Frame = 1
Query:   16 SVILGLAMGAVFGVALEKSRVFEPGVIISQMQLRTFLMLKIFLTAVATGLVILAALNGLFGIKMYPKALVWPADIIGGLLLGAGISIAGACPGTVLAQIGAGYRDAWFTVVGGI 357
            ++I GL MG VFG ALEKSRVFEPG+I+ QMQLR F+MLK+FLTA+ATG ++LAALNGL  +K+ PKA ++ AD IGGL+LGAGI++AGACPGT LAQIGAGYRDA FT+ GG+
Sbjct:    7 AIIAGLVMGVVFGFALEKSRVFEPGIIVGQMQLRNFIMLKVFLTAIATGALVLAALNGLGFVKLQPKAALYAADAIGGLILGAGIALAGACPGTTLAQIGAGYRDALFTLAGGL 120          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21006.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J7N345_9PROT5.710e-5276.92YeeE/YedE family protein n=1 Tax=Candidatus Odysse... [more]
UPI001CFE84F83.890e-5072.27YeeE/YedE family protein n=1 Tax=Roseicella sp. GB... [more]
UPI001FED77916.900e-4868.91YeeE/YedE family protein n=1 Tax=Pseudolabrys sp. ... [more]
A0A371BCU0_9HYPH1.430e-4767.23Sulf_transp domain-containing protein n=2 Tax=Pseu... [more]
A0A212KH35_9PROT2.450e-4768.07Putative Membrane protein n=1 Tax=uncultured Alpha... [more]
A0A2S6MXS1_RHOGL2.960e-4769.75Sulf_transp domain-containing protein n=1 Tax=Rhod... [more]
A0A364NT29_9PROT3.050e-4766.39Sulf_transp domain-containing protein n=2 Tax=Magn... [more]
UPI001EDFB3023.950e-4768.07YeeE/YedE family protein n=1 Tax=unclassified Xant... [more]
A0A259KTE7_9HYPH5.940e-4768.07Sulf_transp domain-containing protein n=4 Tax=uncl... [more]
A0A127EZS8_9HYPH7.710e-4770.18YeeE/YedE family protein n=1 Tax=Rhodoplanes sp. Z... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig21006contigP-wetherbeei_contig21006:4..360 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1131814.JAFO01000001_gene4469
PFAMsSulf_transp
Model size357
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K07112
Hectar predicted targeting categorysignal peptide
Exons1
Evalue9.46e-48
EggNOG OGsCOG2391@1|root,COG2391@2|Bacteria,1RIWE@1224|Proteobacteria,2U4F1@28211|Alphaproteobacteria
DescriptionSulphur transport
Cds size357
COG categoryS
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186214.5675795-CDS-P-wetherbeei_contig21006:3..3601683186214.5675795-CDS-P-wetherbeei_contig21006:3..360Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig21006 4..360 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig21006.1.1prot_P-wetherbeei_contig21006.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig21006 4..360 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig21006.1.1

>prot_P-wetherbeei_contig21006.1.1 ID=prot_P-wetherbeei_contig21006.1.1|Name=mRNA_P-wetherbeei_contig21006.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=119bp
MNVTLSVILGLAMGAVFGVALEKSRVFEPGVIISQMQLRTFLMLKIFLTA
VATGLVILAALNGLFGIKMYPKALVWPADIIGGLLLGAGISIAGACPGTV
LAQIGAGYRDAWFTVVGGI
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mRNA from alignment at P-wetherbeei_contig21006:4..360-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig21006.1.1 ID=mRNA_P-wetherbeei_contig21006.1.1|Name=mRNA_P-wetherbeei_contig21006.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=357bp|location=Sequence derived from alignment at P-wetherbeei_contig21006:4..360- (Phaeothamnion wetherbeei SAG_119_79)
ATGAACGTCACTCTGTCAGTCATTCTCGGCCTCGCCATGGGCGCGGTGTT CGGAGTCGCGCTTGAGAAATCGCGCGTCTTCGAGCCGGGCGTCATCATCA GCCAAATGCAACTGCGCACGTTCTTGATGCTCAAGATCTTTCTGACTGCA GTCGCGACGGGGCTCGTGATCCTTGCAGCATTGAACGGTCTATTCGGCAT CAAGATGTACCCCAAGGCACTGGTCTGGCCGGCCGACATCATCGGCGGTT TGCTGCTCGGCGCCGGCATTTCTATTGCCGGGGCATGCCCTGGGACGGTG CTCGCGCAGATTGGCGCTGGCTATCGCGACGCTTGGTTCACTGTTGTCGG TGGCATA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig21006:4..360-

>mRNA_P-wetherbeei_contig21006.1.1 ID=mRNA_P-wetherbeei_contig21006.1.1|Name=mRNA_P-wetherbeei_contig21006.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=357bp|location=Sequence derived from alignment at P-wetherbeei_contig21006:4..360- (Phaeothamnion wetherbeei SAG_119_79)
ATGAACGTCACTCTGTCAGTCATTCTCGGCCTCGCCATGGGCGCGGTGTT
CGGAGTCGCGCTTGAGAAATCGCGCGTCTTCGAGCCGGGCGTCATCATCA
GCCAAATGCAACTGCGCACGTTCTTGATGCTCAAGATCTTTCTGACTGCA
GTCGCGACGGGGCTCGTGATCCTTGCAGCATTGAACGGTCTATTCGGCAT
CAAGATGTACCCCAAGGCACTGGTCTGGCCGGCCGACATCATCGGCGGTT
TGCTGCTCGGCGCCGGCATTTCTATTGCCGGGGCATGCCCTGGGACGGTG
CTCGCGCAGATTGGCGCTGGCTATCGCGACGCTTGGTTCACTGTTGTCGG
TGGCATA
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