mRNA_P-wetherbeei_contig21000.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig21000.1.1 vs. uniprot
Match: A0A355TU30_9BACT (Flagellar biosynthesis protein FlhA n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TU30_9BACT) HSP 1 Score: 237 bits (604), Expect = 8.850e-71 Identity = 134/207 (64.73%), Postives = 167/207 (80.68%), Query Frame = 1
Query: 1 VVGIVLMLIVPLPTYILDGLLVLNLLLSVATILVCMQITEPLEFSIFPTLLLVATLFRLGLDVSATRMILLFGYVKDPVTKEATGAGHLIPAFGQVVVGGNLVVGVIMFLILIIIQLIVITKGAERIAGVAARFTLDAMPLKLMAIEGELASGAVSQDKALAKREKVQQESDFFASMDGAGKFVQGDAIAAIVIMAINILGGVVIGV 621
+VGIV MLIVPLP +LD LL NL ++ T+L+ + I EPL+F++FPT+LLVATLFRL LDVSATRMILL G D VTK TGAGHLIP FG+V VGGNL+VG I+F+ILIIIQ++VIT GAERIA VAARF LDAMP K MAI+ +L +G + D A KR+ +++ESDF+ SMDGAGKFV+GDA+A+IVIM +N++GG+ IGV
Sbjct: 12 IVGIVGMLIVPLPPDLLDVLLAFNLACAIITVLISIYIEEPLQFAVFPTVLLVATLFRLALDVSATRMILLHGNEIDMVTKMPTGAGHLIPTFGKVAVGGNLIVGFILFIILIIIQIMVITNGAERIAQVAARFNLDAMPGKQMAIDADLHAGNIDADTARKKRKDIERESDFYGSMDGAGKFVKGDAMASIVIMLVNVVGGIGIGV 218
BLAST of mRNA_P-wetherbeei_contig21000.1.1 vs. uniprot
Match: A0A7X9AFN9_9BURK (Flagellar biosynthesis protein FlhA n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X9AFN9_9BURK) HSP 1 Score: 229 bits (585), Expect = 7.350e-68 Identity = 128/212 (60.38%), Postives = 167/212 (78.77%), Query Frame = 1
Query: 1 VVGIVLMLIVPLPTYILDGLLVLNLLLSVATILVCMQITEPLEFSIFPTLLLVATLFRLGLDVSATRMILLFGYVKDPVTKE-----ATGAGHLIPAFGQVVVGGNLVVGVIMFLILIIIQLIVITKGAERIAGVAARFTLDAMPLKLMAIEGELASGAVSQDKALAKREKVQQESDFFASMDGAGKFVQGDAIAAIVIMAINILGGVVIGV 621
V+GIV MLI+PLP +LD L NL +V T+L+ + I EPL+F++FPT LLVATLFRL LDVSATRM+LL+G ++ P + GAGHLIP FG+V VGGNL+VG IMF+ILIIIQ++VIT GAERIA VAARFTLDAMP K MAI+ +L SG + + A KR+ +++E+DF+ +MDGAGKFV+GDA+AA+VIM +N++GG++IGV
Sbjct: 28 VIGIVSMLIIPLPPMLLDIFLAFNLATAVITVLISIYIEEPLQFAVFPTALLVATLFRLALDVSATRMVLLYGNLRSPPSPAWPDGMPIGAGHLIPIFGKVAVGGNLIVGFIMFIILIIIQIMVITNGAERIAQVAARFTLDAMPGKQMAIDADLHSGIIDAETAKKKRKDIEREADFYGAMDGAGKFVKGDAMAAVVIMIVNVVGGILIGV 239
BLAST of mRNA_P-wetherbeei_contig21000.1.1 vs. uniprot
Match: A0A7C2ZWD8_9BACT (EscV/YscV/HrcV family type III secretion system export apparatus protein (Fragment) n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A7C2ZWD8_9BACT) HSP 1 Score: 208 bits (530), Expect = 2.560e-64 Identity = 110/207 (53.14%), Postives = 166/207 (80.19%), Query Frame = 1
Query: 1 VVGIVLMLIVPLPTYILDGLLVLNLLLSVATILVCMQITEPLEFSIFPTLLLVATLFRLGLDVSATRMILLFGYVKDPVTKEATGAGHLIPAFGQVVVGGNLVVGVIMFLILIIIQLIVITKGAERIAGVAARFTLDAMPLKLMAIEGELASGAVSQDKALAKREKVQQESDFFASMDGAGKFVQGDAIAAIVIMAINILGGVVIGV 621
V+GI+ +++VP+P +LD LL +N+ S+ T+L+ + +T+PL+FS+FP++LL+ATLFRL L+V++TR ILL+G + AGH+I +FG+ VVGGN V+G ++FLIL+IIQ +VITKGA R+A VAARFTLDAMP+K M+I+ +L++G +++++A A+RE V +E+DF+ +MDGA KFV+GDAIA ++I INI+GG++IGV
Sbjct: 29 VIGILFVMLVPMPALLLDMLLAMNITFSLVTLLIVLYVTKPLDFSVFPSMLLIATLFRLSLNVASTRRILLYG------DQSEFAAGHVINSFGKFVVGGNYVIGFVVFLILVIIQFVVITKGAGRVAEVAARFTLDAMPMKQMSIDTDLSAGLITEEEARARRETVAREADFYGAMDGASKFVRGDAIAGLIITGINIIGGLLIGV 229
BLAST of mRNA_P-wetherbeei_contig21000.1.1 vs. uniprot
Match: A0A7C2LEP6_9BACT (Flagellar biosynthesis protein FlhA n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C2LEP6_9BACT) HSP 1 Score: 218 bits (556), Expect = 1.110e-63 Identity = 110/202 (54.46%), Postives = 166/202 (82.18%), Query Frame = 1
Query: 13 VLMLIVPLPTYILDGLLVLNLLLSVATILVCMQITEPLEFSIFPTLLLVATLFRLGLDVSATRMILLFGYVKDPVTKEATGAGHLIPAFGQVVVGGNLVVGVIMFLILIIIQLIVITKGAERIAGVAARFTLDAMPLKLMAIEGELASGAVSQDKALAKREKVQQESDFFASMDGAGKFVQGDAIAAIVIMAINILGGVVIG 618
VL++IV LP ++LD LL+ +L++++ IL+ + + PL+F++FPT++LV T+FRLGL+++ATR+IL G++KDPV+ E GAGH+IP F + V GGNLV+G ++FL+++++Q IVIT+GAERIA VAARFTLDAMP K MAI+GEL SG ++ D+A +R +++E+DF+ +MDG GKFV+GD IA I+I+AI+I+GG+++G
Sbjct: 29 VLLIIVELPEWLLDMLLITDLIVAILIILMSVYVKSPLDFAVFPTIVLVETIFRLGLNIAATRLILARGHIKDPVSGEPIGAGHVIPTFAKFVAGGNLVIGFVLFLMIVVVQFIVITQGAERIAQVAARFTLDAMPGKQMAIDGELHSGLITPDEAKKRRRDIERETDFYGAMDGVGKFVKGDTIANIIILAISIIGGILMG 230
BLAST of mRNA_P-wetherbeei_contig21000.1.1 vs. uniprot
Match: UPI001CA5B70F (FHIPEP family type III secretion protein n=1 Tax=Clostridioides difficile TaxID=1496 RepID=UPI001CA5B70F) HSP 1 Score: 201 bits (512), Expect = 9.640e-62 Identity = 116/206 (56.31%), Postives = 156/206 (75.73%), Query Frame = 1
Query: 1 VVGIVLMLIVPLPTYILDGLLVLNLLLSVATILVCMQITEPLEFSIFPTLLLVATLFRLGLDVSATRMILLFGYVKDPVTKEATGAGHLIPAFGQVVVGGNLVVGVIMFLILIIIQLIVITKGAERIAGVAARFTLDAMPLKLMAIEGELASGAVSQDKALAKREKVQQESDFFASMDGAGKFVQGDAIAAIVIMAINILGGVVIG 618
VVGIVLM+IVPLPT+ILD LL +N+ LSV +L+ + T L+ SIFPT+LLV TLFRLGL++S+TR+IL GY AG +I AFG VVGGN VVG+I+FLI++I+Q +VIT G+ R++ V ARFTLDAMP K M+I+ +L +G + A +R+++QQE+DF+ SMDGA KFV+GDAIA +++ AINI+GG+VIG
Sbjct: 18 VVGIVLMMIVPLPTFILDILLAINISLSVLILLMTLFTTNVLDLSIFPTVLLVTTLFRLGLNLSSTRLILTQGY-----------AGEVIEAFGSFVVGGNYVVGIIIFLIILIVQFVVITNGSGRVSEVTARFTLDAMPGKQMSIDADLNAGVIDDKTARKRRKELQQEADFYGSMDGANKFVKGDAIAGLIVTAINIIGGIVIG 212
BLAST of mRNA_P-wetherbeei_contig21000.1.1 vs. uniprot
Match: A0A1G6S558_9FIRM (FHIPEP family protein n=1 Tax=Halanaerobium congolense TaxID=54121 RepID=A0A1G6S558_9FIRM) HSP 1 Score: 202 bits (514), Expect = 1.020e-61 Identity = 117/207 (56.52%), Postives = 156/207 (75.36%), Query Frame = 1
Query: 1 VVGIVLMLIVPLPTYILDGLLVLNLLLSVATILVCMQITEPLEFSIFPTLLLVATLFRLGLDVSATRMILLFGYVKDPVTKEATGAGHLIPAFGQVVVGGNLVVGVIMFLILIIIQLIVITKGAERIAGVAARFTLDAMPLKLMAIEGELASGAVSQDKALAKREKVQQESDFFASMDGAGKFVQGDAIAAIVIMAINILGGVVIGV 621
VV I++M I+PLPT +LD LL N+ ++ ILV + TEPL+ S+FP+LLL ATLFRLGL++S TR+IL GY AG +I +FG VVGGN VVG+I+FLI+++IQ +VITKGAER+A VAARFTLDAMP K M+I+ +L +G + +A +REK++QE+DF+ +MDGA KFV+GDAIA I+I INI+GG+VIGV
Sbjct: 22 VVSIIVMFIIPLPTMLLDMLLAANITFAMVIILVSIYTTEPLDLSVFPSLLLFATLFRLGLNISTTRLILGQGY-----------AGEIIMSFGDFVVGGNYVVGLIIFLIIVVIQFVVITKGAERVAEVAARFTLDAMPGKQMSIDADLNAGVIDNVEAKREREKIRQEADFYGAMDGASKFVKGDAIAGIIITFINIVGGLVIGV 217
BLAST of mRNA_P-wetherbeei_contig21000.1.1 vs. uniprot
Match: A0A7C5ZP35_9BACT (Flagellar biosynthesis protein FlhA n=2 Tax=Bacteria TaxID=2 RepID=A0A7C5ZP35_9BACT) HSP 1 Score: 213 bits (542), Expect = 1.260e-61 Identity = 107/202 (52.97%), Postives = 164/202 (81.19%), Query Frame = 1
Query: 13 VLMLIVPLPTYILDGLLVLNLLLSVATILVCMQITEPLEFSIFPTLLLVATLFRLGLDVSATRMILLFGYVKDPVTKEATGAGHLIPAFGQVVVGGNLVVGVIMFLILIIIQLIVITKGAERIAGVAARFTLDAMPLKLMAIEGELASGAVSQDKALAKREKVQQESDFFASMDGAGKFVQGDAIAAIVIMAINILGGVVIG 618
VL++IV LP ++LD LL+ + +S+ IL+ + + PL+F++FPTL+LV T+FRLG++++ATR+IL G++KDP + E GAGH+IP F + V GGNLV+G ++FL+++++Q IVIT+GAERIA VAARFTLDAMP K MAI+GEL +G ++ ++A +R ++++E+DF+ +MDG GKFV+GD IA I+I+AI+I+GG+++G
Sbjct: 29 VLLIIVELPPFLLDTLLITDXXVSILIILMAVYVKSPLDFAVFPTLVLVETIFRLGINIAATRLILARGHIKDPRSGEPIGAGHVIPTFAKFVAGGNLVIGFVLFLMIVVVQFIVITQGAERIAQVAARFTLDAMPGKQMAIDGELHAGLITPEEARRRRREIERETDFYGAMDGVGKFVKGDTIANIIILAISIIGGILMG 230
BLAST of mRNA_P-wetherbeei_contig21000.1.1 vs. uniprot
Match: A0A810Q949_9FIRM (Flagellar biosynthesis protein FlhA n=1 Tax=Pusillibacter faecalis TaxID=2714358 RepID=A0A810Q949_9FIRM) HSP 1 Score: 212 bits (540), Expect = 1.890e-61 Identity = 118/206 (57.28%), Postives = 164/206 (79.61%), Query Frame = 1
Query: 1 VVGIVLMLIVPLPTYILDGLLVLNLLLSVATILVCMQITEPLEFSIFPTLLLVATLFRLGLDVSATRMILLFGYVKDPVTKEATGAGHLIPAFGQVVVGGNLVVGVIMFLILIIIQLIVITKGAERIAGVAARFTLDAMPLKLMAIEGELASGAVSQDKALAKREKVQQESDFFASMDGAGKFVQGDAIAAIVIMAINILGGVVIG 618
VV IVL LI+PLPT++LD LL++N+ L++ +++ M I+E LEFSIFP+LLLV TLFRLGL+VS+TRMIL GY AG +I FGQ++ GGN+V+GV++FLI++++Q IVITKGAER+A VAARFTLDAMP K MAI+ +L+SG +++ +A A+R+K+Q+E+DF+ +MDGA K V+GDA+ +IVI IN +GGV+IG
Sbjct: 17 VVVIVLFLIIPLPTFLLDFLLIVNIGLAIMILMITMNISEALEFSIFPSLLLVTTLFRLGLNVSSTRMILRDGY-----------AGEVIQNFGQLITGGNIVIGVVIFLIIVLVQFIVITKGAERVAEVAARFTLDAMPGKQMAIDADLSSGLINEQEARARRQKIQKEADFYGAMDGATKIVKGDAVMSIVITLINFVGGVIIG 211
BLAST of mRNA_P-wetherbeei_contig21000.1.1 vs. uniprot
Match: UPI0018C58C82 (flagellar biosynthesis protein FlhA n=3 Tax=Pectinatus frisingensis TaxID=865 RepID=UPI0018C58C82) HSP 1 Score: 211 bits (537), Expect = 4.300e-61 Identity = 122/206 (59.22%), Postives = 160/206 (77.67%), Query Frame = 1
Query: 1 VVGIVLMLIVPLPTYILDGLLVLNLLLSVATILVCMQITEPLEFSIFPTLLLVATLFRLGLDVSATRMILLFGYVKDPVTKEATGAGHLIPAFGQVVVGGNLVVGVIMFLILIIIQLIVITKGAERIAGVAARFTLDAMPLKLMAIEGELASGAVSQDKALAKREKVQQESDFFASMDGAGKFVQGDAIAAIVIMAINILGGVVIG 618
+V IV+M+I+PLPT++LD LL LN+ L++ ++V + EPL+FS+FP+LLLVATLFRL L+VS+TR+ILL GY AG +I AFG VVGGN VVG I+F+ILIIIQ +VITKGAER+A V+ARFTLDAMP K MAI+ +L G ++ +A A+REK+Q E+DF+ +MDGA KFV+GDAIAAI+I+ INI GG +IG
Sbjct: 24 IVTIVIMMIIPLPTFLLDLLLCLNITLALTVVMVTIYNVEPLDFSVFPSLLLVATLFRLALNVSSTRLILLNGY-----------AGEVIMAFGNFVVGGNPVVGFIVFVILIIIQFVVITKGAERVAEVSARFTLDAMPGKQMAIDADLNQGIINDAEAKARREKIQHEADFYGAMDGASKFVKGDAIAAIIIIIINIFGGFIIG 218
BLAST of mRNA_P-wetherbeei_contig21000.1.1 vs. uniprot
Match: A0A1W6DTW0_9MICO (EscV/YscV/HrcV family type III secretion system export apparatus protein n=15 Tax=Promicromonosporaceae TaxID=85017 RepID=A0A1W6DTW0_9MICO) HSP 1 Score: 211 bits (536), Expect = 6.010e-61 Identity = 119/207 (57.49%), Postives = 162/207 (78.26%), Query Frame = 1
Query: 1 VVGIVLMLIVPLPTYILDGLLVLNLLLSVATILVCMQITEPLEFSIFPTLLLVATLFRLGLDVSATRMILLFGYVKDPVTKEATGAGHLIPAFGQVVVGGNLVVGVIMFLILIIIQLIVITKGAERIAGVAARFTLDAMPLKLMAIEGELASGAVSQDKALAKREKVQQESDFFASMDGAGKFVQGDAIAAIVIMAINILGGVVIGV 621
VVGIVL+L+VP+P +LD L+++N+LLS+ +L M + +PL+FS+FP+LLLVATLFRLGL+V++TR++L GY AG +I AFG +VV GNLV+G+++FLIL++IQ +VITKGAER+A V ARFTLDAMP K MAI+ +L +G +S+ A A+R ++ ESDF+ +MDGA KFV+GDAIA IVI IN+LGG+VIGV
Sbjct: 15 VVGIVLLLVVPIPAALLDVLIIVNILLSLVILLTSMFVKKPLDFSVFPSLLLVATLFRLGLNVASTRLVLGDGY-----------AGEVIGAFGHIVVDGNLVIGMVVFLILVVIQFLVITKGAERVAEVGARFTLDAMPGKQMAIDADLNAGLISEQDARARRAEISAESDFYGAMDGASKFVKGDAIAGIVITLINLLGGIVIGV 210 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig21000.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig21000.1.1 >prot_P-wetherbeei_contig21000.1.1 ID=prot_P-wetherbeei_contig21000.1.1|Name=mRNA_P-wetherbeei_contig21000.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=201bp MLIVPLPTYILDGLLVLNLLLSVATILVCMQITEPLEFSIFPTLLLVATLback to top mRNA from alignment at P-wetherbeei_contig21000:8..628- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig21000.1.1 ID=mRNA_P-wetherbeei_contig21000.1.1|Name=mRNA_P-wetherbeei_contig21000.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=621bp|location=Sequence derived from alignment at P-wetherbeei_contig21000:8..628- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig21000:8..628- >mRNA_P-wetherbeei_contig21000.1.1 ID=mRNA_P-wetherbeei_contig21000.1.1|Name=mRNA_P-wetherbeei_contig21000.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=603bp|location=Sequence derived from alignment at P-wetherbeei_contig21000:8..628- (Phaeothamnion wetherbeei SAG_119_79)back to top |