mRNA_P-wetherbeei_contig20953.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20953.2.1 vs. uniprot
Match: UPI0004880545 (calcium-binding protein n=1 Tax=Enterovibrio calviensis TaxID=91359 RepID=UPI0004880545) HSP 1 Score: 53.9 bits (128), Expect = 4.530e-6 Identity = 34/80 (42.50%), Postives = 47/80 (58.75%), Query Frame = 1
Query: 154 ADTFEFFVVAWPNGDTEGNDRILDFQDGVDHIHLRGSVD-GMSEMTLTQVGGDTLITYDGIGGSLTLVGVNAGSITASDF 390
ADTF F + G+ GNDRI+DF+ G+D I +R + D ++LTQVG +TL+ G S L G+ A +TA DF
Sbjct: 127 ADTFRFDNIL---GNQTGNDRIVDFEVGIDSIFIRATGDTDFDSLSLTQVGSNTLVDLAD-GSSFILNGITATDLTADDF 202
BLAST of mRNA_P-wetherbeei_contig20953.2.1 vs. uniprot
Match: UPI001EE1F6A1 (calcium-binding protein n=1 Tax=Mesobacterium pallidum TaxID=2872037 RepID=UPI001EE1F6A1) HSP 1 Score: 54.7 bits (130), Expect = 5.090e-6 Identity = 32/71 (45.07%), Postives = 43/71 (60.56%), Query Frame = 1
Query: 196 DTEGNDRILDFQDGVDHIHLRG----SVDGMSEMTLTQVGGDTLITYDGIGGSLTLVGVNAGSITASDFDF 396
D G D I DF+DG+D + G V G ++ +TQVG DTL+T++ +LTL GV+A SI A DF F
Sbjct: 401 DRAGYDTITDFEDGIDLVDGTGLGPLGVTGFGDLVITQVGADTLVTFNDYN-ALTLAGVDAASIGADDFLF 470
BLAST of mRNA_P-wetherbeei_contig20953.2.1 vs. uniprot
Match: UPI00131C85F5 (hypothetical protein n=1 Tax=Chachezhania sediminis TaxID=2599291 RepID=UPI00131C85F5) HSP 1 Score: 53.9 bits (128), Expect = 9.370e-6 Identity = 32/73 (43.84%), Postives = 46/73 (63.01%), Query Frame = 1
Query: 178 VAWPNGDTEGNDRILDFQDGVDHIHLRGSVDGMSEMTLTQVGGDTLITYDGIGGSLTLVGVNAGSITASDFDF 396
V P+G GND I F+DG D I + G+ + + +T+ + GD LI YDG G++TL+G A ++TASDF F
Sbjct: 385 VFGPHG---GNDAIRGFKDGKDRIKIVGTGESFASLTIEKDAGDLLIDYDG--GTITLLGDAATTLTASDFIF 452
BLAST of mRNA_P-wetherbeei_contig20953.2.1 vs. uniprot
Match: UPI00140DE1FB (calcium-binding protein n=1 Tax=Rhodobacter sp. M37P TaxID=2715277 RepID=UPI00140DE1FB) HSP 1 Score: 53.9 bits (128), Expect = 9.520e-6 Identity = 31/80 (38.75%), Postives = 49/80 (61.25%), Query Frame = 1
Query: 157 DTFEFFVVAWPNGDTEGNDRILDFQDGVDHIHLRGSVDGMSEMTLTQVGGDTLITYDGIGGSLTLVGVNAGSITASDFDF 396
DTF F + A G D + DFQ+G+D + +RG ++++T+ Q G +T+++ G+ +TL+GV AG I ASDF F
Sbjct: 423 DTFVFRLRA-------GADTVEDFQNGLDRLDVRGLAASLADVTVAQSGANTVLSAGGV--QITLIGVAAGQIDASDFLF 493
BLAST of mRNA_P-wetherbeei_contig20953.2.1 vs. uniprot
Match: A0A8J7M9Q5_9RHOB (M10 family metallopeptidase C-terminal domain-containing protein n=1 Tax=Thermohalobaculum xanthum TaxID=2753746 RepID=A0A8J7M9Q5_9RHOB) HSP 1 Score: 52.4 bits (124), Expect = 1.410e-5 Identity = 28/69 (40.58%), Postives = 41/69 (59.42%), Query Frame = 1
Query: 196 DTEGNDRILDFQDGVDHIHLRG--SVDGMSEMTLTQVGGDTLITYDGIGGSLTLVGVNAGSITASDFDF 396
D +GND ILDF+DG+D I G V G ++ ++ GG +L+T + S+ + GV G +TA DF F
Sbjct: 118 DLDGNDTILDFEDGIDLIQFDGITGVAGFGDLVISASGGGSLVTAGSV--SVLVAGVATGDLTADDFSF 184
BLAST of mRNA_P-wetherbeei_contig20953.2.1 vs. uniprot
Match: A0A562NRX5_9RHOB (Hemolysin type calcium-binding protein n=1 Tax=Paracoccus sulfuroxidans TaxID=384678 RepID=A0A562NRX5_9RHOB) HSP 1 Score: 53.1 bits (126), Expect = 1.920e-5 Identity = 28/67 (41.79%), Postives = 45/67 (67.16%), Query Frame = 1
Query: 205 GNDRILDFQDGVDHIHLRGSVDGMSEMTLTQVGGD---TLITYDGIGGSLTLVGVNAGSITASDFDF 396
GNDR+ DFQDG+D + +R + S++ +T + T++T+ G ++TLVGV+ +ITASDF+F
Sbjct: 888 GNDRVTDFQDGIDRVVIRTGAENFSQVNVTYDPNNYSNTVLTFGGT--TVTLVGVSYWNITASDFEF 952
BLAST of mRNA_P-wetherbeei_contig20953.2.1 vs. uniprot
Match: A0A2E2PBE4_9RHOB (Uncharacterized protein n=1 Tax=Pseudooceanicola sp. TaxID=1914328 RepID=A0A2E2PBE4_9RHOB) HSP 1 Score: 52.8 bits (125), Expect = 2.440e-5 Identity = 33/81 (40.74%), Postives = 46/81 (56.79%), Query Frame = 1
Query: 154 ADTFEFFVVAWPNGDTEGNDRILDFQDGVDHIHLRGSVDGMSEMTLTQVGGDTLITYDGIGGSLTLVGVNAGSITASDFDF 396
ADTF F +A EG DRI+ FQDG+DHI + GS +++ G L+T +G G + L G+ G +T +DFDF
Sbjct: 466 ADTFVFDGLA-----DEGRDRIIGFQDGIDHIRVTGSSFANTQIDSFGANG-ALVTLEG-GTEIVLKGITPGQLTHADFDF 539
BLAST of mRNA_P-wetherbeei_contig20953.2.1 vs. uniprot
Match: A0A1H1IR52_9HYPH (Hemolysin-type calcium-binding repeat-containing protein n=1 Tax=Pseudovibrio sp. Tun.PSC04-5.I4 TaxID=1798213 RepID=A0A1H1IR52_9HYPH) HSP 1 Score: 52.8 bits (125), Expect = 2.480e-5 Identity = 26/64 (40.62%), Postives = 36/64 (56.25%), Query Frame = 1
Query: 205 GNDRILDFQDGVDHIHLRGSVDGMSEMTLTQVGGDTLITYDGIGGSLTLVGVNAGSITASDFDF 396
GND I DF DGVD I ++T++ VG D +ITY+G +T+ GV+A + DF F
Sbjct: 541 GNDEITDFTDGVDFIEFESGATSFEDLTISSVGSDAVITYEG--SVITVTGVDASLLGVDDFAF 602
BLAST of mRNA_P-wetherbeei_contig20953.2.1 vs. uniprot
Match: A0A3M1T9G4_9CYAN (Calcium-binding protein n=1 Tax=Cyanobacteria bacterium J055 TaxID=2420338 RepID=A0A3M1T9G4_9CYAN) HSP 1 Score: 52.0 bits (123), Expect = 4.370e-5 Identity = 32/65 (49.23%), Postives = 44/65 (67.69%), Query Frame = 1
Query: 202 EGNDRILDFQDGVDHIHLRGSVDGMS--EMTLTQVGGDTLITYDGIGGSLTLVGVNAGSITASDF 390
+GN+ + DF DGVD I LR DG++ E+T+ QVG DT+IT G+ S+ L GVN G I+ +DF
Sbjct: 382 DGNNFVTDFTDGVDIIGLR---DGLTFAELTIVQVGNDTVITAAGL--SIALQGVNIGIISEADF 441
BLAST of mRNA_P-wetherbeei_contig20953.2.1 vs. uniprot
Match: A0A368YNE8_9RHOB (Hemolysin type calcium-binding protein n=2 Tax=Paracoccus lutimaris TaxID=1490030 RepID=A0A368YNE8_9RHOB) HSP 1 Score: 52.0 bits (123), Expect = 4.770e-5 Identity = 27/66 (40.91%), Postives = 43/66 (65.15%), Query Frame = 1
Query: 205 GNDRILDFQDGVDHIHLRGSV--DGMSEMTLTQVGGDTLITYDGIGGSLTLVGVNAGSITASDFDF 396
G+D+I +++G DHI +RG D S++T+ VGG ++++ G S+TLVGV+ + ASDF F
Sbjct: 752 GSDQIRGWENGSDHIVIRGGTTYDEFSDLTIRSVGGHAVVSFGGT--SITLVGVSVAQVDASDFQF 815 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20953.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20953.2.1 >prot_P-wetherbeei_contig20953.2.1 ID=prot_P-wetherbeei_contig20953.2.1|Name=mRNA_P-wetherbeei_contig20953.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=135bp LKGRDGDDTLDGGGGRDTLRGEEGNDTLLGGSGNDVLVGGDGDDTLAGGLback to top mRNA from alignment at P-wetherbeei_contig20953:786..1190- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20953.2.1 ID=mRNA_P-wetherbeei_contig20953.2.1|Name=mRNA_P-wetherbeei_contig20953.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=405bp|location=Sequence derived from alignment at P-wetherbeei_contig20953:786..1190- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20953:786..1190- >mRNA_P-wetherbeei_contig20953.2.1 ID=mRNA_P-wetherbeei_contig20953.2.1|Name=mRNA_P-wetherbeei_contig20953.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=405bp|location=Sequence derived from alignment at P-wetherbeei_contig20953:786..1190- (Phaeothamnion wetherbeei SAG_119_79)back to top |