mRNA_P-wetherbeei_contig20919.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20919.1.1
Unique NamemRNA_P-wetherbeei_contig20919.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20919.1.1 vs. uniprot
Match: A0A845BHS3_9PROT (HNH endonuclease n=2 Tax=Roseomonas coralli TaxID=2545983 RepID=A0A845BHS3_9PROT)

HSP 1 Score: 395 bits (1014), Expect = 7.480e-136
Identity = 193/288 (67.01%), Postives = 233/288 (80.90%), Query Frame = 1
Query:    1 MKVIFDTRAESQYDDDIVQRYHFPNRYLPAARQAVGDWIVYREPRRAGGRSGYVAVARLLLVEPDSETPGFSYARIADFLPFDAVVPLRHGAGFYERQLGFVPKPSLIGASLRGKSIRIISDEEFASIVLAGLTKTLAPDNAIRLELDASHVDRETMELIAASEAEQERRIVQILVNRKIREASFRRQVIDAYENTCAVTRLKIVNGGGKAEAQAAHIWPVAGGGPDVIQNGIALSATAHWLFDRHLISLTDDRGLLVAHNRVPSELQSLFQNQLQRIHLPKNQALWP 864
            MK  FDTRA + YDDDI  RYHFPNRYL  A++++GDWIVYREPRR GGR GYVAVARL+ + P+   PGF+YA IAD+LPFDAVVPLR   GFYE  LG V  PS IGA+++G+S+R ++D EF +IV AGL +TLAP+NAIRLELD  ++D E   L+ A   EQERRI Q+LVNRKIR+A+FR+ V+D Y+  CAVT L+++NG GKAEAQAAHI PVA GGPDV+QNGIALSAT HWLFDRHLISLTD+ GLLV+HNRVPSEL+ LF+ Q+ RIHLPK++ LWP
Sbjct:    1 MKGAFDTRAGTVYDDDITCRYHFPNRYLETAKRSLGDWIVYREPRRGGGREGYVAVARLVDLVPNPAKPGFTYAVIADYLPFDAVVPLRRPGGFYEGFLGQVENPSRIGAAMQGRSLRTVTDAEFGAIVRAGLRETLAPENAIRLELDPGYLDAEARALVEAPPEEQERRIAQVLVNRKIRDAAFRKSVVDIYDGRCAVTSLRLINGSGKAEAQAAHIMPVAAGGPDVVQNGIALSATVHWLFDRHLISLTDEMGLLVSHNRVPSELRGLFEKQMDRIHLPKDRTLWP 288          
BLAST of mRNA_P-wetherbeei_contig20919.1.1 vs. uniprot
Match: A0A537N676_9PROT (HNH endonuclease (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537N676_9PROT)

HSP 1 Score: 373 bits (957), Expect = 1.100e-127
Identity = 184/270 (68.15%), Postives = 216/270 (80.00%), Query Frame = 1
Query:    1 MKVIFDTRAESQYDDDIVQRYHFPNRYLPAARQAVGDWIVYREPRRAGGRSGYVAVARLLLVEPDSETPGFSYARIADFLPFDAVVPLRHGAGFYERQLGFVPKPSLIGASLRGKSIRIISDEEFASIVLAGLTKTLAPDNAIRLELDASHVDRETMELIAASEAEQERRIVQILVNRKIREASFRRQVIDAYENTCAVTRLKIVNGGGKAEAQAAHIWPVAGGGPDVIQNGIALSATAHWLFDRHLISLTDDRGLLVAHNRVPSELQSL 810
            MK +FDTR  S YDD+I  RYHFP+RYL  AR+AVGDW+VYR PRR GG+ GY A AR+  +EPD      SY R+ DFLPFDA+VPL   +GFYERQL FV K SLIG +L+G+S+R IS+ EF  IV  GL +TL P NA+RLELD SHVD ET  L+ A E EQERR+VQIL+NRKIR+ASFRRQV +AY+NTCA+T L++VNGGGKAE QAAHIW VA GGPDV+QNG+ALSAT HWLFDR+LISLTDD GLLV+HNRVP+ELQ L
Sbjct:    1 MKAVFDTRPGSGYDDEIQTRYHFPDRYLDEARKAVGDWVVYRAPRRGGGKIGYFAAARVASIEPDPNLSAHSYTRMTDFLPFDAIVPLERSSGFYERQLDFVTKRSLIGRTLQGRSVRTISEIEFGDIVRDGLGETLDPANAVRLELDPSHVDPETFALLNAEEEEQERRVVQILMNRKIRDASFRRQVCEAYDNTCAITGLRMVNGGGKAEVQAAHIWSVAAGGPDVVQNGLALSATVHWLFDRYLISLTDDYGLLVSHNRVPAELQPL 270          
BLAST of mRNA_P-wetherbeei_contig20919.1.1 vs. uniprot
Match: A0A537PZN8_9PROT (HNH endonuclease n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537PZN8_9PROT)

HSP 1 Score: 372 bits (955), Expect = 6.980e-127
Identity = 184/288 (63.89%), Postives = 225/288 (78.12%), Query Frame = 1
Query:    1 MKVIFDTRAESQYDDDIVQRYHFPNRYLPAARQAVGDWIVYREPRRAGGRSGYVAVARLLLVEPDSETPGFSYARIADFLPFDAVVPLRHGAGFYERQLGFVPKPSLIGASLRGKSIRIISDEEFASIVLAGLTKTLAPDNAIRLELDASHVDRETMELIAASEAEQERRIVQILVNRKIREASFRRQVIDAYENTCAVTRLKIVNGGGKAEAQAAHIWPVAGGGPDVIQNGIALSATAHWLFDRHLISLTDDRGLLVAHNRVPSELQSLFQNQLQRIHLPKNQALWP 864
            MK IFDT+A S YDD+IV+RYHFP +Y   A Q +GDWIVYREP+R GGR  Y+AVAR+L +E DS   G+SYA ++D+LPFD  VP  +   + E  L  +  PS +GA L+GKSIRIIS+ +FA+IV  GL +TLAP NAIRLELD   +D ET+E + A   EQ RRI QIL+NRKIR+A+FRR V +AY+N CAVTRL+IVNGGGKAE QAAHIW VA GGPDV+QNG+ALS+TAHWLFDRHLISLTDD GLL++HN+VP+EL+ LF  QL+RIHLP +  LWP
Sbjct:    1 MKGIFDTKANSGYDDEIVRRYHFPPQYRTVAAQLIGDWIVYREPQRNGGRRAYIAVARVLRIEADSRRAGYSYAVVSDYLPFDRPVPFVNKGAYAEAALREIGNPSRVGAYLQGKSIRIISEADFAAIVRTGLGETLAPPNAIRLELDRLELDEETVEYLTAPPVEQARRIEQILLNRKIRDANFRRHVCEAYDNRCAVTRLRIVNGGGKAEVQAAHIWSVASGGPDVVQNGLALSSTAHWLFDRHLISLTDDYGLLISHNKVPAELRGLFSKQLERIHLPDDPRLWP 288          
BLAST of mRNA_P-wetherbeei_contig20919.1.1 vs. uniprot
Match: UPI0009312AC9 (HNH endonuclease n=1 Tax=Hyphomicrobium sp. CS1GBMeth3 TaxID=1892845 RepID=UPI0009312AC9)

HSP 1 Score: 372 bits (954), Expect = 9.910e-127
Identity = 183/288 (63.54%), Postives = 225/288 (78.12%), Query Frame = 1
Query:    1 MKVIFDTRAESQYDDDIVQRYHFPNRYLPAARQAVGDWIVYREPRRAGGRSGYVAVARLLLVEPDSETPGFSYARIADFLPFDAVVPLRHGAGFYERQLGFVPKPSLIGASLRGKSIRIISDEEFASIVLAGLTKTLAPDNAIRLELDASHVDRETMELIAASEAEQERRIVQILVNRKIREASFRRQVIDAYENTCAVTRLKIVNGGGKAEAQAAHIWPVAGGGPDVIQNGIALSATAHWLFDRHLISLTDDRGLLVAHNRVPSELQSLFQNQLQRIHLPKNQALWP 864
            MK +FDT+ ES YDDDI +RYHFP +Y   A   VG WIVYREP+R  GR  YVAVAR++ +E D+  PG +YA +AD+LPFD  VP   G  + E  L  +  PS IGA L+GKSIR +SDE+FA+I   G  +TLAP+NA+R ELD  HVDR T EL+AA   EQERRI QILVNRKIR+ASFR QV +AY++TCA+TRLKI+NGGG++EAQAAHIWPVA GGPDV+QNGIALS+T HWLFDRHLISL DD  +LV+HN+VP+EL+SLF +Q+ R+HLPK++ LWP
Sbjct:    1 MKGVFDTKPESGYDDDISRRYHFPRQYRAVADTLVGSWIVYREPQRNHGRRAYVAVARVVWIEADAARPGHAYAHVADYLPFDRPVPFVDGGRYAETPLRAIAVPSRIGAYLQGKSIRTLSDEDFAAIARKGFGETLAPENAMRRELDVGHVDRATQELLAAPLEEQERRIEQILVNRKIRDASFRGQVCEAYDSTCAITRLKIINGGGRSEAQAAHIWPVAEGGPDVVQNGIALSSTVHWLFDRHLISLADDYRILVSHNKVPAELRSLFAHQMDRVHLPKDERLWP 288          
BLAST of mRNA_P-wetherbeei_contig20919.1.1 vs. uniprot
Match: A0A512NM79_9HYPH (Restriction endonuclease n=1 Tax=Reyranella soli TaxID=1230389 RepID=A0A512NM79_9HYPH)

HSP 1 Score: 371 bits (952), Expect = 2.070e-126
Identity = 187/288 (64.93%), Postives = 223/288 (77.43%), Query Frame = 1
Query:    1 MKVIFDTRAESQYDDDIVQRYHFPNRYLPAARQAVGDWIVYREPRRAGGRSGYVAVARLLLVEPDSETPGFSYARIADFLPFDAVVPLRHGAGFYERQLGFVPKPSLIGASLRGKSIRIISDEEFASIVLAGLTKTLAPDNAIRLELDASHVDRETMELIAASEAEQERRIVQILVNRKIREASFRRQVIDAYENTCAVTRLKIVNGGGKAEAQAAHIWPVAGGGPDVIQNGIALSATAHWLFDRHLISLTDDRGLLVAHNRVPSELQSLFQNQLQRIHLPKNQALWP 864
            MK IFD R  + YDD+I  RYHFPN+YL  ARQ VGDWIVYR PRR GG  GY A AR++ +EPD      SYAR++DFL FD VVPL    GFYERQL  V + SL G +L+GKS+R I + EF+ IV AGL +TL P NA++LELD +H   ET+ L+ A   EQERRIVQIL+NRK+R+A+FRR V +AYENTCAVTRL+++NGGGK+EAQAAHIWPV  GGPDV+QNG+ALSATAHWLFDRHLISLTDD GLLV+HNRVP ELQ LF+ Q +RI LP ++  WP
Sbjct:    1 MKGIFDARPGTVYDDEIQTRYHFPNQYLEEARQTVGDWIVYRAPRRGGGPVGYFACARVVYIEPDPADRTHSYARMSDFLEFDKVVPLARPGGFYERQLELVERRSL-GRTLQGKSVRTIHNMEFSDIVRAGLQETLDPANAVKLELDPTHASSETLALVNAPAEEQERRIVQILMNRKVRDANFRRHVCEAYENTCAVTRLRMINGGGKSEAQAAHIWPVVQGGPDVVQNGLALSATAHWLFDRHLISLTDDYGLLVSHNRVPVELQMLFEKQRERIRLPDDRRKWP 287          
BLAST of mRNA_P-wetherbeei_contig20919.1.1 vs. uniprot
Match: A0A090E4M6_MESPL (HNHc domain-containing protein n=1 Tax=Mesorhizobium plurifarium TaxID=69974 RepID=A0A090E4M6_MESPL)

HSP 1 Score: 367 bits (942), Expect = 6.600e-125
Identity = 176/288 (61.11%), Postives = 224/288 (77.78%), Query Frame = 1
Query:    1 MKVIFDTRAESQYDDDIVQRYHFPNRYLPAARQAVGDWIVYREPRRAGGRSGYVAVARLLLVEPDSETPGFSYARIADFLPFDAVVPLRHGAGFYERQLGFVPKPSLIGASLRGKSIRIISDEEFASIVLAGLTKTLAPDNAIRLELDASHVDRETMELIAASEAEQERRIVQILVNRKIREASFRRQVIDAYENTCAVTRLKIVNGGGKAEAQAAHIWPVAGGGPDVIQNGIALSATAHWLFDRHLISLTDDRGLLVAHNRVPSELQSLFQNQLQRIHLPKNQALWP 864
            MK IFDT+  S YDD+I ++YHFP +Y   A Q VG+WI+YREP+R  GR  Y+A AR+L V+PD   P FSYA + D+LPFD  VP   G G+ E  L  V  PS +GA L+GKSIR++S+ +FA IV +GL +TLAP+N++RLELD  HVD +T+ L+ A   EQ RRI QIL+NRK+R+ASFRRQV DAY+N CAVT L+++NGGGKAE QAAHIWPVA GGPDV+QNG+ALS T HWLFDRHLISLTDD  LLV+HN+VPS+L++LF  Q++ +HLPK+++LWP
Sbjct:    1 MKGIFDTKRNSGYDDEITRQYHFPPQYRAIADQLVGNWIIYREPQRNQGRRAYIAAARVLRVDPDPARPSFSYALMGDYLPFDQPVPFAGGGGYREAALREVEDPSRVGAFLQGKSIRLVSEADFAGIVRSGLDETLAPENSVRLELDPLHVDHDTLSLVQAPPEEQARRIEQILLNRKVRDASFRRQVCDAYDNRCAVTGLRMINGGGKAEVQAAHIWPVASGGPDVVQNGLALSGTVHWLFDRHLISLTDDYRLLVSHNKVPSDLRTLFARQMEHLHLPKDRSLWP 288          
BLAST of mRNA_P-wetherbeei_contig20919.1.1 vs. uniprot
Match: A0A1M6VMJ6_9BRAD (Putative restriction endonuclease n=1 Tax=Bradyrhizobium lablabi TaxID=722472 RepID=A0A1M6VMJ6_9BRAD)

HSP 1 Score: 365 bits (938), Expect = 2.680e-124
Identity = 182/288 (63.19%), Postives = 219/288 (76.04%), Query Frame = 1
Query:    1 MKVIFDTRAESQYDDDIVQRYHFPNRYLPAARQAVGDWIVYREPRRAGGRSGYVAVARLLLVEPDSETPGFSYARIADFLPFDAVVPLRHGAGFYERQLGFVPKPSLIGASLRGKSIRIISDEEFASIVLAGLTKTLAPDNAIRLELDASHVDRETMELIAASEAEQERRIVQILVNRKIREASFRRQVIDAYENTCAVTRLKIVNGGGKAEAQAAHIWPVAGGGPDVIQNGIALSATAHWLFDRHLISLTDDRGLLVAHNRVPSELQSLFQNQLQRIHLPKNQALWP 864
            MK IFDT+A S YDD+IV+RYHFP +Y   A+Q +GDWIVYREP+R GGR  Y+AVAR+  +E D    G+SYA + ++LPFD  VP  +   + E  L  +  PS +GA L+GKSIRI+SD +F  IV AGL +T+ P NA+R ELD    D ET++L+ A  AEQERRI QILVNRKIREASFRR V +AY+N CAVT L+IVNGGGKAE QAAHIW VA GGPDV+QNG+ALS TAHWLFDRHLISLTDD GLLV+HN+VP+EL+SLF   L RIHLP +  LWP
Sbjct:    1 MKGIFDTKANSGYDDEIVRRYHFPPQYRTVAQQLIGDWIVYREPQRNGGRRAYIAVARVQRIEADPLRAGYSYALVDEYLPFDRPVPFANNGAYAEAALREISNPSRVGAYLQGKSIRIVSDADFEEIVRAGLGETIGPANAVRPELDPYQFDEETLDLLGAPPAEQERRIEQILVNRKIREASFRRHVCEAYDNRCAVTGLRIVNGGGKAEVQAAHIWSVASGGPDVVQNGLALSGTAHWLFDRHLISLTDDYGLLVSHNKVPAELRSLFSKHLDRIHLPDDPRLWP 288          
BLAST of mRNA_P-wetherbeei_contig20919.1.1 vs. uniprot
Match: UPI0018C1E2A2 (HNH endonuclease n=1 Tax=Methylosinus sp. H3A TaxID=2785786 RepID=UPI0018C1E2A2)

HSP 1 Score: 360 bits (924), Expect = 3.590e-122
Identity = 176/288 (61.11%), Postives = 222/288 (77.08%), Query Frame = 1
Query:    1 MKVIFDTRAESQYDDDIVQRYHFPNRYLPAARQAVGDWIVYREPRRAGGRSGYVAVARLLLVEPDSETPGFSYARIADFLPFDAVVPLRHGAGFYERQLGFVPKPSLIGASLRGKSIRIISDEEFASIVLAGLTKTLAPDNAIRLELDASHVDRETMELIAASEAEQERRIVQILVNRKIREASFRRQVIDAYENTCAVTRLKIVNGGGKAEAQAAHIWPVAGGGPDVIQNGIALSATAHWLFDRHLISLTDDRGLLVAHNRVPSELQSLFQNQLQRIHLPKNQALWP 864
            MK IFDT+ +S YDD+I +RYHFP +Y   A + VGDWI+YREP+R  GR  Y+AVARLL +E D E PG+SYA ++++LPFD  VP   G  + E  L  +  PS +GA L+GKS+R ISD +FA+I  AGL +TL+P+NA+RL LD   VD +T+EL+ A   EQ RRI QIL+NRKIR+A+FRRQV DAY++ CAVT L+IVNGGG+AE QAAHIW VA GGPDV+QNG+ALS T HWLFDRHLISLTDD  LLV+HN++P+EL+ LF  Q+ RIHLPK++ LWP
Sbjct:    1 MKGIFDTKPDSGYDDEITRRYHFPRQYREVAERLVGDWIIYREPQRNRGRRAYIAVARLLRLENDPERPGYSYALMSEYLPFDRPVPFADGGTYAEAALRELTDPSRVGAYLQGKSVRTISDSDFATIARAGLAETLSPENALRLVLDPGQVDPDTLELVRAPPEEQARRIEQILLNRKIRDANFRRQVCDAYDDRCAVTGLRIVNGGGRAEVQAAHIWSVALGGPDVVQNGLALSGTVHWLFDRHLISLTDDYRLLVSHNKIPAELRDLFAKQMDRIHLPKDEKLWP 288          
BLAST of mRNA_P-wetherbeei_contig20919.1.1 vs. uniprot
Match: UPI000407893D (HNH endonuclease n=2 Tax=Mesorhizobium TaxID=68287 RepID=UPI000407893D)

HSP 1 Score: 362 bits (928), Expect = 6.820e-122
Identity = 179/288 (62.15%), Postives = 223/288 (77.43%), Query Frame = 1
Query:    1 MKVIFDTRAESQYDDDIVQRYHFPNRYLPAARQAVGDWIVYREPRRAGGRSGYVAVARLLLVEPDSETPGFSYARIADFLPFDAVVPLRHGAGFYERQLGFVPKPSLIGASLRGKSIRIISDEEFASIVLAGLTKTLAPDNAIRLELDASHVDRETMELIAASEAEQERRIVQILVNRKIREASFRRQVIDAYENTCAVTRLKIVNGGGKAEAQAAHIWPVAGGGPDVIQNGIALSATAHWLFDRHLISLTDDRGLLVAHNRVPSELQSLFQNQLQRIHLPKNQALWP 864
            +K IFDT+A S YDD+I +RYHFP +Y   A + VG+WIVYREP+R  GR  Y+AVAR+L ++PD   PG+SYA + D+LPFD  VP   GA + E  L  +  PS +GA L+GKSIR IS+ +FA+I  AG  +TLAP+NA+RLELD  HVD ET++L+ A   +Q RRI QILVNRK+R+A+FRRQ+ +AY+N CAVT L++VNGGGKAE QAAHIWPVA GGPDV+QNG+ALS T HWLFDRHLISLTDD  LLV+HN+VP EL+SLF  QL RIHLP++  LWP
Sbjct:   62 LKGIFDTKANSGYDDEITRRYHFPPQYRAIAERLVGEWIVYREPQRNRGRRAYIAVARVLRIDPDPGRPGYSYALVEDYLPFDRPVPFS-GAFYAEAALREIGNPSRVGAYLQGKSIRTISEADFAAIARAGFDETLAPENAVRLELDYRHVDPETLDLLRAPPEDQARRIEQILVNRKVRDANFRRQICEAYDNRCAVTGLRMVNGGGKAEVQAAHIWPVASGGPDVVQNGLALSGTVHWLFDRHLISLTDDYRLLVSHNKVPDELRSLFALQLDRIHLPQDPKLWP 348          
BLAST of mRNA_P-wetherbeei_contig20919.1.1 vs. uniprot
Match: A0A1G6EKC6_9HYPH (Putative restriction endonuclease n=2 Tax=Bauldia litoralis TaxID=665467 RepID=A0A1G6EKC6_9HYPH)

HSP 1 Score: 353 bits (907), Expect = 4.240e-120
Identity = 175/254 (68.90%), Postives = 207/254 (81.50%), Query Frame = 1
Query:  103 VGDWIVYREPRRAGGRSGYVAVARLLLVEPDSETPGFSYARIADFLPFDAVVPLRHGAGFYERQLGFVPKPSLIGASLRGKSIRIISDEEFASIVLAGLTKTLAPDNAIRLELDASHVDRETMELIAASEAEQERRIVQILVNRKIREASFRRQVIDAYENTCAVTRLKIVNGGGKAEAQAAHIWPVAGGGPDVIQNGIALSATAHWLFDRHLISLTDDRGLLVAHNRVPSELQSLFQNQLQRIHLPKNQALWP 864
            +GDWIVYREPRR  GR GYVAVAR+  +E D    GFSYA + DFLPFD VV LR GA FYER+L  V  PS IGA+L+G+SIR IS++EF +I +AGL +TL P NAIRLELD+ H D E + +++A+  EQERRI Q+LVNRKIR+A+FRR V+DAY+  CAVTRL+I+NGGGKAEAQAAHIWPVA GGPDV+QNGIALSAT HWLFDRHLISLTDD GLLV+HN+VPSEL+ LF  QL RIHLP ++ LWP
Sbjct:    1 MGDWIVYREPRRGNGREGYVAVARVTQIESDPSKSGFSYAYVDDFLPFDVVVSLRRGARFYERKLNEVENPSRIGAALQGRSIRTISEDEFGAIAVAGLHETLDPANAIRLELDSRHADAEVLAMVSAAPEEQERRIAQMLVNRKIRDAAFRRAVVDAYDGRCAVTRLRIINGGGKAEAQAAHIWPVAEGGPDVVQNGIALSATCHWLFDRHLISLTDDFGLLVSHNKVPSELRVLFAQQLDRIHLPVDRQLWP 254          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20919.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A845BHS3_9PROT7.480e-13667.01HNH endonuclease n=2 Tax=Roseomonas coralli TaxID=... [more]
A0A537N676_9PROT1.100e-12768.15HNH endonuclease (Fragment) n=1 Tax=Alphaproteobac... [more]
A0A537PZN8_9PROT6.980e-12763.89HNH endonuclease n=1 Tax=Alphaproteobacteria bacte... [more]
UPI0009312AC99.910e-12763.54HNH endonuclease n=1 Tax=Hyphomicrobium sp. CS1GBM... [more]
A0A512NM79_9HYPH2.070e-12664.93Restriction endonuclease n=1 Tax=Reyranella soli T... [more]
A0A090E4M6_MESPL6.600e-12561.11HNHc domain-containing protein n=1 Tax=Mesorhizobi... [more]
A0A1M6VMJ6_9BRAD2.680e-12463.19Putative restriction endonuclease n=1 Tax=Bradyrhi... [more]
UPI0018C1E2A23.590e-12261.11HNH endonuclease n=1 Tax=Methylosinus sp. H3A TaxI... [more]
UPI000407893D6.820e-12262.15HNH endonuclease n=2 Tax=Mesorhizobium TaxID=68287... [more]
A0A1G6EKC6_9HYPH4.240e-12068.90Putative restriction endonuclease n=2 Tax=Bauldia ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20919contigP-wetherbeei_contig20919:1..864 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog492774.JQMB01000001_gene6174
PFAMsHNH_2
Model size864
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K07454
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.12e-120
EggNOG OGsCOG3440@1|root,COG3440@2|Bacteria,1NE0N@1224|Proteobacteria,2TV2B@28211|Alphaproteobacteria,4BDVT@82115|Rhizobiaceae
DescriptionHNH endonuclease
Cds size864
COG categoryV
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186211.982982-CDS-P-wetherbeei_contig20919:0..8641683186211.982982-CDS-P-wetherbeei_contig20919:0..864Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20919 1..864 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20919.1.1prot_P-wetherbeei_contig20919.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20919 1..864 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20919.1.1

>prot_P-wetherbeei_contig20919.1.1 ID=prot_P-wetherbeei_contig20919.1.1|Name=mRNA_P-wetherbeei_contig20919.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=288bp
MKVIFDTRAESQYDDDIVQRYHFPNRYLPAARQAVGDWIVYREPRRAGGR
SGYVAVARLLLVEPDSETPGFSYARIADFLPFDAVVPLRHGAGFYERQLG
FVPKPSLIGASLRGKSIRIISDEEFASIVLAGLTKTLAPDNAIRLELDAS
HVDRETMELIAASEAEQERRIVQILVNRKIREASFRRQVIDAYENTCAVT
RLKIVNGGGKAEAQAAHIWPVAGGGPDVIQNGIALSATAHWLFDRHLISL
TDDRGLLVAHNRVPSELQSLFQNQLQRIHLPKNQALWP
back to top

mRNA from alignment at P-wetherbeei_contig20919:1..864-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20919.1.1 ID=mRNA_P-wetherbeei_contig20919.1.1|Name=mRNA_P-wetherbeei_contig20919.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=864bp|location=Sequence derived from alignment at P-wetherbeei_contig20919:1..864- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGGTCATTTTCGATACGAGGGCCGAATCGCAATACGACGACGATAT CGTCCAGAGGTACCATTTCCCGAACCGATACTTGCCTGCCGCTCGGCAGG CAGTCGGCGACTGGATTGTCTACCGGGAGCCGCGTCGTGCCGGCGGTAGG TCAGGCTATGTCGCTGTCGCTAGGCTATTGCTTGTCGAACCCGACTCCGA GACTCCTGGCTTTTCATACGCACGAATTGCCGATTTCTTGCCTTTCGATG CCGTAGTGCCGCTTCGACACGGGGCAGGATTTTACGAACGACAGCTCGGA TTTGTTCCAAAGCCGTCTTTGATCGGAGCAAGTCTCCGGGGGAAGTCGAT ACGGATCATCTCGGACGAGGAGTTCGCAAGTATTGTTCTAGCAGGTTTGA CCAAGACGTTGGCGCCGGACAATGCGATCCGGTTGGAGCTCGACGCGTCG CATGTCGACCGCGAGACAATGGAGCTGATTGCTGCGTCAGAAGCGGAGCA AGAGAGGCGCATTGTCCAGATACTCGTAAACCGGAAAATTCGAGAGGCAA GTTTCCGAAGGCAGGTCATTGACGCGTATGAAAATACTTGCGCCGTGACA CGACTGAAGATCGTCAATGGAGGGGGCAAAGCTGAAGCTCAAGCGGCGCA CATTTGGCCTGTGGCCGGTGGTGGTCCGGATGTCATTCAAAATGGGATTG CCTTGTCAGCGACAGCTCATTGGCTGTTTGATCGACACCTGATCTCGCTA ACCGATGACCGCGGATTGCTCGTTGCGCACAATAGAGTGCCAAGCGAACT GCAGTCGCTATTCCAGAATCAGTTGCAACGAATCCATCTGCCGAAGAATC AAGCTCTTTGGCCG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig20919:1..864-

>mRNA_P-wetherbeei_contig20919.1.1 ID=mRNA_P-wetherbeei_contig20919.1.1|Name=mRNA_P-wetherbeei_contig20919.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=864bp|location=Sequence derived from alignment at P-wetherbeei_contig20919:1..864- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGGTCATTTTCGATACGAGGGCCGAATCGCAATACGACGACGATAT
CGTCCAGAGGTACCATTTCCCGAACCGATACTTGCCTGCCGCTCGGCAGG
CAGTCGGCGACTGGATTGTCTACCGGGAGCCGCGTCGTGCCGGCGGTAGG
TCAGGCTATGTCGCTGTCGCTAGGCTATTGCTTGTCGAACCCGACTCCGA
GACTCCTGGCTTTTCATACGCACGAATTGCCGATTTCTTGCCTTTCGATG
CCGTAGTGCCGCTTCGACACGGGGCAGGATTTTACGAACGACAGCTCGGA
TTTGTTCCAAAGCCGTCTTTGATCGGAGCAAGTCTCCGGGGGAAGTCGAT
ACGGATCATCTCGGACGAGGAGTTCGCAAGTATTGTTCTAGCAGGTTTGA
CCAAGACGTTGGCGCCGGACAATGCGATCCGGTTGGAGCTCGACGCGTCG
CATGTCGACCGCGAGACAATGGAGCTGATTGCTGCGTCAGAAGCGGAGCA
AGAGAGGCGCATTGTCCAGATACTCGTAAACCGGAAAATTCGAGAGGCAA
GTTTCCGAAGGCAGGTCATTGACGCGTATGAAAATACTTGCGCCGTGACA
CGACTGAAGATCGTCAATGGAGGGGGCAAAGCTGAAGCTCAAGCGGCGCA
CATTTGGCCTGTGGCCGGTGGTGGTCCGGATGTCATTCAAAATGGGATTG
CCTTGTCAGCGACAGCTCATTGGCTGTTTGATCGACACCTGATCTCGCTA
ACCGATGACCGCGGATTGCTCGTTGCGCACAATAGAGTGCCAAGCGAACT
GCAGTCGCTATTCCAGAATCAGTTGCAACGAATCCATCTGCCGAAGAATC
AAGCTCTTTGGCCG
back to top