mRNA_P-wetherbeei_contig20903.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20903.1.1
Unique NamemRNA_P-wetherbeei_contig20903.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20903.1.1 vs. uniprot
Match: A0A2E5MAB2_9GAMM (LuxA n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E5MAB2_9GAMM)

HSP 1 Score: 311 bits (798), Expect = 6.730e-104
Identity = 142/161 (88.20%), Postives = 151/161 (93.79%), Query Frame = 1
Query:    1 VKFGIFYELQLPKPWTRDDEYRLLNHALDQVELADGLGYDYAWEVEHHFLEEYSHSSAPEVFLAAASQRTKNIRLGHGIVQLPTNHPARVAERVSTLDLLSHGRVELGVGEGSSVTELHPFDRRFRDKRAVWEDAMRCLLPMFWEEGWAYHGAHFDFPLRN 483
            +KFGIFYELQLPKPW  D EY+L N ALDQ+ELAD LG+DYAWEVEHHFLEEYSHSSAPEVFLAAASQRTKNIRLGHGIVQLPTNHPARVAERVSTLDLLSHGRVE G+GEGSSVTELHPFDRRFRDKRAVWEDA++ +LPMFWEEGW YHG +FDFPLRN
Sbjct:    1 MKFGIFYELQLPKPWQEDSEYKLFNEALDQIELADRLGFDYAWEVEHHFLEEYSHSSAPEVFLAAASQRTKNIRLGHGIVQLPTNHPARVAERVSTLDLLSHGRVEFGIGEGSSVTELHPFDRRFRDKRAVWEDAVKAILPMFWEEGWEYHGEYFDFPLRN 161          
BLAST of mRNA_P-wetherbeei_contig20903.1.1 vs. uniprot
Match: A0A3N5JYG3_9ACTN (LLM class flavin-dependent oxidoreductase (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A3N5JYG3_9ACTN)

HSP 1 Score: 295 bits (756), Expect = 9.640e-101
Identity = 136/161 (84.47%), Postives = 148/161 (91.93%), Query Frame = 1
Query:    1 VKFGIFYELQLPKPWTRDDEYRLLNHALDQVELADGLGYDYAWEVEHHFLEEYSHSSAPEVFLAAASQRTKNIRLGHGIVQLPTNHPARVAERVSTLDLLSHGRVELGVGEGSSVTELHPFDRRFRDKRAVWEDAMRCLLPMFWEEGWAYHGAHFDFPLRN 483
            +KFGIFYELQLP+PW  D EY L+ +ALDQ+ELAD LG+DYAWEVEHHFLEEYSHSSAPEVFLAAASQRTKNIRLGHGIVQL TNHPARVAERVSTLDL+S GRVE+G+GE SSVTELHPFDRRFRDKR+VWEDA+RC+LPMF EEGW YHG  FDFPLRN
Sbjct:    1 MKFGIFYELQLPRPWEADSEYELVQNALDQIELADRLGFDYAWEVEHHFLEEYSHSSAPEVFLAAASQRTKNIRLGHGIVQLTTNHPARVAERVSTLDLVSRGRVEMGIGEASSVTELHPFDRRFRDKRSVWEDAVRCVLPMFTEEGWEYHGEWFDFPLRN 161          
BLAST of mRNA_P-wetherbeei_contig20903.1.1 vs. uniprot
Match: A0A7V9SZ73_9ACTN (LLM class flavin-dependent oxidoreductase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9SZ73_9ACTN)

HSP 1 Score: 296 bits (759), Expect = 5.130e-98
Identity = 138/161 (85.71%), Postives = 147/161 (91.30%), Query Frame = 1
Query:    1 VKFGIFYELQLPKPWTRDDEYRLLNHALDQVELADGLGYDYAWEVEHHFLEEYSHSSAPEVFLAAASQRTKNIRLGHGIVQLPTNHPARVAERVSTLDLLSHGRVELGVGEGSSVTELHPFDRRFRDKRAVWEDAMRCLLPMFWEEGWAYHGAHFDFPLRN 483
            +KFGIFYELQLPKPW R+ E+ L  +ALDQ+ELAD LGYDYAWEVEHHFLEEYSHSSAPEVFL AASQRT  IRLGHGIVQLPTNHPARVAERVSTLDLLS GRVELG+GEGSSVTELHPFDRRFRDKRAVWEDA++ LLPMF EEGW YHG +FDFPLRN
Sbjct:    1 MKFGIFYELQLPKPWERNSEFELFTNALDQIELADRLGYDYAWEVEHHFLEEYSHSSAPEVFLGAASQRTSRIRLGHGIVQLPTNHPARVAERVSTLDLLSDGRVELGIGEGSSVTELHPFDRRFRDKRAVWEDAVKALLPMFSEEGWEYHGEYFDFPLRN 161          
BLAST of mRNA_P-wetherbeei_contig20903.1.1 vs. uniprot
Match: A0A6N7FPV4_9ACTN (LLM class flavin-dependent oxidoreductase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6N7FPV4_9ACTN)

HSP 1 Score: 293 bits (751), Expect = 3.840e-97
Identity = 136/161 (84.47%), Postives = 146/161 (90.68%), Query Frame = 1
Query:    1 VKFGIFYELQLPKPWTRDDEYRLLNHALDQVELADGLGYDYAWEVEHHFLEEYSHSSAPEVFLAAASQRTKNIRLGHGIVQLPTNHPARVAERVSTLDLLSHGRVELGVGEGSSVTELHPFDRRFRDKRAVWEDAMRCLLPMFWEEGWAYHGAHFDFPLRN 483
            +KFGIFYELQLP+PW  D EY L  +AL+Q+ELAD LG+DYAWEVEHHFLEEYSHSSAPEVFLAAASQRTKNIRLGHGIVQL TNHPARV ERVSTLDL+S GRVELG+GEGSSVTELHPFDRRFRDKRAVWEDA++  LPMFWEEGW YHG  FDFPLRN
Sbjct:    1 MKFGIFYELQLPRPWGPDSEYELFTNALEQIELADKLGFDYAWEVEHHFLEEYSHSSAPEVFLAAASQRTKNIRLGHGIVQLTTNHPARVVERVSTLDLVSGGRVELGLGEGSSVTELHPFDRRFRDKRAVWEDAVKATLPMFWEEGWEYHGEWFDFPLRN 161          
BLAST of mRNA_P-wetherbeei_contig20903.1.1 vs. uniprot
Match: A0A836X276_9PROT (LLM class flavin-dependent oxidoreductase n=1 Tax=Sneathiellales bacterium TaxID=2528251 RepID=A0A836X276_9PROT)

HSP 1 Score: 294 bits (753), Expect = 5.650e-97
Identity = 134/161 (83.23%), Postives = 149/161 (92.55%), Query Frame = 1
Query:    1 VKFGIFYELQLPKPWTRDDEYRLLNHALDQVELADGLGYDYAWEVEHHFLEEYSHSSAPEVFLAAASQRTKNIRLGHGIVQLPTNHPARVAERVSTLDLLSHGRVELGVGEGSSVTELHPFDRRFRDKRAVWEDAMRCLLPMFWEEGWAYHGAHFDFPLRN 483
            +KFGIFYE QLPKPW   DE+RL+ ++LDQ+ELAD LGYDYAWEVEHHFLEEYSHSSAPEVFLAAASQRTKNIRLGHGIVQL TNHPARVAERV+TLDL+S GRVELG+GEGSSVTELHPFDRR+RDKR++WEDA++ LLPMF+ EGW YHG HFDFPLRN
Sbjct:    1 MKFGIFYEHQLPKPWNDGDEHRLMKNSLDQIELADKLGYDYAWEVEHHFLEEYSHSSAPEVFLAAASQRTKNIRLGHGIVQLTTNHPARVAERVATLDLVSDGRVELGIGEGSSVTELHPFDRRYRDKRSIWEDAVKALLPMFYNEGWEYHGEHFDFPLRN 161          
BLAST of mRNA_P-wetherbeei_contig20903.1.1 vs. uniprot
Match: A0A6P2BEM9_9GAMM (LLM class flavin-dependent oxidoreductase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6P2BEM9_9GAMM)

HSP 1 Score: 284 bits (726), Expect = 1.630e-95
Identity = 131/160 (81.88%), Postives = 142/160 (88.75%), Query Frame = 1
Query:    1 VKFGIFYELQLPKPWTRDDEYRLLNHALDQVELADGLGYDYAWEVEHHFLEEYSHSSAPEVFLAAASQRTKNIRLGHGIVQLPTNHPARVAERVSTLDLLSHGRVELGVGEGSSVTELHPFDRRFRDKRAVWEDAMRCLLPMFWEEGWAYHGAHFDFPLR 480
            +KFG+FYE QLP+PW  D EYRL  ++LDQ+ELAD LGYDYAWEVEHHFLEEYSHSSAPEVFLAAASQRT+NIRLGHGIVQL TNHPARVAERV+TLDLLSHGRVELG+GEGSSVTELHPF+ RFRDKR VWEDA+RC LPMFW  GW Y G  F FPLR
Sbjct:    1 MKFGVFYEHQLPRPWDDDAEYRLFQNSLDQIELADRLGYDYAWEVEHHFLEEYSHSSAPEVFLAAASQRTRNIRLGHGIVQLTTNHPARVAERVATLDLLSHGRVELGLGEGSSVTELHPFNLRFRDKRLVWEDAVRCTLPMFWNHGWEYDGPFFKFPLR 160          
BLAST of mRNA_P-wetherbeei_contig20903.1.1 vs. uniprot
Match: A0A352KBA0_9PROT (LLM class flavin-dependent oxidoreductase n=5 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KBA0_9PROT)

HSP 1 Score: 289 bits (739), Expect = 5.650e-95
Identity = 132/161 (81.99%), Postives = 147/161 (91.30%), Query Frame = 1
Query:    1 VKFGIFYELQLPKPWTRDDEYRLLNHALDQVELADGLGYDYAWEVEHHFLEEYSHSSAPEVFLAAASQRTKNIRLGHGIVQLPTNHPARVAERVSTLDLLSHGRVELGVGEGSSVTELHPFDRRFRDKRAVWEDAMRCLLPMFWEEGWAYHGAHFDFPLRN 483
            +KFGIFYE QLPKPW  DDEY LL ++L ++ELAD LGYDYAWEVEHHFLEEYSHS+APEVFL+AASQRT+NIRLGHGIVQL TNHPARVAERVSTLDL+S GRVELG+GEGSSVTELHPF+RRFRDKR VWEDA++ +LPMFW EGW YHG +FDFPLRN
Sbjct:    1 MKFGIFYEHQLPKPWAPDDEYNLLKNSLAEIELADKLGYDYAWEVEHHFLEEYSHSAAPEVFLSAASQRTRNIRLGHGIVQLTTNHPARVAERVSTLDLVSDGRVELGLGEGSSVTELHPFERRFRDKRDVWEDAVQAVLPMFWNEGWEYHGKYFDFPLRN 161          
BLAST of mRNA_P-wetherbeei_contig20903.1.1 vs. uniprot
Match: A0A6N8Y252_9BACT (LLM class flavin-dependent oxidoreductase n=5 Tax=Holophagales bacterium TaxID=2478486 RepID=A0A6N8Y252_9BACT)

HSP 1 Score: 287 bits (734), Expect = 4.250e-94
Identity = 133/161 (82.61%), Postives = 146/161 (90.68%), Query Frame = 1
Query:    1 VKFGIFYELQLPKPWTRDDEYRLLNHALDQVELADGLGYDYAWEVEHHFLEEYSHSSAPEVFLAAASQRTKNIRLGHGIVQLPTNHPARVAERVSTLDLLSHGRVELGVGEGSSVTELHPFDRRFRDKRAVWEDAMRCLLPMFWEEGWAYHGAHFDFPLRN 483
            +KFGIFYE QLPKPW  D E+RLL ++L+Q+ELAD LGYDYAWEVEHHFLEEYSHSSAPEVFLAAASQRTKNIRLGHGIVQL TNHPARVAERVSTLDL+S+GRVELG+GEGSSVTELHPF R FRDKR VWE+A++  LPMFW EGW YHG +FDFPLRN
Sbjct:    1 MKFGIFYEHQLPKPWGPDSEHRLLQNSLEQIELADRLGYDYAWEVEHHFLEEYSHSSAPEVFLAAASQRTKNIRLGHGIVQLTTNHPARVAERVSTLDLVSNGRVELGLGEGSSVTELHPFGRSFRDKRIVWEEAVQACLPMFWNEGWEYHGHYFDFPLRN 161          
BLAST of mRNA_P-wetherbeei_contig20903.1.1 vs. uniprot
Match: A0A7C7YLE0_9DELT (LLM class flavin-dependent oxidoreductase n=2 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7C7YLE0_9DELT)

HSP 1 Score: 285 bits (730), Expect = 1.560e-93
Identity = 131/161 (81.37%), Postives = 143/161 (88.82%), Query Frame = 1
Query:    1 VKFGIFYELQLPKPWTRDDEYRLLNHALDQVELADGLGYDYAWEVEHHFLEEYSHSSAPEVFLAAASQRTKNIRLGHGIVQLPTNHPARVAERVSTLDLLSHGRVELGVGEGSSVTELHPFDRRFRDKRAVWEDAMRCLLPMFWEEGWAYHGAHFDFPLRN 483
            +KFGIFYE QLP+PWT   EY LL ++LD+VELAD LGYDYAWEVEHHFLEEYSHSSAPEVFLAAASQRTK IRL HGI+QL TNHPARVAERVSTLDL+SHGRVE G+GEGSS+TELHPFDRRFRDKRAVWEDA+R ++PMF  E W YHG  FDFPLRN
Sbjct:    1 MKFGIFYEHQLPRPWTERAEYELLQNSLDEVELADRLGYDYAWEVEHHFLEEYSHSSAPEVFLAAASQRTKQIRLAHGIIQLTTNHPARVAERVSTLDLISHGRVEFGIGEGSSITELHPFDRRFRDKRAVWEDAVRAIIPMFTSESWEYHGEFFDFPLRN 161          
BLAST of mRNA_P-wetherbeei_contig20903.1.1 vs. uniprot
Match: A0A523FRZ7_9PROT (LLM class flavin-dependent oxidoreductase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A523FRZ7_9PROT)

HSP 1 Score: 283 bits (724), Expect = 1.150e-92
Identity = 127/161 (78.88%), Postives = 145/161 (90.06%), Query Frame = 1
Query:    1 VKFGIFYELQLPKPWTRDDEYRLLNHALDQVELADGLGYDYAWEVEHHFLEEYSHSSAPEVFLAAASQRTKNIRLGHGIVQLPTNHPARVAERVSTLDLLSHGRVELGVGEGSSVTELHPFDRRFRDKRAVWEDAMRCLLPMFWEEGWAYHGAHFDFPLRN 483
            +KFG+FYELQLP+PW +D E++L  +ALDQ+ELAD LGYDYAW+VEHHF+EEYSHSSAPEVFL AASQRTKNIRLGHGI+QLPTNHP+RVAERVSTLDLLS GRVELG+GEGSSVTELHPF R+FR+KRAV+EDA+R +LP FWEE W YHG  FD P RN
Sbjct:    1 MKFGVFYELQLPRPWKQDSEHKLFKNALDQIELADQLGYDYAWQVEHHFMEEYSHSSAPEVFLGAASQRTKNIRLGHGIIQLPTNHPSRVAERVSTLDLLSDGRVELGIGEGSSVTELHPFGRKFRNKRAVFEDAVRAILPQFWEESWEYHGEFFDLPARN 161          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20903.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E5MAB2_9GAMM6.730e-10488.20LuxA n=1 Tax=Gammaproteobacteria bacterium TaxID=1... [more]
A0A3N5JYG3_9ACTN9.640e-10184.47LLM class flavin-dependent oxidoreductase (Fragmen... [more]
A0A7V9SZ73_9ACTN5.130e-9885.71LLM class flavin-dependent oxidoreductase n=1 Tax=... [more]
A0A6N7FPV4_9ACTN3.840e-9784.47LLM class flavin-dependent oxidoreductase n=1 Tax=... [more]
A0A836X276_9PROT5.650e-9783.23LLM class flavin-dependent oxidoreductase n=1 Tax=... [more]
A0A6P2BEM9_9GAMM1.630e-9581.88LLM class flavin-dependent oxidoreductase (Fragmen... [more]
A0A352KBA0_9PROT5.650e-9581.99LLM class flavin-dependent oxidoreductase n=5 Tax=... [more]
A0A6N8Y252_9BACT4.250e-9482.61LLM class flavin-dependent oxidoreductase n=5 Tax=... [more]
A0A7C7YLE0_9DELT1.560e-9381.37LLM class flavin-dependent oxidoreductase n=2 Tax=... [more]
A0A523FRZ7_9PROT1.150e-9278.88LLM class flavin-dependent oxidoreductase n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20903contigP-wetherbeei_contig20903:2..484 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1429916.X566_18470
Preferred nameMA20_03405
PFAMsBac_luciferase
Model size483
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.12e-79
EggNOG OGsCOG2141@1|root,COG2141@2|Bacteria,1MX64@1224|Proteobacteria,2TV8M@28211|Alphaproteobacteria,3JTR2@41294|Bradyrhizobiaceae
DescriptionLuciferase-like monooxygenase
Cds size483
COG categoryC
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186211.6598437-CDS-P-wetherbeei_contig20903:1..4841683186211.6598437-CDS-P-wetherbeei_contig20903:1..484Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20903 2..484 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20903.1.1prot_P-wetherbeei_contig20903.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20903 2..484 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20903.1.1

>prot_P-wetherbeei_contig20903.1.1 ID=prot_P-wetherbeei_contig20903.1.1|Name=mRNA_P-wetherbeei_contig20903.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=161bp
VKFGIFYELQLPKPWTRDDEYRLLNHALDQVELADGLGYDYAWEVEHHFL
EEYSHSSAPEVFLAAASQRTKNIRLGHGIVQLPTNHPARVAERVSTLDLL
SHGRVELGVGEGSSVTELHPFDRRFRDKRAVWEDAMRCLLPMFWEEGWAY
HGAHFDFPLRN
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mRNA from alignment at P-wetherbeei_contig20903:2..484-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20903.1.1 ID=mRNA_P-wetherbeei_contig20903.1.1|Name=mRNA_P-wetherbeei_contig20903.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=483bp|location=Sequence derived from alignment at P-wetherbeei_contig20903:2..484- (Phaeothamnion wetherbeei SAG_119_79)
GTGAAGTTCGGCATCTTCTACGAGCTGCAGTTGCCCAAGCCCTGGACTCG CGATGACGAGTACCGGTTGCTCAACCACGCACTCGATCAGGTCGAGCTGG CCGACGGGCTCGGCTACGACTACGCGTGGGAGGTGGAGCACCACTTCCTC GAGGAGTACAGCCACTCCTCGGCACCGGAGGTCTTCCTCGCCGCAGCGAG CCAGCGCACGAAGAACATCCGCCTCGGCCACGGCATCGTGCAGCTGCCGA CGAACCACCCGGCACGAGTCGCCGAACGGGTGAGCACGCTCGACTTGTTG AGCCACGGTCGCGTCGAGCTCGGCGTCGGCGAGGGCAGCAGCGTCACCGA GCTGCACCCGTTCGACCGCCGGTTCCGCGACAAGCGCGCCGTGTGGGAGG ACGCCATGCGCTGCCTGCTGCCGATGTTCTGGGAGGAGGGCTGGGCGTAC CACGGCGCGCACTTCGACTTCCCGCTGCGCAAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20903:2..484-

>mRNA_P-wetherbeei_contig20903.1.1 ID=mRNA_P-wetherbeei_contig20903.1.1|Name=mRNA_P-wetherbeei_contig20903.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=483bp|location=Sequence derived from alignment at P-wetherbeei_contig20903:2..484- (Phaeothamnion wetherbeei SAG_119_79)
GTGAAGTTCGGCATCTTCTACGAGCTGCAGTTGCCCAAGCCCTGGACTCG
CGATGACGAGTACCGGTTGCTCAACCACGCACTCGATCAGGTCGAGCTGG
CCGACGGGCTCGGCTACGACTACGCGTGGGAGGTGGAGCACCACTTCCTC
GAGGAGTACAGCCACTCCTCGGCACCGGAGGTCTTCCTCGCCGCAGCGAG
CCAGCGCACGAAGAACATCCGCCTCGGCCACGGCATCGTGCAGCTGCCGA
CGAACCACCCGGCACGAGTCGCCGAACGGGTGAGCACGCTCGACTTGTTG
AGCCACGGTCGCGTCGAGCTCGGCGTCGGCGAGGGCAGCAGCGTCACCGA
GCTGCACCCGTTCGACCGCCGGTTCCGCGACAAGCGCGCCGTGTGGGAGG
ACGCCATGCGCTGCCTGCTGCCGATGTTCTGGGAGGAGGGCTGGGCGTAC
CACGGCGCGCACTTCGACTTCCCGCTGCGCAAC
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