mRNA_P-wetherbeei_contig209.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig209.1.1 vs. uniprot
Match: A0A835YNI4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNI4_9STRA) HSP 1 Score: 250 bits (638), Expect = 3.720e-69 Identity = 175/485 (36.08%), Postives = 245/485 (50.52%), Query Frame = 3
Query: 249 DPDKRRIVTSRPKE-NPLANAIRNFEGQFEFLSTMHRSSVLLPGDDEPYPTIEHAFQASKTEDPGLRAAVRAARTGIDAKKTTRTAPVTDAWRARSEALMELLVRDKFLRHPKQRDRLIATGDRPIVFENTHDDRIWGVCRGAGENKLGKLLEQVRADVARGGGEDALAWCRARFALPRPEDAALGLVALKRGAPVEALDFTAKPIIRVGKHPDNDVVLEHPTASRWHALIVLDLSGSNGGDGCIXXXXXXXXXXGGGSRTGTPYVVCLGAANGTFVGGKRLEAFAPRALPVAPXXXXXXXXXXXXXXXXXGRTGCGADVSAAVAXXXXXXXXXXXAGVAFGVSARRWVVMAAETTRRDAQRAALLREMAGGITAEGGVVTDAAGGGTPPEDATVYVSGLAKEADEVAVAEIFEDCGEIHSVRVLKEAGGGLS----------RGIAFVSFRRPAGAVKALMMD-GEIVGDGANPIKVRRSKAKP 1667
+P + + S+PK +PL AI + ++E+LS +HR+ V LPGD+EPYPT+EHAFQASKTED LRA +RAA T I+AKK R V+DAWR+RSEA+ME LVRDKF RH K R++L+ TG + + + N H+D++WGVC G GENKLG+ FAL P+ +A + K GA ++ ++++GK NDV++EHP+ SR HAL+++ +G G GC+ +V LGA NGTFVGG+RL F PR + CGA AA A + FG+S R + V + R+ Q+AAL +A A G GG TVYV L+ + E + F CGEI ++ + + G RG AF++F G +AL MD E+ G +KV+R++A P
Sbjct: 3 EPGRYYYMPSKPKAVDPLKTAIHIGKEEYEYLSNLHRAKVYLPGDEEPYPTVEHAFQASKTEDMQLRAEIRAAPTAIEAKKAARKIAVSDAWRSRSEAIMEALVRDKFRRHDKYREQLLGTGAQLLAYVNEHNDKLWGVCDGKGENKLGE------------------------FALV-PQCSAAPMNISKGGAVLDTPVIEGTALVQLGKVEGNDVLMEHPSTSRRHALLLVPRAGRGGQGGCL--------------------LVDLGAPNGTFVGGERLAPFVPRRV-------------------------CGALGEAA-------------ATMTFGLSRREYRVASLRRDLREMQKAALYATVAAPAAAPGTAAAATTGGPN-----TVYVGNLSYDVTEAQLRAAFAPCGEIAALSLPRARDGDAGXXXXXXXXXHRGFAFITFATLTGGARALAMDRDELAG---REMKVKRAEAPP 396
BLAST of mRNA_P-wetherbeei_contig209.1.1 vs. uniprot
Match: D8LBP7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBP7_ECTSI) HSP 1 Score: 249 bits (637), Expect = 2.080e-67 Identity = 138/292 (47.26%), Postives = 175/292 (59.93%), Query Frame = 3
Query: 240 MTMDPDKRRIVTSRPKENPLANAIRNFEGQFEFLSTMHRSSVLLPGDDEPYPTIEHAFQASKTEDPGLRAAVRAARTGIDAKKTTRTAPVTDAWRARSEALMELLVRDKFLRHPKQRDRLIATGDRPIVFENTHDDRIWGVCRGAGENKLGKLLEQVRADVARGGGEDALAWCRARFALPRPEDAALGLVALKRGAPVEALDFTAKPIIRVGKHPDNDVVLEHPTASRWHALIVLDLSGSNGGDGCIXXXXXXXXXXGGGSRTGTPYVVCLGAANGTFVGGKRLEAFAPRAL 1115
M++DPD IV S+PK + A+AIR FEG FE LS ++ V L GD EPYP++EHA QASKT+D L+AA+R A+ I+AKK R A WR SE + E LVRDKF R+ K R+ L+ TG +V+ NTHDDR WGVC G GENKLGKLLE+VRAD G+D AWC RF L P D +G K G V F KP+IR+GK DN+VV+ HP+ SR HAL+V+D R ++V LGA+NG+FV G+RL + P +
Sbjct: 1 MSVDPDTVYIVHSKPKHDSHADAIRQFEGDFECLSNTYKCPVSLRGDPEPYPSVEHALQASKTDDFELKAAIRQAKNAIEAKKIARVAKPKPDWRGSSEKIAEALVRDKFRRNAKAREVLVGTGRVKLVYTNTHDDRFWGVCTGKGENKLGKLLERVRADAL--AGKDTEAWCATRFQLALPLDVMVGFAVSKAGKIVADPSFEGKPVIRMGKLADNEVVMAHPSVSRSHALLVVD-------------------------RCFGAFLVDLGASNGSFVDGRRLSPYVPEPI 265
BLAST of mRNA_P-wetherbeei_contig209.1.1 vs. uniprot
Match: W7TWY4_9STRA (Rna recognition motif-containing protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TWY4_9STRA) HSP 1 Score: 175 bits (444), Expect = 1.620e-42 Identity = 111/314 (35.35%), Postives = 165/314 (52.55%), Query Frame = 3
Query: 222 AIMVKSMTMDPDKRRIV-----TSRPKENPLANAIRNFEGQFEFLSTMHRSSVLLPGDD-------EPYPTIEHAFQASKTEDPGLRAAVRAARTGIDAKKTTRTAPVTD--AWRARSEALMELLVRDKFLRHPKQRDRLIATGDRPIVFENTHDDRIWGVCRGAGENKLGKLLEQVRADVARGGGEDALAWCRARFALPRPEDAALGLVALKRGAPVEALDFTA--KPIIRVGKHPDNDVVLEHPTASRWHALIVLDLSGSNGGDGCIXXXXXXXXXXGGGSRTGTPYVVCLGAANGTFVGGKRLEAFAPRAL 1115
A V DPDK+ V ++ + + I F G+++FLST+ +S V+LPG+ + YPT+EHA QASK+ DP R ++ +++ ++AK+ AP D AW+ +S +ME L+RDKF RH R +L+ TG + +V+EN H+D+ WG C+G G N LG+LLE+VRAD G L W + F L + + G P+ D T K I+ GK +NDV + HP+ SR+HA++V+ S+ P +V L AANG+F+ +RLE F AL
Sbjct: 2 ASAVDRRVFDPDKKASVRVLDDSAATARRLVESRITAFTGEYDFLSTLSKSRVVLPGEGVMEGEGFQAYPTVEHALQASKSSDPTYRQSILSSKDALEAKRRGAKAPNVDKQAWKLKSLVVMEALLRDKFRRHKGLRQQLMNTGTKQLVYENEHNDQFWGTCKGKGHNHLGQLLERVRADEKEGL-LGILLWAKQVFNATSDSKVRLDVSVTREGHPLPEADLTLERKAIVTFGKLAENDVPVAHPSTSRFHAMVVV-------------------------SQPYGPLLVDLEAANGSFLDERRLEPFKGAAL 289
BLAST of mRNA_P-wetherbeei_contig209.1.1 vs. uniprot
Match: A0A4D9DEI1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DEI1_9STRA) HSP 1 Score: 172 bits (437), Expect = 1.160e-41 Identity = 109/314 (34.71%), Postives = 164/314 (52.23%), Query Frame = 3
Query: 222 AIMVKSMTMDPDKRRIV-----TSRPKENPLANAIRNFEGQFEFLSTMHRSSVLLPGDD-------EPYPTIEHAFQASKTEDPGLRAAVRAARTGIDAKKTTRTAPVTD--AWRARSEALMELLVRDKFLRHPKQRDRLIATGDRPIVFENTHDDRIWGVCRGAGENKLGKLLEQVRADVARGGGEDALAWCRARFALPRPEDAALGLVALKRGAPVEALDFTA--KPIIRVGKHPDNDVVLEHPTASRWHALIVLDLSGSNGGDGCIXXXXXXXXXXGGGSRTGTPYVVCLGAANGTFVGGKRLEAFAPRAL 1115
A V DPDK+ V ++ + + I F G+++FL T+ +S V++PG+ + YPT+EHA QASK+ DP R ++ +++ ++AK+ AP D AW+ +S +ME L+RDKF RH R +L+ TG + +V+EN H+D+ WG C+G G N LG+LLE+VRAD G L W + F L + + G P+ D T K I+ GK +NDV + HP+ SR+HA++V+ S+ P +V L AANG+F+ +RLE F AL
Sbjct: 2 ASAVDRRVFDPDKKASVRVLDDSAATARRLVESRITAFTGEYDFLCTLSKSRVVIPGEGVMEGEGFQAYPTVEHALQASKSSDPTYRQSILSSKDALEAKRRGAKAPNVDKQAWKLKSLVVMEALLRDKFRRHKGLRQQLMNTGTKQLVYENEHNDQFWGTCKGKGHNHLGQLLERVRADEKEGL-LGILLWAKQVFNATSDSKVRLDVSVTREGHPMPEADLTLERKAIVTFGKLAENDVPVAHPSTSRFHAMVVV-------------------------SQPYGPLLVDLEAANGSFLDERRLEPFKGAAL 289
BLAST of mRNA_P-wetherbeei_contig209.1.1 vs. uniprot
Match: K8YN62_NANGC (Rna recognition motif-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YN62_NANGC) HSP 1 Score: 139 bits (350), Expect = 1.830e-33 Identity = 81/207 (39.13%), Postives = 119/207 (57.49%), Query Frame = 3
Query: 153 EFFEAARLSSFRALASLRFSSVFAIMVKSMTMDPDKRRIV-----TSRPKENPLANAIRNFEGQFEFLSTMHRSSVLLPGDD-------EPYPTIEHAFQASKTEDPGLRAAVRAARTGIDAKKTTRTAPVTD--AWRARSEALMELLVRDKFLRHPKQRDRLIATGDRPIVFENTHDDRIWGVCRGAGENKLGKLLEQVRADVARG 731
E+F A L R LA A V DPDK+ V ++ + + I F G+++FLST+ +S V+LPG+ + YPT+EHA QASK+ DP R ++ +++ ++AK+ AP D AW+ +S +ME L+RDKF RH R +L+ TG + +V+EN H+D+ WG C+G G N LG+LLE+VRAD G
Sbjct: 7 EYFATA-LPDLRRLA-------MASAVDRRVFDPDKKASVRVLDDSAATARRLVESRITAFTGEYDFLSTLSKSRVVLPGEGVMEGEGFQAYPTVEHALQASKSSDPTYRQSILSSKDALEAKRRGAKAPNVDKQAWKLKSLVVMEALLRDKFRRHKGLRQQLMNTGTKQLVYENEHNDQFWGTCKGKGHNHLGQLLERVRADEKEG 205
BLAST of mRNA_P-wetherbeei_contig209.1.1 vs. uniprot
Match: A0A7S2QMZ6_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2QMZ6_9DINO) HSP 1 Score: 112 bits (280), Expect = 1.000e-22 Identity = 130/484 (26.86%), Postives = 195/484 (40.29%), Query Frame = 3
Query: 318 FEGQFEFLSTMHRSSVLLPGDDEPYPTIEHAFQASKTEDPGLRAAVRAARTGIDAKKTTRTAPVTDAWRARSEALMELLVRDKFLRHPKQRDRLIATGDRPIVFENTHDDRIWGVCRGAGENKLGKLLEQVRADVARGGGEDALAWCRARFALPRPEDAALGLVALKRGAPVEALDFTAKPI--------------------------IRVGKHPDNDVVLEHPTASRWHALIVLDLSGSNGGDGCIXXXXXXXXXXGGGSRTGTPYVVCLGAANGTFVGGKRLEAFAPRALPVAPXXXXXXXXXXXXXXXXXGRTGCGADVSAAVAXXXXXXXXXXXAGVAFGVSARRWVV---MAAETTRRDAQRAALLREMAGGITAEGGVVTDAAGGGTPPEDATVYVSGLAKEADEVAVAEIFEDCGEIHSVRVLKEAGGGL--SRGIAFVSFRRPAGAVKALMMDGEIVGDGANPIKVRRSKAKPHDD 1676
FEG F+FL+ H +V D + ++ HA A++ P + AA+ A T +A K D W R ME ++RDKF R R RL TGDR +V+EN DD WG CRG G+N+LG+LL ++R ++A +D L L L +E+ D PI ++GK P N VV HP+ SR HA+++ S SR+G ++ LG+ G VGG+++E + + P + G S R + V ++++ + + Q+ LLRE+ I A+ +AA E+ATV+V L EA++ + +F+DCG + VR GG +RG FV F A +A ++GE+ K RR K P D
Sbjct: 9 FEGPFDFLAPEHPCAV--GWDGRVFKSLRHALLAAQF--PTVAAAIAGAATVSEAAKEAEGEFEADDWDMRRLKAMERILRDKFRRSDDFRKRLKETGDRELVWEND-DDAFWGSCRGKGQNQLGRLLMEIRGNIA--------------------DDTELELYLLLN-CELESDDIKRPPIELHEQKLDANGKVEFSKVHRLQGSGTFKMGKFPSNAVVAAHPSVSREHAILLHTRSRVA-------------------SRSGGVAIMDLGSKAGLAVGGRKVE----HSWVMEPVKSGDE--------------------------------------IRLGTSTRTYTVRVNLSSQIEQLERQQRELLREVEA-IDADAANPVEAAKKAAK-EEATVFVGNLDYEAEKADMLGLFQDCGHVEDVRF---PGGETKATRGFCFVRFDSGMAARRACGLNGEM-------FKERRVKVTPATD 393
BLAST of mRNA_P-wetherbeei_contig209.1.1 vs. uniprot
Match: A0A7C1JH61_9CHLR (NADAR family protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C1JH61_9CHLR) HSP 1 Score: 104 bits (259), Expect = 2.460e-22 Identity = 59/146 (40.41%), Postives = 86/146 (58.90%), Query Frame = 3
Query: 309 IRNFEGQFEFLSTMHRSSVLLPGDDEPYPTIEHAFQASKTEDPGLRAAVRAARTGIDAKKTTRTAPVTDAWRARSEALMELLVRDKFLRHPKQRDRLIATGDRPIVFENTHDDRIWGV------CRGAGENKLGKLLEQVRADVAR 728
I +FEG++ FLS + + V+L D+ YPT+EHAFQA+KT+DP R AV A++T AK+ R + W A ME LV+ KF RH R +L+ATGD ++ NT +D WG G+N LG++L ++R ++ R
Sbjct: 4 ITHFEGEYWFLSNFYPAPVVL--DETEYPTVEHAFQAAKTDDPDERRAVLASKTPALAKRAGRAVTMRPDWNTARFATMESLVQQKFTRHADLRAKLLATGDAELIEGNTWNDTTWGAVWDGDNAAWIGKNYLGQMLMRIRDELRR 147
BLAST of mRNA_P-wetherbeei_contig209.1.1 vs. uniprot
Match: A0A8I1NH68_9ACTN (NADAR family protein n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A8I1NH68_9ACTN) HSP 1 Score: 102 bits (255), Expect = 1.220e-21 Identity = 59/142 (41.55%), Postives = 86/142 (60.56%), Query Frame = 3
Query: 300 ANAIRNFEGQFEFLSTMHRSSVLLPGDDEPYPTIEHAFQASKTEDPGLRAAVRAARTGIDAKKT-TRTAPVTDAWRARSEALMELLVRDKFLRHPKQRDRLIATGDRPIVFENTHDDRIWGVCRGAGENKLGKLLEQVRADV 722
A AI F G++ FLS ++V G + YPT+EHA+Q +K DP +R +R A+ AKK ++ P D R+E +M LV KF RH + D+L+ATG+ +V EN+ D WGVC G GEN+LG++L +VR ++
Sbjct: 19 APAISGFFGEYRFLSNFWPATVRFEG--QVYPTVEHAYQGAKCVDPTMREQIRLAKRPGKAKKLGSKVKPRADWDEVRAE-VMRHLVSQKFQRHSELGDQLLATGNAELVEENSWGDTFWGVCEGEGENRLGRILMEVRQEL 157
BLAST of mRNA_P-wetherbeei_contig209.1.1 vs. uniprot
Match: A0A016QKQ2_9DEIO (NADAR domain-containing protein n=2 Tax=Deinococcus TaxID=1298 RepID=A0A016QKQ2_9DEIO) HSP 1 Score: 101 bits (252), Expect = 1.920e-21 Identity = 58/138 (42.03%), Postives = 80/138 (57.97%), Query Frame = 3
Query: 309 IRNFEGQFEFLSTMHRSSVLLPGDDEPYPTIEHAFQASKTEDPGLRAAVRAARTGIDAKKTTRTAPVTDAWRARSEALMELLVRDKFLRHPKQRDRLIATGDRPIVFENTHDDRIWGVCRGAGENKLGKLLEQVRADV 722
IR F GQ+ FLS + + + G YPT+EHAFQA KTE+ RA + T +A++ + + W E +M ++R KF R P R+RL+ATGD +V +N DR WGV RG G N+LG LL QVR ++
Sbjct: 4 IRGFRGQYAFLSNFEPAVIRVRG--VRYPTVEHAFQACKTENLAERAVIAGLPTPAEARQAGQQVTLRPGWDDMKEEVMLAMLRVKF-RQPDLRERLLATGDAALVEDNAWRDRYWGVYRGQGLNRLGVLLMQVREEI 138
BLAST of mRNA_P-wetherbeei_contig209.1.1 vs. uniprot
Match: UPI0019B1FDD9 (NADAR family protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=UPI0019B1FDD9) HSP 1 Score: 98.6 bits (244), Expect = 2.490e-20 Identity = 58/147 (39.46%), Postives = 85/147 (57.82%), Query Frame = 3
Query: 297 LANAIRNFEGQFEFLSTMHRSSVLLPGDDEPYPTIEHAFQASKTEDPGLRAAVRAARTGIDAKKTTRTAPVTDAWRARSEALMELLVRDKFLRHPKQRDRLIATGDRPIVFENTHDDRIWGVC----RGAGENKLGKLLEQVRADVA 725
+ + I NF +++FLS + V L DD YP+IEHAFQA+KT++P R ++ A + AK+ R + D W +M L+R KF RH + L+ATGD ++ NT +DR WG R G+N LG+LL QVRA+++
Sbjct: 1 MPDIITNFHSEYDFLSNFYLCPVAL--DDIDYPSIEHAFQAAKTDNPDERYKLQIASSPGAAKRLGRRVNLRDDWETVKLNIMLDLLRQKFTRHAEIGQLLLATGDAELIEGNTWNDRFWGAVLKDERWIGQNHLGRLLMQVRAELS 145 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig209.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig209.1.1 >prot_P-wetherbeei_contig209.1.1 ID=prot_P-wetherbeei_contig209.1.1|Name=mRNA_P-wetherbeei_contig209.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=806bp MVKSMTMDPDKRRIVTSRPKENPLANAIRNFEGQFEFLSTMHRSSVLLPGback to top mRNA from alignment at P-wetherbeei_contig209:2222..6521- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig209.1.1 ID=mRNA_P-wetherbeei_contig209.1.1|Name=mRNA_P-wetherbeei_contig209.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4300bp|location=Sequence derived from alignment at P-wetherbeei_contig209:2222..6521- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig209:2222..6521- >mRNA_P-wetherbeei_contig209.1.1 ID=mRNA_P-wetherbeei_contig209.1.1|Name=mRNA_P-wetherbeei_contig209.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2418bp|location=Sequence derived from alignment at P-wetherbeei_contig209:2222..6521- (Phaeothamnion wetherbeei SAG_119_79)back to top |