mRNA_P-wetherbeei_contig20857.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20857.1.1 vs. uniprot
Match: A0A6L5FG13_9HYPH (MFS transporter n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FG13_9HYPH) HSP 1 Score: 307 bits (786), Expect = 2.160e-99 Identity = 159/265 (60.00%), Postives = 197/265 (74.34%), Query Frame = 1
Query: 22 PSRLFALCLAGIVLIGPLAVHLFLPVIPAVKAEFALTDATAQLTFSSGIFAMALSTLAYGTLSDRYGRRPVLLAGLGLFLAGCAIVATASTFGMLLTGRIVQAVGAGCGTALVRSIARDAYGQAQLVKAISYLTMFYTLGPMIAPMVGGLLIDAFGWRSAFVFALIFGAVISAGAGLVIYETHTGTRIPLDAVAVLRSYVDPFRNPRFASFVLQSGFSSGIFFTLTAAVSVIMKEQLGRSATEYGVWFLAFPVGFLIGNIVSSRL 816
P LFAL LA I LIGPLAVHLF+PVIPAVKA FA++DA AQLTFS +FAMA +TLAYG+L+DRYGRRPVLL+GL LFL G I A A T L+ GR+VQA+GAGCG LVR+IARDAYG +LVK ++YLTMFYT+GPMI+P +GG+L+D FGWRS F FAL+ G+VI+ A L +YET VL YV F +PRF +FVLQSGF S F T +A + +M E L R TE+G++FLAFP+G+ GN+++SR+
Sbjct: 61 PGPLFALALASIALIGPLAVHLFMPVIPAVKAAFAVSDAVAQLTFSIALFAMAFATLAYGSLADRYGRRPVLLSGLCLFLVGSVISAIADTAWALVLGRLVQAIGAGCGMTLVRTIARDAYGPDRLVKVLAYLTMFYTIGPMISPAIGGILVDTFGWRSVFGFALLLGSVIALAAYLAVYETRPRAETAQAGPGVLGGYVALFAHPRFTAFVLQSGFCSASFMTAASASATLMPEYLHRPPTEFGLYFLAFPLGYFGGNLIASRV 325
BLAST of mRNA_P-wetherbeei_contig20857.1.1 vs. uniprot
Match: A0A537NDK5_9PROT (Multidrug effflux MFS transporter n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NDK5_9PROT) HSP 1 Score: 281 bits (720), Expect = 4.100e-90 Identity = 152/264 (57.58%), Postives = 186/264 (70.45%), Query Frame = 1
Query: 25 SRLFALCLAGIVLIGPLAVHLFLPVIPAVKAEFALTDATAQLTFSSGIFAMALSTLAYGTLSDRYGRRPVLLAGLGLFLAGCAIVATASTFGMLLTGRIVQAVGAGCGTALVRSIARDAYGQAQLVKAISYLTMFYTLGPMIAPMVGGLLIDAFGWRSAFVFALIFGAVISAGAGLVIYETHTGTRIPLDAVAVLRSYVDPFRNPRFASFVLQSGFSSGIFFTLTAAVSVIMKEQLGRSATEYGVWFLAFPVGFLIGNIVSSRL 816
R FA L + LI PLAVHLFLPVIPAVK L D+ AQLTF+ +FAMA +TL YG+LSDRYGRRP+LL+GL LFL G AI A A T +L GR+VQAVGAGC LVR+IARDAY LV+AI+YLTMFYTLGPM+AP+VGG+LID GWRS F FALI G +I+ A L I ET L + +LR Y + F P+F +VLQSGF++ F T+ +A + +MKE L R ++E+G +FL FPVGF G VSSR+
Sbjct: 9 GRGFAFALGLVALITPLAVHLFLPVIPAVKLALGLPDSAAQLTFTIALFAMAFATLVYGSLSDRYGRRPLLLSGLVLFLIGSAISAIAQTAPVLALGRLVQAVGAGCSMTLVRTIARDAYRAEHLVRAIAYLTMFYTLGPMLAPLVGGVLIDTLGWRSVFGFALIAGGIITVAAYLGIPETRPPRDPALAQIELLRGYAELFSRPQFVGYVLQSGFNTAAFMTMASASATLMKELLHRPSSEFGFYFLLFPVGFFFGTFVSSRV 272
BLAST of mRNA_P-wetherbeei_contig20857.1.1 vs. uniprot
Match: A0A521XMJ4_9PROT (Bcr/CflA family efflux transporter n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A521XMJ4_9PROT) HSP 1 Score: 281 bits (718), Expect = 8.210e-90 Identity = 142/266 (53.38%), Postives = 189/266 (71.05%), Query Frame = 1
Query: 22 PSRLFALCLAGIVLIGPLAVHLFLPVIPAVKAEFALTDATAQLTFSSGIFAMALSTLAYGTLSDRYGRRPVLLAGLGLFLAGCAIVATASTFGMLLTGRIVQAVGAGCGTALVRSIARDAYGQAQLVKAISYLTMFYTLGPMIAPMVGGLLIDAFGWRSAFVFALIFGAVISAGAGLVIYETHTGTRIPLDAVAVLRSYVDPFRNPRFASFVLQSGFSSGIFFTLTAAVSVIMKEQLGRSATEYGVWFLAFPVGFLIGNIVSSRLA 819
P+R F + LA I LIGPLA+H+FLP +P +K+ FA++DA LT+S+ + MA+STL YG+LSDRYGRRPVLL GL LF G + A + L+ GR++QA GAGCG L R+IARDAYG LVK I+YLTM YTLGPM+A + GG+LID GWRS F A I G +I+ + +V+YET L+ YV F + RF +FVLQ+GFSSG+F+ + AA S +MK+ LGRSATE+G +F+AFP+GF +GN++SSR++
Sbjct: 5 PNRRFLVTLASISLIGPLAIHMFLPAMPVIKSVFAISDALVGLTYSAALLVMAVSTLMYGSLSDRYGRRPVLLVGLALFTLGSGVSGIADSVYGLIAGRVIQAFGAGCGVTLARAIARDAYGTEGLVKVIAYLTMAYTLGPMLATLFGGMLIDLAGWRSLFWLAAIAGVLITTASRVVLYETRPKEDTQRKPSGFLQDYVALFSHARFTAFVLQTGFSSGLFYAMAAASSFLMKDYLGRSATEFGAYFMAFPIGFFLGNLLSSRVS 270
BLAST of mRNA_P-wetherbeei_contig20857.1.1 vs. uniprot
Match: A0A127EMX9_9HYPH (Bcr/CflA family efflux transporter n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EMX9_9HYPH) HSP 1 Score: 280 bits (715), Expect = 2.260e-89 Identity = 148/264 (56.06%), Postives = 187/264 (70.83%), Query Frame = 1
Query: 25 SRLFALCLAGIVLIGPLAVHLFLPVIPAVKAEFALTDATAQLTFSSGIFAMALSTLAYGTLSDRYGRRPVLLAGLGLFLAGCAIVATASTFGMLLTGRIVQAVGAGCGTALVRSIARDAYGQAQLVKAISYLTMFYTLGPMIAPMVGGLLIDAFGWRSAFVFALIFGAVISAGAGLVIYETHTGTRIPLDAVAVLRSYVDPFRNPRFASFVLQSGFSSGIFFTLTAAVSVIMKEQLGRSATEYGVWFLAFPVGFLIGNIVSSRL 816
R FA+ L I LI PLAVHLF PVIPAVK L+DA AQLTFS +F MA +TL YG+LSDRYGRRPVLL+GL LFL G + + A+T L+ GR+VQA+GAGC LVR+IARDA+ QLVKAI+YLTMF TLGPM++P +GG+LID GWRS F FAL+ G VI+ A +V+ ETH + ++SY FR PRF ++VLQ+GF++G F + A S +M E L R ATEYG++FL FP+GF GN +S+R+
Sbjct: 9 GRTFAIALGLIALITPLAVHLFFPVIPAVKKALGLSDAHAQLTFSISLFGMAFATLFYGSLSDRYGRRPVLLSGLALFLFGSVVSSLATTANALVLGRLVQAIGAGCALTLVRAIARDAFRAEQLVKAIAYLTMFGTLGPMVSPFIGGVLIDTLGWRSVFGFALVAGGVITIIAYMVMRETHPPENRHKTQESFVQSYAALFRRPRFNAYVLQTGFNTGAFMVMAVAASTMMTELLRRPATEYGLYFLLFPMGFFAGNFISTRV 272
BLAST of mRNA_P-wetherbeei_contig20857.1.1 vs. uniprot
Match: A0A6N7GY13_9HYPH (MFS transporter n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GY13_9HYPH) HSP 1 Score: 280 bits (717), Expect = 3.890e-89 Identity = 150/266 (56.39%), Postives = 188/266 (70.68%), Query Frame = 1
Query: 22 PSRLFALCLAGIVLIGPLAVHLFLPVIPAVKAEFALTDATAQLTFSSGIFAMALSTLAYGTLSDRYGRRPVLLAGLGLFLAGCAIVATASTFGMLLTGRIVQAVGAGCGTALVRSIARDAYGQAQLVKAISYLTMFYTLGPMIAPMVGGLLIDAFGWRSAFVFALIFGAVISAGAGLVIYETHTGTRIPLDAVAVLRSYVDPFRNPRFASFVLQSGFSSGIFFTLTAAVSVIMKEQLGRSATEYGVWFLAFPVGFLIGNIVSSRLA 819
PSRLFA LA I LIGP+ +HL+ PVIP VK L+DA AQLTFS +F MA +TLAYG LSDRYGRR ++L+GL +FL G A + M++ GR +QA+GA CG LVR+IA D YG QLVK I+YLTMFYTLGPMI+PMVGGLLID GWRS F FAL+ G++I AGA I ET + R P A + LR Y + + RF+ FVLQ+GFS+G F T+ A S MKE L R + E+G++FL FP+GFL G+ +S+RL+
Sbjct: 48 PSRLFAPVLASISLIGPMVIHLYFPVIPVVKIALRLSDAEAQLTFSIALFCMAFATLAYGALSDRYGRRRLMLSGLSIFLFGSVFAFAAESIAMMVIGRSLQAIGAACGVTLVRAIASDVYGPGQLVKVIAYLTMFYTLGPMISPMVGGLLIDTLGWRSVFGFALVVGSLILAGAYAAIPETRSAER-PAQA-SFLRGYRELLGSIRFSPFVLQTGFSTGTFLTIATASSAFMKELLDRPSFEFGLYFLLFPLGFLFGSFISTRLS 311
BLAST of mRNA_P-wetherbeei_contig20857.1.1 vs. uniprot
Match: A0A1F4G4D9_9PROT (MFS domain-containing protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4G4D9_9PROT) HSP 1 Score: 278 bits (710), Expect = 8.410e-89 Identity = 146/258 (56.59%), Postives = 186/258 (72.09%), Query Frame = 1
Query: 46 LAGIVLIGPLAVHLFLPVIPAVKAEFALTDATAQLTFSSGIFAMALSTLAYGTLSDRYGRRPVLLAGLGLFLAGCAIVATASTFGMLLTGRIVQAVGAGCGTALVRSIARDAYGQAQLVKAISYLTMFYTLGPMIAPMVGGLLIDAFGWRSAFVFALIFGAVISAGAGLVIYETHTGTRIPLDAVAVLRSYVDPFRNPRFASFVLQSGFSSGIFFTLTAAVSVIMKEQLGRSATEYGVWFLAFPVGFLIGNIVSSRLA 819
LA + LIGPLA+H FLPV+P VK+EF ++DA A LTFS +F +A +TL YG+LSDRYGRRPVLLAGL LF G + A +S+ LL GRI+QA+GAG L R+IARD YG LVK I+YLTM Y LGPMIAP+ GLL+D+ GWR AF FA + GA+I+A A +V+YETH + L YV F + RF +FVLQSGFS+G FF + AA + +MK+ LGRSATE+ ++FLAFP G+ +GN+ SSRL+
Sbjct: 3 LASVTLIGPLALHAFLPVMPEVKSEFGISDALAGLTFSISLFIIAFATLVYGSLSDRYGRRPVLLAGLALFTLGSIVSALSSSVTGLLVGRIIQALGAGGSGGLARAIARDTYGTDVLVKVIAYLTMAYALGPMIAPVAAGLLVDSTGWRGAFWFAALAGALIAAAAYVVLYETHAPEHRAQRGSSFLHDYVRLFSHLRFTAFVLQSGFSTGCFFAMAAANAFLMKDYLGRSATEFSMYFLAFPAGYFLGNLASSRLS 260
BLAST of mRNA_P-wetherbeei_contig20857.1.1 vs. uniprot
Match: A0A1F4D9V0_9PROT (Bcr/CflA family efflux transporter n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4D9V0_9PROT) HSP 1 Score: 278 bits (712), Expect = 1.300e-88 Identity = 142/273 (52.01%), Postives = 192/273 (70.33%), Query Frame = 1
Query: 1 RKLRALMPSRLFALCLAGIVLIGPLAVHLFLPVIPAVKAEFALTDATAQLTFSSGIFAMALSTLAYGTLSDRYGRRPVLLAGLGLFLAGCAIVATASTFGMLLTGRIVQAVGAGCGTALVRSIARDAYGQAQLVKAISYLTMFYTLGPMIAPMVGGLLIDAFGWRSAFVFALIFGAVISAGAGLVIYETHTGTRIPLDAVAVLRSYVDPFRNPRFASFVLQSGFSSGIFFTLTAAVSVIMKEQLGRSATEYGVWFLAFPVGFLIGNIVSSRLA 819
R +R + R FA LA I LIGPLA+H++LP +P +K+ F ++DA T+S+ + MA +TL YG+LSDRYGRRPVL AGL F G + A +F L+ GR++QA+GAGCG L R+IARDAYG +LVK I+YLTM YTLGP++A + GG+L+D GWRS F A G +I+A +GLV+YETH + +R Y F + RF +FVLQSGFSSG+F+ L AA S +MK+ LGRS TE+GV+F+AFP+G+ +GN++SSRL+
Sbjct: 20 RVMRRVPDWRFFA-TLASISLIGPLAIHMYLPAMPVIKSTFEVSDALVGWTYSAALVVMAAATLIYGSLSDRYGRRPVLFAGLLFFTIGSVVSGLAGSFYGLIAGRVIQALGAGCGLTLARAIARDAYGHDELVKVIAYLTMAYTLGPLMATLFGGVLVDTAGWRSLFALAAAAGVLIAAASGLVMYETHPKSDSQRKPSGFIREYAALFSHARFTAFVLQSGFSSGVFYPLAAAASFLMKDHLGRSGTEFGVYFIAFPIGYFLGNLLSSRLS 291
BLAST of mRNA_P-wetherbeei_contig20857.1.1 vs. uniprot
Match: A0A1H4L1C3_9HYPH (Bcr/CflA family efflux transporter n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A1H4L1C3_9HYPH) HSP 1 Score: 276 bits (705), Expect = 6.650e-88 Identity = 140/268 (52.24%), Postives = 190/268 (70.90%), Query Frame = 1
Query: 13 ALMPSRLFALCLAGIVLIGPLAVHLFLPVIPAVKAEFALTDATAQLTFSSGIFAMALSTLAYGTLSDRYGRRPVLLAGLGLFLAGCAIVATASTFGMLLTGRIVQAVGAGCGTALVRSIARDAYGQAQLVKAISYLTMFYTLGPMIAPMVGGLLIDAFGWRSAFVFALIFGAVISAGAGLVIYETHTGTRIPLDAVAVLRSYVDPFRNPRFASFVLQSGFSSGIFFTLTAAVSVIMKEQLGRSATEYGVWFLAFPVGFLIGNIVSSRL 816
A P R+FAL LA I L+ P A+HLFLPV P +K F ++DA AQ++FS + MA + L YG L+DRYGRRPVLL+GL LFL G + A++ L+ R+VQAVGAGCGT LVR+IARDAYG +LVK ISYLTMFYTLGPM++P V GLL+D F WR+ +F+ GA+I G L + ET G ++ +VL +Y + F +PRF ++VLQ GFS+ +FF+++AA + +MK+ L R +TE+G++F FP+GF GN +SSR+
Sbjct: 2 AFQPGRIFALALASIGLLTPFAIHLFLPVTPVLKEAFGISDALAQISFSLPLLVMAFANLVYGALADRYGRRPVLLSGLALFLIGSLLGMLANSITTLIIARVVQAVGAGCGTTLVRAIARDAYGPDKLVKVISYLTMFYTLGPMVSPTVAGLLLDHFTWRAVMIFSFASGAIIMLGTYLYVPETRPGVKLA-PGQSVLGNYRELFAHPRFIAYVLQPGFSTAVFFSISAASAFVMKDMLHRPSTEFGLYFFLFPLGFFSGNFISSRI 268
BLAST of mRNA_P-wetherbeei_contig20857.1.1 vs. uniprot
Match: A0A1F3YK50_9PROT (Bcr/CflA family efflux transporter n=3 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F3YK50_9PROT) HSP 1 Score: 274 bits (701), Expect = 5.750e-87 Identity = 140/266 (52.63%), Postives = 187/266 (70.30%), Query Frame = 1
Query: 22 PSRLFALCLAGIVLIGPLAVHLFLPVIPAVKAEFALTDATAQLTFSSGIFAMALSTLAYGTLSDRYGRRPVLLAGLGLFLAGCAIVATASTFGMLLTGRIVQAVGAGCGTALVRSIARDAYGQAQLVKAISYLTMFYTLGPMIAPMVGGLLIDAFGWRSAFVFALIFGAVISAGAGLVIYETHTGTRIPLDAVAVLRSYVDPFRNPRFASFVLQSGFSSGIFFTLTAAVSVIMKEQLGRSATEYGVWFLAFPVGFLIGNIVSSRLA 819
P F LA I L+GPLA+H+FLP +P +K+ FA++DA LT+S+ + MA+STL YG+LSDRYGRRPVLLAGL LF G + A + L+ GR++QA+GAGCG L R+IARDAYG LVK I+YLTM YTLGPM+A + GG+LID GWRS F A G +I+ + ++YETH + +V F + RF +FVLQ+GFSSG+F+ + AA S +MK+ LGRSATE+G++F+AFPVGF +GN++SSRL+
Sbjct: 25 PDWRFLATLASISLVGPLAIHMFLPAMPVIKSVFAISDALVGLTYSAALLVMAVSTLIYGSLSDRYGRRPVLLAGLFLFTLGSFVSGMADSVYGLIAGRVIQALGAGCGVTLARAIARDAYGTEGLVKVIAYLTMAYTLGPMLATLFGGMLIDMAGWRSLFWLAATSGLLIATASWGMLYETHPKDESRRKTSGFVHDFVALFSHLRFTAFVLQTGFSSGLFYAMAAAASFLMKDYLGRSATEFGIYFMAFPVGFFLGNLLSSRLS 290
BLAST of mRNA_P-wetherbeei_contig20857.1.1 vs. uniprot
Match: A0A6N7FCS7_9PROT (Bcr/CflA family efflux transporter n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FCS7_9PROT) HSP 1 Score: 270 bits (689), Expect = 2.310e-85 Identity = 144/266 (54.14%), Postives = 183/266 (68.80%), Query Frame = 1
Query: 22 PSRLFALCLAGIVLIGPLAVHLFLPVIPAVKAEFALTDATAQLTFSSGIFAMALSTLAYGTLSDRYGRRPVLLAGLGLFLAGCAIVATASTFGMLLTGRIVQAVGAGCGTALVRSIARDAYGQAQLVKAISYLTMFYTLGPMIAPMVGGLLIDAFGWRSAFVFALIFGAVISAGAGLVIYETHTGTRIPLDAVAVLRSYVDPFRNPRFASFVLQSGFSSGIFFTLTAAVSVIMKEQLGRSATEYGVWFLAFPVGFLIGNIVSSRLA 819
P +F L LA + IGPLAVH FLPV+P+V+ F +++A AQLTFS +F MA +TLAYG+LSDR+GRRPVLL+G+GLFLAG + A A + VGA C L R+IARD +G+A LV+A+SYLTM YTLGPMIAP +GG L+DAFGWRS F AL GA I A V++ET + L Y RN RF ++V Q+GFSSG FFTL A S +M++ LGRSA+EYG++FL FPVG+ +GN+VSSRL+
Sbjct: 12 PGWVFLLTLASVSFIGPLAVHFFLPVMPSVRDAFGVSEALAQLTFSISLFVMAFATLAYGSLSDRHGRRPVLLSGIGLFLAGSVLSALADSXXXXXXXXXXXXVGAACSMTLTRAIARDLFGEAGLVRALSYLTMAYTLGPMIAPPLGGFLVDAFGWRSVFWTALGLGAAIGAVVLSVLHETRAKPEAGVRRQGYLADYAMLCRNLRFVAYVCQTGFSSGTFFTLAAGASFLMRDHLGRSASEYGLYFLFFPVGYWVGNLVSSRLS 277 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20857.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20857.1.1 >prot_P-wetherbeei_contig20857.1.1 ID=prot_P-wetherbeei_contig20857.1.1|Name=mRNA_P-wetherbeei_contig20857.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=267bp MPSRLFALCLAGIVLIGPLAVHLFLPVIPAVKAEFALTDATAQLTFSSGIback to top mRNA from alignment at P-wetherbeei_contig20857:3..821- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20857.1.1 ID=mRNA_P-wetherbeei_contig20857.1.1|Name=mRNA_P-wetherbeei_contig20857.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=819bp|location=Sequence derived from alignment at P-wetherbeei_contig20857:3..821- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20857:3..821- >mRNA_P-wetherbeei_contig20857.1.1 ID=mRNA_P-wetherbeei_contig20857.1.1|Name=mRNA_P-wetherbeei_contig20857.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=801bp|location=Sequence derived from alignment at P-wetherbeei_contig20857:3..821- (Phaeothamnion wetherbeei SAG_119_79)back to top |