mRNA_P-wetherbeei_contig208.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig208.1.1 vs. uniprot
Match: A0A352AHJ1_9CYAN ((2Fe-2S)-binding protein n=1 Tax=Cyanobacteria bacterium UBA9273 TaxID=2055791 RepID=A0A352AHJ1_9CYAN) HSP 1 Score: 252 bits (644), Expect = 3.670e-78 Identity = 118/215 (54.88%), Postives = 156/215 (72.56%), Query Frame = 1
Query: 58 EKDVEQFQWFKQWYPLRAVDFLDASRPHAVQLLGRELVLWNDGST-WQCYEDACPHRMAPLSEGRIESDGSLLCAYHAWRFAGADGKCVSIPQS-DAMVREKHMGSPMACAKSYPVTVAQDMIFVWPESGPDAVAAAAAQPPPLVPEMEDVELVTAGRVRPLTVNIRDLPYSWDMFFENVVDAAHVPVSHHGLVGNRYTGAQPLNFKSLRPVTTK 696
E++ E FQW KQWYP+ VDFLD SRPHA+QLLG+++VLW DGS W+C+EDACPHR+ PLSEGR+ESDG+LLCAYHAWRF A+G CVSIPQS D KH + +CA +YP Q +++VWPESG A + + P ++PE+E+ + +V L+ NIRDLPY WD F EN+ D AHVPVSHHG+VG+RY A+ + ++R ++T+
Sbjct: 20 EEEKELFQWTKQWYPVAVVDFLDPSRPHAMQLLGKDIVLWRDGSRQWRCFEDACPHRLVPLSEGRVESDGTLLCAYHAWRF-DAEGNCVSIPQSKDQETEAKHCSNKKSCAVTYPTQERQGLLWVWPESGQAAQVESQLRTPRIIPELEE----GSDKVVQLSWNIRDLPYGWDFFMENIADPAHVPVSHHGIVGSRYKDAKYYDMPNIREISTQ 229
BLAST of mRNA_P-wetherbeei_contig208.1.1 vs. uniprot
Match: UPI00047934FE (Rieske 2Fe-2S domain-containing protein n=1 Tax=Fischerella sp. PCC 9605 TaxID=1173024 RepID=UPI00047934FE) HSP 1 Score: 250 bits (638), Expect = 2.900e-77 Identity = 117/215 (54.42%), Postives = 156/215 (72.56%), Query Frame = 1
Query: 58 EKDVEQFQWFKQWYPLRAVDFLDASRPHAVQLLGRELVLWNDGS-TWQCYEDACPHRMAPLSEGRIESDGSLLCAYHAWRFAGADGKCVSIPQS-DAMVREKHMGSPMACAKSYPVTVAQDMIFVWPESGPDAVAAAAAQPPPLVPEMEDVELVTAGRVRPLTVNIRDLPYSWDMFFENVVDAAHVPVSHHGLVGNRYTGAQPLNFKSLRPVTTK 696
E++ + FQW KQWYP+ V FLD+SRPHA+QLLG+ LVLW DGS W+C+ED CPHR+APLSEGR+ESDG+L+CAYHAWRF ++GKCVSIPQS D K+ +P +CA +YP Q +++VW E+GP A + + P +VPE+ED +G+ L+ N+RDLPY WD F ENV D AHVPVSHHG++GNRY A+ + +R ++T+
Sbjct: 20 EEEEKIFQWTKQWYPVAVVGFLDSSRPHAMQLLGKNLVLWRDGSGKWRCFEDFCPHRLAPLSEGRVESDGTLMCAYHAWRF-DSEGKCVSIPQSKDQQTEAKNCSNPKSCAVAYPTQERQGLLWVWAEAGPQAQVESQLRTPRIVPELED----DSGKAVQLSWNVRDLPYGWDFFMENVSDPAHVPVSHHGIIGNRYKDAKYYDMIRVREMSTQ 229
BLAST of mRNA_P-wetherbeei_contig208.1.1 vs. uniprot
Match: A0A6P0S377_9CYAN (Rieske 2Fe-2S domain-containing protein n=2 Tax=unclassified Symploca TaxID=2620434 RepID=A0A6P0S377_9CYAN) HSP 1 Score: 249 bits (637), Expect = 4.090e-77 Identity = 116/215 (53.95%), Postives = 153/215 (71.16%), Query Frame = 1
Query: 58 EKDVEQFQWFKQWYPLRAVDFLDASRPHAVQLLGRELVLWND-GSTWQCYEDACPHRMAPLSEGRIESDGSLLCAYHAWRFAGADGKCVSIPQS-DAMVREKHMGSPMACAKSYPVTVAQDMIFVWPESGPDAVAAAAAQPPPLVPEMEDVELVTAGRVRPLTVNIRDLPYSWDMFFENVVDAAHVPVSHHGLVGNRYTGAQPLNFKSLRPVTTK 696
EKDVEQFQW KQWYP+ +FLD+SRPHA+QLLG+ LVLW D W C+++ACPHR+ PLSEGR+ESDG+LLCAYHAWRF G +G+CV IPQS D KH +P +CA SYP Q ++++WPESG + + P +VPE+E+ + +V L NIRD PY WD + ENV+D AHVP+SHHG++G+RY AQ L+ +R ++T+
Sbjct: 20 EKDVEQFQWTKQWYPVAVAEFLDSSRPHAIQLLGKNLVLWRDHNKQWHCFDNACPHRLVPLSEGRVESDGTLLCAYHAWRFDG-EGRCVKIPQSKDKETEAKHCANPKSCAISYPTQERQGLVWIWPESGTQGQIESRQRSPRIVPELEE----NSDQVVQLWWNIRDYPYGWDFWMENVLDPAHVPISHHGIMGDRYQHAQYLDMIRIREMSTQ 229
BLAST of mRNA_P-wetherbeei_contig208.1.1 vs. uniprot
Match: A0A856MM91_9CYAN ((2Fe-2S)-binding protein n=1 Tax=Brasilonema sennae CENA114 TaxID=415709 RepID=A0A856MM91_9CYAN) HSP 1 Score: 250 bits (638), Expect = 4.340e-77 Identity = 119/209 (56.94%), Postives = 151/209 (72.25%), Query Frame = 1
Query: 76 FQWFKQWYPLRAVDFLDASRPHAVQLLGRELVLWNDGS-TWQCYEDACPHRMAPLSEGRIESDGSLLCAYHAWRFAGADGKCVSIPQS-DAMVREKHMGSPMACAKSYPVTVAQDMIFVWPESGPDAVAAAAAQPPPLVPEMEDVELVTAGRVRPLTVNIRDLPYSWDMFFENVVDAAHVPVSHHGLVGNRYTGAQPLNFKSLRPVTTK 696
FQW KQWYP+ V+FLD SRPHA+QLLG+++VLW DGS W+C+ED CPHR+APLSEGR+E+DG+LLCAYHAWRF ++G CVSIPQS D KH +P +CA ++P Q +++VW ESGP A + + + P LVPE+E A RV L NIRDLPY WD F ENV D AHVPVSHHG+VGNRY A+ + +R ++T+
Sbjct: 42 FQWTKQWYPVAVVEFLDPSRPHAMQLLGKDIVLWRDGSGKWRCFEDFCPHRLAPLSEGRVEADGTLLCAYHAWRF-DSEGNCVSIPQSLDKQTEAKHCSNPKSCAVAFPTQECQGLLWVWSESGPQAQSESQLRTPRLVPELES----DADRVVHLFWNIRDLPYGWDFFMENVADPAHVPVSHHGIVGNRYKDAKYYDMIRVRQMSTQ 245
BLAST of mRNA_P-wetherbeei_contig208.1.1 vs. uniprot
Match: A0A8J6SPF2_9CYAN (Rieske 2Fe-2S domain-containing protein n=6 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J6SPF2_9CYAN) HSP 1 Score: 249 bits (636), Expect = 5.770e-77 Identity = 117/217 (53.92%), Postives = 156/217 (71.89%), Query Frame = 1
Query: 52 ADEKDVEQFQWFKQWYPLRAVDFLDASRPHAVQLLGRELVLWNDGS-TWQCYEDACPHRMAPLSEGRIESDGSLLCAYHAWRFAGADGKCVSIPQS-DAMVREKHMGSPMACAKSYPVTVAQDMIFVWPESGPDAVAAAAAQPPPLVPEMEDVELVTAGRVRPLTVNIRDLPYSWDMFFENVVDAAHVPVSHHGLVGNRYTGAQPLNFKSLRPVTTK 696
++E++ E FQW KQWYP+ VDFLD SRPHA+QLLG+++VLW DGS W+C+ED CPHR+APLSEGR+ESDG+LLCAYHAWRF ++G CVSIPQS D KH + +CA YP Q +++VW ESG +A + ++ P ++PE+E+ + RV L N+RDLPY WD F ENV D AHVPVSHHG+VG+RY A+ + +R ++T+
Sbjct: 18 SNEEEKELFQWTKQWYPVAVVDFLDPSRPHAIQLLGKDIVLWRDGSGQWRCFEDFCPHRLAPLSEGRVESDGTLLCAYHAWRF-DSEGNCVSIPQSIDKQTEAKHCSNKKSCAVVYPTQERQGLLWVWAESGQEAQVESQSRAPRIIPELEE----DSDRVVQLFWNVRDLPYGWDFFMENVADPAHVPVSHHGIVGSRYKDAKYYDMPRIREMSTQ 229
BLAST of mRNA_P-wetherbeei_contig208.1.1 vs. uniprot
Match: UPI0016883242 (Rieske 2Fe-2S domain-containing protein n=3 Tax=Nostocales TaxID=1161 RepID=UPI0016883242) HSP 1 Score: 247 bits (631), Expect = 3.140e-76 Identity = 119/212 (56.13%), Postives = 146/212 (68.87%), Query Frame = 1
Query: 64 DVEQFQWFKQWYPLRAVDFLDASRPHAVQLLGRELVLWNDG-STWQCYEDACPHRMAPLSEGRIESDGSLLCAYHAWRFAGADGKCVSIPQS-DAMVREKHMGSPMACAKSYPVTVAQDMIFVWPESGPDAVAAAAAQPPPLVPEMEDVELVTAGRVRPLTVNIRDLPYSWDMFFENVVDAAHVPVSHHGLVGNRYTGAQPLNFKSLRPVTT 693
D E FQW KQWYP+ V+FLD SRPHA+QLLG++LV+W D W C+ED CPHR+APLSEGR+ESDG+LLCAYHAWRF + GKCVSIPQS D KH + +CA SYP Q +++VW ESG +A + + P ++PE+ED L T L N RDLPY WD F ENV D AHVPVSHHGLVGNRY A L+ ++ ++T
Sbjct: 22 DEETFQWTKQWYPVAVVNFLDPSRPHAIQLLGKDLVVWRDNFHKWSCFEDFCPHRLAPLSEGRVESDGTLLCAYHAWRF-DSQGKCVSIPQSKDEQTATKHCSNSRSCAVSYPTQELQGLLWVWAESGKEAQLESQLRTPRIIPELEDKSLQTTH----LFWNFRDLPYGWDFFMENVADPAHVPVSHHGLVGNRYQDANYLDLVCIKQIST 228
BLAST of mRNA_P-wetherbeei_contig208.1.1 vs. uniprot
Match: A0A6L9ZRD3_9CYAN (Rieske 2Fe-2S domain-containing protein n=1 Tax=Okeania sp. SIO3B5 TaxID=2607811 RepID=A0A6L9ZRD3_9CYAN) HSP 1 Score: 247 bits (631), Expect = 3.310e-76 Identity = 120/214 (56.07%), Postives = 147/214 (68.69%), Query Frame = 1
Query: 61 KDVEQFQWFKQWYPLRAVDFLDASRPHAVQLLGRELVLWNDGST-WQCYEDACPHRMAPLSEGRIESDGSLLCAYHAWRFAGADGKCVSIPQS-DAMVREKHMGSPMACAKSYPVTVAQDMIFVWPESGPDAVAAAAAQPPPLVPEMEDVELVTAGRVRPLTVNIRDLPYSWDMFFENVVDAAHVPVSHHGLVGNRYTGAQPLNFKSLRPVTTK 696
K E FQW KQWYP+ V+FLD SRPH +QLLG+ELVLW DGS W C+ED CPHR+APLSEGR+ESDG+LLC+YHAWRF A G CVSIPQS D KH + +CA +YP V Q +I+VW ESG A + + P L+PE+E + RV NIRD PY WD F ENV+D AHV +SHHG+VGNRY A+ N S+R ++T+
Sbjct: 24 KQEETFQWTKQWYPVAVVEFLDPSRPHKIQLLGKELVLWRDGSAKWACFEDFCPHRLAPLSEGRVESDGTLLCSYHAWRF-DAQGNCVSIPQSKDKQTEIKHCSNSKSCAVAYPTQVNQGLIWVWAESGLQAQQESQLRKPRLIPELES----DSDRVVKFLWNIRDFPYGWDFFIENVIDPAHVGISHHGIVGNRYKDAKYCNLSSIRQMSTE 232
BLAST of mRNA_P-wetherbeei_contig208.1.1 vs. uniprot
Match: A0A846FN29_9CYAN (Rieske 2Fe-2S domain-containing protein n=1 Tax=Cyanothece sp. SIO1E1 TaxID=2607788 RepID=A0A846FN29_9CYAN) HSP 1 Score: 246 bits (629), Expect = 8.250e-76 Identity = 115/209 (55.02%), Postives = 148/209 (70.81%), Query Frame = 1
Query: 76 FQWFKQWYPLRAVDFLDASRPHAVQLLGRELVLWNDGS-TWQCYEDACPHRMAPLSEGRIESDGSLLCAYHAWRFAGADGKCVSIPQS-DAMVREKHMGSPMACAKSYPVTVAQDMIFVWPESGPDAVAAAAAQPPPLVPEMEDVELVTAGRVRPLTVNIRDLPYSWDMFFENVVDAAHVPVSHHGLVGNRYTGAQPLNFKSLRPVTTK 696
FQW KQWYP+ VDFLD +RPHA+QLLG++LVLW DG+ W+C+ED CPHR+APLSEGR+ESDG+L+CAYHAWRF GADGKCV+IPQS D K+ + + A YP Q +++VWPESG A + Q P ++PE+ED +GR L +RDLPY WD F ENV D AHVPVSHHG++GNRY A + ++ ++T+
Sbjct: 34 FQWTKQWYPIAVVDFLDPARPHAIQLLGQDLVLWRDGAGIWRCFEDFCPHRLAPLSEGRVESDGTLMCAYHAWRF-GADGKCVNIPQSKDPQTEAKNCSNHKSAAVVYPTQERQGLLWVWPESGSQAALESQLQTPRIIPELED----NSGRTVKLYWYVRDLPYGWDFFMENVADPAHVPVSHHGIIGNRYRDANYYDMIPVKQISTQ 237
BLAST of mRNA_P-wetherbeei_contig208.1.1 vs. uniprot
Match: A0A7Z9C162_9CYAN (Rieske (2Fe-2S) region n=1 Tax=Planktothrix paucivesiculata PCC 9631 TaxID=671071 RepID=A0A7Z9C162_9CYAN) HSP 1 Score: 245 bits (625), Expect = 1.650e-75 Identity = 117/215 (54.42%), Postives = 150/215 (69.77%), Query Frame = 1
Query: 58 EKDVEQFQWFKQWYPLRAVDFLDASRPHAVQLLGRELVLWNDGS-TWQCYEDACPHRMAPLSEGRIESDGSLLCAYHAWRFAGADGKCVSIPQS-DAMVREKHMGSPMACAKSYPVTVAQDMIFVWPESGPDAVAAAAAQPPPLVPEMEDVELVTAGRVRPLTVNIRDLPYSWDMFFENVVDAAHVPVSHHGLVGNRYTGAQPLNFKSLRPVTTK 696
E + EQFQW KQWYP+ V+FLD +RPHA+QLLG ++VLW DGS W+C+ DACPHR+ PLSEGR+ESDG+LLCAYHAWRF ++G CVSIPQS DA KH +P +CA YP Q +++VW ESG A + + P LVPE+E+ + ++ L RD+PY WD F ENV D AHVPVSHHG+VGNRY A+ + S R ++T+
Sbjct: 17 ETETEQFQWTKQWYPVAVVEFLDPTRPHAMQLLGEDIVLWRDGSGQWRCFADACPHRLVPLSEGRVESDGTLLCAYHAWRF-NSEGHCVSIPQSQDAETEAKHCSNPKSCAVVYPTQERQGLLWVWGESGSQAQQESQLRAPRLVPELEE----NSDQIVKLPWGFRDIPYGWDFFMENVSDPAHVPVSHHGIVGNRYKDAKYYDMISRRKISTQ 226
BLAST of mRNA_P-wetherbeei_contig208.1.1 vs. uniprot
Match: A0A1U7MXZ4_9CYAN ((2Fe-2S)-binding protein n=17 Tax=Moorena TaxID=1155738 RepID=A0A1U7MXZ4_9CYAN) HSP 1 Score: 245 bits (626), Expect = 1.890e-75 Identity = 120/214 (56.07%), Postives = 149/214 (69.63%), Query Frame = 1
Query: 61 KDVEQFQWFKQWYPLRAVDFLDASRPHAVQLLGRELVLWNDGS-TWQCYEDACPHRMAPLSEGRIESDGSLLCAYHAWRFAGADGKCVSIPQSDAMVRE-KHMGSPMACAKSYPVTVAQDMIFVWPESGPDAVAAAAAQPPPLVPEMEDVELVTAGRVRPLTVNIRDLPYSWDMFFENVVDAAHVPVSHHGLVGNRYTGAQPLNFKSLRPVTTK 696
K E FQW KQWYP+ V+FL SRPH +QLLG+ELVLW DGS W+C+ED CPHR+APLSEGR+ESDG+LLCAYHAWRF A G CVSIPQS E K+ +P +CA +YP Q +++VWPESG A + + P L+PE+E + RV L NIRDLPY WD F ENV D AHVPVSHHG++G+RY A+ + LR ++T+
Sbjct: 24 KQDETFQWTKQWYPVAVVEFLAPSRPHKIQLLGKELVLWRDGSGKWRCFEDFCPHRLAPLSEGRVESDGTLLCAYHAWRF-DAQGNCVSIPQSQDQETELKNCSNPKSCAVAYPTQENQGLLWVWPESGTKAQQESQLRKPRLIPELES----DSDRVVKLFWNIRDLPYGWDFFMENVADPAHVPVSHHGIMGSRYEDAKYYDMPGLREISTQ 232 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig208.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig208.1.1 >prot_P-wetherbeei_contig208.1.1 ID=prot_P-wetherbeei_contig208.1.1|Name=mRNA_P-wetherbeei_contig208.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=232bp EVGPSGDTADPDVFKTDADEKDVEQFQWFKQWYPLRAVDFLDASRPHAVQback to top mRNA from alignment at P-wetherbeei_contig208:413..1285- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig208.1.1 ID=mRNA_P-wetherbeei_contig208.1.1|Name=mRNA_P-wetherbeei_contig208.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=873bp|location=Sequence derived from alignment at P-wetherbeei_contig208:413..1285- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig208:413..1285- >mRNA_P-wetherbeei_contig208.1.1 ID=mRNA_P-wetherbeei_contig208.1.1|Name=mRNA_P-wetherbeei_contig208.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=696bp|location=Sequence derived from alignment at P-wetherbeei_contig208:413..1285- (Phaeothamnion wetherbeei SAG_119_79)back to top |