mRNA_P-wetherbeei_contig2074.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig2074.3.1
Unique NamemRNA_P-wetherbeei_contig2074.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig2074.3.1 vs. uniprot
Match: A0A7S3LUH2_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LUH2_9STRA)

HSP 1 Score: 186 bits (471), Expect = 4.390e-50
Identity = 110/274 (40.15%), Postives = 159/274 (58.03%), Query Frame = 1
Query:  229 PATELRLFDANSDAKPMASGEHERKAIVIGAGVVGTCTAYELAKKGYKVVVIDAAAGPGQECSACAAGGMQRSNPLVNRSSWVDVLRASFPSLFSRGEDGAAGGADRSGSEPYRFFHVQWRSVLADPHFWRWLAGFSYFSLAQPREQAARQKEMLAFTDWAVDEMA-VLMRRHGI-AERCGYSTRGALQVLYDSRAAVRNSDSHYTSKERSTLVSLERALELEPSLALQKRLPTYGRFEPDAAMGNSEVLTRELAAICLTDPTLDVTFRFGLRV 1044
            P T L + + NS  K    G  ++K IV+G G +G  TAY+LAKKGY V VI++ +    ECS+CAAGGMQRSNP+V+R  WV V++  FP L S       GG      E + FF + +   + DPHF RW++ FSY SL    +   +Q EML FTD+A+DE+   L   +G+  ++ GYS RGA+ +++   + V+ S  +  S E   +++ +   + EPS+      PT  RF+  A   +SE  T+ LA  C+TDPTLDVTF +  +V
Sbjct:   30 PKTSLAI-NTNSSKK----GNKDKKIIVVGGGCLGVSTAYKLAKKGYSVSVIESRSAAADECSSCAAGGMQRSNPMVSREKWVSVIKCMFPRLSSI----VLGGEP----EKFNFFQISFLKTVTDPHFLRWISAFSYGSLFPNEDLKKKQGEMLKFTDFAIDEIKNTLESDYGVMGKKSGYSQRGAMALVFSDPSQVKPSAKN--SHEPQKIITGDDIFKQEPSIKEMTHKPTAVRFDYKALAADSERFTKALAEKCVTDPTLDVTFVYDTKV 288          
BLAST of mRNA_P-wetherbeei_contig2074.3.1 vs. uniprot
Match: A0A7S4SH41_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SH41_9STRA)

HSP 1 Score: 173 bits (438), Expect = 3.980e-45
Identity = 101/260 (38.85%), Postives = 146/260 (56.15%), Query Frame = 1
Query:  283 SGEHERKAIVIGAGVVGTCTAYELAKKGYKVVVIDAAAGPGQECSACAAGGMQRSNPLVNRSSWVDVLRASFPSLFSRGEDGAAGGADRSGSEPYRFFHVQWRSVLADPHFWRWLAGFSYFSLAQPREQAARQKEMLAFTDWAVDEMAVLMR--RHGIAERCGYSTRGALQVLYDSRAAVRNSDSHY-----TSK---ERSTLVSLERALELEPSLALQKRLPTYGRFEPDAAMGNSEVLTRELAAICLTDPTLDVTFRF 1032
            SG  +++ IVIG GVVG   AY+LAK G +VV+++  + PG+ECSACAAGGMQRSNP+V+RS+W+ VL+   P     G             E +RFFH  +   ++DP F RW+  F+  S+     QA ++ E L FT +AVD+M  +M      +A+  GY+ RG++ + YDS     + +S       TSK   E S  +      ++EPS+ L K  PT  ++E +A   NSE  T ELA  C+ D  LDV+  +
Sbjct:   57 SGSKKKRVIVIGGGVVGVTAAYKLAKSGKQVVILEPRSQPGKECSACAAGGMQRSNPVVDRSTWISVLQCMSPLPVWLGGP----------KENFRFFHQNYGETISDPFFLRWIYTFTMTSIFPDAHQAEKRVEQLKFTKYAVDDMVRMMEDSEDPMAKVSGYNKRGSVSISYDSILEEEDDESSTKKISPTSKMSYEPSRSIDASELFQIEPSVRLMKVAPTSAKYEDEAKAANSERFTLELARRCVEDRELDVSIEY 306          
BLAST of mRNA_P-wetherbeei_contig2074.3.1 vs. uniprot
Match: A0A7S4K2X6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K2X6_9STRA)

HSP 1 Score: 144 bits (362), Expect = 1.250e-36
Identity = 74/166 (44.58%), Postives = 107/166 (64.46%), Query Frame = 1
Query:  325 VVGTCTAYELAKKGYKVVVIDAAAGPGQECSACAAGGMQRSNPLVNRSSWVDVLRASFPSLFSRGEDGAAGGADRSGSEPYRFFHVQWRSVLADPHFWRWLAGFSYFSLAQPREQAARQKEMLAFTDWAVDEMAVLMR--RHGIAERCGYSTRGALQVLYDSRAAV 816
            VVG   AY+LA KG+ V +++  + PG+ECS+CAAGGMQRSNP+V+R++W+ V +  FP           GG D+     Y FFH+ W + L+DP F RW + F+  SL    +Q  RQ+EML FTD+AV +M  +MR  +  ++ER G++ RGAL + YD++AA 
Sbjct:   40 VVGVTAAYKLALKGHSVALLEPRSEPGKECSSCAAGGMQRSNPVVDRNTWIAVTKQIFPPARY-----VLGGDDKEEEGTYNFFHICWGTCLSDPFFLRWASTFTKTSLFPCGDQRYRQEEMLKFTDFAVKDMIAMMRDEQDNMSERSGWNPRGALSLSYDAKAAA 200          
BLAST of mRNA_P-wetherbeei_contig2074.3.1 vs. uniprot
Match: A0A7S0B166_9STRA (Hypothetical protein (Fragment) n=2 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0B166_9STRA)

HSP 1 Score: 130 bits (326), Expect = 1.210e-32
Identity = 67/156 (42.95%), Postives = 98/156 (62.82%), Query Frame = 1
Query:  355 AKKGYKVVVIDAAAGPGQECSACAAGGMQRSNPLVNRSSWVDVLRASFPSLFSRGEDGAAGGADRSGSEPYRFFHVQWRSVLADPHFWRWLAGFSYFSLAQPREQAARQKEMLAFTDWAVDEMAVLM--RRHGIAERCGYSTRGALQVLYDSRAAV 816
            A KG+ VV+++  + PG+ECSACAAGGMQRSNP+V+R +W+ V ++  P           GG+D    EPY+FFH+ W   + DP F RW   F+  S   P +Q  +QKEMLAFTD+AV +M  +M  ++  +A + GY+  G+L + YD+ A+ 
Sbjct:    1 ALKGHSVVLLENRSDPGKECSACAAGGMQRSNPVVDRGTWIAVTKSIMPMTQY-----ILGGSD----EPYKFFHIDWIKSITDPFFLRWSLTFARTSFLPPADQTDKQKEMLAFTDFAVMDMVKMMNDKKDNMAIKSGYNPSGSLSLSYDAPAST 147          
BLAST of mRNA_P-wetherbeei_contig2074.3.1 vs. uniprot
Match: A0A5J4YM11_PORPP (D-amino acid dehydrogenase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YM11_PORPP)

HSP 1 Score: 125 bits (313), Expect = 1.290e-27
Identity = 101/297 (34.01%), Postives = 141/297 (47.47%), Query Frame = 1
Query:  283 SGEHER-KAIVIGAGVVGTCTAYELAKKGYKVVVIDAAAGPGQECSACAAGGMQRSNPLVNRSSWVDVLRASFP---SLF-------SRGEDG-----------------------AAGGAD--------RSGSEPYRFFHVQWRSVLADPHFWRWLAGFSYFSLAQPR-EQAARQKEMLAFTDWAVDEMAVLMRRHG---IAERCGYSTRGALQVLYDSRAAVRNSDSHYTSK----------ERSTLVSLERALELEPSLALQK--RLPTYGRFEPDAAMGNSEVLTRELAAICL 999
            S  H R  A+VIGAGV G  +AYELA++GY V+V+DAAA    ECSA  AGGMQ+ NP V+ S ++ VL++  P   SLF        + ED                        A+ GAD        R G E ++FF +   + L D HF RW   ++Y S+ +    +  RQ+ MLAFT WA+D++  LM+      IA + G    GAL++L D        D    +K          E + L+   +   +EP LA  +  R      F+  AA  N E LT E+A I +
Sbjct:   59 SARHTRHSAVVIGAGVAGITSAYELARQGYSVLVLDAAAKVSSECSAAPAGGMQKMNPNVDSSMFLAVLKSFLPRWSSLFRWRSGSHEQDEDHGNPEDRPRQNSRMIARQNESVNVASAGADQQKMVKRERGGEEAFQFFRISLWNTLTDVHFLRWFVWYAYSSVIEDACVREYRQRHMLAFTCWAIDDLISLMKHSHFGTIARKAGLVQTGALKLLDDPEEFQALLDRKAENKPIGWSDARDMEPTELIDRAKLFSMEPWLARSRHARHLVGAIFQTQAASANCESLTEEVAKIAV 355          
BLAST of mRNA_P-wetherbeei_contig2074.3.1 vs. uniprot
Match: F2UKG3_SALR5 (C3H1-type domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UKG3_SALR5)

HSP 1 Score: 114 bits (285), Expect = 8.690e-24
Identity = 78/204 (38.24%), Postives = 107/204 (52.45%), Query Frame = 1
Query:  298 RKAIVIGAGVVGTCTAYELAKKGYKVVVIDAAAGPGQECSACAAGGMQRSNPLVNRSSWVDVLRASFPSLFSRGEDGAAGGADRSGSEPYRFFHVQWRSVLADPHFWRWLAGFSYFSLAQPRE-QAARQKEMLAFTDWAVDEMAVLMRRHG--IAERCGYSTRGALQVLYDSRAAVRNSDSHYTSKERSTLVSLERALELEPSL 900
            +KAIVIG GVVG  TA ELAK+G +V +I+A +G   ECS  AAGGMQR+NP VNR SW   +++   SL             R+   P     +    V+ DP F RW   F+  SL + +E QA + + ML FTDWAVD +  +M      +A+    +T GAL++LYD           +  +E    V  +    +EPSL
Sbjct:   88 KKAIVIGGGVVGVTTAAELAKRGIQVTLIEAGSGFANECSYAAAGGMQRTNPQVNRDSWRATVKSWLASL----------NPFRANDAPLPGVFIS-PKVMFDPQFRRWFRLFTVSSLYRSQEDQAYQTQHMLDFTDWAVDSILNVMHEDDGFLAKAANLNTTGALKLLYDECDLDPERHRMFNGREPWGFVQKQDLATVEPSL 280          
BLAST of mRNA_P-wetherbeei_contig2074.3.1 vs. uniprot
Match: A0A7S4LBK9_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LBK9_9EUGL)

HSP 1 Score: 107 bits (268), Expect = 5.230e-23
Identity = 65/175 (37.14%), Postives = 89/175 (50.86%), Query Frame = 1
Query:  304 AIVIGAGVVGTCTAYELAKKGYKVVVIDAAAGPGQECSACAAGGMQRSNPLVNRSSWVDVLRASFPSLFSRGEDGAAGGADRSGSEPYRFFHVQWRSVLADPHFWRWLAGFSYFSL-AQPREQAARQKEMLAFTDWAVDEMAVLMR--RHGIAERCGYSTRGALQVLYDSRAAVR 819
            A+VIG GVVG CTAYELAK+GY V +ID+      ECSA  AGGMQ SN   +RS W  +     P                  SE +  + ++W + + DPH+  W+  FS   L A+  E   R+  ML+FT W++ +M  LM   R  +A     S  G + VL + +A  R
Sbjct:   66 AVVIGGGVVGVCTAYELAKRGYSVKLIDSGDEISSECSAATAGGMQCSNVAFDRSHWKSIFLGLLP-----------------WSELFGNYKIRWTTAVYDPHWIPWMLTFSAHGLFAKSEEDLQRETNMLSFTAWSIRQMLQLMHQDRGNLANAADLSVDGTVAVLSNGKAYAR 223          
BLAST of mRNA_P-wetherbeei_contig2074.3.1 vs. uniprot
Match: A0A0G4H2M6_VITBC (DAO domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H2M6_VITBC)

HSP 1 Score: 106 bits (264), Expect = 3.470e-21
Identity = 83/277 (29.96%), Postives = 130/277 (46.93%), Query Frame = 1
Query:  298 RKAIVIGAGVVGTCTAYELAKKGYKVVVIDAA----AGPGQECSACAAGGMQRSNPLVNRSSWVDVLR-----------ASFPSLFSRGEDGAAGGADRSGSE--------------------PYRFFHVQWRSVLADPHFWRWLAGFSYFSLAQPREQAARQKEMLAFTDWAVDEMAVLMRRHGIAERCGYSTRGALQVLY--DSRAAVRNSDSHY------TSKERSTLVSLERALELEPSLALQKRLPTYGRFEPDAAMGNSEVLTRELAAICL 999
            R+AI++G GVVG  TAY+L+K+G+ V VI+AA    A  G   SA +AGGMQR N ++    W   ++           A+ P+       GA G  + +  E                    P+ FF ++ R+ L DPHF+ WL  F+  S         RQK+ML+FT+WA+D  +  + +  +    G+++ GA  V+Y  D     R   + +       SKE  T++ L +    EP L      P     E ++ MG+S   T++L  +C+
Sbjct:   43 RQAIIVGGGVVGISTAYQLSKRGFDVSVIEAAPLLTAADGS-ASAVSAGGMQRVNVIMGPKEWAKTVQMFIKSGITDRLAAAPTQIRHYFAGAQGREETARKEKEAFEKALVDPAANLKRLQEPFNFFRLRSRA-LWDPHFYWWLTQFTATSFLPLERLKTRQKDMLSFTEWAIDLTSHAIHKEHL--NVGHASTGAAFVIYTPDELEKARQEVAAHPQGFAKASKEPRTVMELNKVASREPCLRQMVFEPAGALVETESRMGDSRRFTQQLGQVCV 315          
BLAST of mRNA_P-wetherbeei_contig2074.3.1 vs. uniprot
Match: A0A0G4FXE8_9ALVE (DAO domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FXE8_9ALVE)

HSP 1 Score: 103 bits (257), Expect = 2.910e-20
Identity = 87/302 (28.81%), Postives = 134/302 (44.37%), Query Frame = 1
Query:  205 HSQVARASPATELRLFDANSDAKPMASGEHERKAIVIGAGVVGTCTAYELAKKGYKVVVIDAAAGPGQECSACAAGGMQRSNPLVNRSSWVDVLRASFPSL-FSRGEDGAAGGADRSGSEPYRFFHVQWRSVLADPHFWRWLAGFSYFSL--AQPREQAARQKEMLAFTDWAVDEMAVLMRRH-----GIAERCGYSTRGALQVL-----YDSRAAVRNSDSHYTSKERSTLVSLERALELEPSLA-LQKRLPTYGRF-EPDAAMGNSEVLTRELAAICLTDPTLDVTFRFGLRVVDWVIED 1065
            H    R SP+T L   D +  ++P        +  VIGAGVVG  TAYE+AK+G+ VVV+D+ +    ECS  A GGMQR    ++  SW+   R+  PS  +++  DG              F+H +    L D HF RW   ++   +       + +R  E L FT WA+DEM  +M+        +    G+   GA++ L     Y     +R  D +   +  S +V  E  L+  P +  ++      G   +P AA  N       LA  C  +  L + F++   V  W ++D
Sbjct:   66 HCDKQRGSPSTPL--SDGDGRSRP--------RCYVIGAGVVGVSTAYEVAKQGFDVVVLDSGSREVAECSRAATGGMQRMVMCIDFFSWLKSFRSFLPSPPWAKPPDGLP------------FWHAKPSHTLCDLHFLRWFLTYTLHGMPFGYSVNRKSRFYENLKFTTWAIDEMIEVMKNETGGGCDLENESGFEEGGAMKFLLSKWDYVDHLKMRCWDPYPDDERVSDVVDREELLQAAPWVKFMEDSQKVEGALVQPKAAYANCHWFGEGLARAC--EKRLGIEFKYNCCVTGWSVQD 343          
BLAST of mRNA_P-wetherbeei_contig2074.3.1 vs. uniprot
Match: A0A7S2PT84_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PT84_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.540e-16
Identity = 43/92 (46.74%), Postives = 60/92 (65.22%), Query Frame = 1
Query:  226 SPATELRLFDANSDAKPMASGEHERKAIVIGAGVVGTCTAYELAKKGYKVVVIDAAAGPGQECSACAAGGMQRSNPLVNRSSWVDVLRASFP 501
            SP  EL  F   S  +P A+       I+IG GVVG   AY+LA KG+ VV+++    PG+ECS+CAAGGMQRSNP+V++ +W+ V ++  P
Sbjct:   38 SPTNELISF---SHQQPSAAXXXXXXCIIIGGGVVGVTAAYKLAMKGHSVVLLEPNFAPGKECSSCAAGGMQRSNPVVDKGTWIAVTKSFIP 126          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2074.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3LUH2_9STRA4.390e-5040.15Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S4SH41_9STRA3.980e-4538.85Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4K2X6_9STRA1.250e-3644.58Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A7S0B166_9STRA1.210e-3242.95Hypothetical protein (Fragment) n=2 Tax=Minutocell... [more]
A0A5J4YM11_PORPP1.290e-2734.01D-amino acid dehydrogenase n=1 Tax=Porphyridium pu... [more]
F2UKG3_SALR58.690e-2438.24C3H1-type domain-containing protein n=1 Tax=Salpin... [more]
A0A7S4LBK9_9EUGL5.230e-2337.14Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A0G4H2M6_VITBC3.470e-2129.96DAO domain-containing protein n=1 Tax=Vitrella bra... [more]
A0A0G4FXE8_9ALVE2.910e-2028.81DAO domain-containing protein n=1 Tax=Chromera vel... [more]
A0A7S2PT84_9STRA1.540e-1646.74Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig2074contigP-wetherbeei_contig2074:3733..6044 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog946362.XP_004990500.1
Preferred nameZC3H15
PFAMsDFRP_C,Torus,zf-CCCH
Model size1216
Max annot lvl33154|Opisthokonta
Hectar predicted targeting categorysignal anchor
GOsGO:0000981,GO:0002181,GO:0003674,GO:0003676,GO:0003700,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005829,GO:0006355,GO:0006357,GO:0006403,GO:0006405,GO:0006406,GO:0006412,GO:0006518,GO:0006611,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0007154,GO:0007165,GO:0007166,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0015031,GO:0015833,GO:0015931,GO:0016973,GO:0019219,GO:0019221,GO:0019222,GO:0019538,GO:0023052,GO:0031323,GO:0031326,GO:0031503,GO:0031974,GO:0031981,GO:0033036,GO:0034097,GO:0034613,GO:0034641,GO:0034645,GO:0042221,GO:0042886,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0050896,GO:0051028,GO:0051168,GO:0051169,GO:0051171,GO:0051179,GO:0051234,GO:0051236,GO:0051252,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0065007,GO:0070013,GO:0070727,GO:0070887,GO:0071166,GO:0071310,GO:0071345,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:2000112,GO:2001141
Exons6
Evalue1.42e-24
EggNOG OGsCOG5252@1|root,KOG1763@2759|Eukaryota,38BDX@33154|Opisthokonta
DescriptionZinc finger CCCH domain-containing protein
Cds size1212
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig2074.3.1prot_P-wetherbeei_contig2074.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig2074 3735..6044 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186207.5282478-CDS-P-wetherbeei_contig2074:3734..40141683186207.5282478-CDS-P-wetherbeei_contig2074:3734..4014Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2074 3735..4014 -
1683186207.5371695-CDS-P-wetherbeei_contig2074:4271..44141683186207.5371695-CDS-P-wetherbeei_contig2074:4271..4414Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2074 4272..4414 -
1683186207.545261-CDS-P-wetherbeei_contig2074:4653..49781683186207.545261-CDS-P-wetherbeei_contig2074:4653..4978Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2074 4654..4978 -
1683186207.5533204-CDS-P-wetherbeei_contig2074:5201..52931683186207.5533204-CDS-P-wetherbeei_contig2074:5201..5293Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2074 5202..5293 -
1683186207.561403-CDS-P-wetherbeei_contig2074:5498..57751683186207.561403-CDS-P-wetherbeei_contig2074:5498..5775Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2074 5499..5775 -
1683186207.5695703-CDS-P-wetherbeei_contig2074:5949..60441683186207.5695703-CDS-P-wetherbeei_contig2074:5949..6044Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2074 5950..6044 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig2074.3.1

>prot_P-wetherbeei_contig2074.3.1 ID=prot_P-wetherbeei_contig2074.3.1|Name=mRNA_P-wetherbeei_contig2074.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=404bp
DVSAVSRILELFGEKKRESGGALKPYLLRFRRSAVLSLQMLRRARTFGLA
AGIGTVGAGVAIASIGKRHSQVARASPATELRLFDANSDAKPMASGEHER
KAIVIGAGVVGTCTAYELAKKGYKVVVIDAAAGPGQECSACAAGGMQRSN
PLVNRSSWVDVLRASFPSLFSRGEDGAAGGADRSGSEPYRFFHVQWRSVL
ADPHFWRWLAGFSYFSLAQPREQAARQKEMLAFTDWAVDEMAVLMRRHGI
AERCGYSTRGALQVLYDSRAAVRNSDSHYTSKERSTLVSLERALELEPSL
ALQKRLPTYGRFEPDAAMGNSEVLTRELAAICLTDPTLDVTFRFGLRVVD
WVIEDAAGATEAEGGKGSGGGGGVAGGSASIAPMTAGASSDPAAVAAAIK
NGGG
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mRNA from alignment at P-wetherbeei_contig2074:3733..6044-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig2074.3.1 ID=mRNA_P-wetherbeei_contig2074.3.1|Name=mRNA_P-wetherbeei_contig2074.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2312bp|location=Sequence derived from alignment at P-wetherbeei_contig2074:3733..6044- (Phaeothamnion wetherbeei SAG_119_79)
GACGTTTCCGCCGTTTCAAGGATATTGGAACTCTTTGGAGAAAAGAAGAG AGAGAGCGGCGGCGCGTTGAAGCCTTATTTGCTTCGCTTCCGCAGGTGAG CTTGCTTCTTGACCAGCTCGTTAAGAAAATGCTAGGCTTATTTTCTTCGC TGGTAGGAGGTTGGGTGATCACGAGCCTGGCCTGCGTCATTGCTGCGAAC TGCTACATGCGTCGGCAATCGGCTCTTGCGGCATTTGCATTCTCCACGTT GGATCCTTGCTTCCCACAGGAGCGCGGTTCTTTCGCTTCAAATGCTGCGG CGGGCGCGCACGTTCGGCCTGGCTGCCGGCATTGGGACCGTGGGCGCAGG CGTCGCCATTGCCTCCATCGGCAAGCGGCATTCCCAGGTCGCCAGAGCGA GCCCAGCAACGGAGCTGCGGTTGTTCGACGCCAATAGCGATGCCAAGCCC ATGGCCAGTGGCGAGCATGAGAGGAAAGCCATCGTCATTGGCGCCGGAGT GGTGGGGACGTGCACCGCCTACGAGCTCGCCAAAAAGGGCTACAAGGTGA GGCAAGCAGAAAAAGCGTATTGCTGAGAGTAGTGAGCCAACTGGTTGCGT CCTTATTGGAGACCCCAGGTTCTTATGCCATCAGAAATGGAACGAACAGT ACAGGTTGTGGTCTGCCATATAGCCCTCAACCCTCAAAATGCTGTGGTTG CCACGATACTGCTGTCTGCTCTTTCTGTGCTCTCCGTGTTCAAATGGCCA GGTTGTGGTCATCGACGCGGCGGCAGGGCCCGGCCAGGAGTGCAGCGCGT GTGCGGCCGGAGGTATGCAACGCAGCAATCCTCTGGTGAACAGGCAGGTG CTAGAAATGGTCATGCCCAAAGTCGCTTTTGTTAATTGCTTTTCTTGACA GATGGCAGCACAAGCATCGCGTGGAGGCATTCTCAGGCTAATCAGTCTTT AGAAATTTTTATTCTTTGCAGCGCTCGCCAAAAATCAATATTTTTTTCCC AGTGCTGAGGACTTCTGTGTGTCCCAACATTCGACATCATTACTTCGTCT TTGCTGCTGCCTGCAGATCTTCGTGGGTGGATGTGCTGCGGGCGTCATTC CCGTCCCTCTTTTCCCGCGGAGAAGACGGAGCTGCGGGTGGCGCCGATCG ATCCGGATCGGAGCCGTACCGGTTCTTCCACGTGCAGTGGCGCTCCGTGC TGGCGGACCCGCACTTCTGGCGATGGTTGGCGGGCTTCTCGTATTTCTCG CTGGCACAGCCGCGCGAGCAGGCAGCGCGGCAGAAGGAGATGCTGGCGTT CACTGACTGGGCCGTGGACGAGATGGCAGTGCTGATGCGGCGGCACGGCA TCGCCGAACGCTGCGGCTACAGCACGCGCGGTGCGCTCCAGGTGTGTTTT GTTGCTGCGCTAGGCTTCATTTTTCTGCGTTCACCAGCAGCGTTTTGGAG CGCCGGCCTCTGCTACAATGTTTTGGCTGTAATCGCTTTTAAAGCTGATA AAGCCTGCGTTCCCCGTGGCAGTGATAGCATCCAATTTGTTCAAGCGATC CTCCTTTGCGGCAATCGAACTTCTTTTCTACCACTCTCCTTATCCGTTGG ATGAAATCGGGTTTGTCCGGATTTCCACAGGTGCTGTATGACTCCCGCGC CGCTGTCCGCAACAGCGACAGCCACTACACGAGCAAGGAGCGGTCGACGC TCGTGTCGCTGGAGCGCGCTTTGGAGCTCGAGCCGTCCCTCGCCCTCCAG AAGCGCCTGCCGACCTACGGCAGGTGGGCCAGCTTTGCTGATCTTTCTTG ATTTGTTTTTGGAAACTGGCAGGGATGCCGTTTTCTTCCATAAAGTGCGC AGAGGAGGCGGAGTTGCGGCAACAAACGCTAAAAAAATCGCTGCGTTAAC CGTTACAGCGATTGCGTAGAATTACGCTGAGATGGAGAAGCCGTCATTCC ACCCTAGCCGTGAAAGCGCCAAATCTGATGTAACGCGCAGATGAATCTCT GCTACCGTCATGAAACGATTTCGCCGGCAGGTTTGAGCCGGACGCGGCGA TGGGCAACTCGGAGGTGCTGACGCGCGAGCTGGCGGCCATTTGCCTCACT GACCCGACCCTCGACGTCACCTTCCGCTTTGGCCTCCGCGTTGTCGACTG GGTCATCGAGGATGCGGCGGGCGCGACTGAGGCGGAAGGAGGAAAGGGCA GCGGCGGTGGCGGCGGCGTGGCAGGCGGATCCGCTTCTATTGCACCGATG ACGGCCGGCGCCTCCAGTGACCCAGCCGCCGTCGCCGCCGCAATAAAAAA TGGCGGAGGAGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig2074:3733..6044-

>mRNA_P-wetherbeei_contig2074.3.1 ID=mRNA_P-wetherbeei_contig2074.3.1|Name=mRNA_P-wetherbeei_contig2074.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1212bp|location=Sequence derived from alignment at P-wetherbeei_contig2074:3733..6044- (Phaeothamnion wetherbeei SAG_119_79)
GACGTTTCCGCCGTTTCAAGGATATTGGAACTCTTTGGAGAAAAGAAGAG
AGAGAGCGGCGGCGCGTTGAAGCCTTATTTGCTTCGCTTCCGCAGGAGCG
CGGTTCTTTCGCTTCAAATGCTGCGGCGGGCGCGCACGTTCGGCCTGGCT
GCCGGCATTGGGACCGTGGGCGCAGGCGTCGCCATTGCCTCCATCGGCAA
GCGGCATTCCCAGGTCGCCAGAGCGAGCCCAGCAACGGAGCTGCGGTTGT
TCGACGCCAATAGCGATGCCAAGCCCATGGCCAGTGGCGAGCATGAGAGG
AAAGCCATCGTCATTGGCGCCGGAGTGGTGGGGACGTGCACCGCCTACGA
GCTCGCCAAAAAGGGCTACAAGGTTGTGGTCATCGACGCGGCGGCAGGGC
CCGGCCAGGAGTGCAGCGCGTGTGCGGCCGGAGGTATGCAACGCAGCAAT
CCTCTGGTGAACAGATCTTCGTGGGTGGATGTGCTGCGGGCGTCATTCCC
GTCCCTCTTTTCCCGCGGAGAAGACGGAGCTGCGGGTGGCGCCGATCGAT
CCGGATCGGAGCCGTACCGGTTCTTCCACGTGCAGTGGCGCTCCGTGCTG
GCGGACCCGCACTTCTGGCGATGGTTGGCGGGCTTCTCGTATTTCTCGCT
GGCACAGCCGCGCGAGCAGGCAGCGCGGCAGAAGGAGATGCTGGCGTTCA
CTGACTGGGCCGTGGACGAGATGGCAGTGCTGATGCGGCGGCACGGCATC
GCCGAACGCTGCGGCTACAGCACGCGCGGTGCGCTCCAGGTGCTGTATGA
CTCCCGCGCCGCTGTCCGCAACAGCGACAGCCACTACACGAGCAAGGAGC
GGTCGACGCTCGTGTCGCTGGAGCGCGCTTTGGAGCTCGAGCCGTCCCTC
GCCCTCCAGAAGCGCCTGCCGACCTACGGCAGGTTTGAGCCGGACGCGGC
GATGGGCAACTCGGAGGTGCTGACGCGCGAGCTGGCGGCCATTTGCCTCA
CTGACCCGACCCTCGACGTCACCTTCCGCTTTGGCCTCCGCGTTGTCGAC
TGGGTCATCGAGGATGCGGCGGGCGCGACTGAGGCGGAAGGAGGAAAGGG
CAGCGGCGGTGGCGGCGGCGTGGCAGGCGGATCCGCTTCTATTGCACCGA
TGACGGCCGGCGCCTCCAGTGACCCAGCCGCCGTCGCCGCCGCAATAAAA
AATGGCGGAGGA
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