mRNA_P-wetherbeei_contig2070.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig2070.1.1 vs. uniprot
Match: A0A7S2XYY8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYY8_9STRA) HSP 1 Score: 153 bits (386), Expect = 5.510e-44 Identity = 81/115 (70.43%), Postives = 88/115 (76.52%), Query Frame = 1
Query: 22 QEGGIRPYYQTKIDELELIVRDKTQNLQRLKAQRNELNAKVRLLREELHHLQEPGSYVGEVVKPMGKKK-----------------------CTPNTRVALRNDSYVLHKILPTK 297
++ GI YYQ+K+DELE++VR+KT NLQRLKAQRNELNAKVRLLREELHHLQEPGSYVGEVVKPMGKKK CTPNTRVALRNDSYVLHKILPTK
Sbjct: 36 KDAGIHSYYQSKLDELEIVVREKTNNLQRLKAQRNELNAKVRLLREELHHLQEPGSYVGEVVKPMGKKKVLVKVPPEGKYVVDLDKDIDMNKCTPNTRVALRNDSYVLHKILPTK 150
BLAST of mRNA_P-wetherbeei_contig2070.1.1 vs. uniprot
Match: A0A6H5JD34_9PHAE (AAA domain-containing protein n=3 Tax=PX clade TaxID=569578 RepID=A0A6H5JD34_9PHAE) HSP 1 Score: 150 bits (379), Expect = 9.080e-42 Identity = 82/122 (67.21%), Postives = 90/122 (73.77%), Query Frame = 1
Query: 1 MPADAPGQEGGIRPYYQTKIDELELIVRDKTQNLQRLKAQRNELNAKVRLLREELHHLQEPGSYVGEVVKPMGKKK-----------------------CTPNTRVALRNDSYVLHKILPTK 297
M A + G++ G+ YYQ KIDE+EL+VRD+TQNL+RLKAQRNELNAKVRLLREELHHLQE GSYVGEVVK MGKKK CTPNTRVALRNDSYVLHKILPTK
Sbjct: 25 MAAASSGRDLGVHSYYQGKIDEMELVVRDRTQNLERLKAQRNELNAKVRLLREELHHLQESGSYVGEVVKAMGKKKVLVKVNPEGKYVVDIDKDIDVNKCTPNTRVALRNDSYVLHKILPTK 146
BLAST of mRNA_P-wetherbeei_contig2070.1.1 vs. uniprot
Match: A0A6V1RDP8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RDP8_HETAK) HSP 1 Score: 146 bits (369), Expect = 2.420e-40 Identity = 80/122 (65.57%), Postives = 88/122 (72.13%), Query Frame = 1
Query: 1 MPADAPGQEGGIRPYYQTKIDELELIVRDKTQNLQRLKAQRNELNAKVRLLREELHHLQEPGSYVGEVVKPMGK-----------------------KKCTPNTRVALRNDSYVLHKILPTK 297
M D +E GI+ YYQ+KIDELE+ +R+KT NLQRL+AQRNELNAKVRLLREEL+HLQEPGSYVGEVVK MGK KCTPNTRVALRNDSYVLHKILPTK
Sbjct: 15 MEVDGEKEEVGIQTYYQSKIDELEITIREKTNNLQRLQAQRNELNAKVRLLREELYHLQEPGSYVGEVVKAMGKDKVLVKVNPEGKYVVDIDKDIDINKCTPNTRVALRNDSYVLHKILPTK 136
BLAST of mRNA_P-wetherbeei_contig2070.1.1 vs. uniprot
Match: A0A4D9CPY1_9STRA (AAA domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CPY1_9STRA) HSP 1 Score: 146 bits (368), Expect = 3.160e-40 Identity = 78/116 (67.24%), Postives = 86/116 (74.14%), Query Frame = 1
Query: 19 GQEGGIRPYYQTKIDELELIVRDKTQNLQRLKAQRNELNAKVRLLREELHHLQEPGSYVGEVVKPMGK-----------------------KKCTPNTRVALRNDSYVLHKILPTK 297
G++ G+R YY +KIDELE++VR++TQNLQRLKAQRNE NAKVRLLREELHHLQEPGSYVGEVVK MGK KCTPNTRVALRNDSY LHKILPTK
Sbjct: 18 GEDKGVRSYYLSKIDELEVVVRERTQNLQRLKAQRNEWNAKVRLLREELHHLQEPGSYVGEVVKAMGKTKVLVKVNPEGKYVVDLDKDVDINKCTPNTRVALRNDSYTLHKILPTK 133
BLAST of mRNA_P-wetherbeei_contig2070.1.1 vs. uniprot
Match: A0A7S2W1P0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W1P0_9STRA) HSP 1 Score: 143 bits (360), Expect = 4.040e-39 Identity = 78/119 (65.55%), Postives = 84/119 (70.59%), Query Frame = 1
Query: 10 DAPGQEGGIRPYYQTKIDELELIVRDKTQNLQRLKAQRNELNAKVRLLREELHHLQEPGSYVGEVVKPMGK-----------------------KKCTPNTRVALRNDSYVLHKILPTK 297
D G+ G++ YYQ+KIDELELIVRDK +NL RL AQRNELNA+VRLLREELHHLQEPGSYVGEVVK MGK KC PNTRVALRNDSY LHKILPTK
Sbjct: 6 DKAGEAAGLQSYYQSKIDELELIVRDKAKNLARLTAQRNELNARVRLLREELHHLQEPGSYVGEVVKAMGKTKVLVKVNPEGKYVVDLDKDIDINKCLPNTRVALRNDSYALHKILPTK 124
BLAST of mRNA_P-wetherbeei_contig2070.1.1 vs. uniprot
Match: A0A7S2CFJ7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CFJ7_9STRA) HSP 1 Score: 137 bits (345), Expect = 8.420e-37 Identity = 74/119 (62.18%), Postives = 84/119 (70.59%), Query Frame = 1
Query: 10 DAPGQEGGIRPYYQTKIDELELIVRDKTQNLQRLKAQRNELNAKVRLLREELHHLQEPGSYVGEVVKPMGKKK-----------------------CTPNTRVALRNDSYVLHKILPTK 297
D +E G+ +YQ+KIDELE++ R+K QNL R+ AQRNELNA+VRLLREELH+LQEPGSYVGEVVKPMGK K CTPNTRVALRNDSY LHKILPTK
Sbjct: 21 DVQEKEIGLNSFYQSKIDELEIVAREKVQNLARITAQRNELNARVRLLREELHYLQEPGSYVGEVVKPMGKTKILVKVNPEGKYVVDLGAGIDMAKCTPNTRVALRNDSYSLHKILPTK 139
BLAST of mRNA_P-wetherbeei_contig2070.1.1 vs. uniprot
Match: F0J986_AMBVA (26S proteasome regulatory complex ATPase RPT6 (Fragment) n=1 Tax=Amblyomma variegatum TaxID=34610 RepID=F0J986_AMBVA) HSP 1 Score: 132 bits (331), Expect = 1.670e-36 Identity = 74/122 (60.66%), Postives = 84/122 (68.85%), Query Frame = 1
Query: 1 MPADAPGQEGGIRPYYQTKIDELELIVRDKTQNLQRLKAQRNELNAKVRLLREELHHLQEPGSYVGEVVKPMGKKKC-----------------------TPNTRVALRNDSYVLHKILPTK 297
M DAP + G++ YY TKI+EL+L+V DKTQNL+RL+AQRNELNAKVR+LREEL LQE GSYVGEVVKPM KKK TPN+RVALRNDSY LHKILP K
Sbjct: 15 MEVDAPSKGDGLKQYYITKIEELQLVVSDKTQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDIANVTPNSRVALRNDSYTLHKILPNK 136
BLAST of mRNA_P-wetherbeei_contig2070.1.1 vs. uniprot
Match: A0A7S3M6Y9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M6Y9_9STRA) HSP 1 Score: 126 bits (317), Expect = 2.120e-35 Identity = 68/112 (60.71%), Postives = 79/112 (70.54%), Query Frame = 1
Query: 31 GIRPYYQTKIDELELIVRDKTQNLQRLKAQRNELNAKVRLLREELHHLQEPGSYVGEVVKPMGK-----------------------KKCTPNTRVALRNDSYVLHKILPTK 297
G++ YY +KI+EL++ +RDKTQN +RLKAQRNELN KVRL+REEL L EPGSYVGEVVKPMGK KCTPNTRVAL++DSY LHKILPTK
Sbjct: 14 GLKSYYISKIEELQIKIRDKTQNFERLKAQRNELNNKVRLMREELTQLHEPGSYVGEVVKPMGKLKVLVKINPDGKFVVDLDKDIDINKCTPNTRVALKSDSYTLHKILPTK 125
BLAST of mRNA_P-wetherbeei_contig2070.1.1 vs. uniprot
Match: A0A2K6UWV2_SAIBB (Proteasome 26S subunit, ATPase 5 n=5 Tax=Euteleostomi TaxID=117571 RepID=A0A2K6UWV2_SAIBB) HSP 1 Score: 127 bits (318), Expect = 3.290e-35 Identity = 69/93 (74.19%), Postives = 77/93 (82.80%), Query Frame = 1
Query: 31 GIRPYYQTKIDELELIVRDKTQNLQRLKAQRNELNAKVRLLREELHHLQEPGSYVGEVVKPMGKKKC----TPNTRVALRNDSYVLHKILPTK 297
G+R YY +KI+EL+LIV DK+QNL+RL+AQRNELNAKVRLLREEL LQE GSYVGEVV+ M KKK TPN RVALRNDSY LHKILP K
Sbjct: 19 GLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVTPNCRVALRNDSYTLHKILPNK 111
BLAST of mRNA_P-wetherbeei_contig2070.1.1 vs. uniprot
Match: J3QSE0_HUMAN (26S proteasome regulatory subunit 8 n=16 Tax=Euteleostomi TaxID=117571 RepID=J3QSE0_HUMAN) HSP 1 Score: 127 bits (318), Expect = 3.290e-35 Identity = 69/93 (74.19%), Postives = 77/93 (82.80%), Query Frame = 1
Query: 31 GIRPYYQTKIDELELIVRDKTQNLQRLKAQRNELNAKVRLLREELHHLQEPGSYVGEVVKPMGKKKC----TPNTRVALRNDSYVLHKILPTK 297
G+R YY +KI+EL+LIV DK+QNL+RL+AQRNELNAKVRLLREEL LQE GSYVGEVV+ M KKK TPN RVALRNDSY LHKILP K
Sbjct: 19 GLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVTPNCRVALRNDSYTLHKILPNK 111 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2070.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig2070.1.1 >prot_P-wetherbeei_contig2070.1.1 ID=prot_P-wetherbeei_contig2070.1.1|Name=mRNA_P-wetherbeei_contig2070.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=99bp MPADAPGQEGGIRPYYQTKIDELELIVRDKTQNLQRLKAQRNELNAKVRLback to top mRNA from alignment at P-wetherbeei_contig2070:494..1295- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig2070.1.1 ID=mRNA_P-wetherbeei_contig2070.1.1|Name=mRNA_P-wetherbeei_contig2070.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=802bp|location=Sequence derived from alignment at P-wetherbeei_contig2070:494..1295- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig2070:494..1295- >mRNA_P-wetherbeei_contig2070.1.1 ID=mRNA_P-wetherbeei_contig2070.1.1|Name=mRNA_P-wetherbeei_contig2070.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=297bp|location=Sequence derived from alignment at P-wetherbeei_contig2070:494..1295- (Phaeothamnion wetherbeei SAG_119_79)back to top |