mRNA_P-wetherbeei_contig2065.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig2065.5.1
Unique NamemRNA_P-wetherbeei_contig2065.5.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig2065.5.1 vs. uniprot
Match: A0A2T7T3D1_9BURK (SDR family oxidoreductase n=3 Tax=unclassified Limnohabitans TaxID=2626134 RepID=A0A2T7T3D1_9BURK)

HSP 1 Score: 402 bits (1034), Expect = 3.400e-140
Identity = 205/252 (81.35%), Postives = 230/252 (91.27%), Query Frame = 1
Query:    1 MAQSLKGKVAWITGGGSGIGLAGAIELVKAGAHVVISGRTKATNDSALAELKALGSAEAILLDVADKKAVKAAADAILAKHGRIDILVTSAGTNATRRNFDVVTAEAWDDVVAINLSGLFYCVHAVLPAMRKQRDGLIINVSSWAGRFASKLTGPAYNATKRAVIALTESINMEECVNGIRATSVLPGEVATPILRKRPVPPSKEEQDRMTQSEDLGAAILFVASMPARTCVNELIIAPTWNRFYVGGLEVP 756
            M  SLKG+VAWITGGGSGIGLAGAIELVKAGAHVVISGRT ATN  ALA+L+ LGSAEA+LLDVADK AVKA A  I+A+HGRID+L+TSAGTNAT+RNFDVVT EAWDDVVAINLSGLFYCVHAVLP MR+Q+ GLIINVSSWAG +ASKLTGPAYNATKRAV+ALTESINMEEC+ GIRATS+LPGEVATPIL KRPVPPS ++++RM Q+ED+G AILF+A MPARTC+NELII+PT+NRFY GGLE P
Sbjct:    1 MTTSLKGQVAWITGGGSGIGLAGAIELVKAGAHVVISGRTAATNAMALAQLQNLGSAEAVLLDVADKHAVKATAQDIVARHGRIDMLITSAGTNATQRNFDVVTPEAWDDVVAINLSGLFYCVHAVLPTMRQQQGGLIINVSSWAGLYASKLTGPAYNATKRAVLALTESINMEECLYGIRATSLLPGEVATPILDKRPVPPSAQQRERMVQAEDMGQAILFLAQMPARTCINELIISPTFNRFYTGGLETP 252          
BLAST of mRNA_P-wetherbeei_contig2065.5.1 vs. uniprot
Match: A0A0P0M9J6_9BURK (Putative oxidoreductase n=11 Tax=Comamonadaceae TaxID=80864 RepID=A0A0P0M9J6_9BURK)

HSP 1 Score: 395 bits (1016), Expect = 1.870e-137
Identity = 203/254 (79.92%), Postives = 226/254 (88.98%), Query Frame = 1
Query:    1 MAQSLKGKVAWITGGGSGIGLAGAIELVKAGAHVVISGRTKATNDSALAELKALGSAEAILLDVADKKAVKAAADAILAKHGRIDILVTSAGTNATRRNFDVVTAEAWDDVVAINLSGLFYCVHAVLPAMRKQRDGLIINVSSWAGRFASKLTGPAYNATKRAVIALTESINMEECVNGIRATSVLPGEVATPILRKRPVPPSKEEQDRMTQSEDLGAAILFVASMPARTCVNELIIAPTWNRFYVGGLEVPKK 762
            M  SLKG++AWITGGGSGIGLAGA+ L +AGAHVVISGR  ATN S LA L+ +GSA+A+LLDVADK AVKAA   IL +HGRIDILVTSAGTNAT+RNFDVVT EAWDDVVAINLSGLFYCVHAVLPAMR+Q+ GLIINVSSWAG +ASKLTGPAYNATKRAV+ALTESINMEEC NGIRATS+LPGEVATPIL KRPVPPS E+++ M Q+ED+G AILFVA MPARTC+NELII+PT+NRFY GGLE P K
Sbjct:    1 MNPSLKGQIAWITGGGSGIGLAGAMALAQAGAHVVISGRNAATNTSTLAALQTVGSAQALLLDVADKHAVKAAVQQILDQHGRIDILVTSAGTNATQRNFDVVTPEAWDDVVAINLSGLFYCVHAVLPAMRQQQGGLIINVSSWAGLYASKLTGPAYNATKRAVLALTESINMEECTNGIRATSLLPGEVATPILDKRPVPPSAEQRELMVQAEDMGQAILFVAQMPARTCINELIISPTFNRFYTGGLESPPK 254          
BLAST of mRNA_P-wetherbeei_contig2065.5.1 vs. uniprot
Match: A0A4P5TYR2_9BURK (Oxidoreductase n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A4P5TYR2_9BURK)

HSP 1 Score: 390 bits (1002), Expect = 2.530e-135
Identity = 196/253 (77.47%), Postives = 227/253 (89.72%), Query Frame = 1
Query:    1 MAQSLKGKVAWITGGGSGIGLAGAIELVKAGAHVVISGRTKATNDSALAELKALGSAEAILLDVADKKAVKAAADAILAKHGRIDILVTSAGTNATRRNFDVVTAEAWDDVVAINLSGLFYCVHAVLPAMRKQRDGLIINVSSWAGRFASKLTGPAYNATKRAVIALTESINMEECVNGIRATSVLPGEVATPILRKRPVPPSKEEQDRMTQSEDLGAAILFVASMPARTCVNELIIAPTWNRFYVGGLEVPK 759
            M   LKG+VAW+TGGGSGIGLAGAIELVKAGAHV+ISGRT ATN SALA L+ALGSAEA+LLDVADK+AVKA A  ++A  GRID+L+ SAGTNAT+RNF+V+T EAWD+VVAINLSGLFYCVHAVLP MR+Q+ GLIINVSSWAG +AS LTGPAYNATKRAV+ALTESINMEEC NGIRA+S+LPGEVATPIL KRPVPPS+ +++RM Q+ED+G AILF+A MP RTC+NEL+I+PT NRFY+GGLE PK
Sbjct:    1 MNTDLKGQVAWVTGGGSGIGLAGAIELVKAGAHVLISGRTAATNASALATLQALGSAEAVLLDVADKQAVKAVAQQLVATRGRIDLLINSAGTNATQRNFNVLTTEAWDEVVAINLSGLFYCVHAVLPTMRQQQGGLIINVSSWAGLYASTLTGPAYNATKRAVLALTESINMEECTNGIRASSLLPGEVATPILNKRPVPPSQAQRERMVQAEDMGQAILFLAQMPPRTCINELVISPTHNRFYMGGLETPK 253          
BLAST of mRNA_P-wetherbeei_contig2065.5.1 vs. uniprot
Match: UPI0019B0BA1B (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI0019B0BA1B)

HSP 1 Score: 388 bits (996), Expect = 2.150e-134
Identity = 199/255 (78.04%), Postives = 223/255 (87.45%), Query Frame = 1
Query:    1 MAQSLKGKVAWITGGGSGIGLAGAIELVKAGAHVVISGRTKATNDSALAELKALGSAEAILLDVADKKAVKAAADAILAKHGRIDILVTSAGTNAT--RRNFDVVTAEAWDDVVAINLSGLFYCVHAVLPAMRKQRDGLIINVSSWAGRFASKLTGPAYNATKRAVIALTESINMEECVNGIRATSVLPGEVATPILRKRPVPPSKEEQDRMTQSEDLGAAILFVASMPARTCVNELIIAPTWNRFYVGGLEVPK 759
            ++  L+GKVAWITGGGSGIGLAGA ELVKAGA VV+SGRT+ TN  A  +LKALG AEAILLDVADKKAV AAA  I  +HGRIDILVTSAGTN +  RRNF  VTAE WDDVVAINL+GLFYC HAV+P MR+++DGLIIN+SSWAGR+AS LTGPAYNATKRAVIA++ESINMEEC NGIRATS+LPGEVATPIL KRPVPPSKEE+ RM Q ED G AILFVA+MPAR+C+NEL+IAPTWNRFY+GGLE PK
Sbjct:    2 LSAELRGKVAWITGGGSGIGLAGAEELVKAGARVVVSGRTEKTNREAEKKLKALGDAEAILLDVADKKAVAAAAADIEKRHGRIDILVTSAGTNISGDRRNFKNVTAEGWDDVVAINLNGLFYCCHAVIPGMRRRKDGLIINISSWAGRYASSLTGPAYNATKRAVIAISESINMEECANGIRATSILPGEVATPILEKRPVPPSKEERARMAQPEDFGKAILFVATMPARSCINELVIAPTWNRFYLGGLEAPK 256          
BLAST of mRNA_P-wetherbeei_contig2065.5.1 vs. uniprot
Match: A0A2M6VAD4_9BURK (Oxidoreductase n=2 Tax=unclassified Limnohabitans TaxID=2626134 RepID=A0A2M6VAD4_9BURK)

HSP 1 Score: 385 bits (988), Expect = 3.820e-133
Identity = 200/252 (79.37%), Postives = 225/252 (89.29%), Query Frame = 1
Query:    1 MAQSLKGKVAWITGGGSGIGLAGAIELVKAGAHVVISGRTKATNDSALAELKALGSAEAILLDVADKKAVKAAADAILAKHGRIDILVTSAGTNATRRNFDVVTAEAWDDVVAINLSGLFYCVHAVLPAMRKQRDGLIINVSSWAGRFASKLTGPAYNATKRAVIALTESINMEECVNGIRATSVLPGEVATPILRKRPVPPSKEEQDRMTQSEDLGAAILFVASMPARTCVNELIIAPTWNRFYVGGLEVP 756
            M+ SLKG+VAW+TGGGSGIGLAGAIELVKAGAHVVISGR  A+N S LA L+ALGSA+ I LDVADK AVKAAAD ILA+HG IDILV SAGTNAT+RNFDVV+ + WD+VVAINLSG FY VHAVLP+MR +  GLIINVSSWAG +ASKLTGPAYNATKRAVIALTESINMEE  NGIRA+SVLPGEVATPIL KRPVPPS+E++DRM Q+ED+G AILF+A MPARTC+NELII+PT+NRFY+GGLE P
Sbjct:    1 MSNSLKGQVAWVTGGGSGIGLAGAIELVKAGAHVVISGRNAASNASGLAVLQALGSAQGIELDVADKHAVKAAADQILAQHGHIDILVNSAGTNATKRNFDVVSVDDWDNVVAINLSGSFYTVHAVLPSMRARGGGLIINVSSWAGLYASKLTGPAYNATKRAVIALTESINMEEGGNGIRASSVLPGEVATPILNKRPVPPSQEQRDRMVQAEDMGQAILFLAQMPARTCINELIISPTFNRFYMGGLETP 252          
BLAST of mRNA_P-wetherbeei_contig2065.5.1 vs. uniprot
Match: V4XX63_9PROT (Putative oxidoreductase n=1 Tax=Betaproteobacteria bacterium MOLA814 TaxID=1408164 RepID=V4XX63_9PROT)

HSP 1 Score: 376 bits (965), Expect = 1.130e-129
Identity = 196/254 (77.17%), Postives = 220/254 (86.61%), Query Frame = 1
Query:    1 MAQSLKGKVAWITGGGSGIGLAGAIELVKAGAHVVISGRTKATNDSALAELKALGSAEAILLDVADKKAVKAAADAILAKHGRIDILVTSAGTNATRRNFDVVTAEAWDDVVAINLSGLFYCVHAVLPAMRKQRDGLIINVSSWAGRFASKLTGPAYNATKRAVIALTESINMEECVNGIRATSVLPGEVATPILRKRPVPPSKEEQDRMTQSEDLGAAILFVASMPARTCVNELIIAPTWNRFYVGGLEVPKK 762
            M  SL+G+VAW+TGGGSGIGLA A  LVKAGAHVVISGR   TN +ALA L+ALGSAEA LLDVADK AVKAAAD++LA H RIDILV SAGTNAT+RNFDV+T +AWDDVVAINLSG FYCVHAVLPAMR Q  GLIINVSSWAG +ASKLTGPAYNATKRAV+ALTESINMEEC +GIRA+SVLPGEVATPI+ KRPVPP++E  D M Q ED+GAAI F+A MPAR+C+NEL+I+PT NRFY+GG E P K
Sbjct:    1 MQTSLQGQVAWVTGGGSGIGLAAATALVKAGAHVVISGRNAQTNATALATLQALGSAEAQLLDVADKHAVKAAADSLLAMHKRIDILVNSAGTNATKRNFDVLTTDAWDDVVAINLSGSFYCVHAVLPAMRAQGGGLIINVSSWAGLYASKLTGPAYNATKRAVLALTESINMEECGHGIRASSVLPGEVATPIMLKRPVPPAQELLDLMVQVEDMGAAIGFIAQMPARSCINELVISPTHNRFYLGGFESPPK 254          
BLAST of mRNA_P-wetherbeei_contig2065.5.1 vs. uniprot
Match: A0A1F4E2E7_9PROT (Oxidoreductase n=5 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4E2E7_9PROT)

HSP 1 Score: 361 bits (927), Expect = 7.100e-124
Identity = 188/254 (74.02%), Postives = 207/254 (81.50%), Query Frame = 1
Query:    4 AQSLKGKVAWITGGGSGIGLAGAIELVKAGAHVVISGRTKATNDSALAELKALGSAEAILLDVADKKAVKAAADAILAKHGRIDILVTSAGTN--ATRRNFDVVTAEAWDDVVAINLSGLFYCVHAVLPAMRKQRDGLIINVSSWAGRFASKLTGPAYNATKRAVIALTESINMEECVNGIRATSVLPGEVATPILRKRPVPPSKEEQDRMTQSEDLGAAILFVASMPARTCVNELIIAPTWNRFYVGGLEVPK 759
            +  L GKVAWITGGGSGI       L  AG HVVISGRT  TN+ AL+E++  GSAEAILLDV DKKAV A A  I  +HGRIDILV SAGTN    +RN   +T E WD+VVA NLSGLFYC HAV+P MR +RDGL+INVSSWAGR+AS+LTGPAYNATKRAVIA+TESINMEEC NGIRATS+LPGEVATPIL KRPVPPS EE+ RM Q EDLGAAILFVAS+PARTCVNELII+PTWNRFY GGLE PK
Sbjct:    3 STDLAGKVAWITGGGSGIXXXXXXXLANAGVHVVISGRTARTNEQALSEIQRRGSAEAILLDVCDKKAVAATAAEIERRHGRIDILVNSAGTNIGGGKRNLATMTLEGWDEVVAANLSGLFYCCHAVIPGMRARRDGLVINVSSWAGRYASQLTGPAYNATKRAVIAVTESINMEECRNGIRATSILPGEVATPILEKRPVPPSPEERARMAQPEDLGAAILFVASLPARTCVNELIISPTWNRFYTGGLETPK 256          
BLAST of mRNA_P-wetherbeei_contig2065.5.1 vs. uniprot
Match: A0A1F4AUQ2_9PROT (Oxidoreductase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4AUQ2_9PROT)

HSP 1 Score: 361 bits (926), Expect = 9.070e-124
Identity = 184/248 (74.19%), Postives = 214/248 (86.29%), Query Frame = 1
Query:   13 LKGKVAWITGGGSGIGLAGAIELVKAGAHVVISGRTKATNDSALAELKALGSAEAILLDVADKKAVKAAADAILAKHGRIDILVTSAGTN--ATRRNFDVVTAEAWDDVVAINLSGLFYCVHAVLPAMRKQRDGLIINVSSWAGRFASKLTGPAYNATKRAVIALTESINMEECVNGIRATSVLPGEVATPILRKRPVPPSKEEQDRMTQSEDLGAAILFVASMPARTCVNELIIAPTWNRFYVGGLE 750
            L+G+VAW+TGGGSGIGLAGA+EL K+GA VVISGRT  +N+  LA+LK LG AEA+ LDVAD+KAV AAA  I  ++GRIDILV SAGTN    +RNF  +T E WD+VVAINL+GLFYC +AVLP MR +RDGLIIN++SWAGR+AS+LTGPAYNATKRAVIA++ESINMEEC +GIRATS+LPGEVATPIL KRPVPPS EE+ RM Q+EDLGAAILFVAS+PAR CVNELI+ PTWNRFY GGLE
Sbjct:    6 LRGRVAWVTGGGSGIGLAGAMELAKSGARVVISGRTARSNEEGLAQLKKLGEAEALRLDVADRKAVMAAAADIEKRYGRIDILVNSAGTNIGGGKRNFATMTTEGWDEVVAINLNGLFYCCYAVLPGMRARRDGLIINIASWAGRYASQLTGPAYNATKRAVIAVSESINMEECKHGIRATSILPGEVATPILEKRPVPPSAEERARMAQAEDLGAAILFVASLPARACVNELILTPTWNRFYTGGLE 253          
BLAST of mRNA_P-wetherbeei_contig2065.5.1 vs. uniprot
Match: UPI000C31BC54 (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Macromonas sp. BK-30 TaxID=1843082 RepID=UPI000C31BC54)

HSP 1 Score: 358 bits (920), Expect = 8.250e-123
Identity = 185/252 (73.41%), Postives = 211/252 (83.73%), Query Frame = 1
Query:    1 MAQSLKGKVAWITGGGSGIGLAGAIELVKAGAHVVISGRTKATNDSALAELKALGSAEAILLDVADKKAVKAAADAILAKHGRIDILVTSAGTNATRRNFDVVTAEAWDDVVAINLSGLFYCVHAVLPAMRKQRDGLIINVSSWAGRFASKLTGPAYNATKRAVIALTESINMEECVNGIRATSVLPGEVATPILRKRPVPPSKEEQDRMTQSEDLGAAILFVASMPARTCVNELIIAPTWNRFYVGGLEVP 756
            M  SL G+VAW+TGGGS           +AGAHV ISGR  ATN SALA L+A+GSAEA+LLDVAD  AV  AA+ +LA+HGRIDILV SAGTNAT+RNFDV+T  AWDDVVAINLSGLFYCVHAVLP MR++  GLI+NVSSWAG +ASKLTGPAYNATKRAV+ALTESINMEE V+GIRA+SVLPGEVATPIL KRPVPPS +E+ RM Q+EDLG A+LF+A MPARTC+NEL+I+PT NRFY GGLE P
Sbjct:    1 MDTSLSGQVAWVTGGGSXXXXXXXXXXXRAGAHVAISGRNPATNASALAALQAVGSAEALLLDVADSAAVHRAAEQLLARHGRIDILVNSAGTNATQRNFDVLTTAAWDDVVAINLSGLFYCVHAVLPGMRQRGGGLIVNVSSWAGLYASKLTGPAYNATKRAVLALTESINMEEGVHGIRASSVLPGEVATPILDKRPVPPSADERARMVQAEDLGQAVLFLAQMPARTCINELVISPTHNRFYTGGLETP 252          
BLAST of mRNA_P-wetherbeei_contig2065.5.1 vs. uniprot
Match: A0A1F3YFA8_9PROT (Oxidoreductase n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3YFA8_9PROT)

HSP 1 Score: 358 bits (918), Expect = 1.500e-122
Identity = 181/252 (71.83%), Postives = 212/252 (84.13%), Query Frame = 1
Query:   10 SLKGKVAWITGGGSGIGLAGAIELVKAGAHVVISGRTKATNDSALAELKALGSAEAILLDVADKKAVKAAADAILAKHGRIDILVTSAGTNAT--RRNFDVVTAEAWDDVVAINLSGLFYCVHAVLPAMRKQRDGLIINVSSWAGRFASKLTGPAYNATKRAVIALTESINMEECVNGIRATSVLPGEVATPILRKRPVPPSKEEQDRMTQSEDLGAAILFVASMPARTCVNELIIAPTWNRFYVGGLEVPK 759
            +L GKVAWITGGGSGIGLAGA+EL KAGAHVVISGRT +TN+ AL+EL   GSAEA LLDV+DK+AV A    I  +HGRIDILV SAG N +  +R+F  +  E WD+VVA+NL+GLFYC HAVLP MR+++DGLI+N+SSW GR+A+KL GPAYNATKRAVIA++ESINMEE  +GIRATS+LPGEVATP+L KRP+PPS EE+ RM Q ED G AILFVA+MPARTCVNEL+IAPTWNRFY GGLE PK
Sbjct:    3 NLSGKVAWITGGGSGIGLAGALELAKAGAHVVISGRTASTNEQALSELNKSGSAEATLLDVSDKRAVVATVADIEKRHGRIDILVNSAGINISGAKRDFATMATEGWDEVVAVNLNGLFYCCHAVLPGMRRRKDGLIVNISSWFGRYANKLGGPAYNATKRAVIAISESINMEEFAHGIRATSILPGEVATPLLEKRPLPPSTEERARMAQPEDFGKAILFVATMPARTCVNELVIAPTWNRFYPGGLEAPK 254          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2065.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2T7T3D1_9BURK3.400e-14081.35SDR family oxidoreductase n=3 Tax=unclassified Lim... [more]
A0A0P0M9J6_9BURK1.870e-13779.92Putative oxidoreductase n=11 Tax=Comamonadaceae Ta... [more]
A0A4P5TYR2_9BURK2.530e-13577.47Oxidoreductase n=1 Tax=Comamonadaceae bacterium Ta... [more]
UPI0019B0BA1B2.150e-13478.04SDR family NAD(P)-dependent oxidoreductase n=1 Tax... [more]
A0A2M6VAD4_9BURK3.820e-13379.37Oxidoreductase n=2 Tax=unclassified Limnohabitans ... [more]
V4XX63_9PROT1.130e-12977.17Putative oxidoreductase n=1 Tax=Betaproteobacteria... [more]
A0A1F4E2E7_9PROT7.100e-12474.02Oxidoreductase n=5 Tax=unclassified Betaproteobact... [more]
A0A1F4AUQ2_9PROT9.070e-12474.19Oxidoreductase n=1 Tax=Betaproteobacteria bacteriu... [more]
UPI000C31BC548.250e-12373.41SDR family NAD(P)-dependent oxidoreductase n=1 Tax... [more]
A0A1F3YFA8_9PROT1.500e-12271.83Oxidoreductase n=1 Tax=Betaproteobacteria bacteriu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig2065contigP-wetherbeei_contig2065:4897..5661 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1100720.ALKN01000045_gene433
PFAMsadh_short
Model size765
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.57e-141
EggNOG OGsCOG4221@1|root,COG4221@2|Bacteria,1MWXS@1224|Proteobacteria,2VHSZ@28216|Betaproteobacteria
DescriptionBelongs to the short-chain dehydrogenases reductases (SDR) family
Cds size765
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186205.5411432-CDS-P-wetherbeei_contig2065:4896..56611683186205.5411432-CDS-P-wetherbeei_contig2065:4896..5661Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2065 4897..5661 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig2065.5.1prot_P-wetherbeei_contig2065.5.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig2065 4897..5661 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig2065.5.1

>prot_P-wetherbeei_contig2065.5.1 ID=prot_P-wetherbeei_contig2065.5.1|Name=mRNA_P-wetherbeei_contig2065.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=255bp
MAQSLKGKVAWITGGGSGIGLAGAIELVKAGAHVVISGRTKATNDSALAE
LKALGSAEAILLDVADKKAVKAAADAILAKHGRIDILVTSAGTNATRRNF
DVVTAEAWDDVVAINLSGLFYCVHAVLPAMRKQRDGLIINVSSWAGRFAS
KLTGPAYNATKRAVIALTESINMEECVNGIRATSVLPGEVATPILRKRPV
PPSKEEQDRMTQSEDLGAAILFVASMPARTCVNELIIAPTWNRFYVGGLE
VPKK*
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mRNA from alignment at P-wetherbeei_contig2065:4897..5661+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig2065.5.1 ID=mRNA_P-wetherbeei_contig2065.5.1|Name=mRNA_P-wetherbeei_contig2065.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=765bp|location=Sequence derived from alignment at P-wetherbeei_contig2065:4897..5661+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCCAGTCCCTCAAAGGCAAGGTCGCCTGGATCACCGGTGGCGGCAG CGGCATCGGCCTCGCCGGCGCCATCGAGCTGGTGAAGGCCGGCGCGCACG TCGTGATCTCGGGCCGCACCAAGGCGACCAACGACAGTGCGCTGGCGGAG CTCAAGGCCCTGGGCAGCGCCGAGGCGATCCTGCTCGACGTGGCGGACAA GAAGGCCGTCAAGGCCGCGGCCGATGCGATCCTCGCGAAGCACGGCCGCA TCGACATCCTAGTGACCAGCGCAGGGACGAACGCCACCAGGCGCAATTTC GACGTGGTCACGGCCGAGGCCTGGGACGACGTGGTGGCGATCAACCTTTC GGGCCTGTTCTACTGCGTGCATGCCGTGCTGCCGGCCATGAGAAAGCAAC GAGACGGCCTGATCATCAACGTGTCTTCGTGGGCCGGGCGGTTCGCTTCC AAGCTCACGGGTCCGGCTTACAACGCGACCAAGCGCGCGGTGATTGCGCT CACCGAGTCGATCAACATGGAGGAGTGCGTGAACGGCATCCGCGCAACCT CCGTCCTGCCCGGCGAGGTGGCCACGCCCATCCTTCGCAAACGCCCCGTG CCGCCGTCGAAGGAGGAGCAGGACCGGATGACGCAGTCGGAGGACCTGGG TGCGGCGATCCTGTTCGTCGCGTCCATGCCTGCGCGCACCTGCGTGAACG AGTTGATCATCGCGCCGACCTGGAACCGCTTCTACGTCGGCGGCCTCGAG GTTCCCAAGAAATAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig2065:4897..5661+

>mRNA_P-wetherbeei_contig2065.5.1 ID=mRNA_P-wetherbeei_contig2065.5.1|Name=mRNA_P-wetherbeei_contig2065.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=765bp|location=Sequence derived from alignment at P-wetherbeei_contig2065:4897..5661+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCCAGTCCCTCAAAGGCAAGGTCGCCTGGATCACCGGTGGCGGCAG
CGGCATCGGCCTCGCCGGCGCCATCGAGCTGGTGAAGGCCGGCGCGCACG
TCGTGATCTCGGGCCGCACCAAGGCGACCAACGACAGTGCGCTGGCGGAG
CTCAAGGCCCTGGGCAGCGCCGAGGCGATCCTGCTCGACGTGGCGGACAA
GAAGGCCGTCAAGGCCGCGGCCGATGCGATCCTCGCGAAGCACGGCCGCA
TCGACATCCTAGTGACCAGCGCAGGGACGAACGCCACCAGGCGCAATTTC
GACGTGGTCACGGCCGAGGCCTGGGACGACGTGGTGGCGATCAACCTTTC
GGGCCTGTTCTACTGCGTGCATGCCGTGCTGCCGGCCATGAGAAAGCAAC
GAGACGGCCTGATCATCAACGTGTCTTCGTGGGCCGGGCGGTTCGCTTCC
AAGCTCACGGGTCCGGCTTACAACGCGACCAAGCGCGCGGTGATTGCGCT
CACCGAGTCGATCAACATGGAGGAGTGCGTGAACGGCATCCGCGCAACCT
CCGTCCTGCCCGGCGAGGTGGCCACGCCCATCCTTCGCAAACGCCCCGTG
CCGCCGTCGAAGGAGGAGCAGGACCGGATGACGCAGTCGGAGGACCTGGG
TGCGGCGATCCTGTTCGTCGCGTCCATGCCTGCGCGCACCTGCGTGAACG
AGTTGATCATCGCGCCGACCTGGAACCGCTTCTACGTCGGCGGCCTCGAG
GTTCCCAAGAAATAG
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