mRNA_P-wetherbeei_contig20649.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20649.1.1
Unique NamemRNA_P-wetherbeei_contig20649.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20649.1.1 vs. uniprot
Match: A0A3C0Q7F0_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3C0Q7F0_9GAMM)

HSP 1 Score: 283 bits (724), Expect = 2.810e-90
Identity = 156/327 (47.71%), Postives = 206/327 (63.00%), Query Frame = 1
Query:    1 ATPMRSVMASLVFTTLAYLVYRYSPHT---LSLRGSVHDPIPLSGEQLLTWAYWLYVIAILAHYHWTATLKPSRALLAARALLRFAYSPLVVARRGLPDAERLGLLVTLLKVFFAPLMLLFLHGAVGSVLNNGLALARYSPASTQELFYAFNAYGFTFMYQLILLADVGFFTIGYLVEHPYLRNEIRSVDATLVGWVAAIACYPPFNGITVNILGGNVNDFPQFSNPILHLSINGLILALMLIYASASVALKWKASNLTHRGIVCGGPYRYVRHPAYVTKNIAWWLATVPALSAASTQSWWAMFLIVGSSAGWAAIYVLRALTEEDH 972
            A  + ++ ASL+   + YL Y   P+     S    +     ++ + LL  AY +Y I +L +Y      + S+++   RAL R   +PL V R+GLP  ERLGLL  LLK FFAPLM+ +L   +  +++NG  L  +     ++    FN  GF F+ QLIL  DV FFTIGYLVE P L+N+IRSVD TL GW  A+ACYPPF G+T  IL     DFPQF  P +H+++N L+L LM IY SASVAL +KASNLTHRGI+  GPYR++RHPAY+ KN+AWW+ ++PA+ A    S W+  LI+ S  GW  IY LRALTEEDH
Sbjct:   26 AQRLANISASLILILITYLFYSLVPYYQVYASKELQIFSYHFINRDALLL-AYVIYSILLLLYYLIENDPQISKSIYCLRALKRMLRAPLDVYRKGLPPQERLGLLSILLKAFFAPLMVAWLFSHMTHMIDNGTYLVTHFELLQKDFLAIFNYRGFWFLLQLILSLDVFFFTIGYLVELPILKNQIRSVDPTLFGWAVALACYPPFVGLTGTILAWEPVDFPQFETPAVHIAVNFLLLGLMAIYTSASVALNFKASNLTHRGIIATGPYRFIRHPAYICKNMAWWVGSIPAVIAGFHTSLWSALLILASVGGWTMIYTLRALTEEDH 351          
BLAST of mRNA_P-wetherbeei_contig20649.1.1 vs. uniprot
Match: UPI001EF212D6 (DUF1295 domain-containing protein n=1 Tax=Candidatus Nitrotoga sp. HW29 TaxID=2886963 RepID=UPI001EF212D6)

HSP 1 Score: 277 bits (709), Expect = 3.330e-88
Identity = 151/283 (53.36%), Postives = 188/283 (66.43%), Query Frame = 1
Query:  130 QLLTWAYWLYVIAILAHYHWTATLKPSRALLAARALLRFAYSPLVVARRGLPDAERLGLLVTLLKVFFAPLMLLFLHGAVGSVLNNGLAL-ARYSPASTQELFYAFNAYGFTFMYQLILLADVGFFTIGYLVEHPYLRNEIRSVDATLVGWVAAIACYPPFNGITVNILGGNVN-DFPQFSNPILHLSINGLILALMLIYASASVALKWKASNLTHRGIVCGGPYRYVRHPAYVTKNIAWWLATVPALSAASTQSWWAMFLIVGSSAGWAAIYVLRALTEEDH 972
            Q+L  A   Y   +L  Y    +   S+++L  RAL R A SP    RRGLP  ERLGLL  LLK FFAPLM+++L     S+L++G  L A +    T  L   FN +GF F+++LIL  DV FFTIGYL+E P L+NEIRSVD TL+GW  A+ACYPPFN +T  I GG  + DFPQF +P  H+  N L+L LM IY SAS+AL +KASNLTHRGI+  GPYR++RHPAYV KN+AWW+  VPAL  A+  S  A  +  GS  GW+ IY +RALTEEDH
Sbjct:   55 QVLLTATLGYTFLLLVFYLSEKSPGISKSILCLRALRRLATSPQTTWRRGLPADERLGLLSVLLKAFFAPLMVVWLFDHTASMLSHGSELLATWEKPETDWLLLLFNDHGFWFLFKLILFLDVFFFTIGYLIELPALKNEIRSVDPTLLGWTVALACYPPFNDLTGKIFGGGYSADFPQFDHPAFHVVANTLLLGLMAIYTSASIALNFKASNLTHRGIIAHGPYRFIRHPAYVCKNLAWWIGLVPALILATHTSLTATLMTFGSMLGWSVIYYMRALTEEDH 337          
BLAST of mRNA_P-wetherbeei_contig20649.1.1 vs. uniprot
Match: UPI0019214295 (DUF1295 domain-containing protein n=1 Tax=Methylomicrobium sp. RS1 TaxID=2802053 RepID=UPI0019214295)

HSP 1 Score: 274 bits (701), Expect = 6.010e-88
Identity = 141/256 (55.08%), Postives = 174/256 (67.97%), Query Frame = 1
Query:  208 SRALLAARALLRFAYSPLVVARRGLPDAERLGLLVTLLKVFFAPLMLLFLHGAVGSVLNNGLALARYSPASTQELFYAFNAYGFTFMYQLILLADVGFFTIGYLVEHPYLRNEIRSVDATLVGWVAAIACYPPFNGITVNILGGNVNDFPQFSNPILHLSINGLILALMLIYASASVALKWKASNLTHRGIVCGGPYRYVRHPAYVTKNIAWWLATVPALSA-ASTQSWWAMFLIVGSSAGWAAIYVLRALTEEDH 972
            S+++   RAL R   SP  V   GL   ERLG+L  LLK FFAPLM+ +L      +L NGL +       T E  + FN +GF F++Q IL  DV FFT+GYL+E P L N IRSVD T +GW  A+ACYPPFN I   IL   + +FPQFSNP++H+S N LIL LM +Y SASVAL +K SNLTHRGI+  GPYR++RHPAYV KN+AWW+ ++P+LSA AST S+W   LI+    GW  IYVLRALTEEDH
Sbjct:   13 SKSVYCLRALKRVVRSPRNVYEEGLKPEERLGILSILLKSFFAPLMVAWLLDHTIQMLTNGLFIFNNPGLLTSEFLFVFNKHGFWFLFQAILFLDVFFFTLGYLIELPRLNNIIRSVDPTFLGWAIALACYPPFNNIAGKILSWKITEFPQFSNPVIHISANLLILLLMTVYTSASVALNFKGSNLTHRGIIASGPYRFIRHPAYVCKNLAWWIGSLPSLSANASTSSFWKALLILAPMLGWTLIYVLRALTEEDH 268          
BLAST of mRNA_P-wetherbeei_contig20649.1.1 vs. uniprot
Match: A0A5C7V9J7_9PROT (DUF1295 domain-containing protein n=1 Tax=Nitrosomonas sp. TaxID=42353 RepID=A0A5C7V9J7_9PROT)

HSP 1 Score: 273 bits (698), Expect = 1.110e-86
Identity = 149/322 (46.27%), Postives = 203/322 (63.04%), Query Frame = 1
Query:   13 RSVMASLVFTTLAYLVYRYSPHTLSLRGSVHDPI--PLSGEQLLTWAYWLYVIAILAHYHWTATLKPSRALLAARALLRFAYSPLVVARRGLPDAERLGLLVTLLKVFFAPLMLLFLHGAVGSVLNNGLALARYSPASTQELFYAFNAYGFTFMYQLILLADVGFFTIGYLVEHPYLRNEIRSVDATLVGWVAAIACYPPFNGITVNILGGNVNDFPQFSNPILHLSINGLILALMLIYASASVALKWKASNLTHRGIVCGGPYRYVRHPAYVTKNIAWWLATVPALSAASTQSWWAMFLIVGSSAGWAAIYVLRALTEEDH 972
            R++ A+L    +    Y   P+  +   S  D +    S  Q+L      YV+ +   Y    + + S+++   RA+ R   SP  + + GLP  ERLGLL  LLK FF PLM+++L    G ++ +G  LA     +T E    FNA+GF FM+++IL  DV FFT+GY++E P L+NEIRSVD TL+GW  A+A YPPFNG+T ++  G   DFPQF++PILH+++N  +L LM  Y  AS+AL  KASNLTHRGI+  GPYRY+RHPAY  KN+AWW+  +PA+ AA+  S  A  L VGS  GW+ IY+LRALTEEDH
Sbjct:    6 RNLSATLFLILILGTFYGTVPYYQNYFSSSTDFLGQEYSHWQVLLTTMLAYVVILSIFYLTEKSPRISKSIYCLRAIQRLMRSPKSILQTGLPFEERLGLLSILLKGFFIPLMVVWLFAHTGHMIEHGNKLAVALNQATIEWISLFNAHGFWFMFKVILFLDVLFFTVGYMIELPSLKNEIRSVDPTLMGWFVALASYPPFNGLTSSVFAGYTTDFPQFNDPILHIALNIFLLILMAFYTWASIALNLKASNLTHRGIIMHGPYRYIRHPAYTCKNLAWWIGVLPAVIAATETSITATLLAVGSMLGWSIIYILRALTEEDH 327          
BLAST of mRNA_P-wetherbeei_contig20649.1.1 vs. uniprot
Match: A0A537A7N1_9PROT (DUF1295 domain-containing protein (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537A7N1_9PROT)

HSP 1 Score: 270 bits (690), Expect = 1.350e-86
Identity = 144/247 (58.30%), Postives = 173/247 (70.04%), Query Frame = 1
Query:  232 ALLRFAYSPLVVARRGLPDAERLGLLVTLLKVFFAPLMLLFLHGAVGSVLNNGLALARYSPASTQELFYAFNAYGFTFMYQLILLADVGFFTIGYLVEHPYLRNEIRSVDATLVGWVAAIACYPPFNGITVNILGGNVNDFPQFSNPILHLSINGLILALMLIYASASVALKWKASNLTHRGIVCGGPYRYVRHPAYVTKNIAWWLATVPALSAASTQSWWAMFLIVGSSAGWAAIYVLRALTEEDH 972
            ALLR   SP  + RRGL   ERL +L TLLK FFAP+M + L       L+NG A+     A   +  +AFN YGF    Q ILL DV  FT+GYLVE P L+NEIRSVD TLVGW AA+ CYPPFNGIT ++LG  V+DFPQF NP  H+ +N L+LALM IYA ASVAL +KASNLTHRGIV  GPY  +RHPAY  KN+AWW+ +VP +SAA +QSW+   L +G+  GW  +YVLRA+TEEDH
Sbjct:    4 ALLR---SPAALVRRGLSGDERLAVLSTLLKAFFAPIMAVSLMRFTMGSLDNGWAMVA-GGALDADFAHAFNRYGFWLAMQTILLVDVLLFTVGYLVELPTLKNEIRSVDPTLVGWTAALLCYPPFNGITSHVLGYQVSDFPQFDNPTAHVLLNILLLALMAIYAGASVALGFKASNLTHRGIVERGPYAVIRHPAYTCKNMAWWIGSVPLVSAAFSQSWFNGILALGTVVGWTMLYVLRAITEEDH 246          
BLAST of mRNA_P-wetherbeei_contig20649.1.1 vs. uniprot
Match: A0A3E1DU76_9PROT (Protein-S-isoprenylcysteine O-methyltransferase Ste14 n=3 Tax=unclassified Candidatus Nitrotoga TaxID=2647919 RepID=A0A3E1DU76_9PROT)

HSP 1 Score: 268 bits (685), Expect = 1.820e-84
Identity = 142/257 (55.25%), Postives = 177/257 (68.87%), Query Frame = 1
Query:  208 SRALLAARALLRFAYSPLVVARRGLPDAERLGLLVTLLKVFFAPLMLLFLHGAVGSVLNNGLAL-ARYSPASTQELFYAFNAYGFTFMYQLILLADVGFFTIGYLVEHPYLRNEIRSVDATLVGWVAAIACYPPFNGITVNILGGNVN-DFPQFSNPILHLSINGLILALMLIYASASVALKWKASNLTHRGIVCGGPYRYVRHPAYVTKNIAWWLATVPALSAASTQSWWAMFLIVGSSAGWAAIYVLRALTEEDH 972
            S+++L  RAL R   SP V  R GLP  ERLGLL  LLK FFAPLM+++L      +L+NG  L A +    T  L   FN +GF F+++LIL  DV FFTIGYL+E P L+NEIRSVD TL+GW  A+ACYPPFN +T  I GG  + DFPQF +P+ H++ N L+L LM IY SAS+AL +KASNLTHRGI+  GPYR++RHPAYV KN+AWW+   PAL  A   S  +  +  GS  GW+ IY +RALTEEDH
Sbjct:   91 SKSILCLRALRRLVSSPQVTWRAGLPADERLGLLSVLLKAFFAPLMVVWLFDHTALMLSNGSELLAAWGKPETNWLS-LFNDHGFWFLFKLILFLDVVFFTIGYLIELPALKNEIRSVDPTLLGWTVALACYPPFNDLTSKIFGGGYSADFPQFGHPVFHVAANTLLLGLMAIYTSASIALNFKASNLTHRGIIASGPYRFIRHPAYVCKNLAWWIGLGPALILAIQTSLTSTLMTFGSMFGWSVIYYMRALTEEDH 346          
BLAST of mRNA_P-wetherbeei_contig20649.1.1 vs. uniprot
Match: A0A1H8D6F2_9PROT (Uncharacterized protein n=2 Tax=Nitrosomonas marina TaxID=917 RepID=A0A1H8D6F2_9PROT)

HSP 1 Score: 266 bits (679), Expect = 1.110e-83
Identity = 142/281 (50.53%), Postives = 181/281 (64.41%), Query Frame = 1
Query:  130 QLLTWAYWLYVIAILAHYHWTATLKPSRALLAARALLRFAYSPLVVARRGLPDAERLGLLVTLLKVFFAPLMLLFLHGAVGSVLNNGLALARYSPASTQELFYAFNAYGFTFMYQLILLADVGFFTIGYLVEHPYLRNEIRSVDATLVGWVAAIACYPPFNGITVNILGGNVNDFPQFSNPILHLSINGLILALMLIYASASVALKWKASNLTHRGIVCGGPYRYVRHPAYVTKNIAWWLATVPALSAASTQSWWAMFLIVGSSAGWAAIYVLRALTEEDH 972
            Q+L      Y   +   Y      + S+++   RAL + A SP  V + GLP  ERLGLL  LLK FFAPLM+++L    G +L +G  L +            FN  GF F+++LIL  DV FFTIGYLVE P L NEIRSVD TL+GW  A+A YPPFNG+T  + GG   DFPQFS+P +H+ +N  +L LM IY SASVAL +KASNLTHRGI+  GPYRY+RHPAYV KN+AWW+  +PA++ A   S  A  + +GS  GW+ IY++RALTEE H
Sbjct:   57 QVLVVTTLFYTFTLFVFYLTEPAPRVSKSIYCLRALHKIATSPATVWKTGLPFDERLGLLSILLKAFFAPLMIVWLFSHTGHMLEHGNQLLQTIGDHNIGWLALFNTSGFWFVFKLILFLDVLFFTIGYLVELPSLNNEIRSVDPTLLGWAVALASYPPFNGLTSMLFGGYFTDFPQFSDPAVHVIMNVTLLILMAIYTSASVALNFKASNLTHRGIIMHGPYRYIRHPAYVCKNLAWWIGLMPAVAVAWQTSLTATLVTIGSMVGWSMIYIMRALTEERH 337          
BLAST of mRNA_P-wetherbeei_contig20649.1.1 vs. uniprot
Match: A0A1F4K6X0_9BURK (Uncharacterized protein n=1 Tax=Burkholderiales bacterium RIFCSPLOWO2_12_FULL_61_40 TaxID=1797566 RepID=A0A1F4K6X0_9BURK)

HSP 1 Score: 245 bits (626), Expect = 1.080e-75
Identity = 140/321 (43.61%), Postives = 187/321 (58.26%), Query Frame = 1
Query:   16 SVMASLVFTTLAYLVYRYSPHTLSLRGSVHDPIPL--SGEQLLTWAYWLYVIAILAHYHWTATLKPSRALLAARALLRFAYSPLVVARRGLPDAERLGLLVTLLKVFFAPLMLLFLHGAVGSVLNNGLALARYSPASTQELFYAFNAYGFTFMYQLILLADVGFFTIGYLVEHPYLRNEIRSVDATLVGWVAAIACYPPFNGITVNILGGNVNDFPQFSNPILHLSINGLILALMLIYASASVALKWKASNLTHRGIVCGGPYRYVRHPAYVTKNIAWWLATVPALSAASTQSWWAMFLIVGSSAGWAAIYVLRALTEEDH 972
            ++ AS     LA  +Y  SP+       ++ P  +   G+  L  A  +Y + +  +Y    + +PS++L   +    F  +P    R+GL   +RL +L TLLK FF P+M++ L         + LA+   +          FN +GF F  QLIL  DV  FT+GYLVE P L NEIRSVD T +GW  A+ CYPPFN +TV ILG   ++FP + NP +HL +N L+L LM +YASASVAL  KASNLT+RGIV  GPY  VRHPAY  KN+AWW+ + P ++AA  QS W     +GS  GW  IY +RALTEEDH
Sbjct:   19 NLAASAALVALACAIYLGSPYNTVQLTQLYGPPSMLFRGDHFLQAAALVYAVLLALYYLAERSPRPSKSLRFFQVAWAFLRAPAATWRQGLTSEQRLAVLATLLKGFFGPMMVVSLMDFCMGAWVHALAILA-TGGLWAHFGQVFNRHGFWFAMQLILFVDVLVFTVGYLVESPRLGNEIRSVDPTWLGWAVAMVCYPPFNQVTVAILGSYKSEFPTYDNPTVHLVMNLLLLLLMALYASASVALGLKASNLTYRGIVARGPYAVVRHPAYTCKNMAWWIGSAPLVAAAFGQSLWLGLQALGSVLGWTLIYTMRALTEEDH 338          
BLAST of mRNA_P-wetherbeei_contig20649.1.1 vs. uniprot
Match: A0A4V3CTE8_9BURK (Protein-S-isoprenylcysteine O-methyltransferase Ste14 n=1 Tax=Paucibacter toxinivorans TaxID=270368 RepID=A0A4V3CTE8_9BURK)

HSP 1 Score: 231 bits (590), Expect = 2.970e-70
Identity = 140/319 (43.89%), Postives = 190/319 (59.56%), Query Frame = 1
Query:   22 MASLVFTTLAYLVYRYSPHTLSLRGSVHDPIPLSGEQLLTWAYWLYVIAILAHYHWTATLKPSRALLAARALLRFAYSPLVVARRGLPDAERLGLLVTLLKVFFAPLM-LLFLHGAVGSVLNNGLALARYSPAST-QELFYAFNAYGFTFMYQLILLADVGFFTIGYLVEHPYLRNEIRSVDATLVGWVAAIACYPPFNGITVNILGGNVNDFPQFSNPILHLSINGLILALMLIYASASVALKWKASNLTHRGIVCGGPYRYVRHPAYVTKNIAWWLATVPALSAASTQSWWAMFLIVGSSAGWAAIYVLRALTEEDH 972
            + ++     AY +  Y+   LS R S    +  SG + L  A   Y + +   +   +    +++L     L  FA +P      GL  A+RL LL TLLK FF PLM +  +   V + +N    +A ++ A   ++    FN +G+ F  QL+L  DV  FT+GYLVE P L N IRSVD T +GW AA+ CYPPFN +T  +LG  +++FPQF+NP +HL +N L+LA M  YA++S+AL  KASNLTHRGIV  GPY  VRHPAYV KN+AW + ++PAL  A  QS       +GS  GWAA+Y+LRALTEEDH
Sbjct:   24 LTTIALACSAYALMPYNQKQLSTRFSGAG-LSFSGLEFLVLAALAYAVTVAVWHLSESQPGCAKSLRCWYVLAAFAQAPRRTFDAGLAPADRLALLATLLKCFFGPLMGMSLMLFCVNAWVNGAQLMAGFAGADNWRDGLLLFNRHGYWFALQLLLFVDVLAFTLGYLVELPRLGNAIRSVDPTWLGWGAALLCYPPFNSLTNALLGSQLSEFPQFANPTVHLLMNLLLLAAMAGYAASSLALGLKASNLTHRGIVARGPYALVRHPAYVCKNLAWLIGSLPALFTAFGQSPLTGLQALGSVLGWAALYLLRALTEEDH 341          
BLAST of mRNA_P-wetherbeei_contig20649.1.1 vs. uniprot
Match: UPI000E314B26 (hypothetical protein n=1 Tax=Steroidobacter cummioxidans TaxID=1803913 RepID=UPI000E314B26)

HSP 1 Score: 195 bits (496), Expect = 4.820e-56
Identity = 110/227 (48.46%), Postives = 136/227 (59.91%), Query Frame = 1
Query:  307 LVTLLKVFFAPLM----LLFLHGAVGSVLNNGLALARYSPASTQELFYAFNAYGFTFMYQLILLADVGFFTIGYLVEHPYLRNEIRSVDATLVGWVAAIACYPPFNGITVNILGGNVNDFPQFSNPILHLSINGLILALMLIYASASVALKWKASNLTHRGIVCGGPYRYVRHPAYVTKNIAWWLATVPALSAASTQSWWAMFLI-VGSSAGWAAIYVLRALTEEDH 972
            L  LLK FFAPLM    L+ +    GS+L   L        S +ELF   +   F   +QLIL  D   FTIGY++E P L N IRSVD T  GW   +ACYPPFN +T+  L    +DFPQFSN  LHL+IN  +L  + +++ AS+AL +KASNLT+RGIV  GPY +VRHP Y  KN+AWWL  +P L A      W  F   + +  GW AIY LRALTEE H
Sbjct:  135 LALLLKFFFAPLMINWCLIHIANLTGSLLQ--LIAGSGDSLSARELF---DTALFWAAFQLILFVDTLLFTIGYIIELPALGNRIRSVDPTFFGWFICLACYPPFNDLTLRFLEWQSSDFPQFSNDFLHLAINSAVLVALALFSWASIALGFKASNLTNRGIVTHGPYAFVRHPGYAAKNLAWWLGALPILGATLAAGHWRAFAYSLIALFGWTAIYALRALTEERH 356          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20649.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0Q7F0_9GAMM2.810e-9047.71Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
UPI001EF212D63.330e-8853.36DUF1295 domain-containing protein n=1 Tax=Candidat... [more]
UPI00192142956.010e-8855.08DUF1295 domain-containing protein n=1 Tax=Methylom... [more]
A0A5C7V9J7_9PROT1.110e-8646.27DUF1295 domain-containing protein n=1 Tax=Nitrosom... [more]
A0A537A7N1_9PROT1.350e-8658.30DUF1295 domain-containing protein (Fragment) n=1 T... [more]
A0A3E1DU76_9PROT1.820e-8455.25Protein-S-isoprenylcysteine O-methyltransferase St... [more]
A0A1H8D6F2_9PROT1.110e-8350.53Uncharacterized protein n=2 Tax=Nitrosomonas marin... [more]
A0A1F4K6X0_9BURK1.080e-7543.61Uncharacterized protein n=1 Tax=Burkholderiales ba... [more]
A0A4V3CTE8_9BURK2.970e-7043.89Protein-S-isoprenylcysteine O-methyltransferase St... [more]
UPI000E314B264.820e-5648.46hypothetical protein n=1 Tax=Steroidobacter cummio... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20649contigP-wetherbeei_contig20649:241..1212 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1123487.KB892844_gene824
PFAMsICMT
Model size972
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue3.38e-54
EggNOG OGsCOG2020@1|root,COG2020@2|Bacteria,1R55E@1224|Proteobacteria,2VWQW@28216|Betaproteobacteria
DescriptionIsoprenylcysteine carboxyl methyltransferase (ICMT) family
Cds size963
COG categoryO
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186205.4038649-UTR-P-wetherbeei_contig20649:240..2491683186205.4038649-UTR-P-wetherbeei_contig20649:240..249Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig20649 241..249 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186205.4167747-CDS-P-wetherbeei_contig20649:249..12121683186205.4167747-CDS-P-wetherbeei_contig20649:249..1212Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20649 250..1212 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20649.1.1prot_P-wetherbeei_contig20649.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20649 250..1212 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20649.1.1

>prot_P-wetherbeei_contig20649.1.1 ID=prot_P-wetherbeei_contig20649.1.1|Name=mRNA_P-wetherbeei_contig20649.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=321bp
MRSVMASLVFTTLAYLVYRYSPHTLSLRGSVHDPIPLSGEQLLTWAYWLY
VIAILAHYHWTATLKPSRALLAARALLRFAYSPLVVARRGLPDAERLGLL
VTLLKVFFAPLMLLFLHGAVGSVLNNGLALARYSPASTQELFYAFNAYGF
TFMYQLILLADVGFFTIGYLVEHPYLRNEIRSVDATLVGWVAAIACYPPF
NGITVNILGGNVNDFPQFSNPILHLSINGLILALMLIYASASVALKWKAS
NLTHRGIVCGGPYRYVRHPAYVTKNIAWWLATVPALSAASTQSWWAMFLI
VGSSAGWAAIYVLRALTEEDH
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mRNA from alignment at P-wetherbeei_contig20649:241..1212+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20649.1.1 ID=mRNA_P-wetherbeei_contig20649.1.1|Name=mRNA_P-wetherbeei_contig20649.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=972bp|location=Sequence derived from alignment at P-wetherbeei_contig20649:241..1212+ (Phaeothamnion wetherbeei SAG_119_79)
GCCACGCCCATGCGTAGCGTGATGGCCTCTCTGGTATTCACCACGCTGGC CTATCTCGTGTACCGATATTCTCCCCATACATTGAGCCTGCGAGGGTCAG TACATGACCCTATCCCGCTGTCTGGCGAACAGCTTCTAACTTGGGCGTAT TGGCTCTACGTCATCGCCATCCTCGCCCATTACCACTGGACAGCAACGCT CAAGCCGTCTCGCGCTTTGCTGGCCGCACGCGCCCTTTTGCGTTTTGCAT ACTCGCCGCTCGTGGTTGCCCGGCGCGGACTACCTGATGCAGAGCGTTTA GGGTTGTTGGTGACCCTGCTTAAGGTGTTCTTTGCACCGCTTATGCTCCT TTTCTTACACGGCGCGGTGGGTAGCGTGCTCAACAATGGCTTGGCGCTGG CTCGGTATTCGCCGGCATCAACGCAAGAGCTGTTCTACGCATTCAACGCT TATGGGTTCACATTCATGTACCAGCTTATTTTGCTGGCTGATGTCGGATT TTTTACTATTGGCTATCTGGTCGAGCATCCATACCTGCGTAATGAAATAC GTTCAGTCGATGCGACCTTGGTCGGCTGGGTCGCAGCCATCGCGTGCTAT CCGCCGTTTAATGGGATCACCGTGAACATTCTCGGCGGCAACGTCAACGA TTTTCCTCAGTTCTCCAATCCTATCTTGCACCTGTCTATCAATGGACTGA TCTTGGCGCTGATGCTCATATACGCCTCGGCATCTGTCGCGCTGAAATGG AAAGCCAGCAACTTGACCCATCGCGGAATTGTTTGCGGTGGTCCTTACCG TTATGTCAGACACCCCGCGTACGTGACGAAGAATATCGCCTGGTGGTTAG CCACCGTCCCAGCGTTGTCAGCGGCCTCGACGCAATCGTGGTGGGCGATG TTCTTAATCGTTGGGTCTTCCGCTGGCTGGGCGGCGATCTATGTATTGCG TGCGTTGACGGAAGAAGATCAT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20649:241..1212+

>mRNA_P-wetherbeei_contig20649.1.1 ID=mRNA_P-wetherbeei_contig20649.1.1|Name=mRNA_P-wetherbeei_contig20649.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=963bp|location=Sequence derived from alignment at P-wetherbeei_contig20649:241..1212+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCGTAGCGTGATGGCCTCTCTGGTATTCACCACGCTGGCCTATCTCGT
GTACCGATATTCTCCCCATACATTGAGCCTGCGAGGGTCAGTACATGACC
CTATCCCGCTGTCTGGCGAACAGCTTCTAACTTGGGCGTATTGGCTCTAC
GTCATCGCCATCCTCGCCCATTACCACTGGACAGCAACGCTCAAGCCGTC
TCGCGCTTTGCTGGCCGCACGCGCCCTTTTGCGTTTTGCATACTCGCCGC
TCGTGGTTGCCCGGCGCGGACTACCTGATGCAGAGCGTTTAGGGTTGTTG
GTGACCCTGCTTAAGGTGTTCTTTGCACCGCTTATGCTCCTTTTCTTACA
CGGCGCGGTGGGTAGCGTGCTCAACAATGGCTTGGCGCTGGCTCGGTATT
CGCCGGCATCAACGCAAGAGCTGTTCTACGCATTCAACGCTTATGGGTTC
ACATTCATGTACCAGCTTATTTTGCTGGCTGATGTCGGATTTTTTACTAT
TGGCTATCTGGTCGAGCATCCATACCTGCGTAATGAAATACGTTCAGTCG
ATGCGACCTTGGTCGGCTGGGTCGCAGCCATCGCGTGCTATCCGCCGTTT
AATGGGATCACCGTGAACATTCTCGGCGGCAACGTCAACGATTTTCCTCA
GTTCTCCAATCCTATCTTGCACCTGTCTATCAATGGACTGATCTTGGCGC
TGATGCTCATATACGCCTCGGCATCTGTCGCGCTGAAATGGAAAGCCAGC
AACTTGACCCATCGCGGAATTGTTTGCGGTGGTCCTTACCGTTATGTCAG
ACACCCCGCGTACGTGACGAAGAATATCGCCTGGTGGTTAGCCACCGTCC
CAGCGTTGTCAGCGGCCTCGACGCAATCGTGGTGGGCGATGTTCTTAATC
GTTGGGTCTTCCGCTGGCTGGGCGGCGATCTATGTATTGCGTGCGTTGAC
GGAAGAAGATCAT
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