mRNA_P-wetherbeei_contig20643.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20643.1.1
Unique NamemRNA_P-wetherbeei_contig20643.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20643.1.1 vs. uniprot
Match: A1K4U0_AZOSB (Putative glucose dehydrogenase alpha subunit n=2 Tax=Azoarcus TaxID=12960 RepID=A1K4U0_AZOSB)

HSP 1 Score: 691 bits (1782), Expect = 2.460e-247
Identity = 319/403 (79.16%), Postives = 359/403 (89.08%), Query Frame = 1
Query:    1 ANELCQKGIKVVLLEAGAEQSTGKYLNDEWASFQQLAWTDMRTTSGNWRLAKDFPNLPTWICKTVGGTTTHWAGASLRFHEHDFRARTTYGVIDGANLLDWPITLADLEPYYARAEDKLGVTRTNDIPGLPGNNNFKVFYNGAQKLGYKDCHTGRMAINSRPRAGRTSCRQLGFCFQGCKMGAKWSTLYTEIPAAMATGKLELRTQCHVSSIEHDDKGRVTGVVYFDAAGKEQRQRARVVCVAGNSIETPRLLLLSASSKYPDGLANSSGQVGRNYMRHTTGSVYAAFDEPVHMYRGTTMAGIITDESHHKPERGFAGGYELETVSVGLPFAAAFIAPGEWGPDFAYFMDHYANLAGMWIVGEDMPQESNRVSLNSKVKDQWGLPVPHVHYDDHKNDVAMREH 1209
            ANELCQKGIKVV+LEAG  QS   ++NDEWA+F QL+WTD RTTSG+WR+AKDFPNLP WICKTVGGTTTHWAGASLRF EH+FR RT YG I GANLLDWP+TLA+LEPYYARAEDK+GVTRT+DIPGLPGNNNFKVFYNGA K+GY    TGRMAINS PRAGR SC+Q GFCFQGCK GAKWSTLYTEIPAA  TGKLELRT+CHV+ IEHD  G+ TGVVYFD  GKEQRQ+ARVVCVAGN+IETPRLLL+SASSK+PDGLANSSGQVGRNYMRHTTGSVYA F++PVHMYRGTTMAGI+ DE+HH  +RGFAGGYELET+S+GLPF AAF+ PG WG DFA  MD+Y N+AG+WIVGEDMPQE+NRV+L++  KDQWGLPVP+VHYDDH ND+A+R+H
Sbjct:   25 ANELCQKGIKVVVLEAGKRQSPATFINDEWAAFGQLSWTDKRTTSGSWRVAKDFPNLPAWICKTVGGTTTHWAGASLRFQEHEFRTRTVYGDIAGANLLDWPLTLAELEPYYARAEDKMGVTRTHDIPGLPGNNNFKVFYNGATKMGY-GATTGRMAINSEPRAGRGSCQQYGFCFQGCKSGAKWSTLYTEIPAAEKTGKLELRTECHVARIEHDAAGKATGVVYFDKDGKEQRQKARVVCVAGNAIETPRLLLMSASSKFPDGLANSSGQVGRNYMRHTTGSVYATFNDPVHMYRGTTMAGIVQDEAHHNTKRGFAGGYELETLSLGLPFMAAFLNPGGWGKDFAEAMDNYVNMAGLWIVGEDMPQETNRVTLHATEKDQWGLPVPNVHYDDHPNDIALRKH 426          
BLAST of mRNA_P-wetherbeei_contig20643.1.1 vs. uniprot
Match: A0A5E4XWX2_9BURK (2-keto-gluconate dehydrogenase n=3 Tax=Burkholderiaceae TaxID=119060 RepID=A0A5E4XWX2_9BURK)

HSP 1 Score: 687 bits (1773), Expect = 5.970e-246
Identity = 317/403 (78.66%), Postives = 352/403 (87.34%), Query Frame = 1
Query:    1 ANELCQKGIKVVLLEAGAEQSTGKYLNDEWASFQQLAWTDMRTTSGNWRLAKDFPNLPTWICKTVGGTTTHWAGASLRFHEHDFRARTTYGVIDGANLLDWPITLADLEPYYARAEDKLGVTRTNDIPGLPGNNNFKVFYNGAQKLGYKDCHTGRMAINSRPRAGRTSCRQLGFCFQGCKMGAKWSTLYTEIPAAMATGKLELRTQCHVSSIEHDDKGRVTGVVYFDAAGKEQRQRARVVCVAGNSIETPRLLLLSASSKYPDGLANSSGQVGRNYMRHTTGSVYAAFDEPVHMYRGTTMAGIITDESHHKPERGFAGGYELETVSVGLPFAAAFIAPGEWGPDFAYFMDHYANLAGMWIVGEDMPQESNRVSLNSKVKDQWGLPVPHVHYDDHKNDVAMREH 1209
            ANELCQKG+KVVLLEAG  QS+  ++NDEW SF+QLAWTD RTTSG+WR+A DFPNLP WICKTVGGTTTHWAGASLRFHEH+ +ART YG + GANLLDWPI+LADLEPYYA+AEDK+GVTRTNDI GLPGNNNFKV YNGA KLGYK C TGRMAINS PRAGR  C QLGFCFQGCK GAKWSTLYTEIPAA  TG LELRTQ HV+ IEH+ +G+VTGVVY+DA GK+QRQ+ARVVCVAGNSIETPRLLLLSAS K+P GLANSS QVGRNYMRH TGSVYA FD PVH YRGT MAGII DE  H P+RGF GGYE+ET+S+GL F AAF+ PG WGP+FA F+D+YAN AGMW+VGEDMPQ+SNRV+LNS  KDQ+GLPVP+VHYDDH ND+AMREH
Sbjct:   25 ANELCQKGVKVVLLEAGQRQSSATFINDEWPSFKQLAWTDKRTTSGSWRVALDFPNLPAWICKTVGGTTTHWAGASLRFHEHELKARTHYGAVAGANLLDWPISLADLEPYYAKAEDKMGVTRTNDIAGLPGNNNFKVMYNGATKLGYKQCSTGRMAINSAPRAGRGRCMQLGFCFQGCKSGAKWSTLYTEIPAAETTGNLELRTQAHVTQIEHNSQGKVTGVVYYDAQGKQQRQKARVVCVAGNSIETPRLLLLSASGKFPHGLANSSDQVGRNYMRHMTGSVYAYFDHPVHFYRGTVMAGIIQDEVEHNPKRGFVGGYEMETISLGLSFYAAFLNPGSWGPEFADFIDNYANTAGMWLVGEDMPQQSNRVTLNSAAKDQYGLPVPNVHYDDHPNDIAMREH 427          
BLAST of mRNA_P-wetherbeei_contig20643.1.1 vs. uniprot
Match: A0A069PR81_9BURK (2-keto-gluconate dehydrogenase n=3 Tax=Caballeronia TaxID=1827195 RepID=A0A069PR81_9BURK)

HSP 1 Score: 686 bits (1769), Expect = 2.420e-245
Identity = 316/403 (78.41%), Postives = 355/403 (88.09%), Query Frame = 1
Query:    1 ANELCQKGIKVVLLEAGAEQSTGKYLNDEWASFQQLAWTDMRTTSGNWRLAKDFPNLPTWICKTVGGTTTHWAGASLRFHEHDFRARTTYGVIDGANLLDWPITLADLEPYYARAEDKLGVTRTNDIPGLPGNNNFKVFYNGAQKLGYKDCHTGRMAINSRPRAGRTSCRQLGFCFQGCKMGAKWSTLYTEIPAAMATGKLELRTQCHVSSIEHDDKGRVTGVVYFDAAGKEQRQRARVVCVAGNSIETPRLLLLSASSKYPDGLANSSGQVGRNYMRHTTGSVYAAFDEPVHMYRGTTMAGIITDESHHKPERGFAGGYELETVSVGLPFAAAFIAPGEWGPDFAYFMDHYANLAGMWIVGEDMPQESNRVSLNSKVKDQWGLPVPHVHYDDHKNDVAMREH 1209
            ANELCQKG+KVVLLEAG  QS+  ++NDEW SF QLAWTD RTTSGNWR+A+DFP LP W+CKTVGGTTTHWAGASLRFH H+ +ARTTYG IDGANL+DWPITLADL PYYARAEDK+GVTRTN IPGLPGNNNFK+ Y+GA K+GYK C+TG MAINSRPRAGR SC QLGFCFQGCK GAKWSTLYTEIPAA ATG+L+LR + HV  IE +  G+ +GVVY DA GK+QRQRARVVCVAGNSIETPRLLLLS SSK+PDGLANSSGQVGRNYMRHTTGSVYA F +PVH YRGTTMAGI+TDE+ + P+RGFAGGYELET+++GLPFAAAF+ PG WG DF Y+MD+YANLAGMWIVGEDMP+ESNRV+LN  VKD+ GLPV +VHYDDH ND+AMR H
Sbjct:   25 ANELCQKGVKVVLLEAGKRQSSATFVNDEWKSFGQLAWTDTRTTSGNWRIARDFPQLPAWLCKTVGGTTTHWAGASLRFHAHELKARTTYGAIDGANLMDWPITLADLTPYYARAEDKMGVTRTNGIPGLPGNNNFKIMYDGATKVGYKTCNTGHMAINSRPRAGRASCMQLGFCFQGCKSGAKWSTLYTEIPAAEATGRLDLRPESHVMRIETNAVGKASGVVYMDADGKQQRQRARVVCVAGNSIETPRLLLLSESSKFPDGLANSSGQVGRNYMRHTTGSVYAVFPQPVHFYRGTTMAGIVTDEAVYNPKRGFAGGYELETIALGLPFAAAFLDPGAWGRDFTYYMDNYANLAGMWIVGEDMPRESNRVTLNRDVKDKLGLPVANVHYDDHPNDIAMRNH 427          
BLAST of mRNA_P-wetherbeei_contig20643.1.1 vs. uniprot
Match: A0A317MU64_9GAMM (Choline dehydrogenase-like flavoprotein n=1 Tax=Plasticicumulans acidivorans TaxID=886464 RepID=A0A317MU64_9GAMM)

HSP 1 Score: 685 bits (1767), Expect = 4.890e-245
Identity = 319/403 (79.16%), Postives = 350/403 (86.85%), Query Frame = 1
Query:    1 ANELCQKGIKVVLLEAGAEQSTGKYLNDEWASFQQLAWTDMRTTSGNWRLAKDFPNLPTWICKTVGGTTTHWAGASLRFHEHDFRARTTYGVIDGANLLDWPITLADLEPYYARAEDKLGVTRTNDIPGLPGNNNFKVFYNGAQKLGYKDCHTGRMAINSRPRAGRTSCRQLGFCFQGCKMGAKWSTLYTEIPAAMATGKLELRTQCHVSSIEHDDKGRVTGVVYFDAAGKEQRQRARVVCVAGNSIETPRLLLLSASSKYPDGLANSSGQVGRNYMRHTTGSVYAAFDEPVHMYRGTTMAGIITDESHHKPERGFAGGYELETVSVGLPFAAAFIAPGEWGPDFAYFMDHYANLAGMWIVGEDMPQESNRVSLNSKVKDQWGLPVPHVHYDDHKNDVAMREH 1209
            ANELCQ+GI VVLLEAG  QS+  ++NDEW SF QLAW D RTTSG+WR+AKDFPNLP WICKTVGGTTTHWAGASLRFH+ +FRAR+TYG I GANLLDWP+TLA+LEPYYARAEDK+GVTRTN IPGLPGNNNFKVFYNGA K GY  CHTGRMAINSRPRAGR SC QLGFCFQGCK GAKWSTLYTEIPAA AT  LELRT  HVS IEHD +GR +GVVYFDA+G EQRQ+ARVVCVAGNSIETPRLLLLSAS K+PDGLANSSGQVGRNYMRH TGSVYA FD+PVH YRGT MAG I DE+ + P RGF GGYE+ET+S+GLPF  AF+ PG WGPDFA  M  Y + AGMW+VGEDMPQESNRV+LN+ VKDQWGLPVP+VH+DDH ND+AMREH
Sbjct:   25 ANELCQQGIDVVLLEAGQRQSSAAFINDEWDSFAQLAWLDKRTTSGSWRIAKDFPNLPAWICKTVGGTTTHWAGASLRFHDWEFRARSTYGEIKGANLLDWPVTLAELEPYYARAEDKMGVTRTNGIPGLPGNNNFKVFYNGAIKAGYGQCHTGRMAINSRPRAGRNSCLQLGFCFQGCKSGAKWSTLYTEIPAAEATDHLELRTGAHVSRIEHDARGRASGVVYFDASGVEQRQKARVVCVAGNSIETPRLLLLSASGKFPDGLANSSGQVGRNYMRHMTGSVYAVFDQPVHFYRGTVMAGAILDEARNDPGRGFVGGYEMETLSLGLPFMGAFLEPGGWGPDFARMMSLYTHTAGMWLVGEDMPQESNRVTLNTAVKDQWGLPVPNVHFDDHPNDLAMREH 427          
BLAST of mRNA_P-wetherbeei_contig20643.1.1 vs. uniprot
Match: A0A6G8NS51_9BURK (2-methyl-1,2-propanediol dehydrogenase n=14 Tax=Burkholderiaceae TaxID=119060 RepID=A0A6G8NS51_9BURK)

HSP 1 Score: 676 bits (1745), Expect = 1.090e-241
Identity = 313/403 (77.67%), Postives = 349/403 (86.60%), Query Frame = 1
Query:    1 ANELCQKGIKVVLLEAGAEQSTGKYLNDEWASFQQLAWTDMRTTSGNWRLAKDFPNLPTWICKTVGGTTTHWAGASLRFHEHDFRARTTYGVIDGANLLDWPITLADLEPYYARAEDKLGVTRTNDIPGLPGNNNFKVFYNGAQKLGYKDCHTGRMAINSRPRAGRTSCRQLGFCFQGCKMGAKWSTLYTEIPAAMATGKLELRTQCHVSSIEHDDKGRVTGVVYFDAAGKEQRQRARVVCVAGNSIETPRLLLLSASSKYPDGLANSSGQVGRNYMRHTTGSVYAAFDEPVHMYRGTTMAGIITDESHHKPERGFAGGYELETVSVGLPFAAAFIAPGEWGPDFAYFMDHYANLAGMWIVGEDMPQESNRVSLNSKVKDQWGLPVPHVHYDDHKNDVAMREH 1209
            ANELCQKG+KVV+LEAG  QS+  ++NDEW SF QLAWTD RTTSG WR+AKDFP LP WICKTVGGTTTHWAGASLRFHEH+F+ARTTYG ID ANLLDWPITLADLEPYYARAEDK+GVTRTN +PGLPGNNNFK+ Y+GA K+GYK+C TG MAINSRPRAGR  C QLGFCFQGCK GAKWSTLYTEIPAA ATG+L+LR + HV  IE +  G+ + VVY DA GK+QRQRARVVCVAGNSIETPRLLLLS SSK+PDGLANSSGQVGRNYMRHTTGSV+  F EPVH YRGT MAGI+TDE+   P+RGFAGGYE+ET+S+GLPFAAAF  PG WG DF Y+MD+YAN AGMWIVGEDMP+E+NRV+LN  VKDQ GLPV +VHYDDH ND AMR+H
Sbjct:   25 ANELCQKGVKVVVLEAGKRQSSATFINDEWKSFGQLAWTDKRTTSGTWRVAKDFPELPAWICKTVGGTTTHWAGASLRFHEHEFKARTTYGSIDQANLLDWPITLADLEPYYARAEDKMGVTRTNGVPGLPGNNNFKILYDGATKVGYKNCSTGHMAINSRPRAGRGRCMQLGFCFQGCKSGAKWSTLYTEIPAAEATGRLDLRPESHVMRIETNAAGKASSVVYLDADGKQQRQRARVVCVAGNSIETPRLLLLSESSKHPDGLANSSGQVGRNYMRHTTGSVFGVFKEPVHFYRGTVMAGIVTDEAEFNPKRGFAGGYEMETISLGLPFAAAFFDPGAWGSDFTYYMDNYANTAGMWIVGEDMPRETNRVTLNHDVKDQVGLPVANVHYDDHPNDTAMRDH 427          
BLAST of mRNA_P-wetherbeei_contig20643.1.1 vs. uniprot
Match: A0A4R6E6C0_9RHOO (Choline dehydrogenase-like flavoprotein n=2 Tax=Azoarcus TaxID=12960 RepID=A0A4R6E6C0_9RHOO)

HSP 1 Score: 676 bits (1744), Expect = 1.490e-241
Identity = 311/403 (77.17%), Postives = 352/403 (87.34%), Query Frame = 1
Query:    1 ANELCQKGIKVVLLEAGAEQSTGKYLNDEWASFQQLAWTDMRTTSGNWRLAKDFPNLPTWICKTVGGTTTHWAGASLRFHEHDFRARTTYGVIDGANLLDWPITLADLEPYYARAEDKLGVTRTNDIPGLPGNNNFKVFYNGAQKLGYKDCHTGRMAINSRPRAGRTSCRQLGFCFQGCKMGAKWSTLYTEIPAAMATGKLELRTQCHVSSIEHDDKGRVTGVVYFDAAGKEQRQRARVVCVAGNSIETPRLLLLSASSKYPDGLANSSGQVGRNYMRHTTGSVYAAFDEPVHMYRGTTMAGIITDESHHKPERGFAGGYELETVSVGLPFAAAFIAPGEWGPDFAYFMDHYANLAGMWIVGEDMPQESNRVSLNSKVKDQWGLPVPHVHYDDHKNDVAMREH 1209
            ANELCQ+G+KVVLLEAG  QS G ++NDEWA+F QL W D RTTSG+WR+A+DFPNLP WICKTVGGTTTHWAGASLRF EH+FRAR+ YG + GANLLDWP+TL +LEPYYARAEDK+GVTRTNDIPGLPGNNNFKVFYNGA K+GY    TGRMAINS+PRA R SC+Q GFCFQGCK GAKWSTLYTEIPAA  TG+LELR  CHV+ IEHD  G+ TGVVYFDA GKEQRQ+ARVVCVAGN+IETPRLLL+SAS+K+PDGLANSSGQVGRNYMRHTTGSVYA F++PVHMYRGTTMAGI+ DE+H   +RGF GGYELET+S+GLPF AAF+ PG WG  FA  MD+Y N+AG+WIVGEDMPQESNR++L++  KDQWGLPVP VHYDDH ND+AMR H
Sbjct:   25 ANELCQQGVKVVLLEAGRRQSIGTFINDEWAAFSQLTWNDKRTTSGSWRVARDFPNLPAWICKTVGGTTTHWAGASLRFQEHEFRARSVYGGLAGANLLDWPLTLQELEPYYARAEDKMGVTRTNDIPGLPGNNNFKVFYNGATKIGY-GATTGRMAINSQPRANRASCQQFGFCFQGCKTGAKWSTLYTEIPAAEETGRLELREGCHVARIEHDAAGKATGVVYFDANGKEQRQKARVVCVAGNAIETPRLLLMSASAKFPDGLANSSGQVGRNYMRHTTGSVYATFEQPVHMYRGTTMAGIVQDEAHLDTKRGFVGGYELETLSLGLPFMAAFLDPGGWGKGFAEAMDNYVNMAGLWIVGEDMPQESNRITLHATEKDQWGLPVPDVHYDDHPNDIAMRRH 426          
BLAST of mRNA_P-wetherbeei_contig20643.1.1 vs. uniprot
Match: A0A1G8M4Q4_9PSED (Choline dehydrogenase n=6 Tax=cellular organisms TaxID=131567 RepID=A0A1G8M4Q4_9PSED)

HSP 1 Score: 674 bits (1738), Expect = 1.260e-240
Identity = 310/403 (76.92%), Postives = 351/403 (87.10%), Query Frame = 1
Query:    1 ANELCQKGIKVVLLEAGAEQSTGKYLNDEWASFQQLAWTDMRTTSGNWRLAKDFPNLPTWICKTVGGTTTHWAGASLRFHEHDFRARTTYGVIDGANLLDWPITLADLEPYYARAEDKLGVTRTNDIPGLPGNNNFKVFYNGAQKLGYKDCHTGRMAINSRPRAGRTSCRQLGFCFQGCKMGAKWSTLYTEIPAAMATGKLELRTQCHVSSIEHDDKGRVTGVVYFDAAGKEQRQRARVVCVAGNSIETPRLLLLSASSKYPDGLANSSGQVGRNYMRHTTGSVYAAFDEPVHMYRGTTMAGIITDESHHKPERGFAGGYELETVSVGLPFAAAFIAPGEWGPDFAYFMDHYANLAGMWIVGEDMPQESNRVSLNSKVKDQWGLPVPHVHYDDHKNDVAMREH 1209
            ANELCQKG+ VVLLEAGA QS G ++NDEW SF QLAW D RTTSG+WR+AKDFPNLP WICKTVGGTTTHWAGASLRF EH+FRA  TYG ++GANLL+WP+TLA+LEPYYARAEDK+GVTRTN+I GLPGNNNFKV YNGAQK+GYK+C TG MAINS PRAGR  C+QLGFCFQGCKMGAKWSTLYTEIPAA ATGKLELR QCHV+ IEHDDKGR + VVYFDA GKEQRQ+ARVV VAGNSIETPRLLL S+SS++P+GLAN SG VG++YMRHTTGSV+A+F+E VH YRGT MAG+I DE HHKP+RGF GGYE+ETVS+G  F AAF  PG WG +F   M+ Y+ LA MWIVGEDMPQESNR++LN  VKD++GLPVP+VHYDDH ND+AMREH
Sbjct:   25 ANELCQKGVPVVLLEAGARQSPGTFINDEWPSFAQLAWGDTRTTSGSWRVAKDFPNLPAWICKTVGGTTTHWAGASLRFQEHEFRALDTYGKVEGANLLNWPVTLAELEPYYARAEDKMGVTRTNNIEGLPGNNNFKVMYNGAQKMGYKECSTGHMAINSAPRAGRAGCQQLGFCFQGCKMGAKWSTLYTEIPAAEATGKLELRAQCHVAKIEHDDKGRASAVVYFDAQGKEQRQKARVVAVAGNSIETPRLLLNSSSSQFPNGLANGSGMVGKHYMRHTTGSVFASFNEEVHFYRGTIMAGLIGDEIHHKPDRGFVGGYEMETVSLGPSFLAAFFNPGAWGREFTDVMEQYSKLAAMWIVGEDMPQESNRITLNDSVKDKYGLPVPNVHYDDHPNDLAMREH 427          
BLAST of mRNA_P-wetherbeei_contig20643.1.1 vs. uniprot
Match: C6BKS6_RALP1 (Gluconate 2-dehydrogenase (Acceptor) n=11 Tax=Bacteria TaxID=2 RepID=C6BKS6_RALP1)

HSP 1 Score: 669 bits (1726), Expect = 8.440e-239
Identity = 304/403 (75.43%), Postives = 348/403 (86.35%), Query Frame = 1
Query:    1 ANELCQKGIKVVLLEAGAEQSTGKYLNDEWASFQQLAWTDMRTTSGNWRLAKDFPNLPTWICKTVGGTTTHWAGASLRFHEHDFRARTTYGVIDGANLLDWPITLADLEPYYARAEDKLGVTRTNDIPGLPGNNNFKVFYNGAQKLGYKDCHTGRMAINSRPRAGRTSCRQLGFCFQGCKMGAKWSTLYTEIPAAMATGKLELRTQCHVSSIEHDDKGRVTGVVYFDAAGKEQRQRARVVCVAGNSIETPRLLLLSASSKYPDGLANSSGQVGRNYMRHTTGSVYAAFDEPVHMYRGTTMAGIITDESHHKPERGFAGGYELETVSVGLPFAAAFIAPGEWGPDFAYFMDHYANLAGMWIVGEDMPQESNRVSLNSKVKDQWGLPVPHVHYDDHKNDVAMREH 1209
            ANELCQKGIKVV+LEAG +QS   ++NDEW +F QLAW D RTTSG+WR+AKDF  LP WICKTVGGT+THWAGASLRF EH+F+ART YG + GANLLDWP+TL +LEPYYA+AEDK+GVTRTN IPGLPGNNNFKV YNGA +LGYK+ HTG MAINS+PR GR  C QLGFCF+GCK GAKWSTLYTE+P A ATG  ELRTQ HV+ IEHDDKGRV  V+Y D  GKEQRQ+AR+VCVAGNSIETPRLLLLSAS+ + DGLANSSGQVGRNYMRH TGSVYAAF EPVHMYRGTTMAGI+ DE+ H   RGF GGYELET+S+G+PF AAF+ PG WG DFA++MDHY NLAGMW+VGEDMP+E+NRV+LN+ VKDQWG  VP+VH+DDH+ND+AMR+H
Sbjct:   25 ANELCQKGIKVVVLEAGGKQSNASFINDEWKAFSQLAWLDKRTTSGSWRIAKDFAELPAWICKTVGGTSTHWAGASLRFQEHEFQARTLYGDLKGANLLDWPLTLKELEPYYAKAEDKMGVTRTNGIPGLPGNNNFKVMYNGATRLGYKEVHTGNMAINSKPRKGRARCMQLGFCFEGCKSGAKWSTLYTELPEADATGNFELRTQAHVTRIEHDDKGRVNAVIYMDKDGKEQRQKARIVCVAGNSIETPRLLLLSASNMFKDGLANSSGQVGRNYMRHMTGSVYAAFKEPVHMYRGTTMAGIVRDEARHDTRRGFVGGYELETLSLGIPFMAAFLNPGGWGSDFAWWMDHYTNLAGMWLVGEDMPRETNRVTLNTNVKDQWGNYVPNVHFDDHENDIAMRKH 427          
BLAST of mRNA_P-wetherbeei_contig20643.1.1 vs. uniprot
Match: A0A1B3LU37_9BURK (GMC oxidoreductase family protein n=6 Tax=Burkholderiales TaxID=80840 RepID=A0A1B3LU37_9BURK)

HSP 1 Score: 667 bits (1721), Expect = 4.860e-238
Identity = 310/403 (76.92%), Postives = 345/403 (85.61%), Query Frame = 1
Query:    1 ANELCQKGIKVVLLEAGAEQSTGKYLNDEWASFQQLAWTDMRTTSGNWRLAKDFPNLPTWICKTVGGTTTHWAGASLRFHEHDFRARTTYGVIDGANLLDWPITLADLEPYYARAEDKLGVTRTNDIPGLPGNNNFKVFYNGAQKLGYKDCHTGRMAINSRPRAGRTSCRQLGFCFQGCKMGAKWSTLYTEIPAAMATGKLELRTQCHVSSIEHDDKGRVTGVVYFDAAGKEQRQRARVVCVAGNSIETPRLLLLSASSKYPDGLANSSGQVGRNYMRHTTGSVYAAFDEPVHMYRGTTMAGIITDESHHKPERGFAGGYELETVSVGLPFAAAFIAPGEWGPDFAYFMDHYANLAGMWIVGEDMPQESNRVSLNSKVKDQWGLPVPHVHYDDHKNDVAMREH 1209
            ANELCQKGIKVV+LEAGA QS   ++NDEW SF QLAW D RTTSG+WR+AKDF  LP WICKTVGGTTTHWAGASLRF EH+FR +T YG I GANLLDWPITL DLEPYYA+AEDK+GVTRTN IPGLPGNNNFKV YNGA KLGYKD HTG MAINS+PR GR  C QLGFCFQGCK GAKWSTLYTE+P A ATG  ELRT+ HV+ IEH+  G+VTGVVYFD   KEQRQ+AR+VCVAGNSIETPRLLLLSASS + DGLANSSGQVGRNYMRH TGSVYAAF EPVHMYRGTTMAGI+ DE+ H  +RGFAGGYELET+S+G+PF AAF+ PG WG DFA++M+ Y  LAGMW+VGEDMP+E+NRV+LN KVKDQWG  VP+VH+DDH ND+AMR H
Sbjct:   25 ANELCQKGIKVVVLEAGAAQSNASFINDEWKSFSQLAWLDTRTTSGSWRVAKDFAGLPAWICKTVGGTTTHWAGASLRFQEHEFRTKTVYGEIKGANLLDWPITLKDLEPYYAKAEDKMGVTRTNGIPGLPGNNNFKVMYNGASKLGYKDVHTGNMAINSQPRDGRGRCLQLGFCFQGCKSGAKWSTLYTELPKADATGNFELRTEAHVTRIEHNPAGKVTGVVYFDKDKKEQRQKARIVCVAGNSIETPRLLLLSASSLFKDGLANSSGQVGRNYMRHMTGSVYAAFKEPVHMYRGTTMAGIVRDEAKHDTKRGFAGGYELETLSLGVPFMAAFLNPGGWGADFAWWMERYTQLAGMWLVGEDMPRETNRVTLNDKVKDQWGNYVPNVHFDDHDNDIAMRNH 427          
BLAST of mRNA_P-wetherbeei_contig20643.1.1 vs. uniprot
Match: UPI001ADF308A (GMC family oxidoreductase n=1 Tax=Rhizobacter sp. AJA081-3 TaxID=2753607 RepID=UPI001ADF308A)

HSP 1 Score: 666 bits (1719), Expect = 9.800e-238
Identity = 305/403 (75.68%), Postives = 348/403 (86.35%), Query Frame = 1
Query:    1 ANELCQKGIKVVLLEAGAEQSTGKYLNDEWASFQQLAWTDMRTTSGNWRLAKDFPNLPTWICKTVGGTTTHWAGASLRFHEHDFRARTTYGVIDGANLLDWPITLADLEPYYARAEDKLGVTRTNDIPGLPGNNNFKVFYNGAQKLGYKDCHTGRMAINSRPRAGRTSCRQLGFCFQGCKMGAKWSTLYTEIPAAMATGKLELRTQCHVSSIEHDDKGRVTGVVYFDAAGKEQRQRARVVCVAGNSIETPRLLLLSASSKYPDGLANSSGQVGRNYMRHTTGSVYAAFDEPVHMYRGTTMAGIITDESHHKPERGFAGGYELETVSVGLPFAAAFIAPGEWGPDFAYFMDHYANLAGMWIVGEDMPQESNRVSLNSKVKDQWGLPVPHVHYDDHKNDVAMREH 1209
            ANELCQKGIKVV+LEAGA QS   ++NDEW SF QLAW D RTTSGNWR+AKDF  LP WICKTVGGTTTHWAGASLR  EH+FR +T YG I GANL+DWP+TL +LEPYYARAEDK+GVTRT  IPGLPGNNNFKV Y+GA+KLGY+D HTG MAINS+PR GR  C QLGFCFQGCK GAKWSTLYTE+P A +TG L+LR + HVS IEHDDKG+VTGVVYFD AGKEQRQ+AR+VCVAGNSIETPRLLLLSAS+ + DGLANSSGQVGRNYMRH TGSVYAAF  PV+MYRGTTMAGII DE+ H P+RGFAGGYE+ET+++G+PF AAF+ PG WG DFA++MDHY + AGMW+VGEDMP+E NR++LNS VKD+WGL  P+VH+DDH ND+AMR H
Sbjct:   25 ANELCQKGIKVVVLEAGAVQSPQSFINDEWKSFGQLAWLDPRTTSGNWRVAKDFAGLPAWICKTVGGTTTHWAGASLRLQEHEFRVKTHYGEIKGANLMDWPVTLKELEPYYARAEDKMGVTRTTGIPGLPGNNNFKVMYSGAKKLGYQDVHTGNMAINSQPRDGRGRCLQLGFCFQGCKSGAKWSTLYTELPKAESTGNLDLRPESHVSKIEHDDKGKVTGVVYFDKAGKEQRQKARIVCVAGNSIETPRLLLLSASAMFKDGLANSSGQVGRNYMRHMTGSVYAAFKNPVNMYRGTTMAGIIRDEASHNPKRGFAGGYEMETLALGVPFMAAFLDPGAWGEDFAWWMDHYTHTAGMWLVGEDMPREGNRITLNSNVKDKWGLAAPNVHFDDHDNDIAMRNH 427          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20643.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A1K4U0_AZOSB2.460e-24779.16Putative glucose dehydrogenase alpha subunit n=2 T... [more]
A0A5E4XWX2_9BURK5.970e-24678.662-keto-gluconate dehydrogenase n=3 Tax=Burkholderi... [more]
A0A069PR81_9BURK2.420e-24578.412-keto-gluconate dehydrogenase n=3 Tax=Caballeroni... [more]
A0A317MU64_9GAMM4.890e-24579.16Choline dehydrogenase-like flavoprotein n=1 Tax=Pl... [more]
A0A6G8NS51_9BURK1.090e-24177.672-methyl-1,2-propanediol dehydrogenase n=14 Tax=Bu... [more]
A0A4R6E6C0_9RHOO1.490e-24177.17Choline dehydrogenase-like flavoprotein n=2 Tax=Az... [more]
A0A1G8M4Q4_9PSED1.260e-24076.92Choline dehydrogenase n=6 Tax=cellular organisms T... [more]
C6BKS6_RALP18.440e-23975.43Gluconate 2-dehydrogenase (Acceptor) n=11 Tax=Bact... [more]
A0A1B3LU37_9BURK4.860e-23876.92GMC oxidoreductase family protein n=6 Tax=Burkhold... [more]
UPI001ADF308A9.800e-23875.68GMC family oxidoreductase n=1 Tax=Rhizobacter sp. ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20643contigP-wetherbeei_contig20643:3..1211 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog62928.azo1228
PFAMsGMC_oxred_C,GMC_oxred_N,NAD_binding_8
Model size1209
Max annot lvl28216|Betaproteobacteria
KEGG rclassRC00146
KEGG koko:K03333
KEGG ReactionR01459
KEGG Pathwayko00984,ko01120,map00984,map01120
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.03e-248
EggNOG OGsCOG2303@1|root,COG2303@2|Bacteria,1MU3F@1224|Proteobacteria,2VIBA@28216|Betaproteobacteria
EC1.1.3.6
DescriptionPFAM glucose-methanol-choline oxidoreductase
Cds size1209
COG categoryE
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186205.3521423-CDS-P-wetherbeei_contig20643:2..12111683186205.3521423-CDS-P-wetherbeei_contig20643:2..1211Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20643 3..1211 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20643.1.1prot_P-wetherbeei_contig20643.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20643 3..1211 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20643.1.1

>prot_P-wetherbeei_contig20643.1.1 ID=prot_P-wetherbeei_contig20643.1.1|Name=mRNA_P-wetherbeei_contig20643.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=403bp
ANELCQKGIKVVLLEAGAEQSTGKYLNDEWASFQQLAWTDMRTTSGNWRL
AKDFPNLPTWICKTVGGTTTHWAGASLRFHEHDFRARTTYGVIDGANLLD
WPITLADLEPYYARAEDKLGVTRTNDIPGLPGNNNFKVFYNGAQKLGYKD
CHTGRMAINSRPRAGRTSCRQLGFCFQGCKMGAKWSTLYTEIPAAMATGK
LELRTQCHVSSIEHDDKGRVTGVVYFDAAGKEQRQRARVVCVAGNSIETP
RLLLLSASSKYPDGLANSSGQVGRNYMRHTTGSVYAAFDEPVHMYRGTTM
AGIITDESHHKPERGFAGGYELETVSVGLPFAAAFIAPGEWGPDFAYFMD
HYANLAGMWIVGEDMPQESNRVSLNSKVKDQWGLPVPHVHYDDHKNDVAM
REH
back to top

mRNA from alignment at P-wetherbeei_contig20643:3..1211+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20643.1.1 ID=mRNA_P-wetherbeei_contig20643.1.1|Name=mRNA_P-wetherbeei_contig20643.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1209bp|location=Sequence derived from alignment at P-wetherbeei_contig20643:3..1211+ (Phaeothamnion wetherbeei SAG_119_79)
GCCAACGAGCTGTGTCAGAAGGGCATCAAGGTCGTGCTGCTGGAAGCCGG TGCCGAGCAATCCACCGGCAAATACCTCAACGACGAGTGGGCCTCGTTCC AGCAACTGGCCTGGACCGATATGCGTACCACTTCGGGAAATTGGCGTCTG GCCAAGGACTTCCCCAACCTGCCCACCTGGATCTGCAAAACCGTCGGCGG CACCACCACCCACTGGGCCGGTGCATCGCTGCGCTTTCACGAGCATGACT TCCGTGCGCGCACCACCTACGGGGTCATCGATGGCGCCAATCTGCTCGAC TGGCCGATCACGCTCGCGGATCTCGAACCCTATTACGCGCGCGCCGAAGA CAAGCTGGGTGTCACGCGTACCAACGACATTCCGGGCTTGCCGGGCAACA ATAATTTCAAAGTCTTCTATAACGGTGCGCAGAAGCTTGGCTACAAGGAT TGCCATACCGGGCGTATGGCGATCAATAGCCGTCCGCGTGCTGGGCGTAC GTCCTGTCGACAACTCGGCTTCTGCTTCCAGGGTTGCAAGATGGGTGCGA AGTGGTCGACGCTTTACACCGAGATCCCGGCGGCGATGGCTACCGGCAAG CTTGAGCTTCGTACCCAGTGTCATGTATCGAGCATCGAGCACGACGATAA AGGTCGCGTCACTGGCGTGGTCTATTTCGATGCGGCCGGCAAGGAACAGC GCCAGCGCGCGCGCGTGGTGTGCGTGGCAGGCAATTCCATCGAGACGCCG CGTTTGTTATTGCTGTCGGCTTCGTCGAAGTATCCCGACGGCCTGGCCAA CTCCTCGGGCCAGGTCGGCCGCAATTACATGCGCCACACTACCGGTTCGG TGTACGCGGCTTTTGACGAGCCGGTGCACATGTACCGTGGCACGACCATG GCGGGCATCATCACCGACGAATCGCATCACAAACCTGAACGCGGCTTTGC CGGTGGCTATGAACTCGAGACCGTGTCGGTTGGCCTGCCCTTCGCGGCGG CCTTCATCGCACCCGGTGAGTGGGGCCCGGATTTTGCCTATTTCATGGAC CACTACGCGAATCTGGCCGGCATGTGGATAGTCGGCGAAGACATGCCCCA GGAAAGCAATCGCGTGAGCTTGAACAGTAAGGTCAAGGATCAGTGGGGCC TGCCGGTGCCGCACGTGCACTACGACGATCACAAGAACGACGTCGCCATG CGTGAGCAT
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig20643:3..1211+

>mRNA_P-wetherbeei_contig20643.1.1 ID=mRNA_P-wetherbeei_contig20643.1.1|Name=mRNA_P-wetherbeei_contig20643.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1209bp|location=Sequence derived from alignment at P-wetherbeei_contig20643:3..1211+ (Phaeothamnion wetherbeei SAG_119_79)
GCCAACGAGCTGTGTCAGAAGGGCATCAAGGTCGTGCTGCTGGAAGCCGG
TGCCGAGCAATCCACCGGCAAATACCTCAACGACGAGTGGGCCTCGTTCC
AGCAACTGGCCTGGACCGATATGCGTACCACTTCGGGAAATTGGCGTCTG
GCCAAGGACTTCCCCAACCTGCCCACCTGGATCTGCAAAACCGTCGGCGG
CACCACCACCCACTGGGCCGGTGCATCGCTGCGCTTTCACGAGCATGACT
TCCGTGCGCGCACCACCTACGGGGTCATCGATGGCGCCAATCTGCTCGAC
TGGCCGATCACGCTCGCGGATCTCGAACCCTATTACGCGCGCGCCGAAGA
CAAGCTGGGTGTCACGCGTACCAACGACATTCCGGGCTTGCCGGGCAACA
ATAATTTCAAAGTCTTCTATAACGGTGCGCAGAAGCTTGGCTACAAGGAT
TGCCATACCGGGCGTATGGCGATCAATAGCCGTCCGCGTGCTGGGCGTAC
GTCCTGTCGACAACTCGGCTTCTGCTTCCAGGGTTGCAAGATGGGTGCGA
AGTGGTCGACGCTTTACACCGAGATCCCGGCGGCGATGGCTACCGGCAAG
CTTGAGCTTCGTACCCAGTGTCATGTATCGAGCATCGAGCACGACGATAA
AGGTCGCGTCACTGGCGTGGTCTATTTCGATGCGGCCGGCAAGGAACAGC
GCCAGCGCGCGCGCGTGGTGTGCGTGGCAGGCAATTCCATCGAGACGCCG
CGTTTGTTATTGCTGTCGGCTTCGTCGAAGTATCCCGACGGCCTGGCCAA
CTCCTCGGGCCAGGTCGGCCGCAATTACATGCGCCACACTACCGGTTCGG
TGTACGCGGCTTTTGACGAGCCGGTGCACATGTACCGTGGCACGACCATG
GCGGGCATCATCACCGACGAATCGCATCACAAACCTGAACGCGGCTTTGC
CGGTGGCTATGAACTCGAGACCGTGTCGGTTGGCCTGCCCTTCGCGGCGG
CCTTCATCGCACCCGGTGAGTGGGGCCCGGATTTTGCCTATTTCATGGAC
CACTACGCGAATCTGGCCGGCATGTGGATAGTCGGCGAAGACATGCCCCA
GGAAAGCAATCGCGTGAGCTTGAACAGTAAGGTCAAGGATCAGTGGGGCC
TGCCGGTGCCGCACGTGCACTACGACGATCACAAGAACGACGTCGCCATG
CGTGAGCAT
back to top