mRNA_P-wetherbeei_contig20639.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20639.1.1
Unique NamemRNA_P-wetherbeei_contig20639.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20639.1.1 vs. uniprot
Match: A0A1H8NQP5_9PROT (NADPH2:quinone reductase n=5 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H8NQP5_9PROT)

HSP 1 Score: 147 bits (371), Expect = 7.590e-42
Identity = 74/76 (97.37%), Postives = 74/76 (97.37%), Query Frame = 1
Query:    1 DLHALKRIDYIGVTFRTRSPEEVRDIVKAARADLWPAIEAGKLSLPIDKTFPLAQAVEALAHMKANAHFGKIVLVV 228
            DLHALKRIDYIGVTFRTRSPEEVR IVKAARADLWPAIEAGKLSLPIDKTFPLAQA EALAHMKANAHFGKIVLVV
Sbjct:  248 DLHALKRIDYIGVTFRTRSPEEVRAIVKAARADLWPAIEAGKLSLPIDKTFPLAQAAEALAHMKANAHFGKIVLVV 323          
BLAST of mRNA_P-wetherbeei_contig20639.1.1 vs. uniprot
Match: A0A521RKS2_9HYPH (Quinone oxidoreductase (Fragment) n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521RKS2_9HYPH)

HSP 1 Score: 139 bits (351), Expect = 7.990e-42
Identity = 69/76 (90.79%), Postives = 71/76 (93.42%), Query Frame = 1
Query:    1 DLHALKRIDYIGVTFRTRSPEEVRDIVKAARADLWPAIEAGKLSLPIDKTFPLAQAVEALAHMKANAHFGKIVLVV 228
            DLHALKRIDYIGVTFRTRSPEEVRDIV AAR DLWPAIE GKLSLPIDKTFPL++A  ALAHMKANAHFGKIVLVV
Sbjct:    1 DLHALKRIDYIGVTFRTRSPEEVRDIVHAARRDLWPAIEEGKLSLPIDKTFPLSEAAAALAHMKANAHFGKIVLVV 76          
BLAST of mRNA_P-wetherbeei_contig20639.1.1 vs. uniprot
Match: A0A512NCV8_9HYPH (Quinone oxidoreductase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A512NCV8_9HYPH)

HSP 1 Score: 143 bits (361), Expect = 2.370e-40
Identity = 71/76 (93.42%), Postives = 73/76 (96.05%), Query Frame = 1
Query:    1 DLHALKRIDYIGVTFRTRSPEEVRDIVKAARADLWPAIEAGKLSLPIDKTFPLAQAVEALAHMKANAHFGKIVLVV 228
            DLHALKRIDYIGVTFRTR PEEVR IVKAARADLWPAIEAGKLSLPID+TFPL+QA EALAHMKANAHFGKIVLVV
Sbjct:  248 DLHALKRIDYIGVTFRTRGPEEVRAIVKAARADLWPAIEAGKLSLPIDRTFPLSQAAEALAHMKANAHFGKIVLVV 323          
BLAST of mRNA_P-wetherbeei_contig20639.1.1 vs. uniprot
Match: A0A1T4S8I0_9HYPH (NADPH2:quinone reductase n=1 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4S8I0_9HYPH)

HSP 1 Score: 142 bits (359), Expect = 4.720e-40
Identity = 71/76 (93.42%), Postives = 73/76 (96.05%), Query Frame = 1
Query:    1 DLHALKRIDYIGVTFRTRSPEEVRDIVKAARADLWPAIEAGKLSLPIDKTFPLAQAVEALAHMKANAHFGKIVLVV 228
            DLHALKRIDYIGVTFRTRSPEEVR IV+AAR DLWPAIEAGKLSLPIDKTFPLAQA +ALAHMKANAHFGKIVLVV
Sbjct:  248 DLHALKRIDYIGVTFRTRSPEEVRAIVQAARKDLWPAIEAGKLSLPIDKTFPLAQAADALAHMKANAHFGKIVLVV 323          
BLAST of mRNA_P-wetherbeei_contig20639.1.1 vs. uniprot
Match: A0A259MD52_9PROT (Quinone oxidoreductase n=6 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A259MD52_9PROT)

HSP 1 Score: 140 bits (352), Expect = 5.240e-39
Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = 1
Query:    1 DLHALKRIDYIGVTFRTRSPEEVRDIVKAARADLWPAIEAGKLSLPIDKTFPLAQAVEALAHMKANAHFGKIVLVV 228
            DLHALKRIDYIGVTFRTRSPEEVRDIV+AAR DLWPAIE GKLSLPIDKTFPL++A  ALAHMKANAHFGKIVLVV
Sbjct:  248 DLHALKRIDYIGVTFRTRSPEEVRDIVQAARKDLWPAIEDGKLSLPIDKTFPLSEAAAALAHMKANAHFGKIVLVV 323          
BLAST of mRNA_P-wetherbeei_contig20639.1.1 vs. uniprot
Match: A0A5C8P880_9HYPH (Zinc-binding dehydrogenase n=1 Tax=Vineibacter terrae TaxID=2586908 RepID=A0A5C8P880_9HYPH)

HSP 1 Score: 129 bits (323), Expect = 1.090e-34
Identity = 60/74 (81.08%), Postives = 68/74 (91.89%), Query Frame = 1
Query:    1 DLHALKRIDYIGVTFRTRSPEEVRDIVKAARADLWPAIEAGKLSLPIDKTFPLAQAVEALAHMKANAHFGKIVL 222
            DLHALKRIDY+GVTFRTRSPEEVR+I +  RADLWPA+EAG+LSLPID++FPL Q  EALAHM+ANAHFGKIVL
Sbjct:  248 DLHALKRIDYVGVTFRTRSPEEVREINRLMRADLWPAVEAGRLSLPIDRSFPLDQVAEALAHMRANAHFGKIVL 321          
BLAST of mRNA_P-wetherbeei_contig20639.1.1 vs. uniprot
Match: A0A5C5SGZ2_9HYPH (Zinc-binding dehydrogenase n=1 Tax=Reyranella sp. CPCC 100927 TaxID=2599616 RepID=A0A5C5SGZ2_9HYPH)

HSP 1 Score: 127 bits (318), Expect = 6.040e-34
Identity = 61/74 (82.43%), Postives = 67/74 (90.54%), Query Frame = 1
Query:    1 DLHALKRIDYIGVTFRTRSPEEVRDIVKAARADLWPAIEAGKLSLPIDKTFPLAQAVEALAHMKANAHFGKIVL 222
            DLHALKRIDYIGVTFRTRSPEEV +I +  RADLWPA+EAG+LSLPID+TFPL Q  EALAHM+ANAHFGKIVL
Sbjct:  248 DLHALKRIDYIGVTFRTRSPEEVAEINRLMRADLWPALEAGQLSLPIDRTFPLDQVSEALAHMRANAHFGKIVL 321          
BLAST of mRNA_P-wetherbeei_contig20639.1.1 vs. uniprot
Match: A0A7C2LQU9_9HYPH (Quinone oxidoreductase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2LQU9_9HYPH)

HSP 1 Score: 123 bits (308), Expect = 1.840e-32
Identity = 58/76 (76.32%), Postives = 67/76 (88.16%), Query Frame = 1
Query:    1 DLHALKRIDYIGVTFRTRSPEEVRDIVKAARADLWPAIEAGKLSLPIDKTFPLAQAVEALAHMKANAHFGKIVLVV 228
            DLHA+KRIDYIGVTFRTRS EEVR+I +  RADLW A+EAG+L LPID+TFPL +A +ALAHM+ANAHFGKIVL V
Sbjct:  248 DLHAMKRIDYIGVTFRTRSVEEVREITRLMRADLWEAVEAGRLRLPIDRTFPLEKAADALAHMRANAHFGKIVLTV 323          
BLAST of mRNA_P-wetherbeei_contig20639.1.1 vs. uniprot
Match: UPI001CFE8BC5 (zinc-binding dehydrogenase n=1 Tax=Roseicella sp. GB24 TaxID=2883479 RepID=UPI001CFE8BC5)

HSP 1 Score: 122 bits (306), Expect = 3.710e-32
Identity = 59/74 (79.73%), Postives = 66/74 (89.19%), Query Frame = 1
Query:    1 DLHALKRIDYIGVTFRTRSPEEVRDIVKAARADLWPAIEAGKLSLPIDKTFPLAQAVEALAHMKANAHFGKIVL 222
            DLHA++RI YIGVTFRTRS EEVR+I +  RADLW A+EAGKL LPID+TFPLA+A EALAHMKANAHFGKIVL
Sbjct:  249 DLHAMRRISYIGVTFRTRSLEEVREINRRMRADLWGAVEAGKLRLPIDRTFPLAEAAEALAHMKANAHFGKIVL 322          
BLAST of mRNA_P-wetherbeei_contig20639.1.1 vs. uniprot
Match: UPI00131C11FD (zinc-binding dehydrogenase n=1 Tax=Acidisphaera sp. L21 TaxID=1641851 RepID=UPI00131C11FD)

HSP 1 Score: 114 bits (284), Expect = 2.440e-31
Identity = 56/76 (73.68%), Postives = 62/76 (81.58%), Query Frame = 1
Query:    1 DLHALKRIDYIGVTFRTRSPEEVRDIVKAARADLWPAIEAGKLSLPIDKTFPLAQAVEALAHMKANAHFGKIVLVV 228
            DLHA +RI YIGVTFRTRS EEVR+I +  RADLW A+EAGKL LPID+ FPL QA EA AHM+AN HFGKIVL V
Sbjct:   22 DLHAARRISYIGVTFRTRSIEEVREINRVMRADLWEAVEAGKLRLPIDRVFPLEQANEAQAHMRANQHFGKIVLTV 97          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20639.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1H8NQP5_9PROT7.590e-4297.37NADPH2:quinone reductase n=5 Tax=Alphaproteobacter... [more]
A0A521RKS2_9HYPH7.990e-4290.79Quinone oxidoreductase (Fragment) n=1 Tax=Reyranel... [more]
A0A512NCV8_9HYPH2.370e-4093.42Quinone oxidoreductase n=2 Tax=Alphaproteobacteria... [more]
A0A1T4S8I0_9HYPH4.720e-4093.42NADPH2:quinone reductase n=1 Tax=Enhydrobacter aer... [more]
A0A259MD52_9PROT5.240e-3990.79Quinone oxidoreductase n=6 Tax=Alphaproteobacteria... [more]
A0A5C8P880_9HYPH1.090e-3481.08Zinc-binding dehydrogenase n=1 Tax=Vineibacter ter... [more]
A0A5C5SGZ2_9HYPH6.040e-3482.43Zinc-binding dehydrogenase n=1 Tax=Reyranella sp. ... [more]
A0A7C2LQU9_9HYPH1.840e-3276.32Quinone oxidoreductase n=1 Tax=Hyphomicrobiales ba... [more]
UPI001CFE8BC53.710e-3279.73zinc-binding dehydrogenase n=1 Tax=Roseicella sp. ... [more]
UPI00131C11FD2.440e-3173.68zinc-binding dehydrogenase n=1 Tax=Acidisphaera sp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20639contigP-wetherbeei_contig20639:20..250 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1205680.CAKO01000002_gene2645
Preferred nameMA20_15185
PFAMsADH_N,ADH_zinc_N
Model size231
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K00344
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.39e-39
EggNOG OGsCOG0604@1|root,COG0604@2|Bacteria,1MX8A@1224|Proteobacteria,2TVPQ@28211|Alphaproteobacteria
EC1.6.5.5
DescriptionZinc-binding dehydrogenase
Cds size231
COG categoryC
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186205.1852987-CDS-P-wetherbeei_contig20639:19..2501683186205.1852987-CDS-P-wetherbeei_contig20639:19..250Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20639 20..250 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20639.1.1prot_P-wetherbeei_contig20639.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20639 20..250 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20639.1.1

>prot_P-wetherbeei_contig20639.1.1 ID=prot_P-wetherbeei_contig20639.1.1|Name=mRNA_P-wetherbeei_contig20639.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=77bp
DLHALKRIDYIGVTFRTRSPEEVRDIVKAARADLWPAIEAGKLSLPIDKT
FPLAQAVEALAHMKANAHFGKIVLVV*
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mRNA from alignment at P-wetherbeei_contig20639:20..250+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20639.1.1 ID=mRNA_P-wetherbeei_contig20639.1.1|Name=mRNA_P-wetherbeei_contig20639.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=231bp|location=Sequence derived from alignment at P-wetherbeei_contig20639:20..250+ (Phaeothamnion wetherbeei SAG_119_79)
GACCTGCATGCGCTGAAGCGCATCGACTATATCGGCGTCACCTTCCGGAC CCGCAGCCCCGAGGAAGTGCGCGATATCGTGAAGGCGGCCCGGGCCGACC TGTGGCCGGCGATCGAGGCGGGCAAGCTCAGCCTGCCGATTGACAAGACC TTCCCGCTCGCCCAGGCGGTCGAGGCGCTTGCGCACATGAAGGCCAATGC CCATTTTGGCAAGATCGTCCTGGTCGTCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20639:20..250+

>mRNA_P-wetherbeei_contig20639.1.1 ID=mRNA_P-wetherbeei_contig20639.1.1|Name=mRNA_P-wetherbeei_contig20639.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=231bp|location=Sequence derived from alignment at P-wetherbeei_contig20639:20..250+ (Phaeothamnion wetherbeei SAG_119_79)
GACCTGCATGCGCTGAAGCGCATCGACTATATCGGCGTCACCTTCCGGAC
CCGCAGCCCCGAGGAAGTGCGCGATATCGTGAAGGCGGCCCGGGCCGACC
TGTGGCCGGCGATCGAGGCGGGCAAGCTCAGCCTGCCGATTGACAAGACC
TTCCCGCTCGCCCAGGCGGTCGAGGCGCTTGCGCACATGAAGGCCAATGC
CCATTTTGGCAAGATCGTCCTGGTCGTCTGA
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