mRNA_P-wetherbeei_contig20631.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20631.1.1
Unique NamemRNA_P-wetherbeei_contig20631.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20631.1.1 vs. uniprot
Match: A0A536TJ67_9PROT (BTAD domain-containing protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536TJ67_9PROT)

HSP 1 Score: 209 bits (531), Expect = 4.380e-56
Identity = 142/413 (34.38%), Postives = 204/413 (49.39%), Query Frame = 1
Query:    1 PTITASMAESLTEDRSVLKLLDHLYRRHLFTSRRAGKEPVYQFHALFRAFLQHRAKTELDAGQQRHIATHAAQLLDAAGQFEDSMVLRLAAQDWTAAEELILTQARAFIAQGRWRNVVDWIGALPEQRVEQDCWLLHWLGTAWIGVDPARARSILERACQRATANSDVFCQVQTAAGMVEAYFLEYAVFTPLDRWIPVLERMFDSQICSMEPNAELRAQSAMLIALVYRMPDHKRIDQCVVRVDELLRTDADVNLRVTAATHLTLYGTFTGHLQVSRRAAVLLAPLLADPAVTVFRRIFAWAVIN-WYACNASDASLGEQAVASNLSIAREEGMHIAERFACILGFYLDMDQRRIDA----GRH-----RLERFEEIMLPEQPYEAASLVNMKAWFGVYTGDPAPPLTHGARA 1209
            P+IT S A +LT      +LLD+LYRRHLFT RR G E  Y +HALFR FL    +  L   +++    HAA+LL   GQ  D++ L   A++W A   LI   A  +  QGR + V DWI ALP    E D WL +W G AWI V P R R  LERA     A  D+  Q      +V  Y+ E+A F P+DRW+P  ER+   +   ++  +ELRA +A LIAL+ R P+ + I +C  R+DEL+  + DVN+RV AA+ L  Y  +    + +      + P+LA P VT   +++    ++ W+  N      GE            +   IAER+  +  +  ++D     A    G H     RLE  E  + P +  +     ++++      G P   L    RA
Sbjct:  276 PSITQSEAIALTGSEEAPRLLDYLYRRHLFTDRRRGAETSYHYHALFREFLLEEMRKRLPGAERQRATKHAAELLADRGQVSDALALFRDAREWEAMRSLIHANALEWARQGRAQAVSDWIEALPASMREADPWLEYWFGRAWIFVQPTRGRPALERAFAAFRAAGDLRGQALALNTIVTGYYYEWANFAPIDRWLPEFERLLAEEAPKLDRASELRAHAAWLIALLLRNPEDENISRCAQRLDELIDEENDVNVRVMAASALFNYINWKTEGESAAALVGRIEPILARPEVTPLMQVWWRTHLSFWHYVN---GRYGESTAVMT------DARAIAERYG-LEAYMFEIDHAEASALVNQGEHAAAKARLEAMERGLSPTRRMQWPYFHHVRSMLEQRLGQPEASLQDAERA 678          
BLAST of mRNA_P-wetherbeei_contig20631.1.1 vs. uniprot
Match: A0A1Q7VHP9_9PROT (BTAD domain-containing protein n=1 Tax=Betaproteobacteria bacterium 13_1_20CM_3_63_8 TaxID=1805040 RepID=A0A1Q7VHP9_9PROT)

HSP 1 Score: 204 bits (520), Expect = 1.270e-54
Identity = 118/302 (39.07%), Postives = 175/302 (57.95%), Query Frame = 1
Query:    1 PTITASMAESLTEDRSVLKLLDHLYRRHLFTSRRAGKEPVYQFHALFRAFLQHRAKTELDAGQQRHIATHAAQLLDAAGQFEDSMVLRLAAQDWTAAEELILTQARAFIAQGRWRNVVDWIGALPEQRVEQDCWLLHWLGTAWIGVDPARARSILERACQRATANSDVFCQVQTAAGMVEAYFLEYAVFTPLDRWIPVLERMFDS-QICSMEPNAELRAQSAMLIALVYRMPDHKRIDQCVVRVDELLRTDADVNLRVTAATHLTLYGTFTGHLQVSRRAAVL--LAPLLADPAVTVFRRIF 897
            P+IT S A +L+ +    +LL++L+RRHLFT RR G+E  Y +HALFR FL    +  L + +QR    HAA+LL   GQ  D++ L   A +W A   LI T A  +  QGR   + DWI ALP    E D WL +W G AWI V P R R  LERA +   A  D+  Q    + +V  Y+ E+A F PLDRW+P  ER+    Q   ++  +ELRA++A LIAL+ R P+ + +++C  R+D+L+  ++D+N+RV AA+  TL+       + +  AA++  + P+L    VT   +++
Sbjct:  276 PSITPSEAVALSGNEEAPRLLEYLFRRHLFTDRRRGEETSYHYHALFREFLLQELRKRLPSAEQRKSRVHAAELLAKRGQVSDALGLFRDAGEWEAMRSLIRTHALEWARQGRAPTLSDWIEALPSSMRESDPWLEYWFGRAWIFVQPQRGRPALERAFEAFRAGGDLRGQALALSTIVTGYYYEWANFAPLDRWLPEFERLLGGEQAADLDRESELRARAAWLIALLLRKPEDENLERCAQRLDQLIDGESDLNVRVMAAS--TLFNYINWKTKGASAAALVARIEPILGKAEVTPLMQVW 575          
BLAST of mRNA_P-wetherbeei_contig20631.1.1 vs. uniprot
Match: A0A536X535_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536X535_9PROT)

HSP 1 Score: 198 bits (503), Expect = 2.180e-52
Identity = 114/299 (38.13%), Postives = 171/299 (57.19%), Query Frame = 1
Query:    1 PTITASMAESLTEDRSVLKLLDHLYRRHLFTSRRAGKEPVYQFHALFRAFLQHRAKTELDAGQQRHIATHAAQLLDAAGQFEDSMVLRLAAQDWTAAEELILTQARAFIAQGRWRNVVDWIGALPEQRVEQDCWLLHWLGTAWIGVDPARARSILERACQRATANSDVFCQVQTAAGMVEAYFLEYAVFTPLDRWIPVLERMFDSQIC-SMEPNAELRAQSAMLIALVYRMPDHKRIDQCVVRVDELLRTDADVNLRVTAATHLTLYGTFTGHLQVSRRAAVLLAPLLADPAVTVFRRI 894
            P+IT + A +LT +    +LL++LYRRHLFT RR G+E  Y +HALFR FL    +  L   ++R  +  AA LL   GQ  D++ L   A +W     LI   A  +  QGR +++ DWI ALP    + D WL +W G AWI V P R R  +ERA +   A  D+  +    + MV +Y+ E+A F PL+ W+P  ER+ + +   +++  +ELRA+SA LIAL+ R P+ + ID+C  R+DEL+  ++D NLRV AA+ L  Y  +    + +      + P+LA P V+   ++
Sbjct:  276 PSITPADAIALTGNEEAPRLLEYLYRRHLFTDRRRGEELSYHYHALFREFLLEELRKRLPGDERRKASARAADLLAQRGQVSDALALFRDAGEWEPMRSLIRAHALEWARQGRAQSLSDWIEALPSNMRDSDPWLGYWFGRAWIFVQPQRGRPSIERAYEAFRAAGDLRGEALALSTMVTSYYYEWANFAPLEHWLPEFERLLNGKRTKALDHESELRARSAWLIALLLRKPEDENIDRCAQRLDELIDGESDRNLRVLAASTLFNYINWKTEGESAAALIARIEPVLATPDVSPLMQV 574          
BLAST of mRNA_P-wetherbeei_contig20631.1.1 vs. uniprot
Match: A0A6I6M3L5_9BURK (Uncharacterized protein n=2 Tax=Massilia flava TaxID=871742 RepID=A0A6I6M3L5_9BURK)

HSP 1 Score: 193 bits (491), Expect = 9.750e-51
Identity = 128/403 (31.76%), Postives = 193/403 (47.89%), Query Frame = 1
Query:    1 PTITASMAESLTEDRSVLKLLDHLYRRHLFTSRRAGKEPVYQFHALFRAFLQHRAKTELDAGQQRHIATHAAQLLDAAGQFEDSMVLRLAAQDWTAAEELILTQARAFIAQGRWRNVVDWIGALPEQRVEQDCWLLHWLGTAWIGVDPARARSILERACQRATANSDVFCQVQTAAGMVEAYFLEYAVFTPLDRWIPVLERMFDSQICSMEPNAELRAQSAMLIALVYRMPDHKRIDQCVVRVDELLRTDADVNLRVTAATHLTLYGTFTGHLQVSRRAAVLLAPLLADPAVTVFRRIFAWAVINWYACNASDASLGEQAVASNLSIAREEGMHIAERFACILGFYLDMDQRRIDAGRHRLERFEEIMLPEQPYEAASLVNMKAWFGVYTGDPAPPLTHGARA 1209
            P  T  MAE+++ D    + L  LYR   F  RR   E  YQ+HALFR FL  RA+  L   +   +   +A+LL+     E +  L +A++DW AA  ++  QA   I QGRW+    WIG LP   +E D WL  W G   +   PA AR+ LE+A     AN D+  QV  AA M+E Y+ E+  F PLDRWI +  ++F+  +    P  ELRA+SA++ AL+YR P +  +     R   LL  D  V  R+TA   L     F G    + R   LL P LAD  +T   R++    + +Y    ++   G  A+    +IA E G++           +L +    +      L R +  +   +  + A   + ++W+ + +G+    + HG  A
Sbjct:  259 PMFTVPMAEAISGDLEAGQRLGELYRLRYFIDRRDEPETTYQYHALFREFLNARAREYLQPPEYLLLQRRSARLLEIGNHTEQAFFLYVASEDWEAAGRMVRQQAPELIRQGRWQTAKRWIGMLPPALLEADPWLPFWDGACDVVTAPAHARAALEKAHAGLVANHDLLGQVMAAALMMETYYFEWTTFAPLDRWIDLQSKLFEEGVPFPSPAIELRARSALVAALLYRQPQNWLLRPESGRALALLEADVPVAARLTAGIILLNCYCFRGDFDCAERVIGLLRPDLADRELTPLNRVWWLIAVAYYHMLRAEHDAGADALDRAEAIACEHGLNFIRPTVLTQRAFLALSFGDLGCAGALLPRLKCAIDSTRRMDLALYHSAQSWYELQSGELTAAVKHGQAA 661          
BLAST of mRNA_P-wetherbeei_contig20631.1.1 vs. uniprot
Match: UPI001BE98450 (hypothetical protein n=2 Tax=Variovorax paradoxus TaxID=34073 RepID=UPI001BE98450)

HSP 1 Score: 177 bits (449), Expect = 3.920e-45
Identity = 128/371 (34.50%), Postives = 184/371 (49.60%), Query Frame = 1
Query:    1 PTITASMAESLTEDRSVLKLLDHLYRRHLFTSRRAGKEP----VYQFHALFRAFLQHRAKTELDAGQQRHIATHAAQLLDAAGQFEDSMVLRLAAQDWTAAEELILTQARAFIAQGRWRNVVDWIGALPEQRVEQDCWLLHWLGTAWIGVDPARARSILERACQRATANSDVFCQVQTAAGMVEAYFLEYAVFTPLDRWIPVLERMFDSQICSMEPNAELRAQSAMLIALVYRMPDHKRIDQCVVRVDELLRTDA-DVNLRVTAATHL-TLYGTFTGHLQVSRRAAVLLAPLLADPAVTVFRRIFAWAVINWYACNASDASLGEQAVASNLSIAREEGMHIAERFACILGFYLDMDQRRIDAGRHRLERFE 1095
            P IT  +AE LT    V +LLDH Y+RHLFT RR    P    V+QFHALFR FLQH+A+  LDAG+ R IA  A +LLDAAG +E +  L   A DW A   L++  A   + QGR + V+ WIG +P+   E+D WL +W G A +   P RA  + +   +R    +DV  Q+   A +V+  +     ++ +  W+  LE +    +       EL + SA+  AL +  P H  + +   ++ EL+   A D N R+T ATHL T + +   H    +  A + A + A PA +   R F +     +    +D             +AR EG+  AE  A     YLD+  RR    + RL R E
Sbjct:  278 PLITVDLAEQLTGMPEVGRLLDHHYKRHLFTDRRRIAAPAGAYVFQFHALFRTFLQHQARASLDAGEIRDIACRAGRLLDAAGHWEQAQALFAEAADWDAHAGLVVAHAEGLLEQGRRQTVLGWIGRMPDAVRERDPWLGYWEGRALMATAPERALQVFQARHRRFAEEADVVGQLACGAAIVQTLWHARLGWSEITPWVDRLEPLMREDLRFPTAAVELLSMSALHAALAFCRPGHPAVRRLGPKLLELIDDAAIDWNQRLTTATHLITYFHSAAEHELAMQLVAKVDAAVEALPA-SALNRAFWFVFRAMHDLRQADYEAAAARFQRAEDLARVEGLAHAEFAALQFRAYLDLSFRRTGVAQARLARME 647          
BLAST of mRNA_P-wetherbeei_contig20631.1.1 vs. uniprot
Match: A0A158DEL0_9BURK (ATP-dependent transcription regulator LuxR n=1 Tax=Caballeronia glebae TaxID=1777143 RepID=A0A158DEL0_9BURK)

HSP 1 Score: 168 bits (426), Expect = 4.260e-42
Identity = 102/264 (38.64%), Postives = 138/264 (52.27%), Query Frame = 1
Query:    1 PTITASMAESLTEDRSVLKLLDHLYRRHLFTSRRAGKEPVYQFHALFRAFLQHRAKTELDAGQQRHIATHAAQLLDAAGQFEDSMVLRLAAQDWTAAEELILTQARAFIAQGRWRNVVDWIGALPEQRVEQDCWLLHWLGTAWIGVDPARARSILERACQRATANSDVFCQVQTAAGMVEAYFLEYAVFTPLDRWIPVLERMFDSQICSMEPNAELRAQSAMLIALVYRMPDHKRIDQCVVRVDELLRTD-ADVNLRVTAATHL 789
            P +T ++A+ +       +LLDHLYRR LFT RR  K   YQ+H LFRAFL  +            +   A  LL+  G+ +D++ L  AA+DW  A  LIL  A   + QGR   + +WIGALP+  V+Q  WL +W G + +   PA AR  LE A  +   N D   Q+   A  +  Y  EYA FTPLDRWI  L+ +  S         ELR  +A++ A  YR PD   ++  V R +ELL +D   VN +V AA  L
Sbjct:  274 PRMTVAIAQKMGASSRAGELLDHLYRRQLFTDRRGSKPYSYQYHDLFRAFLLAQLDEFYTPAAINELRQRAGGLLEETGEIDDAVALYRAAEDWDGATRLILGNAEVLLRQGRGETLREWIGALPKAIVDQTPWLTYWFGVSHVSSAPADARIPLELAFDQMGQNKDRLGQILACAETIFTYMYEYANFTPLDRWIAALDCLLQSVFQFPSSVMELRVNAALVFAATYRRPDLGLLESRVHRAEELLASDDIPVNDKVAAAVPL 537          
BLAST of mRNA_P-wetherbeei_contig20631.1.1 vs. uniprot
Match: A0A537A5G3_9PROT (BTAD domain-containing protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537A5G3_9PROT)

HSP 1 Score: 165 bits (417), Expect = 6.550e-41
Identity = 110/308 (35.71%), Postives = 159/308 (51.62%), Query Frame = 1
Query:    1 PTITASMAESLTEDRSVLKLLDHLYRRHLFTSRRA-GKEPVYQFHALFRAFLQHRAKTELDAGQQRHIATHAAQLLDAAGQFEDSMVLRLAAQDWTAAEELILTQARAFIAQGRWRNVVDWIGALPEQRVEQDCWLLHWLGTAWIGVDPARARSILERACQRATANSDVFCQVQTAAGMVEAYFLEYAVFTPLDRWIPVLERMFDSQICSMEPNAELRAQSAMLIALVYRMPDHKRIDQCVVRVDELLRTDA----DVNLRVTAATHLTLYGTFTGHLQVSRRAAVLLAPLLADPAVTVFRRIFAWAV 909
            PT+ AS AE++T D    ++LD+LYR HLF  RR  G + VYQFHALFR FL    +  L   ++      AA  L   G F+ ++ L   A  W A   L L      +A+GR   + DWI ALP    +++  L  +LG A +  DP RA+++L  A     A  D+   + TAA  V+ ++ E+A F PLDRWI V +R   +      P   LR  SA LIAL++R P H RI      V+ L+ +D+     +N RV AA+ L  Y  +T    ++ +      P +ADP ++   R++ W V
Sbjct:  286 PTVGASDAEAITGDPEAPRVLDYLYRHHLFIDRRRNGPDFVYQFHALFREFLLVEGRKRLTPDERHAALDRAAGQLVGRGDFDAAVTLYREASAWEALTGLSLHAGALLLAEGRGNTLADWIDALPRAYRDREPRLALYLGVALLYADPPRAKALLSAAYDGFEACGDLRRMLMTAAHAVDCHYFEWADFAPLDRWIGVFDRHLGAAPPFNAPYDALRVYSAYLIALLFRQPGHPRIAAVAAEVERLIASDSALDVPINFRVNAASILFNYYNWTTKGDIADQLIARATPWVADPHLSPLNRVW-WRV 592          
BLAST of mRNA_P-wetherbeei_contig20631.1.1 vs. uniprot
Match: A0A4Z0C765_9BURK (BTAD domain-containing protein n=1 Tax=Ramlibacter henchirensis TaxID=204072 RepID=A0A4Z0C765_9BURK)

HSP 1 Score: 157 bits (398), Expect = 2.070e-38
Identity = 118/376 (31.38%), Postives = 182/376 (48.40%), Query Frame = 1
Query:    1 PTITASMAESLTEDRSVLKLLDHLYRRHLFTSRRAGK----EPVYQFHALFRAFLQHRAKTELDAGQQRHIATHAAQLLDAAGQFEDSMVLRLAAQDWTAAEELILTQARAFIAQGRWRNVVDWIGALPEQRVEQDCWLLHWLGTAWIGVDPARARSILERACQRATANSDVFCQVQTAAGMVEAYFLEYAVFTPLDRWIPVLERMFDSQICSMEPNAELRAQSAMLIALVYRMPDHKRIDQCVVRVDELLRTDA-DVNLRVTAATHLTLYGTFTGHLQVSRRAAVLLAPLLADPAVTVFRRIFAWAVINWYACNA----SDASLGEQAVASNLS--IAREEGMHIAERFACILGFYLDMDQRRIDAGRHRLERFE 1095
            P +TA++A  LT     ++LL+ LYRRH+FT +R  K    E VYQF+ LFR FLQHRA+      ++R ++  A +LL+ AG  ED++ L     DW     ++  +A   I QGR + V +W+ A+P   +E+  WL +W G + +   PAR+  +LE AC+R     DV  Q+   A +V A +     ++ +  W+  LE +    +       EL + +A+  AL +   DH  I     R+  L+  D  D   R+T ATHL  +   +G   + R+    + P++     +   R F      WY   A     +A   E +     +  +AREEG+  AE  A     YLD+  RR    + RL R E
Sbjct:  276 PQMTAALAHGLTGSEDAVRLLEQLYRRHMFTDQRRRKGERAEAVYQFNELFRTFLQHRAEQAWADDERRSLSGRAGRLLEEAGWGEDALPLLARGGDWGCYARVVCARAEPAIGQGRRQTVKEWLEAMPAGELERSPWLGYWQGRSLLQSAPARSVEVLEEACERFQQAGDVAGQLACGAAVVNALWFTRLGWSEVAPWVERLEPLLHRHVAFPSAAIELTSYAALHAALSFCRLDHPAIPGLARRLLALVGDDTLDWTQRLTTATHLITFLHNSGEDDLVRQLMGKVDPVVESRPASALSRSF------WYTFRAIHDMRNARYEESSERFQRAEDLAREEGLLQAEYAALQFRTYLDIVFRRFADAQARLARME 645          
BLAST of mRNA_P-wetherbeei_contig20631.1.1 vs. uniprot
Match: UPI00097C86FE (hypothetical protein n=1 Tax=Variovorax sp. KK3 TaxID=1855728 RepID=UPI00097C86FE)

HSP 1 Score: 157 bits (398), Expect = 2.070e-38
Identity = 120/376 (31.91%), Postives = 176/376 (46.81%), Query Frame = 1
Query:    1 PTITASMAESLTEDRSVLKLLDHLYRRHLFTSRRAGKEP----VYQFHALFRAFLQHRAKTELDAGQQRHIATHAAQLLDAAGQFEDSMVLRLAAQDWTAAEELILTQARAFIAQGRWRNVVDWIGALPEQRVEQDCWLLHWLGTAWIGVDPARARSILERACQRATANSDVFCQVQTAAGMVEAYFLEYAVFTPLDRWIPVLERMFDSQICSMEPNAELRAQSAMLIALVYRMPDHKRIDQCVVRVDELLRTDA-DVNLRVTAATHLTLYGTFTGHLQVSRRAAVLLAPLLADPAVTVFRRIFAWAVINWYACNASDASLGEQAVASNL------SIAREEGMHIAERFACILGFYLDMDQRRIDAGRHRLERFE 1095
            P +T  +AE LT      +LLDH Y+RHLFT RR   +P    V+QFHALFR+FLQH+A+    A + R +A  AAQLL+A G  E +  L   A D  A   L   QA   + QGR + ++DW+  +P    E+D WL +W G A + + P RA  +L+   QR   + D   Q+   A +V+  +     ++ +  W   LE +   +      + EL + +A+  AL +    H  +     R+  L+  DA D N R+  ATHL  Y       +++ R    + P +     +   R F      WY   A          AS++       +AREEG+  AE  A     YLD+  RR    R R+ R E
Sbjct:  276 PLMTVPLAEQLTGLPEAGRLLDHHYKRHLFTDRRRVAQPAAGHVFQFHALFRSFLQHQARAAWGADELRAVAARAAQLLEAEGHGEQAFALYEEAGDGAACARLAGVQAEGLLQQGRRQTLLDWLARIPPAERERDPWLGYWEGRALMAIAPDRALQVLQARHQRFAESGDAVGQLACGAAVVQTLWFARLGWSEVAPWADRLEPLMAGETVFPTRSIELMSLTALHAALAFCRLGHPAVRSFGPRLLALVGDDAIDWNQRLVTATHLITYFHNAAEHELALRLIGQVDPAVETLPASALNRAF------WYIFRAIHDLRQADFEASSMRFQRAEDLAREEGLLQAEFAAMQFHAYLDLTFRRAAESRARIARME 645          
BLAST of mRNA_P-wetherbeei_contig20631.1.1 vs. uniprot
Match: A0A3C0TPK1_9BACT (BTAD domain-containing protein n=1 Tax=Nitrospiraceae bacterium TaxID=2026770 RepID=A0A3C0TPK1_9BACT)

HSP 1 Score: 154 bits (389), Expect = 3.230e-37
Identity = 102/274 (37.23%), Postives = 143/274 (52.19%), Query Frame = 1
Query:    1 PTITASMAESLTEDRSVLKLLDHLYRRHLFTSRRAGKE--PVYQFHALFRAFLQHRAKTELDAGQQRHIATHAAQLLDAAGQFEDSMVLRLAAQDWTAAEELILTQARAFIAQGRWRNVVDWIGALPEQRVEQDCWLLHWLGTAWIGVDPARARSILERACQRATANSDVFCQVQTAAGMVEAYFLEYAVFTPLDRWIPVLERMFDSQICSMEPNAELRAQSAMLIALVYRMPDHKRIDQCVVRVDELLRTDADVNLRVTAATHLTLYGTFTGH 816
            P +TA M E LT      ++L  L RRH FT + +  E  PVYQ+H LFR FL  RA    DA     I + AA LL+A+G  ED++ L    Q+      LIL  A+AF+ QGR + +  WI  LPE+ + ++  LL WL    +  DP +  +I ERA       +D+     +    V A   E A FT LDRWI VLE++F +      P+ E R+ +++ IALV R P H  I +   R   + RT  D NLR+     +TL+  +TG+
Sbjct:  279 PKMTAPMTEKLTGMSDAEQVLSTLNRRHYFTGQHSSGEGVPVYQYHPLFREFLLSRAAKVYDASTMYAIQSEAAGLLEASGFIEDAVELYHQVQNLPRLVGLILEHAQAFLTQGRHQTLGAWITRLPEEALNENPSLLFWLSMCHLPFDPRKGGAIAERAYDLYQVRNDMAGMFMSCYPSVGAICYEQADFTSLDRWIAVLEKIFQTVTVFPSPDIEARSTNSLFIALVLRQPHHPDIQKYRDRFLTISRTMEDANLRIQLEADITLHYLWTGN 552          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20631.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A536TJ67_9PROT4.380e-5634.38BTAD domain-containing protein n=1 Tax=Betaproteob... [more]
A0A1Q7VHP9_9PROT1.270e-5439.07BTAD domain-containing protein n=1 Tax=Betaproteob... [more]
A0A536X535_9PROT2.180e-5238.13Uncharacterized protein (Fragment) n=1 Tax=Betapro... [more]
A0A6I6M3L5_9BURK9.750e-5131.76Uncharacterized protein n=2 Tax=Massilia flava Tax... [more]
UPI001BE984503.920e-4534.50hypothetical protein n=2 Tax=Variovorax paradoxus ... [more]
A0A158DEL0_9BURK4.260e-4238.64ATP-dependent transcription regulator LuxR n=1 Tax... [more]
A0A537A5G3_9PROT6.550e-4135.71BTAD domain-containing protein n=1 Tax=Betaproteob... [more]
A0A4Z0C765_9BURK2.070e-3831.38BTAD domain-containing protein n=1 Tax=Ramlibacter... [more]
UPI00097C86FE2.070e-3831.91hypothetical protein n=1 Tax=Variovorax sp. KK3 Ta... [more]
A0A3C0TPK1_9BACT3.230e-3737.23BTAD domain-containing protein n=1 Tax=Nitrospirac... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20631contigP-wetherbeei_contig20631:4..1212 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1218084.BBJK01000075_gene5239
PFAMsBTAD
Model size1209
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.27e-43
EggNOG OGsCOG2909@1|root,COG3629@1|root,COG2909@2|Bacteria,COG3629@2|Bacteria,1MVZZ@1224|Proteobacteria,2VXDK@28216|Betaproteobacteria,1K5E1@119060|Burkholderiaceae
DescriptionBacterial transcriptional activator domain
Cds size1191
COG categoryK
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186205.0838468-CDS-P-wetherbeei_contig20631:3..11941683186205.0838468-CDS-P-wetherbeei_contig20631:3..1194Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20631 4..1194 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186205.092131-UTR-P-wetherbeei_contig20631:1194..12121683186205.092131-UTR-P-wetherbeei_contig20631:1194..1212Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig20631 1195..1212 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20631.1.1prot_P-wetherbeei_contig20631.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20631 4..1194 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20631.1.1

>prot_P-wetherbeei_contig20631.1.1 ID=prot_P-wetherbeei_contig20631.1.1|Name=mRNA_P-wetherbeei_contig20631.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=397bp
MAESLTEDRSVLKLLDHLYRRHLFTSRRAGKEPVYQFHALFRAFLQHRAK
TELDAGQQRHIATHAAQLLDAAGQFEDSMVLRLAAQDWTAAEELILTQAR
AFIAQGRWRNVVDWIGALPEQRVEQDCWLLHWLGTAWIGVDPARARSILE
RACQRATANSDVFCQVQTAAGMVEAYFLEYAVFTPLDRWIPVLERMFDSQ
ICSMEPNAELRAQSAMLIALVYRMPDHKRIDQCVVRVDELLRTDADVNLR
VTAATHLTLYGTFTGHLQVSRRAAVLLAPLLADPAVTVFRRIFAWAVINW
YACNASDASLGEQAVASNLSIAREEGMHIAERFACILGFYLDMDQRRIDA
GRHRLERFEEIMLPEQPYEAASLVNMKAWFGVYTGDPAPPLTHGARA
back to top

mRNA from alignment at P-wetherbeei_contig20631:4..1212-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20631.1.1 ID=mRNA_P-wetherbeei_contig20631.1.1|Name=mRNA_P-wetherbeei_contig20631.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1209bp|location=Sequence derived from alignment at P-wetherbeei_contig20631:4..1212- (Phaeothamnion wetherbeei SAG_119_79)
CCGACTATTACTGCGTCGATGGCGGAATCGCTGACGGAAGACCGGTCGGT CCTGAAGTTGCTCGATCACCTCTATCGCCGCCATCTGTTTACGAGCAGAC GGGCCGGAAAGGAACCGGTGTACCAGTTCCATGCGCTGTTCCGCGCCTTC CTGCAGCACCGTGCAAAGACGGAGCTGGACGCGGGGCAGCAAAGACATAT CGCGACGCATGCTGCACAGCTACTCGACGCTGCCGGGCAATTCGAAGATT CGATGGTCTTGCGGTTGGCCGCGCAGGACTGGACCGCCGCTGAAGAACTC ATTCTGACGCAGGCACGGGCCTTCATCGCGCAGGGGCGCTGGCGCAATGT CGTGGACTGGATCGGCGCCCTTCCCGAACAGCGAGTGGAGCAAGATTGCT GGCTGTTGCATTGGCTGGGCACGGCCTGGATCGGCGTTGATCCGGCGCGC GCCCGGTCGATTCTTGAGCGAGCCTGCCAAAGGGCAACAGCAAACAGTGA TGTGTTCTGCCAGGTTCAGACGGCGGCCGGCATGGTCGAAGCCTATTTTC TGGAATACGCGGTGTTCACACCGCTGGATCGCTGGATTCCCGTTCTCGAA AGGATGTTCGACTCGCAAATATGCTCGATGGAGCCGAACGCGGAACTGCG CGCACAATCGGCCATGCTGATCGCGCTGGTTTACCGGATGCCGGACCACA AGCGGATCGACCAGTGCGTGGTTCGCGTCGATGAACTGCTGCGGACCGAC GCGGACGTCAATCTCCGCGTAACGGCGGCAACTCACCTGACCCTGTATGG AACCTTTACCGGCCATTTGCAGGTGAGCCGCCGCGCCGCCGTGCTGCTAG CGCCGTTGCTTGCCGATCCTGCCGTCACTGTCTTCCGGAGGATTTTCGCC TGGGCAGTTATCAACTGGTATGCCTGCAACGCCAGTGATGCCTCGCTCGG CGAGCAGGCCGTGGCCAGCAACCTGTCGATCGCGCGCGAGGAAGGGATGC ATATTGCAGAGCGCTTTGCGTGCATCCTTGGTTTTTACTTAGACATGGAC CAGCGGCGCATCGATGCAGGCCGACACCGCCTCGAGCGCTTCGAAGAGAT CATGCTCCCTGAGCAACCCTATGAGGCTGCGTCGCTGGTAAACATGAAGG CCTGGTTTGGCGTGTACACCGGGGACCCCGCGCCGCCGCTAACCCATGGT GCGCGGGCT
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig20631:4..1212-

>mRNA_P-wetherbeei_contig20631.1.1 ID=mRNA_P-wetherbeei_contig20631.1.1|Name=mRNA_P-wetherbeei_contig20631.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1191bp|location=Sequence derived from alignment at P-wetherbeei_contig20631:4..1212- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGGAATCGCTGACGGAAGACCGGTCGGTCCTGAAGTTGCTCGATCA
CCTCTATCGCCGCCATCTGTTTACGAGCAGACGGGCCGGAAAGGAACCGG
TGTACCAGTTCCATGCGCTGTTCCGCGCCTTCCTGCAGCACCGTGCAAAG
ACGGAGCTGGACGCGGGGCAGCAAAGACATATCGCGACGCATGCTGCACA
GCTACTCGACGCTGCCGGGCAATTCGAAGATTCGATGGTCTTGCGGTTGG
CCGCGCAGGACTGGACCGCCGCTGAAGAACTCATTCTGACGCAGGCACGG
GCCTTCATCGCGCAGGGGCGCTGGCGCAATGTCGTGGACTGGATCGGCGC
CCTTCCCGAACAGCGAGTGGAGCAAGATTGCTGGCTGTTGCATTGGCTGG
GCACGGCCTGGATCGGCGTTGATCCGGCGCGCGCCCGGTCGATTCTTGAG
CGAGCCTGCCAAAGGGCAACAGCAAACAGTGATGTGTTCTGCCAGGTTCA
GACGGCGGCCGGCATGGTCGAAGCCTATTTTCTGGAATACGCGGTGTTCA
CACCGCTGGATCGCTGGATTCCCGTTCTCGAAAGGATGTTCGACTCGCAA
ATATGCTCGATGGAGCCGAACGCGGAACTGCGCGCACAATCGGCCATGCT
GATCGCGCTGGTTTACCGGATGCCGGACCACAAGCGGATCGACCAGTGCG
TGGTTCGCGTCGATGAACTGCTGCGGACCGACGCGGACGTCAATCTCCGC
GTAACGGCGGCAACTCACCTGACCCTGTATGGAACCTTTACCGGCCATTT
GCAGGTGAGCCGCCGCGCCGCCGTGCTGCTAGCGCCGTTGCTTGCCGATC
CTGCCGTCACTGTCTTCCGGAGGATTTTCGCCTGGGCAGTTATCAACTGG
TATGCCTGCAACGCCAGTGATGCCTCGCTCGGCGAGCAGGCCGTGGCCAG
CAACCTGTCGATCGCGCGCGAGGAAGGGATGCATATTGCAGAGCGCTTTG
CGTGCATCCTTGGTTTTTACTTAGACATGGACCAGCGGCGCATCGATGCA
GGCCGACACCGCCTCGAGCGCTTCGAAGAGATCATGCTCCCTGAGCAACC
CTATGAGGCTGCGTCGCTGGTAAACATGAAGGCCTGGTTTGGCGTGTACA
CCGGGGACCCCGCGCCGCCGCTAACCCATGGTGCGCGGGCT
back to top