mRNA_P-wetherbeei_contig20618.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20618.1.1
Unique NamemRNA_P-wetherbeei_contig20618.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20618.1.1 vs. uniprot
Match: A0A3D5DGX9_9GAMM (DNA helicase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DGX9_9GAMM)

HSP 1 Score: 585 bits (1507), Expect = 1.270e-202
Identity = 288/404 (71.29%), Postives = 340/404 (84.16%), Query Frame = 1
Query:    1 LLRAHELWMAHPGLLRHYRERFWHVLVDEFQDTNAIQYAWLKNLVGDDGNIFVVGDDDQSIYSWRGARVENMQHFRKDFPNNELVRLEQNYRSTGNILSAANTLIANNPSRLGKELWTDGAKGEPITLYAAYNDLDEARFCVDRIRLWHDHGGRLTESAMLYRTSAQSRVLEDALRQADLPYRVYGGFRFYERAEIKDALAYVRLATSRADDAAFERIVNVPPRGIGQRSIDELREVAKRERITLWEATRRLTDTKELSARSLGALQRFLDLIDRLSIAVTELPLPELLEHVIAHSGLIEHYKKEKGERGLDRIDNLEELVTAARDFKPAIDDEEIPILAAFLTHAALESGDGQAEAYSDCVQLMTLHSAKGLEFPLVFLVGVEEGLFPHQRSAADPVQLEEER 1212
            LLRA+ELW   P LLRHY+ERF HVLVDEFQDT+ +QY WL+ LVG  GN+FVVGDDDQSIYSWRGA +ENMQ F+++FPNNE++RLEQNYRS+GNIL+AAN LI NNP+RLGKELW++G KGEPI LY AYND+DEARF V+R+  WHD GGR  E A+LYR SAQSRVLEDALRQAD+PYRV+GGF+FYERAEIKD LAY+RLA SR DD+AFERIVN P RGIGQRSI+ LR  A+  + TLWE+ R +   +EL ARS+GA++ F +LIDRLS+A+    L + +E VI HSGL++HY+KEKG+RGLDRI+NLEELV+AARDF P  D+E IP++AAFL+HAALESG+GQA A  D VQLMTLHSAKGLEFP VFLVGVEEGLFPHQRS+ D  QLEEER
Sbjct:  193 LLRAYELWSTRPELLRHYQERFRHVLVDEFQDTSVLQYGWLRQLVGAQGNLFVVGDDDQSIYSWRGASIENMQRFQREFPNNEIIRLEQNYRSSGNILAAANALIENNPTRLGKELWSEGEKGEPINLYLAYNDVDEARFVVERMGQWHDLGGRFDECAVLYRVSAQSRVLEDALRQADIPYRVHGGFKFYERAEIKDTLAYLRLAYSRGDDSAFERIVNTPTRGIGQRSIEALRNAARLGQATLWESARHIIANRELGARSVGAIESFQNLIDRLSVAIEGKGLGDTIETVIEHSGLLDHYRKEKGDRGLDRIENLEELVSAARDFNPTEDEEAIPLVAAFLSHAALESGEGQASANEDSVQLMTLHSAKGLEFPQVFLVGVEEGLFPHQRSSEDASQLEEER 596          
BLAST of mRNA_P-wetherbeei_contig20618.1.1 vs. uniprot
Match: A0A1Z9ULR5_9GAMM (DNA helicase n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9ULR5_9GAMM)

HSP 1 Score: 543 bits (1398), Expect = 4.180e-186
Identity = 270/404 (66.83%), Postives = 322/404 (79.70%), Query Frame = 1
Query:    1 LLRAHELWMAHPGLLRHYRERFWHVLVDEFQDTNAIQYAWLKNLVGDDGNIFVVGDDDQSIYSWRGARVENMQHFRKDFPNNELVRLEQNYRSTGNILSAANTLIANNPSRLGKELWTDGAKGEPITLYAAYNDLDEARFCVDRIRLWHDHGGRLTESAMLYRTSAQSRVLEDALRQADLPYRVYGGFRFYERAEIKDALAYVRLATSRADDAAFERIVNVPPRGIGQRSIDELREVAKRERITLWEATRRLTDTKELSARSLGALQRFLDLIDRLSIAVTELPLPELLEHVIAHSGLIEHYKKEKGERGLDRIDNLEELVTAARDFKPAIDDEEIPILAAFLTHAALESGDGQAEAYSDCVQLMTLHSAKGLEFPLVFLVGVEEGLFPHQRSAADPVQLEEER 1212
            LL A++LW   P LL  YR RF H+LVDEFQDTNAIQYAWL+ L G DG++F VGDDDQSIYSWRGA+VENMQ FR  F  + +VRLEQNYRST NIL  AN+LI+ NPSR+GKELWTDGAKGEP++LY+ YNDLDE+RF  DR+  W D G RL+E A+LYR SAQSRVLEDALRQ D+PYRVYGGFRFYERAEIKDALAYVRL  SRADDAA ERIVN+P RGIG RS++++R +A+    TLW A   + + K +SAR++GAL+ F+ LID++++   +  L  LLE++I+ SGL +HYKKEKGERG DRI+NL EL+ AA DF     DE++ +L AFL HAALESG+G  +   D VQLMTLHSAKGLEFPLVF+VGVEEGLFPHQRS  DP+QLEEER
Sbjct:  193 LLSANDLWRKCPALLAQYRRRFRHILVDEFQDTNAIQYAWLRQLAGSDGHLFAVGDDDQSIYSWRGAQVENMQKFRDHFTQHHMVRLEQNYRSTSNILDCANSLISYNPSRIGKELWTDGAKGEPVSLYSGYNDLDESRFVADRVSQWFDSGYRLSECAILYRVSAQSRVLEDALRQTDIPYRVYGGFRFYERAEIKDALAYVRLVNSRADDAALERIVNLPSRGIGLRSLEQVRLIARERDCTLWSAIASIIEDKSISARAIGALKSFVQLIDQMTVLSRDESLAPLLENIISLSGLEDHYKKEKGERGFDRIENLNELIAAAEDFSGQSTDEDMSLLDAFLAHAALESGEGXVDENEDGVQLMTLHSAKGLEFPLVFIVGVEEGLFPHQRSVDDPLQLEEER 596          
BLAST of mRNA_P-wetherbeei_contig20618.1.1 vs. uniprot
Match: A0A1G0F0J8_9GAMM (DNA helicase n=1 Tax=Gammaproteobacteria bacterium RBG_16_57_12 TaxID=1798266 RepID=A0A1G0F0J8_9GAMM)

HSP 1 Score: 516 bits (1328), Expect = 1.580e-175
Identity = 254/404 (62.87%), Postives = 327/404 (80.94%), Query Frame = 1
Query:    1 LLRAHELWMAHPGLLRHYRERFWHVLVDEFQDTNAIQYAWLKNLVGDDGNIFVVGDDDQSIYSWRGARVENMQHFRKDFPNNELVRLEQNYRSTGNILSAANTLIANNPSRLGKELWTDGAKGEPITLYAAYNDLDEARFCVDRIRLWHDHGGRLTESAMLYRTSAQSRVLEDALRQADLPYRVYGGFRFYERAEIKDALAYVRLATSRADDAAFERIVNVPPRGIGQRSIDELREVAKRERITLWEATRRLTDTKELSARSLGALQRFLDLIDRLSIAVTELPLPELLEHVIAHSGLIEHYKKEKGERGLDRIDNLEELVTAARDFKPAIDDEEIPILAAFLTHAALESGDGQAEAYSDCVQLMTLHSAKGLEFPLVFLVGVEEGLFPHQRSAADPVQLEEER 1212
            LLRAHELW+ HP +L+HYR+RF H+LVDEFQDTNAIQYAWL+ L G D  +F+VGDDDQSIY WRGAR+EN+ HF +D+P + ++RLEQNYRSTGNIL+AAN LI  N  RLGK LW++  +GEP+ +Y+A+N+LDEARF V RI+ W + GG+  E+A+LYR++AQSRVLE+AL QA +PYRVYGG RF+ERAEIKDALAY+RL  +R DDA+FER+VN P RGIGQRS++ +R+ A+++ +TLW+A + +    +L AR+  AL  F+ LID+++ A   LPL E ++H+++ S L+ HY++EKGERG  R++NLEELVTAAR F+P  + EE+  L+AFL HAALE+GDGQAEA  DCVQLMTLHSAKGLEFPLVFL G+EEGLFPHQ S  +P +LEEER
Sbjct:  193 LLRAHELWLKHPEILQHYRQRFRHLLVDEFQDTNAIQYAWLRLLGGGDNCLFIVGDDDQSIYGWRGARIENIHHFTRDYPGSRIIRLEQNYRSTGNILAAANALIDRNSGRLGKTLWSEDKQGEPLRVYSAFNELDEARFVVQRIQHWVEQGGKRRETAILYRSNAQSRVLEEALLQAGMPYRVYGGLRFFERAEIKDALAYLRLLANRHDDASFERVVNTPTRGIGQRSVELVRDQARQQGVTLWQAAQDILQQGQLPARAGQALAAFIKLIDQMAEATGALPLHEQVDHMLSASTLLTHYQQEKGERGRARVENLEELVTAARYFEPD-ETEELDRLSAFLAHAALEAGDGQAEAGEDCVQLMTLHSAKGLEFPLVFLCGLEEGLFPHQMSIEEPGRLEEER 595          
BLAST of mRNA_P-wetherbeei_contig20618.1.1 vs. uniprot
Match: A0A6L7A204_ECOLX (DNA helicase (Fragment) n=6 Tax=Enterobacteriaceae TaxID=543 RepID=A0A6L7A204_ECOLX)

HSP 1 Score: 507 bits (1305), Expect = 1.130e-173
Identity = 251/404 (62.13%), Postives = 315/404 (77.97%), Query Frame = 1
Query:    1 LLRAHELWMAHPGLLRHYRERFWHVLVDEFQDTNAIQYAWLKNLVGDDGNIFVVGDDDQSIYSWRGARVENMQHFRKDFPNNELVRLEQNYRSTGNILSAANTLIANNPSRLGKELWTDGAKGEPITLYAAYNDLDEARFCVDRIRLWHDHGGRLTESAMLYRTSAQSRVLEDALRQADLPYRVYGGFRFYERAEIKDALAYVRLATSRADDAAFERIVNVPPRGIGQRSIDELREVAKRERITLWEATRRLTDTKELSARSLGALQRFLDLIDRLSIAVTELPLPELLEHVIAHSGLIEHYKKEKGERGLDRIDNLEELVTAARDFKPAIDDEEIPILAAFLTHAALESGDGQAEAYSDCVQLMTLHSAKGLEFPLVFLVGVEEGLFPHQRSAADPVQLEEER 1212
            LLRAHELW+  P +L+HYRERF ++LVDEFQDTN IQYAW++ L GD G + +VGDDDQSIY WRGA+VEN+Q F  DFP  E +RLEQNYRST NILSAAN LI NN  RLGK+LWTDGA GEPI+LY A+N+LDEARF V+RI+ W D+GG L E A+LYR++AQSRVLE+AL QA +PYR+YGG RF+ER EIKDAL+Y+RL  +R DDAAFER+VN P RGIG R++D +R+ ++  ++TLW+A R L   K L+ R+  ALQRF++LID L+    ++PL    + VI  SGL   Y++EKGE+G  RI+NLEELVTA R F    +DE++  L AFL+HAALE+G+GQA+ + D VQLMTLHSAKGLEFP VF+VG+EEG+FP Q S  +  +LEEER
Sbjct:  193 LLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEER 596          
BLAST of mRNA_P-wetherbeei_contig20618.1.1 vs. uniprot
Match: A0A521RBW8_9GAMM (DNA helicase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A521RBW8_9GAMM)

HSP 1 Score: 510 bits (1313), Expect = 4.470e-173
Identity = 265/405 (65.43%), Postives = 318/405 (78.52%), Query Frame = 1
Query:    1 LLRAHELWMAHPGLLRHYRERFWHVLVDEFQDTNAIQYAWLKNLVGDDGNIFVVGDDDQSIYSWRGARVENMQHFRKDFPNNELVRLEQNYRSTGNILSAANTLIANNPSRLGKELWTDGAKGEPITLYAAYNDLDEARFCVDRIRLWHDHGGRLTESAMLYRTSAQSRVLEDALRQADLPYRVYGGFRFYERAEIKDALAYVRLATSRADDAAFERIVNVPPRGIGQRSIDELREVAKRERITLWEATRRLTDTKELSARSLGALQRFLDLIDRLSIAVTELPLPELLEHVIAHSGLIEHYKKEKGERGLDRIDNLEELVTAARDFKPAID-DEEIPILAAFLTHAALESGDGQAEAYSDCVQLMTLHSAKGLEFPLVFLVGVEEGLFPHQRSAADPVQLEEER 1212
            LLRAHEL+     ++ HYR+RF  VLVDEFQDTNA+QYAWL+ LVGD G +F VGDDDQS+YSWRGA VENMQHF++DF N  L++LEQNYRSTG IL AAN LIANN SRLGKELWTDGA GE I+LY AYN++DEA++ + RIR     G    + A+LYR SAQSR+LE+ L Q  +PYRVYGG RFYERAEIKD+LAYVRLA    DDA+FERIVN P RGIGQ++IDELR +AKRER +LW A  RL + K L +R+L +LQ+FL LI  ++      PLPE ++ VI  SGLIEHY+KEKGE+G  R++N+EELVTAAR+F+   D   E+  L AFL HAALESG+ QAE +SDCVQLMTLHSAKGLEFP+VF+VG+EEGLFPHQRS+ +  QLEEER
Sbjct:  193 LLRAHELFRDQEPIVTHYRQRFRQVLVDEFQDTNALQYAWLRLLVGDSGALFAVGDDDQSVYSWRGACVENMQHFQRDFHNARLIKLEQNYRSTGVILKAANALIANNRSRLGKELWTDGATGEKISLYTAYNEVDEAKYVIGRIRTARAAGSAWNDHAILYRVSAQSRMLEEILMQEGIPYRVYGGMRFYERAEIKDSLAYVRLAAYPEDDASFERIVNFPTRGIGQKTIDELRALAKRERCSLWIAATRLIEGKLLPSRALASLQQFLHLIVGMAGGAKACPLPEFVDAVIRQSGLIEHYRKEKGEKGEARLENMEELVTAAREFERNPDLHGELQPLPAFLAHAALESGETQAENWSDCVQLMTLHSAKGLEFPVVFMVGMEEGLFPHQRSSGEMAQLEEER 597          
BLAST of mRNA_P-wetherbeei_contig20618.1.1 vs. uniprot
Match: A0A3M1DI60_9GAMM (DNA helicase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1DI60_9GAMM)

HSP 1 Score: 509 bits (1310), Expect = 8.230e-173
Identity = 255/404 (63.12%), Postives = 309/404 (76.49%), Query Frame = 1
Query:    1 LLRAHELWMAHPGLLRHYRERFWHVLVDEFQDTNAIQYAWLKNLVGDDGNIFVVGDDDQSIYSWRGARVENMQHFRKDFPNNELVRLEQNYRSTGNILSAANTLIANNPSRLGKELWTDGAKGEPITLYAAYNDLDEARFCVDRIRLWHDHGGRLTESAMLYRTSAQSRVLEDALRQADLPYRVYGGFRFYERAEIKDALAYVRLATSRADDAAFERIVNVPPRGIGQRSIDELREVAKRERITLWEATRRLTDTKELSARSLGALQRFLDLIDRLSIAVTELPLPELLEHVIAHSGLIEHYKKEKGERGLDRIDNLEELVTAARDFKPAIDDEEIPILAAFLTHAALESGDGQAEAYSDCVQLMTLHSAKGLEFPLVFLVGVEEGLFPHQRSAADPVQLEEER 1212
            LLRAHELW   P LL HYRERF  +LVDEFQDTNAIQYAWL+ L G+ G +F VGDDDQSIYSWRGA+VENMQ F+++F    L+RLEQNYRSTGNILSAAN LIANN  RLGKELWT+   G+PI  + A+ND++EA+F   ++R W + G R  E A+LYR SAQSRVLE+ALR+  +PY V+GGFRFYERAE+KDALAY+RL  +RADD AFER++N P RGIG RS++ +R++A+   + LW+A   L + K L AR++ A+  FL LID L     ELPL E +E VI  SGL+ HY+KEK +R  DRI+NLEELVTAARDF+ A +DE    L  FL HAALE+G+GQ  A  DCVQLMTLH+AKGLEFPLV L G+EEGLFPHQRS+ DP +L EER
Sbjct:  193 LLRAHELWREQPHLLEHYRERFRFLLVDEFQDTNAIQYAWLRTLAGERGLVFAVGDDDQSIYSWRGAQVENMQRFQREFSQVRLIRLEQNYRSTGNILSAANALIANNRDRLGKELWTEDEPGDPILKFTAFNDVEEAQFITAQVRKWREQGRRYDECAVLYRVSAQSRVLEEALRREGIPYHVHGGFRFYERAEVKDALAYLRLVANRADDTAFERVINTPTRGIGLRSLETIRQIARERDLALWQAACVLVEEKTLPARAVNAVDAFLRLIDSLDAQTRELPLGEQMETVIERSGLVAHYRKEKSDRAEDRIENLEELVTAARDFRLAEEDEFDDPLLGFLAHAALEAGEGQTPAGEDCVQLMTLHAAKGLEFPLVVLAGMEEGLFPHQRSSEDPAKLAEER 596          
BLAST of mRNA_P-wetherbeei_contig20618.1.1 vs. uniprot
Match: A0A5B8HED1_9GAMM (DNA helicase n=57 Tax=root TaxID=1 RepID=A0A5B8HED1_9GAMM)

HSP 1 Score: 509 bits (1310), Expect = 8.490e-173
Identity = 251/404 (62.13%), Postives = 318/404 (78.71%), Query Frame = 1
Query:    1 LLRAHELWMAHPGLLRHYRERFWHVLVDEFQDTNAIQYAWLKNLVGDDGNIFVVGDDDQSIYSWRGARVENMQHFRKDFPNNELVRLEQNYRSTGNILSAANTLIANNPSRLGKELWTDGAKGEPITLYAAYNDLDEARFCVDRIRLWHDHGGRLTESAMLYRTSAQSRVLEDALRQADLPYRVYGGFRFYERAEIKDALAYVRLATSRADDAAFERIVNVPPRGIGQRSIDELREVAKRERITLWEATRRLTDTKELSARSLGALQRFLDLIDRLSIAVTELPLPELLEHVIAHSGLIEHYKKEKGERGLDRIDNLEELVTAARDFKPAIDDEEIPILAAFLTHAALESGDGQAEAYSDCVQLMTLHSAKGLEFPLVFLVGVEEGLFPHQRSAADPVQLEEER 1212
            LLRAHELW+  P +L+HYR+RF ++LVDEFQDTN IQYAW++ L GD   + +VGDDDQSIY WRGA+VEN+QHF +DF +   +RLEQNYRST NIL+AAN LIA+N  RLGK LWTDG +GEPI+LY A+N+LDEARF V RI++W + GG L+E A+LYR++AQSRVLEDAL Q  LPYR+YGG RF+ER EIKDAL+Y+RL T+R DDAAFER+VN P RGIG R++D +R+ A+  ++TLW+ATR L   K L+ R+  ALQRFL+L+D L+    +LPL    + VI  SGL   Y++EKGE+G  R++NLEELVTA R F    +D+++P L AFL+HAALE+G+GQA+AY D VQLMTLHSAKGLEFP VF+VG+EEG+FP Q S  +  +LEEER
Sbjct:  193 LLRAHELWLNKPHILQHYRDRFNNILVDEFQDTNRIQYAWIRLLAGDSAKVMIVGDDDQSIYGWRGAQVENIQHFLRDFNDVATIRLEQNYRSTANILNAANALIAHNGDRLGKNLWTDGIEGEPISLYCAFNELDEARFVVSRIKVWQEAGGALSECAILYRSNAQSRVLEDALLQQSLPYRIYGGMRFFERQEIKDALSYLRLMTNRNDDAAFERVVNTPTRGIGDRTLDVVRQTARDRQLTLWQATRALLQEKVLAGRAAAALQRFLELVDALASDTADLPLHVQTDRVIRDSGLWSMYEQEKGEKGQTRVENLEELVTATRQFSYQDEDQDLPPLQAFLSHAALEAGEGQADAYQDAVQLMTLHSAKGLEFPQVFVVGMEEGMFPSQMSLDEGGRLEEER 596          
BLAST of mRNA_P-wetherbeei_contig20618.1.1 vs. uniprot
Match: A0A7U7FAB1_YEREN (DNA helicase n=211 Tax=Enterobacterales TaxID=91347 RepID=A0A7U7FAB1_YEREN)

HSP 1 Score: 507 bits (1306), Expect = 3.410e-172
Identity = 248/404 (61.39%), Postives = 318/404 (78.71%), Query Frame = 1
Query:    1 LLRAHELWMAHPGLLRHYRERFWHVLVDEFQDTNAIQYAWLKNLVGDDGNIFVVGDDDQSIYSWRGARVENMQHFRKDFPNNELVRLEQNYRSTGNILSAANTLIANNPSRLGKELWTDGAKGEPITLYAAYNDLDEARFCVDRIRLWHDHGGRLTESAMLYRTSAQSRVLEDALRQADLPYRVYGGFRFYERAEIKDALAYVRLATSRADDAAFERIVNVPPRGIGQRSIDELREVAKRERITLWEATRRLTDTKELSARSLGALQRFLDLIDRLSIAVTELPLPELLEHVIAHSGLIEHYKKEKGERGLDRIDNLEELVTAARDFKPAIDDEEIPILAAFLTHAALESGDGQAEAYSDCVQLMTLHSAKGLEFPLVFLVGVEEGLFPHQRSAADPVQLEEER 1212
            LLRAHELW+  P +L HYRERF ++LVDEFQDTN IQYAW++ L GD  N+ +VGDDDQSIY WRGA+VEN+Q F KDFP  E +RLEQNYRST NIL+AANTLIANN  R+GK LWTDGA+GEPI+LY A+N+LDEARF V+RI+ W D+GG L + A+LYR++AQSRVLE+AL Q  +PYR+YGG RF+ER EIKDALAY+RL ++R DDAAFER+VN P RGIG R++D +R+ A+  ++TLW++TR +   K L+ R+  ALQRF++L+D L+    ++PL    + VI  SGL   Y++EKGE+G  R++NLEELV A R +    +D+++  L AFL+HAALE+G+GQA+AY D VQLMTLHSAKGLEFP VF+VG+EEG+FP Q S  +  +LEEER
Sbjct:  193 LLRAHELWLNKPHILNHYRERFTNILVDEFQDTNNIQYAWIRLLAGDRSNVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAETIRLEQNYRSTSNILTAANTLIANNDGRMGKNLWTDGAQGEPISLYCAFNELDEARFVVNRIKAWQDNGGALNDCAILYRSNAQSRVLEEALLQTAMPYRIYGGQRFFERQEIKDALAYLRLISNRNDDAAFERVVNTPTRGIGDRTLDVIRQTARDRQLTLWQSTRAMLQEKVLAGRAASALQRFVELVDSLAHETADMPLHVQTDRVIRDSGLWSMYEQEKGEKGQARVENLEELVNATRQYSYQDEDQDLMPLQAFLSHAALEAGEGQADAYQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEER 596          
BLAST of mRNA_P-wetherbeei_contig20618.1.1 vs. uniprot
Match: A0A2N2AAG4_9GAMM (DNA helicase n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2N2AAG4_9GAMM)

HSP 1 Score: 507 bits (1305), Expect = 4.680e-172
Identity = 254/405 (62.72%), Postives = 318/405 (78.52%), Query Frame = 1
Query:    1 LLRAHELWMAHPGLLRHYRERFWHVLVDEFQDTNAIQYAWLKNLVGDDGNIFVVGDDDQSIYSWRGARVENMQHFRKDFPNNELVRLEQNYRSTGNILSAANTLIANNPSRLGKELWTDGAKGEPITLYAAYNDLDEARFCVDRIRLWHDHGGRLTESAMLYRTSAQSRVLEDALRQADLPYRVYGGFRFYERAEIKDALAYVRLATSRADDAAFERIVNVPPRGIGQRSIDELREVAKRERITLWEATRRLTDTKELSARSLGALQRFLDLIDRLSIAVTELPLPELLEHVIAHSGLIEHYKKEKGERGLDRIDNLEELVTAARDFKPAIDDE-EIPILAAFLTHAALESGDGQAEAYSDCVQLMTLHSAKGLEFPLVFLVGVEEGLFPHQRSAADPVQLEEER 1212
            LLRAHEL+   P +L+HYRERF H+LVDEFQDTNAIQYAWL+ + GD G +F VGDDDQSIY WRGA+VEN+  FRKD  + +L+RLEQNYRST  ILSAAN LI +N  RLGKELWT+G KGEPI LY A+N+L+EARF V++IRLW + G R  E+A+LYR++AQSRVLE+AL QA +PYR+YGG RF+ER EIKDALAY+RL  +R DDA+FER VN P RGIG+R++  +RE A+   ++LW A + + +   L+AR+  AL+ FLDLI+ L+  +  L L E  +HV+  SGLIEHY+KEKGE+G  RI+NLEELV AAR F+ + ++  ++  L AFL HAALESG+GQA+ + D VQLMTLHSAKGLEFPLVFL G+EEGLFPHQRS  +P +LEEER
Sbjct:  193 LLRAHELFAKRPDVLQHYRERFRHILVDEFQDTNAIQYAWLRQIAGDSGKVFAVGDDDQSIYGWRGAKVENLHQFRKDLSDVQLIRLEQNYRSTATILSAANALIDHNEDRLGKELWTEGEKGEPIRLYGAFNELEEARFVVEQIRLWVNEGNRRDEAALLYRSNAQSRVLEEALMQAQMPYRIYGGLRFFERQEIKDALAYLRLVANRHDDASFERAVNTPTRGIGERTVQAVREHARAFSLSLWRAAQEIIERNMLAARAANALKAFLDLIETLAADIAALELHEQAQHVVQLSGLIEHYRKEKGEKGQARIENLEELVNAARQFEFSEEEHGDMRPLDAFLAHAALESGEGQADEWEDAVQLMTLHSAKGLEFPLVFLCGMEEGLFPHQRSMDEPGRLEEER 597          
BLAST of mRNA_P-wetherbeei_contig20618.1.1 vs. uniprot
Match: UVRD_ECOLI (DNA helicase II n=2983 Tax=root TaxID=1 RepID=UVRD_ECOLI)

HSP 1 Score: 507 bits (1305), Expect = 4.830e-172
Identity = 251/404 (62.13%), Postives = 315/404 (77.97%), Query Frame = 1
Query:    1 LLRAHELWMAHPGLLRHYRERFWHVLVDEFQDTNAIQYAWLKNLVGDDGNIFVVGDDDQSIYSWRGARVENMQHFRKDFPNNELVRLEQNYRSTGNILSAANTLIANNPSRLGKELWTDGAKGEPITLYAAYNDLDEARFCVDRIRLWHDHGGRLTESAMLYRTSAQSRVLEDALRQADLPYRVYGGFRFYERAEIKDALAYVRLATSRADDAAFERIVNVPPRGIGQRSIDELREVAKRERITLWEATRRLTDTKELSARSLGALQRFLDLIDRLSIAVTELPLPELLEHVIAHSGLIEHYKKEKGERGLDRIDNLEELVTAARDFKPAIDDEEIPILAAFLTHAALESGDGQAEAYSDCVQLMTLHSAKGLEFPLVFLVGVEEGLFPHQRSAADPVQLEEER 1212
            LLRAHELW+  P +L+HYRERF ++LVDEFQDTN IQYAW++ L GD G + +VGDDDQSIY WRGA+VEN+Q F  DFP  E +RLEQNYRST NILSAAN LI NN  RLGK+LWTDGA GEPI+LY A+N+LDEARF V+RI+ W D+GG L E A+LYR++AQSRVLE+AL QA +PYR+YGG RF+ER EIKDAL+Y+RL  +R DDAAFER+VN P RGIG R++D +R+ ++  ++TLW+A R L   K L+ R+  ALQRF++LID L+    ++PL    + VI  SGL   Y++EKGE+G  RI+NLEELVTA R F    +DE++  L AFL+HAALE+G+GQA+ + D VQLMTLHSAKGLEFP VF+VG+EEG+FP Q S  +  +LEEER
Sbjct:  193 LLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEER 596          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20618.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D5DGX9_9GAMM1.270e-20271.29DNA helicase n=1 Tax=Gammaproteobacteria bacterium... [more]
A0A1Z9ULR5_9GAMM4.180e-18666.83DNA helicase n=3 Tax=Gammaproteobacteria TaxID=123... [more]
A0A1G0F0J8_9GAMM1.580e-17562.87DNA helicase n=1 Tax=Gammaproteobacteria bacterium... [more]
A0A6L7A204_ECOLX1.130e-17362.13DNA helicase (Fragment) n=6 Tax=Enterobacteriaceae... [more]
A0A521RBW8_9GAMM4.470e-17365.43DNA helicase n=1 Tax=Gammaproteobacteria bacterium... [more]
A0A3M1DI60_9GAMM8.230e-17363.12DNA helicase n=1 Tax=Gammaproteobacteria bacterium... [more]
A0A5B8HED1_9GAMM8.490e-17362.13DNA helicase n=57 Tax=root TaxID=1 RepID=A0A5B8HED... [more]
A0A7U7FAB1_YEREN3.410e-17261.39DNA helicase n=211 Tax=Enterobacterales TaxID=9134... [more]
A0A2N2AAG4_9GAMM4.680e-17262.72DNA helicase n=2 Tax=Gammaproteobacteria TaxID=123... [more]
UVRD_ECOLI4.830e-17262.13DNA helicase II n=2983 Tax=root TaxID=1 RepID=UVRD... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20618contigP-wetherbeei_contig20618:1..1212 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog273526.SMDB11_4290
Preferred nameuvrD
PFAMsUvrD-helicase,UvrD_C
Model size1212
Max annot lvl1236|Gammaproteobacteria
KEGG koko:K03657
KEGG Pathwayko03420,ko03430,map03420,map03430
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006289,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0015616,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017116,GO:0022607,GO:0031297,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042623,GO:0042802,GO:0043142,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0045005,GO:0046483,GO:0050896,GO:0051259,GO:0051260,GO:0051276,GO:0051716,GO:0065003,GO:0070035,GO:0070581,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576
Exons1
Evalue5.57e-168
EggNOG OGsCOG0210@1|root,COG0210@2|Bacteria,1MU0G@1224|Proteobacteria,1RNJI@1236|Gammaproteobacteria,4012N@613|Serratia
EC3.6.4.12
DescriptionUnwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present
Cds size1188
COG categoryL
BRITEko00000,ko00001,ko01000,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186204.738408-CDS-P-wetherbeei_contig20618:0..11881683186204.738408-CDS-P-wetherbeei_contig20618:0..1188Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20618 1..1188 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186204.7519507-UTR-P-wetherbeei_contig20618:1188..12121683186204.7519507-UTR-P-wetherbeei_contig20618:1188..1212Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig20618 1189..1212 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20618.1.1prot_P-wetherbeei_contig20618.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20618 1..1188 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20618.1.1

>prot_P-wetherbeei_contig20618.1.1 ID=prot_P-wetherbeei_contig20618.1.1|Name=mRNA_P-wetherbeei_contig20618.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=396bp
MAHPGLLRHYRERFWHVLVDEFQDTNAIQYAWLKNLVGDDGNIFVVGDDD
QSIYSWRGARVENMQHFRKDFPNNELVRLEQNYRSTGNILSAANTLIANN
PSRLGKELWTDGAKGEPITLYAAYNDLDEARFCVDRIRLWHDHGGRLTES
AMLYRTSAQSRVLEDALRQADLPYRVYGGFRFYERAEIKDALAYVRLATS
RADDAAFERIVNVPPRGIGQRSIDELREVAKRERITLWEATRRLTDTKEL
SARSLGALQRFLDLIDRLSIAVTELPLPELLEHVIAHSGLIEHYKKEKGE
RGLDRIDNLEELVTAARDFKPAIDDEEIPILAAFLTHAALESGDGQAEAY
SDCVQLMTLHSAKGLEFPLVFLVGVEEGLFPHQRSAADPVQLEEER
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mRNA from alignment at P-wetherbeei_contig20618:1..1212-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20618.1.1 ID=mRNA_P-wetherbeei_contig20618.1.1|Name=mRNA_P-wetherbeei_contig20618.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1212bp|location=Sequence derived from alignment at P-wetherbeei_contig20618:1..1212- (Phaeothamnion wetherbeei SAG_119_79)
CTGTTGCGCGCCCATGAGCTGTGGATGGCTCATCCAGGGCTCCTGCGTCA CTATCGCGAGCGCTTCTGGCATGTGCTGGTCGACGAGTTCCAGGACACCA ATGCCATCCAGTACGCCTGGCTGAAGAACCTGGTGGGCGACGATGGCAAT ATCTTCGTGGTCGGCGATGACGACCAGTCCATCTATAGCTGGCGCGGCGC ACGCGTCGAGAACATGCAGCATTTCCGCAAGGATTTTCCCAACAACGAAC TGGTACGCCTGGAACAGAACTACCGATCTACCGGCAATATCCTGTCCGCC GCTAATACCCTTATTGCCAACAATCCCTCGCGTCTCGGCAAGGAGTTGTG GACCGACGGCGCGAAGGGCGAGCCCATCACCCTCTACGCGGCCTATAACG ATCTTGATGAAGCACGCTTCTGCGTTGATCGCATCCGCCTGTGGCATGAC CATGGCGGGCGGCTCACCGAGAGCGCCATGCTTTATCGCACCAGCGCCCA GTCGCGGGTGCTGGAAGACGCGCTGCGCCAGGCTGATCTGCCCTATCGCG TGTATGGCGGCTTCCGCTTTTATGAACGTGCCGAAATCAAGGACGCGCTG GCCTATGTGCGCCTCGCGACCTCACGTGCTGATGACGCCGCCTTTGAACG CATCGTCAACGTGCCGCCGCGCGGTATCGGTCAGCGCTCCATTGATGAAC TGCGCGAAGTCGCCAAGCGTGAGCGCATCACGCTGTGGGAGGCGACCCGT CGCCTGACCGACACCAAGGAACTCTCCGCTCGCTCGCTCGGCGCCCTGCA GCGCTTTCTCGATCTCATCGATCGCCTGAGCATCGCAGTCACGGAATTGC CGCTGCCGGAGTTGCTCGAACATGTCATCGCCCATTCGGGCCTGATCGAA CATTACAAGAAGGAGAAAGGCGAACGCGGCCTCGACCGCATCGACAACCT GGAAGAACTGGTCACTGCCGCACGTGACTTCAAGCCTGCCATCGACGACG AGGAGATCCCGATATTGGCGGCCTTTCTGACCCACGCCGCGCTGGAATCG GGTGACGGACAGGCCGAAGCCTACAGCGACTGCGTACAACTCATGACCCT GCATTCGGCCAAGGGTCTCGAGTTTCCGCTGGTATTCCTGGTCGGTGTCG AGGAGGGACTGTTTCCGCATCAGCGCTCGGCGGCCGACCCGGTGCAACTC GAGGAAGAGCGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20618:1..1212-

>mRNA_P-wetherbeei_contig20618.1.1 ID=mRNA_P-wetherbeei_contig20618.1.1|Name=mRNA_P-wetherbeei_contig20618.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1188bp|location=Sequence derived from alignment at P-wetherbeei_contig20618:1..1212- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTCATCCAGGGCTCCTGCGTCACTATCGCGAGCGCTTCTGGCATGT
GCTGGTCGACGAGTTCCAGGACACCAATGCCATCCAGTACGCCTGGCTGA
AGAACCTGGTGGGCGACGATGGCAATATCTTCGTGGTCGGCGATGACGAC
CAGTCCATCTATAGCTGGCGCGGCGCACGCGTCGAGAACATGCAGCATTT
CCGCAAGGATTTTCCCAACAACGAACTGGTACGCCTGGAACAGAACTACC
GATCTACCGGCAATATCCTGTCCGCCGCTAATACCCTTATTGCCAACAAT
CCCTCGCGTCTCGGCAAGGAGTTGTGGACCGACGGCGCGAAGGGCGAGCC
CATCACCCTCTACGCGGCCTATAACGATCTTGATGAAGCACGCTTCTGCG
TTGATCGCATCCGCCTGTGGCATGACCATGGCGGGCGGCTCACCGAGAGC
GCCATGCTTTATCGCACCAGCGCCCAGTCGCGGGTGCTGGAAGACGCGCT
GCGCCAGGCTGATCTGCCCTATCGCGTGTATGGCGGCTTCCGCTTTTATG
AACGTGCCGAAATCAAGGACGCGCTGGCCTATGTGCGCCTCGCGACCTCA
CGTGCTGATGACGCCGCCTTTGAACGCATCGTCAACGTGCCGCCGCGCGG
TATCGGTCAGCGCTCCATTGATGAACTGCGCGAAGTCGCCAAGCGTGAGC
GCATCACGCTGTGGGAGGCGACCCGTCGCCTGACCGACACCAAGGAACTC
TCCGCTCGCTCGCTCGGCGCCCTGCAGCGCTTTCTCGATCTCATCGATCG
CCTGAGCATCGCAGTCACGGAATTGCCGCTGCCGGAGTTGCTCGAACATG
TCATCGCCCATTCGGGCCTGATCGAACATTACAAGAAGGAGAAAGGCGAA
CGCGGCCTCGACCGCATCGACAACCTGGAAGAACTGGTCACTGCCGCACG
TGACTTCAAGCCTGCCATCGACGACGAGGAGATCCCGATATTGGCGGCCT
TTCTGACCCACGCCGCGCTGGAATCGGGTGACGGACAGGCCGAAGCCTAC
AGCGACTGCGTACAACTCATGACCCTGCATTCGGCCAAGGGTCTCGAGTT
TCCGCTGGTATTCCTGGTCGGTGTCGAGGAGGGACTGTTTCCGCATCAGC
GCTCGGCGGCCGACCCGGTGCAACTCGAGGAAGAGCGG
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