mRNA_P-wetherbeei_contig20611.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20611.1.1
Unique NamemRNA_P-wetherbeei_contig20611.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20611.1.1 vs. uniprot
Match: A0A1F3AC09_9PROT (Putrescine/spermidine ABC transporter permease n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1F3AC09_9PROT)

HSP 1 Score: 444 bits (1141), Expect = 2.710e-156
Identity = 230/245 (93.88%), Postives = 234/245 (95.51%), Query Frame = 1
Query:    1 MRFVIALPFLWLGVFFLLPFALVLAIALGTNAPDSVPPVELGISLKSFTLLFTDDLYLAAWLTSLRIAATSTLVALLLGYPMAYAIARAAPARRPLLLMLVVLPFWTSFLIRVYAWMGLLDENGLLNQFLRWSGIAADPGTILGTEWAVHLGIVYAYLPFMVLPLYATLEKLDTGLLEAAADLGATPFKAFLTITLPLSVPGIVAGCLLVFIPAVGEFVIPDLLGGTETLMIGKVLWDEFFTNAD 735
            MR +I LPFLWLGVFFLLPFALVL IALGTNAPDSVPPV LG SLKSFTLLFTDDLYLAAWLTSLRIAATSTLVALLLGYPMAYAIARAAP RRPLLLMLVVLPFWTSFLIRVYAWMGLLDENGLLNQFLRWSG+A DPGTILGTEWAVHLGIVYAYLPFMVLPLYA LEKLD GLLEAAADLGA P +AFLTITLPLS+PGIVAGCLLVFIPAVGEFVIPDLLGGTETLMIGKVLWDEFFTNAD
Sbjct:    1 MRAIITLPFLWLGVFFLLPFALVLVIALGTNAPDSVPPVALGFSLKSFTLLFTDDLYLAAWLTSLRIAATSTLVALLLGYPMAYAIARAAPERRPLLLMLVVLPFWTSFLIRVYAWMGLLDENGLLNQFLRWSGLATDPGTILGTEWAVHLGIVYAYLPFMVLPLYAVLEKLDAGLLEAAADLGARPIQAFLTITLPLSLPGIVAGCLLVFIPAVGEFVIPDLLGGTETLMIGKVLWDEFFTNAD 245          
BLAST of mRNA_P-wetherbeei_contig20611.1.1 vs. uniprot
Match: A0A259MLR5_9PROT (Putrescine/spermidine ABC transporter permease n=5 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A259MLR5_9PROT)

HSP 1 Score: 424 bits (1090), Expect = 1.590e-148
Identity = 218/245 (88.98%), Postives = 230/245 (93.88%), Query Frame = 1
Query:    1 MRFVIALPFLWLGVFFLLPFALVLAIALGTNAPDSVPPVELGISLKSFTLLFTDDLYLAAWLTSLRIAATSTLVALLLGYPMAYAIARAAPARRPLLLMLVVLPFWTSFLIRVYAWMGLLDENGLLNQFLRWSGIAADPGTILGTEWAVHLGIVYAYLPFMVLPLYATLEKLDTGLLEAAADLGATPFKAFLTITLPLSVPGIVAGCLLVFIPAVGEFVIPDLLGGTETLMIGKVLWDEFFTNAD 735
            MRFVI LPFLWLG+FFLLP  LVLAI+LGT APDSVPPVELG S KSF LLF+DDLYLAAWL+SLRIAATSTLVALLLGYPMAYAIARAAP RRPLLLMLVVLPFWTSFLIR+YAWMGLL +NGL+ QFLRWSG+A++PGTILGTEWAVHLGIVYAYLPFMVLPLYATLEKLD  LLEAAADLGA PF AFLT+TLPLS+PGIVAGCLLVFIPAVGEFVIPDLLGGTETLMIGKVLWDEFFTN D
Sbjct:    1 MRFVIGLPFLWLGIFFLLPCLLVLAISLGTYAPDSVPPVELGFSFKSFALLFSDDLYLAAWLSSLRIAATSTLVALLLGYPMAYAIARAAPNRRPLLLMLVVLPFWTSFLIRIYAWMGLLADNGLIEQFLRWSGLASNPGTILGTEWAVHLGIVYAYLPFMVLPLYATLEKLDDSLLEAAADLGAKPFAAFLTVTLPLSLPGIVAGCLLVFIPAVGEFVIPDLLGGTETLMIGKVLWDEFFTNGD 245          
BLAST of mRNA_P-wetherbeei_contig20611.1.1 vs. uniprot
Match: A0A521QHJ2_9HYPH (ABC transporter permease subunit n=2 Tax=Reyranella TaxID=445219 RepID=A0A521QHJ2_9HYPH)

HSP 1 Score: 422 bits (1086), Expect = 6.460e-148
Identity = 216/245 (88.16%), Postives = 231/245 (94.29%), Query Frame = 1
Query:    1 MRFVIALPFLWLGVFFLLPFALVLAIALGTNAPDSVPPVELGISLKSFTLLFTDDLYLAAWLTSLRIAATSTLVALLLGYPMAYAIARAAPARRPLLLMLVVLPFWTSFLIRVYAWMGLLDENGLLNQFLRWSGIAADPGTILGTEWAVHLGIVYAYLPFMVLPLYATLEKLDTGLLEAAADLGATPFKAFLTITLPLSVPGIVAGCLLVFIPAVGEFVIPDLLGGTETLMIGKVLWDEFFTNAD 735
            MR+ IALPFLWL VFFLLPFALVLAIALGTNAPD  PPVELG SLK+F LLF+DDLY+AAWL+SLRIAATSTL+ALLLGYPMAYAIARA P RRPLLLMLVVLPFWTSFLIR+YAWMGLL +NGL++QFLRWSGIA +PG+ILGTEWAVHLGIVYAYLPFMVLPLYATLEKLDT LLEAAADLGA P  AFLTITLPLS+PGIVAGCLLVFIP++GEFVIPDLLGGTETLMIGKVLWDEFFTNAD
Sbjct:    1 MRYAIALPFLWLAVFFLLPFALVLAIALGTNAPDVAPPVELGFSLKNFALLFSDDLYVAAWLSSLRIAATSTLIALLLGYPMAYAIARARPERRPLLLMLVVLPFWTSFLIRIYAWMGLLAKNGLIDQFLRWSGIAENPGSILGTEWAVHLGIVYAYLPFMVLPLYATLEKLDTSLLEAAADLGARPLTAFLTITLPLSLPGIVAGCLLVFIPSIGEFVIPDLLGGTETLMIGKVLWDEFFTNAD 245          
BLAST of mRNA_P-wetherbeei_contig20611.1.1 vs. uniprot
Match: A0A521L1D3_9HYPH (ABC transporter permease subunit n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521L1D3_9HYPH)

HSP 1 Score: 416 bits (1069), Expect = 2.420e-145
Identity = 212/245 (86.53%), Postives = 229/245 (93.47%), Query Frame = 1
Query:    1 MRFVIALPFLWLGVFFLLPFALVLAIALGTNAPDSVPPVELGISLKSFTLLFTDDLYLAAWLTSLRIAATSTLVALLLGYPMAYAIARAAPARRPLLLMLVVLPFWTSFLIRVYAWMGLLDENGLLNQFLRWSGIAADPGTILGTEWAVHLGIVYAYLPFMVLPLYATLEKLDTGLLEAAADLGATPFKAFLTITLPLSVPGIVAGCLLVFIPAVGEFVIPDLLGGTETLMIGKVLWDEFFTNAD 735
            MR VI +PFLWLGVFF LPFALV AIALGTN PD VPPVELG S K+F LLF+DDLYLAAWL+S+RIAATSTL+ALLLGYPMAYAIARAAP RRPLLLMLVVLPFWTSFLIR+YAWMGLL  NG ++QFLRW+GIA +PGTILGTEWAVHLGIVYAYLPFMVLPLYATLEKLDTGLLEAA+DLGA P++AFLT+TLPLS PGIVAGCLLVFIP+VGEFVIPDLLGGT+TLMIGKVLWDEFFTNAD
Sbjct:    1 MRAVIGVPFLWLGVFFALPFALVFAIALGTNNPDLVPPVELGFSFKNFALLFSDDLYLAAWLSSIRIAATSTLIALLLGYPMAYAIARAAPNRRPLLLMLVVLPFWTSFLIRIYAWMGLLASNGTIDQFLRWTGIADNPGTILGTEWAVHLGIVYAYLPFMVLPLYATLEKLDTGLLEAASDLGARPWQAFLTVTLPLSFPGIVAGCLLVFIPSVGEFVIPDLLGGTDTLMIGKVLWDEFFTNAD 245          
BLAST of mRNA_P-wetherbeei_contig20611.1.1 vs. uniprot
Match: A0A1H8W7D5_9PROT (Putrescine transport system permease protein n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H8W7D5_9PROT)

HSP 1 Score: 404 bits (1039), Expect = 8.970e-141
Identity = 205/245 (83.67%), Postives = 224/245 (91.43%), Query Frame = 1
Query:    1 MRFVIALPFLWLGVFFLLPFALVLAIALGTNAPDSVPPVELGISLKSFTLLFTDDLYLAAWLTSLRIAATSTLVALLLGYPMAYAIARAAPARRPLLLMLVVLPFWTSFLIRVYAWMGLLDENGLLNQFLRWSGIAADPGTILGTEWAVHLGIVYAYLPFMVLPLYATLEKLDTGLLEAAADLGATPFKAFLTITLPLSVPGIVAGCLLVFIPAVGEFVIPDLLGGTETLMIGKVLWDEFFTNAD 735
            MR VIALP++WL  FFLLPFALVLAIA GTN PD+VPP++LG+SLK+FTLLFTDDLYLAAWL SLRIAATSTLV LLLGYPMAYAI RA P+ RPLLLM V+LPFWTSFLIRVYAWMGLL  NG+LNQFLR +G+ ADPGTILGTEWAVHLGIVYAYLPFMVLPLYA+LEKLDT LLEAAADLGA+P  AF T+TLP S+PG+VAGCLLVFIPAVGEFVIPDLLGGT+TLMIGKVLWDEFF N+D
Sbjct:    1 MRLVIALPYVWLATFFLLPFALVLAIAFGTNNPDAVPPIDLGVSLKNFTLLFTDDLYLAAWLGSLRIAATSTLVTLLLGYPMAYAITRARPSLRPLLLMAVILPFWTSFLIRVYAWMGLLSSNGILNQFLRNTGLVADPGTILGTEWAVHLGIVYAYLPFMVLPLYASLEKLDTSLLEAAADLGASPITAFFTVTLPQSLPGVVAGCLLVFIPAVGEFVIPDLLGGTDTLMIGKVLWDEFFLNSD 245          
BLAST of mRNA_P-wetherbeei_contig20611.1.1 vs. uniprot
Match: A0A1T4RLQ0_9HYPH (Putrescine transport system permease protein n=1 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4RLQ0_9HYPH)

HSP 1 Score: 398 bits (1023), Expect = 2.540e-138
Identity = 207/245 (84.49%), Postives = 220/245 (89.80%), Query Frame = 1
Query:    1 MRFVIALPFLWLGVFFLLPFALVLAIALGTNAPDSVPPVELGISLKSFTLLFTDDLYLAAWLTSLRIAATSTLVALLLGYPMAYAIARAAPARRPLLLMLVVLPFWTSFLIRVYAWMGLLDENGLLNQFLRWSGIAADPGTILGTEWAVHLGIVYAYLPFMVLPLYATLEKLDTGLLEAAADLGATPFKAFLTITLPLSVPGIVAGCLLVFIPAVGEFVIPDLLGGTETLMIGKVLWDEFFTNAD 735
            MR VIALPF WL VFFLLPFALVLAI+ GTNAPD+ PPV L  SL +F LLFTDDLY+AAWL+SLRIAATST+  LLLGYPMAYAIARA P RR L LMLVVLPFWTSFLIRVYAWMGLL ENG+LNQFLRW+G+  DPGTILGTEWAVH+GIVYAYLPFMVLPLYATLEKLD  LLEAAADLGA P  AFLT+TLPLS+PG+VAGCLLVFIPAVGEFVIPDLLGGT TLMIGKVLWDEFFTNAD
Sbjct:    1 MRAVIALPFTWLIVFFLLPFALVLAISFGTNAPDAAPPVALTWSLDNFKLLFTDDLYVAAWLSSLRIAATSTIATLLLGYPMAYAIARARPERRSLPLMLVVLPFWTSFLIRVYAWMGLLAENGILNQFLRWTGLVPDPGTILGTEWAVHIGIVYAYLPFMVLPLYATLEKLDWSLLEAAADLGARPVAAFLTVTLPLSLPGVVAGCLLVFIPAVGEFVIPDLLGGTGTLMIGKVLWDEFFTNAD 245          
BLAST of mRNA_P-wetherbeei_contig20611.1.1 vs. uniprot
Match: A0A5C8PS04_9HYPH (ABC transporter permease subunit n=2 Tax=Vineibacter terrae TaxID=2586908 RepID=A0A5C8PS04_9HYPH)

HSP 1 Score: 356 bits (913), Expect = 3.310e-121
Identity = 185/244 (75.82%), Postives = 207/244 (84.84%), Query Frame = 1
Query:    4 RFVIALPFLWLGVFFLLPFALVLAIALGTNAPDSVPPVELGISLKSFTLLFTDDLYLAAWLTSLRIAATSTLVALLLGYPMAYAIARAAPARRPLLLMLVVLPFWTSFLIRVYAWMGLLDENGLLNQFLRWSGIAADPGTILGTEWAVHLGIVYAYLPFMVLPLYATLEKLDTGLLEAAADLGATPFKAFLTITLPLSVPGIVAGCLLVFIPAVGEFVIPDLLGGTETLMIGKVLWDEFFTNAD 735
            R VIALP+LWL +FF  PF +V AI+LG N PD+VPPV L  S K++  LF D LY AA+L SLRIAA +TL  LL+GYPMAYAIARA    R  LLM V+LPFWTSFLIR+YAWMG+L ENGLLNQFLR SG+ ADPGTILGTEWA++LGI YAYLPFMVLPLYA LEKLD  LLEAAADLGA P++AFLT+TLPLS+PGIV GCLLVFIPAVGEFVIPDLLGGTETLMIGKVLWDEFF+N+D
Sbjct:   28 RLVIALPYLWLLLFFAAPFLIVAAISLGENTPDTVPPVTLTGSGKTYVQLFADALYPAAYLNSLRIAAIATLATLLIGYPMAYAIARAPAGWRGPLLMAVILPFWTSFLIRIYAWMGILSENGLLNQFLRGSGLVADPGTILGTEWAIYLGIAYAYLPFMVLPLYAVLEKLDVSLLEAAADLGARPWRAFLTVTLPLSLPGIVGGCLLVFIPAVGEFVIPDLLGGTETLMIGKVLWDEFFSNSD 271          
BLAST of mRNA_P-wetherbeei_contig20611.1.1 vs. uniprot
Match: A0A5C5S8Z3_9HYPH (ABC transporter permease subunit n=1 Tax=Reyranella sp. CPCC 100927 TaxID=2599616 RepID=A0A5C5S8Z3_9HYPH)

HSP 1 Score: 340 bits (873), Expect = 2.380e-115
Identity = 177/244 (72.54%), Postives = 201/244 (82.38%), Query Frame = 1
Query:    4 RFVIALPFLWLGVFFLLPFALVLAIALGTNAPDSVPPVELGISLKSFTLLFTDDLYLAAWLTSLRIAATSTLVALLLGYPMAYAIARAAPARRPLLLMLVVLPFWTSFLIRVYAWMGLLDENGLLNQFLRWSGIAADPGTILGTEWAVHLGIVYAYLPFMVLPLYATLEKLDTGLLEAAADLGATPFKAFLTITLPLSVPGIVAGCLLVFIPAVGEFVIPDLLGGTETLMIGKVLWDEFFTNAD 735
            R VIALP+LWL +FF  PF +V AI+   N PD+VPPV L  S +S+T L  D LY AA+L SLRIAA +TL+ LL+GYPMAY IARA    R  LLM V+LPFWTSFLIR+YAW G+L ENGLLNQ LR SG+  DPGT+LGTEWA++LGI YAYLPFMVLPLYA LEKLD  LLEAAADLGA P +AFLT+TLPLS+PGI+ GCLLVFIPAVGEFVIPDLLGGTETLMIGKVLWDEFF+N+D
Sbjct:   14 RIVIALPYLWLLLFFAAPFIIVAAISFADNTPDTVPPVTLSGSGRSYTQLAADALYPAAYLNSLRIAAIATLITLLIGYPMAYGIARAPAGWRGPLLMAVILPFWTSFLIRIYAWKGILSENGLLNQVLRGSGLVEDPGTLLGTEWAIYLGIAYAYLPFMVLPLYAVLEKLDRSLLEAAADLGARPERAFLTVTLPLSLPGIMGGCLLVFIPAVGEFVIPDLLGGTETLMIGKVLWDEFFSNSD 257          
BLAST of mRNA_P-wetherbeei_contig20611.1.1 vs. uniprot
Match: Q2RVM8_RHORT (Binding-protein-dependent transport systems inner membrane component n=2 Tax=Rhodospirillum rubrum TaxID=1085 RepID=Q2RVM8_RHORT)

HSP 1 Score: 299 bits (766), Expect = 1.660e-98
Identity = 159/256 (62.11%), Postives = 195/256 (76.17%), Query Frame = 1
Query:    4 RFVIALPFLWLGVFFLLPFALVLAIALGTNAPDSVPP------------VELGISLKSFTLLFTDDLYLAAWLTSLRIAATSTLVALLLGYPMAYAIARAAPARRPLLLMLVVLPFWTSFLIRVYAWMGLLDENGLLNQFLRWSGIAADPGTILGTEWAVHLGIVYAYLPFMVLPLYATLEKLDTGLLEAAADLGATPFKAFLTITLPLSVPGIVAGCLLVFIPAVGEFVIPDLLGGTETLMIGKVLWDEFFTNAD 735
            R VI +P++WL +FF+LPFA+VL I+        VPP            + L ++L ++  +  D++Y+ A+L SLRIA  ST++ALL+GYPMAY IARA    R +LL LV+LPFWTSFLIRVYAWMG+L  NGLLN FL W+G+   P TI+GTEWAV +GIVY+YLPFMVLPLYATLEKLD  LLEAA DLG  P+KAFLTITLPLSVPGI+AG +LVFIP+VGEFVIP+LLGG +T MIG+VLW+EFF N D
Sbjct:   39 RLVILVPYVWLLLFFVLPFAIVLKISFA-EFRVGVPPYTALIDFTQDAYLRLTLALSNYKYMLDDEMYVIAYLNSLRIAGISTVLALLIGYPMAYGIARAPKGPRTILLFLVILPFWTSFLIRVYAWMGILKGNGLLNTFLIWTGVIDQPLTIMGTEWAVFIGIVYSYLPFMVLPLYATLEKLDPSLLEAAHDLGCRPWKAFLTITLPLSVPGIIAGSMLVFIPSVGEFVIPELLGGADTFMIGRVLWNEFFLNRD 293          
BLAST of mRNA_P-wetherbeei_contig20611.1.1 vs. uniprot
Match: UPI00115C67B7 (ABC transporter permease subunit n=1 Tax=Telmatospirillum sp. J64-1 TaxID=2502183 RepID=UPI00115C67B7)

HSP 1 Score: 297 bits (761), Expect = 6.630e-98
Identity = 160/254 (62.99%), Postives = 196/254 (77.17%), Query Frame = 1
Query:   10 VIALPFLWLGVFFLLPFALVLAIALGTNAPDSVPP------------VELGISLKSFTLLFTDDLYLAAWLTSLRIAATSTLVALLLGYPMAYAIARAAPARRPLLLMLVVLPFWTSFLIRVYAWMGLLDENGLLNQFLRWSGIAADPGTILGTEWAVHLGIVYAYLPFMVLPLYATLEKLDTGLLEAAADLGATPFKAFLTITLPLSVPGIVAGCLLVFIPAVGEFVIPDLLGGTETLMIGKVLWDEFFTNAD 735
            V ALP+LWL +FFL+PFA+V  I+   +   ++PP            +++ ++L ++ +LF D LYLAA+L S++IAA STLV LL+GYPMAY IAR++ A R  LLML++LPFWTSFLIRVYAW+GLL   GL+N FL W G+   P  +L T +AV++GIVY+YLPFM+LPLYATLEK+D  LLEAAADLG  PFKAFLTITLPLS+PGIVAG LLVFIPAVGEFVIPDLLGG  TLMIGKVLW +FF N D
Sbjct:   33 VTALPYLWLVLFFLIPFAIVFKISFSESI-RAIPPYAPLFEMVDDTFLQIRLNLANYMMLFEDRLYLAAYLNSIKIAAISTLVCLLIGYPMAYGIARSSKAVRNGLLMLIILPFWTSFLIRVYAWIGLLKNEGLINNFLLWLGLIDQPLPMLYTPFAVYVGIVYSYLPFMILPLYATLEKMDMSLLEAAADLGCKPFKAFLTITLPLSLPGIVAGSLLVFIPAVGEFVIPDLLGGPSTLMIGKVLWTDFFNNRD 285          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20611.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F3AC09_9PROT2.710e-15693.88Putrescine/spermidine ABC transporter permease n=2... [more]
A0A259MLR5_9PROT1.590e-14888.98Putrescine/spermidine ABC transporter permease n=5... [more]
A0A521QHJ2_9HYPH6.460e-14888.16ABC transporter permease subunit n=2 Tax=Reyranell... [more]
A0A521L1D3_9HYPH2.420e-14586.53ABC transporter permease subunit n=1 Tax=Reyranell... [more]
A0A1H8W7D5_9PROT8.970e-14183.67Putrescine transport system permease protein n=4 T... [more]
A0A1T4RLQ0_9HYPH2.540e-13884.49Putrescine transport system permease protein n=1 T... [more]
A0A5C8PS04_9HYPH3.310e-12175.82ABC transporter permease subunit n=2 Tax=Vineibact... [more]
A0A5C5S8Z3_9HYPH2.380e-11572.54ABC transporter permease subunit n=1 Tax=Reyranell... [more]
Q2RVM8_RHORT1.660e-9862.11Binding-protein-dependent transport systems inner ... [more]
UPI00115C67B76.630e-9862.99ABC transporter permease subunit n=1 Tax=Telmatosp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20611contigP-wetherbeei_contig20611:1..735 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1205680.CAKO01000002_gene2981
PFAMsBPD_transp_1
Model size735
Max annot lvl204441|Rhodospirillales
KEGG koko:K11071
KEGG TC3.A.1.11.1
KEGG Pathwayko02010,map02010
KEGG ModuleM00299
Hectar predicted targeting categorysignal peptide
Exons1
Evalue7.13e-147
EggNOG OGsCOG1176@1|root,COG1176@2|Bacteria,1MVGM@1224|Proteobacteria,2TSFD@28211|Alphaproteobacteria,2JRN1@204441|Rhodospirillales
DescriptionBinding-protein-dependent transport system inner membrane component
Cds size735
COG categoryE
BRITEko00000,ko00001,ko00002,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186204.6014392-CDS-P-wetherbeei_contig20611:0..7351683186204.6014392-CDS-P-wetherbeei_contig20611:0..735Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20611 1..735 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20611.1.1prot_P-wetherbeei_contig20611.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20611 1..735 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20611.1.1

>prot_P-wetherbeei_contig20611.1.1 ID=prot_P-wetherbeei_contig20611.1.1|Name=mRNA_P-wetherbeei_contig20611.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=245bp
MRFVIALPFLWLGVFFLLPFALVLAIALGTNAPDSVPPVELGISLKSFTL
LFTDDLYLAAWLTSLRIAATSTLVALLLGYPMAYAIARAAPARRPLLLML
VVLPFWTSFLIRVYAWMGLLDENGLLNQFLRWSGIAADPGTILGTEWAVH
LGIVYAYLPFMVLPLYATLEKLDTGLLEAAADLGATPFKAFLTITLPLSV
PGIVAGCLLVFIPAVGEFVIPDLLGGTETLMIGKVLWDEFFTNAD
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mRNA from alignment at P-wetherbeei_contig20611:1..735-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20611.1.1 ID=mRNA_P-wetherbeei_contig20611.1.1|Name=mRNA_P-wetherbeei_contig20611.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=735bp|location=Sequence derived from alignment at P-wetherbeei_contig20611:1..735- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGCTTCGTCATCGCGCTTCCCTTCCTGTGGCTCGGGGTCTTCTTCCT GCTGCCGTTCGCGCTGGTGCTGGCGATCGCGCTCGGCACCAACGCGCCCG ACTCGGTGCCGCCGGTCGAGCTTGGGATCAGCCTGAAAAGTTTTACGCTG CTGTTCACCGACGATCTCTACCTCGCGGCGTGGCTCACCTCGCTGCGCAT CGCCGCCACCTCGACATTGGTCGCCCTCCTGCTGGGCTACCCCATGGCCT ACGCCATCGCGCGCGCCGCGCCTGCCCGCCGGCCGCTGCTGCTGATGCTG GTGGTGCTGCCGTTCTGGACTTCGTTTCTGATCCGGGTCTACGCCTGGAT GGGCCTGCTGGACGAAAACGGTCTCCTCAACCAGTTCCTGCGCTGGAGCG GGATCGCCGCCGATCCCGGCACGATCCTGGGCACCGAATGGGCGGTCCAT CTCGGCATCGTCTACGCTTACCTCCCCTTCATGGTGCTGCCGCTCTACGC CACCTTGGAGAAGCTCGACACCGGCCTGCTCGAGGCCGCGGCCGATCTCG GTGCCACGCCGTTCAAAGCCTTCCTCACCATCACCCTGCCGTTGTCGGTG CCCGGCATCGTCGCCGGCTGCCTGCTGGTGTTCATCCCCGCGGTCGGCGA GTTCGTGATCCCCGACCTGCTGGGCGGCACCGAGACGCTGATGATCGGCA AGGTGCTGTGGGACGAATTCTTCACCAATGCCGAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20611:1..735-

>mRNA_P-wetherbeei_contig20611.1.1 ID=mRNA_P-wetherbeei_contig20611.1.1|Name=mRNA_P-wetherbeei_contig20611.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=735bp|location=Sequence derived from alignment at P-wetherbeei_contig20611:1..735- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGCTTCGTCATCGCGCTTCCCTTCCTGTGGCTCGGGGTCTTCTTCCT
GCTGCCGTTCGCGCTGGTGCTGGCGATCGCGCTCGGCACCAACGCGCCCG
ACTCGGTGCCGCCGGTCGAGCTTGGGATCAGCCTGAAAAGTTTTACGCTG
CTGTTCACCGACGATCTCTACCTCGCGGCGTGGCTCACCTCGCTGCGCAT
CGCCGCCACCTCGACATTGGTCGCCCTCCTGCTGGGCTACCCCATGGCCT
ACGCCATCGCGCGCGCCGCGCCTGCCCGCCGGCCGCTGCTGCTGATGCTG
GTGGTGCTGCCGTTCTGGACTTCGTTTCTGATCCGGGTCTACGCCTGGAT
GGGCCTGCTGGACGAAAACGGTCTCCTCAACCAGTTCCTGCGCTGGAGCG
GGATCGCCGCCGATCCCGGCACGATCCTGGGCACCGAATGGGCGGTCCAT
CTCGGCATCGTCTACGCTTACCTCCCCTTCATGGTGCTGCCGCTCTACGC
CACCTTGGAGAAGCTCGACACCGGCCTGCTCGAGGCCGCGGCCGATCTCG
GTGCCACGCCGTTCAAAGCCTTCCTCACCATCACCCTGCCGTTGTCGGTG
CCCGGCATCGTCGCCGGCTGCCTGCTGGTGTTCATCCCCGCGGTCGGCGA
GTTCGTGATCCCCGACCTGCTGGGCGGCACCGAGACGCTGATGATCGGCA
AGGTGCTGTGGGACGAATTCTTCACCAATGCCGAC
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