mRNA_P-wetherbeei_contig2061.1.4 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig2061.1.4
Unique NamemRNA_P-wetherbeei_contig2061.1.4
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig2061.1.4 vs. uniprot
Match: D8LEH7_ECTSI (Proteasome endopeptidase complex n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEH7_ECTSI)

HSP 1 Score: 209 bits (533), Expect = 5.380e-63
Identity = 110/232 (47.41%), Postives = 146/232 (62.93%), Query Frame = 2
Query:  125 AARGVSMGTTLVAAKFDGGVVLGADSRTSSGAYVAHRFAEKMDQVHRSIVLCRSGSAADTQFVAETVAVRLEGYELTCDRAPSVRTAATLVKNLCYQHRDTFSASIVCAGWDPRKGASIYIIPPGGALLEQEYALSGSGSAYITGYCDEHFDRRSGAGSNDXXXXXXXXXXXXXXXXXXXXXXXSSALSREECIERVRHAVELAIARDTASGGVVRLCIVDRNGVERRVIVP 820
            AA G+   TTLVAA+FDGGVV+GADSRTS G++VA+   +K+  V   + L RSGS+ADTQFVA  +  +LE Y     R P+VR AAT  +NLCY ++D  SA I+CAGWD R+G S++ +P GG+LLEQ +A+SGSG+ Y  GYCD++   R G G                               R+EC+  VR A+E+A+ RD ASGGV+RLC+V  +GVER  +VP
Sbjct:   15 AAAGLVDATTLVAARFDGGVVIGADSRTSQGSFVANSGTDKITPVSPGVFLARSGSSADTQFVAGVIEAKLEAYRTEFGRYPTVRAAATATRNLCYANKDQLSAGIICAGWDSREGGSVFSVPQGGSLLEQPFAVSGSGAVYALGYCDDNL--RPGLG-------------------------------RDECVSHVRTALEMAVRRDGASGGVIRLCVVSADGVERWTVVP 213          
BLAST of mRNA_P-wetherbeei_contig2061.1.4 vs. uniprot
Match: A0A2G5B312_COERN (Proteasome subunit beta n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5B312_COERN)

HSP 1 Score: 199 bits (505), Expect = 3.470e-59
Identity = 105/225 (46.67%), Postives = 144/225 (64.00%), Query Frame = 2
Query:  137 VSMGTTLVAAKFDGGVVLGADSRTSSGAYVAHRFAEKMDQVHRSIVLCRSGSAADTQFVAETVAVRLEGYELTCDRAPSVRTAATLVKNLCYQHRDTFSASIVCAGWDPRKGASIYIIPPGGALLEQEYALSGSGSAYITGYCDEHFDRRSGAGSNDXXXXXXXXXXXXXXXXXXXXXXXSSALSREECIERVRHAVELAIARDTASGGVVRLCIVDRNGVERRV 811
            V++GTT++A KFDGGVV+GADSRTS+G YVA+R  +K+ +VH  I  CRSGSAADTQ VA+ V   L+ Y    D  P+V  AA+L + +CYQ+++  SA I+  GWD + GAS+Y +P GG+L ++EY++ GSGSAYI GYCD+ F  R G                               +S+EEC+E V++AV LA+ RD +SGGV+R  ++  NGVER V
Sbjct:    9 VNLGTTIMAVKFDGGVVIGADSRTSTGPYVANRVTDKLTKVHDQIYCCRSGSAADTQAVADIVKYYLDLYTAQHDEPPTVSVAASLFQEICYQNKNNLSAGIIVGGWDKQNGASVYNVPLGGSLHKEEYSIGGSGSAYIYGYCDKTF--RPG-------------------------------MSKEECLEFVKNAVSLAMTRDGSSGGVIRTAVITENGVERSV 200          
BLAST of mRNA_P-wetherbeei_contig2061.1.4 vs. uniprot
Match: A0A1Y1WB45_9FUNG (Proteasome subunit beta n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1WB45_9FUNG)

HSP 1 Score: 196 bits (499), Expect = 2.760e-58
Identity = 104/230 (45.22%), Postives = 147/230 (63.91%), Query Frame = 2
Query:  137 VSMGTTLVAAKFDGGVVLGADSRTSSGAYVAHRFAEKMDQVHRSIVLCRSGSAADTQFVAETVAVRLEGYELTCDRAPSVRTAATLVKNLCYQHRDTFSASIVCAGWDPRKGASIYIIPPGGALLEQEYALSGSGSAYITGYCDEHFDRRSGAGSNDXXXXXXXXXXXXXXXXXXXXXXXSSALSREECIERVRHAVELAIARDTASGGVVRLCIVDRNGVERRVIVPRD 826
            V++GTT++A +FDGGVV+GADSRT++GAY+A+R  +K+ ++H  I  CRSGSAADTQ VA+ V   ++ Y      AP+V+ AA+L + +CYQ+++  SA I+ AGWD R GAS+Y IP GG+L  + +A+ GSGS YI GYCD+ F                                    LSR+ECIE V+++V LA+ RD +SGGVVRL ++ ++GVER+  VP D
Sbjct:    9 VNLGTTIMAVQFDGGVVVGADSRTTTGAYIANRVTDKLTKIHDRIYCCRSGSAADTQAVADIVQYHMQMYTAQHGEAPTVKVAASLFQEICYQNKNNLSAGIIVAGWDERDGASVYNIPLGGSLHREPFAIGGSGSTYIYGYCDKVF---------------------------------RPDLSRDECIEFVKNSVSLAMTRDGSSGGVVRLAVITKDGVERQ-FVPGD 204          
BLAST of mRNA_P-wetherbeei_contig2061.1.4 vs. uniprot
Match: A0A7S4KMV0_9EUKA (Proteasome subunit beta n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KMV0_9EUKA)

HSP 1 Score: 196 bits (498), Expect = 8.750e-58
Identity = 101/225 (44.89%), Postives = 142/225 (63.11%), Query Frame = 2
Query:  140 SMGTTLVAAKFDGGVVLGADSRTSSGAYVAHRFAEKMDQVHRSIVLCRSGSAADTQFVAETVAVRLEGYELTCDRAPSVRTAATLVKNLCYQHRDTFSASIVCAGWDPRKGASIYIIPPGGALLEQEYALSGSGSAYITGYCDEHFDRRSGAGSNDXXXXXXXXXXXXXXXXXXXXXXXSSALSREECIERVRHAVELAIARDTASGGVVRLCIVDRNGVERRVI 814
            SMGT+++A +FDGGVV+ ADSRTS+G YV++R ++K+  VH  I+ CRSGSAADTQ+VA+ V   LE + L     PSV+TAATL K LCY++++  +A I+  GWDP +G S+Y IP GGA + Q +A+ GSGS YI GYCD H+ +                                  +S+EEC+   R+A+ LA+ARD +SGGV+R  ++  +GVER +I
Sbjct:   39 SMGTSIMAVEFDGGVVVAADSRTSTGQYVSNRVSDKLTHVHDRILCCRSGSAADTQYVADVVKFYLELHCLELSERPSVKTAATLFKQLCYENKNYLTAGIIVGGWDPVEGGSVYSIPLGGACVRQPFAIGGSGSTYIYGYCDAHYKK---------------------------------GMSKEECLAFCRNALSLAMARDGSSGGVIRSAVITESGVEREMI 230          
BLAST of mRNA_P-wetherbeei_contig2061.1.4 vs. uniprot
Match: A0A444USC0_ACIRT (Proteasome subunit beta n=1 Tax=Acipenser ruthenus TaxID=7906 RepID=A0A444USC0_ACIRT)

HSP 1 Score: 196 bits (497), Expect = 9.360e-58
Identity = 99/237 (41.77%), Postives = 144/237 (60.76%), Query Frame = 2
Query:  125 AARGVSMGTTLVAAKFDGGVVLGADSRTSSGAYVAHRFAEKMDQVHRSIVLCRSGSAADTQFVAETVAVRLEGYELTCDRAPSVRTAATLVKNLCYQHRDTFSASIVCAGWDPRKGASIYIIPPGGALLEQEYALSGSGSAYITGYCDEHFDRRSGAGSNDXXXXXXXXXXXXXXXXXXXXXXXSSALSREECIERVRHAVELAIARDTASGGVVRLCIVDRNGVERRVIVPRDWPS 835
            A + VS GTT++A +FDGGVV+GADSRT++GAY+A+R  +K+ Q+H  I  CRSGSAADTQ +A+ V  +L  + +  D AP V+TAA L K +CY++R+   A I+ AGWD R+G  +Y +P GG ++ Q +++ GSGS+YI G+ D  + R                                  +S+EEC++   +A+ LA+ RD +SGGVVRL  +  +GVERRVI+    P 
Sbjct:   22 ARQEVSTGTTIMAVEFDGGVVMGADSRTTTGAYIANRVTDKLTQIHDQIFCCRSGSAADTQAIADAVTYQLGFHSIELDEAPLVQTAANLFKEMCYKYREELMAGIIVAGWDKRRGGQVYTVPMGGMMVRQPFSIGGSGSSYIYGFVDSSYKR---------------------------------GMSKEECLQFTANALSLAMERDGSSGGVVRLAAISESGVERRVILGNQLPK 225          
BLAST of mRNA_P-wetherbeei_contig2061.1.4 vs. uniprot
Match: A0A1C7N0K9_9FUNG (Proteasome subunit beta n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7N0K9_9FUNG)

HSP 1 Score: 194 bits (494), Expect = 1.500e-57
Identity = 101/232 (43.53%), Postives = 146/232 (62.93%), Query Frame = 2
Query:  137 VSMGTTLVAAKFDGGVVLGADSRTSSGAYVAHRFAEKMDQVHRSIVLCRSGSAADTQFVAETVAVRLEGYELTCDRAPSVRTAATLVKNLCYQHRDTFSASIVCAGWDPRKGASIYIIPPGGALLEQEYALSGSGSAYITGYCDEHFDRRSGAGSNDXXXXXXXXXXXXXXXXXXXXXXXSSALSREECIERVRHAVELAIARDTASGGVVRLCIVDRNGVERRVIVPRDWP 832
            V++GT+++A  F  GV+LGADSRT++GAY+A+R  +K+ +VH +I  CRSGSAADTQ VA+ V   L+ Y  + + APSVRTAA L + LCYQ++D  SA ++ AGWD ++G  +Y IP GG+L +Q +A+ GSGS YI GYCD ++                                    +SREEC+E V++++ LA++RD +SGGV+RL ++ R GVER  I   + P
Sbjct:    8 VNLGTSIMAVAFKDGVILGADSRTTTGAYIANRVTDKLTKVHDTIYCCRSGSAADTQAVADIVHYYLQMYTASENEAPSVRTAAALFQELCYQNKDNLSAGVIVAGWDKKEGPCVYNIPLGGSLHKQPFAIGGSGSTYIYGYCDAYY---------------------------------KDDMSREECLEFVKNSLALAMSRDGSSGGVIRLAVITREGVERLFIPGNELP 206          
BLAST of mRNA_P-wetherbeei_contig2061.1.4 vs. uniprot
Match: M2WR55_GALSU (Proteasome subunit beta n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WR55_GALSU)

HSP 1 Score: 195 bits (495), Expect = 1.760e-57
Identity = 98/230 (42.61%), Postives = 140/230 (60.87%), Query Frame = 2
Query:  143 MGTTLVAAKFDGGVVLGADSRTSSGAYVAHRFAEKMDQVHRSIVLCRSGSAADTQFVAETVAVRLEGYELTCDRAPSVRTAATLVKNLCYQHRDTFSASIVCAGWDPRKGASIYIIPPGGALLEQEYALSGSGSAYITGYCDEHFDRRSGAGSNDXXXXXXXXXXXXXXXXXXXXXXXSSALSREECIERVRHAVELAIARDTASGGVVRLCIVDRNGVERRVIVPRDWP 832
            +GTT++A +FDGGVVLGADSRT++GAY+A+R ++K+  +   I  CRSGSAADTQ +A+ V   L  ++L  D  P V+TAA++ + LCY ++D   A I+CAGWDP  G  +Y IP GG ++ Q Y++ GSGS YI G+CD HF +                                  +SRE+CI+  + AV LA+ARD +SGGV+RL ++++ GV R +I     P
Sbjct:   26 LGTTIMAVEFDGGVVLGADSRTTTGAYIANRVSDKITPLSERIYCCRSGSAADTQAIADYVRYYLSIHQLDLDDLPCVKTAASICRELCYSNKDRLLAGIICAGWDPLYGGQVYTIPLGGTMIRQPYSIGGSGSTYIYGFCDAHFQK---------------------------------GMSREQCIDFTKKAVALAMARDGSSGGVIRLVVIEKQGVWREMIAGNQLP 222          
BLAST of mRNA_P-wetherbeei_contig2061.1.4 vs. uniprot
Match: A0A6J0J7X7_9PASS (Proteasome subunit beta n=77 Tax=Neognathae TaxID=8825 RepID=A0A6J0J7X7_9PASS)

HSP 1 Score: 194 bits (494), Expect = 2.980e-57
Identity = 105/238 (44.12%), Postives = 140/238 (58.82%), Query Frame = 2
Query:  119 DNAARGVSMGTTLVAAKFDGGVVLGADSRTSSGAYVAHRFAEKMDQVHRSIVLCRSGSAADTQFVAETVAVRLEGYELTCDRAPSVRTAATLVKNLCYQHRDTFSASIVCAGWDPRKGASIYIIPPGGALLEQEYALSGSGSAYITGYCDEHFDRRSGAGSNDXXXXXXXXXXXXXXXXXXXXXXXSSALSREECIERVRHAVELAIARDTASGGVVRLCIVDRNGVERRVIVPRDWP 832
            D  A  VS GTT++A +FDGGVV+GADSRT++G+YVA+R  +K+  VH  I  CRSGSAADTQ VA+ VA +L  + +  +  P VRTAA L +  CY++R+  SA I+ AGWDPR+G  +Y++P GG LL Q +A+ GSGS+YI GY D  F                                    +SR +C E V  A+ LA+ RD +SGGV+RL  +   GVER V+   D P
Sbjct:   21 DWTAEPVSTGTTIMAVEFDGGVVIGADSRTTTGSYVANRVTDKLTPVHDRIFCCRSGSAADTQAVADAVAYQLAFHSVELEEPPRVRTAARLFQQSCYRYREELSAGIIVAGWDPRRGGQVYVVPLGGLLLRQPFAVGGSGSSYIYGYLDATFQ---------------------------------PGMSRSQCQEFVARALALAMVRDGSSGGVIRLAAITEEGVERTVLAGPDLP 225          
BLAST of mRNA_P-wetherbeei_contig2061.1.4 vs. uniprot
Match: A0A8H7UIW0_MORIS (Proteasome subunit beta n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7UIW0_MORIS)

HSP 1 Score: 192 bits (489), Expect = 8.460e-57
Identity = 99/230 (43.04%), Postives = 144/230 (62.61%), Query Frame = 2
Query:  137 VSMGTTLVAAKFDGGVVLGADSRTSSGAYVAHRFAEKMDQVHRSIVLCRSGSAADTQFVAETVAVRLEGYELTCDRAPSVRTAATLVKNLCYQHRDTFSASIVCAGWDPRKGASIYIIPPGGALLEQEYALSGSGSAYITGYCDEHFDRRSGAGSNDXXXXXXXXXXXXXXXXXXXXXXXSSALSREECIERVRHAVELAIARDTASGGVVRLCIVDRNGVERRVIVPRD 826
            V++GT+++A  F  GV++GADSRT++G+Y+A+R  +K+ +VH  I  CRSGSAADTQ VA+ V   L+ Y +  D  PSV TAATL + +CYQ++D  SA I+ AGWD +KG ++Y IP GG+L +Q +A+ GSGS YI GYCD  +                                    +SREEC++ V++++ LA+ARD +SGGV+R+ ++   GVER + VP D
Sbjct:    8 VNLGTSIMAVAFKDGVIVGADSRTTTGSYIANRVTDKLTKVHDLIYCCRSGSAADTQAVADIVQYYLQMYSVQQDEPPSVHTAATLFQEMCYQNKDQLSAGIIVAGWDKKKGGTVYNIPLGGSLHQQPFAIGGSGSTYIYGYCDSQY---------------------------------KDGMSREECVDFVKNSLALAMARDGSSGGVIRMAVITEKGVER-LFVPGD 203          
BLAST of mRNA_P-wetherbeei_contig2061.1.4 vs. uniprot
Match: A0A0G4J808_PLABS (Proteasome subunit beta n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J808_PLABS)

HSP 1 Score: 192 bits (488), Expect = 1.850e-56
Identity = 99/228 (43.42%), Postives = 141/228 (61.84%), Query Frame = 2
Query:  143 MGTTLVAAKFDGGVVLGADSRTSSGAYVAHRFAEKMDQVHRSIVLCRSGSAADTQFVAETVAVRLEGYELTCDRAPSVRTAATLVKNLCYQHRDTFSASIVCAGWDPRKGASIYIIPPGGALLEQEYALSGSGSAYITGYCDEHFDRRSGAGSNDXXXXXXXXXXXXXXXXXXXXXXXSSALSREECIERVRHAVELAIARDTASGGVVRLCIVDRNGVERRVIVPRD 826
            +GTT++A  FDGGVV+GADSRTS+GAYVA+R ++K+ ++H  I  CRSGSAADTQ +A+ V   L+ + +     P V  AA L + LCY ++D+  A ++  GWD R G S+Y +  GG++++Q+Y++ GSGS+YI GYCD HF +                                  +++EEC + VRHA+  AIARD +SGGV+RL  +D NG ER V+VP D
Sbjct:   22 LGTTIMAVAFDGGVVVGADSRTSTGAYVANRVSDKLTKLHDRIYCCRSGSAADTQAIADIVKYYLDVHSIEIGDLPEVSVAAHLARRLCYDYKDSLLAGLIIGGWDKRNGGSVYTVTLGGSVVKQDYSIGGSGSSYIYGYCDAHFRK---------------------------------GMTKEECQKFVRHAISHAIARDGSSGGVIRLATIDANGAER-VMVPGD 215          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2061.1.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEH7_ECTSI5.380e-6347.41Proteasome endopeptidase complex n=2 Tax=Ectocarpu... [more]
A0A2G5B312_COERN3.470e-5946.67Proteasome subunit beta n=1 Tax=Coemansia reversa ... [more]
A0A1Y1WB45_9FUNG2.760e-5845.22Proteasome subunit beta n=1 Tax=Linderina pennispo... [more]
A0A7S4KMV0_9EUKA8.750e-5844.89Proteasome subunit beta n=1 Tax=Paramoeba aestuari... [more]
A0A444USC0_ACIRT9.360e-5841.77Proteasome subunit beta n=1 Tax=Acipenser ruthenus... [more]
A0A1C7N0K9_9FUNG1.500e-5743.53Proteasome subunit beta n=1 Tax=Choanephora cucurb... [more]
M2WR55_GALSU1.760e-5742.61Proteasome subunit beta n=1 Tax=Galdieria sulphura... [more]
A0A6J0J7X7_9PASS2.980e-5744.12Proteasome subunit beta n=77 Tax=Neognathae TaxID=... [more]
A0A8H7UIW0_MORIS8.460e-5743.04Proteasome subunit beta n=1 Tax=Mortierella isabel... [more]
A0A0G4J808_PLABS1.850e-5643.42Proteasome subunit beta n=1 Tax=Plasmodiophora bra... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig2061contigP-wetherbeei_contig2061:177..1630 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LEH7
Preferred namePSMB6
PFAMsProteasome
Model size1042
Max annot lvl2759|Eukaryota
KEGG koko:K02738,ko:K02741,ko:K11507
KEGG Pathwayko03050,map03050
KEGG ModuleM00337,M00340
Hectar predicted targeting categorysignal peptide
GOsGO:0000502,GO:0001889,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003674,GO:0003824,GO:0004175,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0005839,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0007088,GO:0007275,GO:0007346,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009605,GO:0009607,GO:0009615,GO:0009617,GO:0009628,GO:0009896,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0010499,GO:0010564,GO:0010638,GO:0010965,GO:0012505,GO:0014070,GO:0014889,GO:0016020,GO:0016579,GO:0016787,GO:0019222,GO:0019538,GO:0019774,GO:0019882,GO:0019941,GO:0030071,GO:0030162,GO:0030163,GO:0031331,GO:0031597,GO:0031974,GO:0031981,GO:0031984,GO:0032270,GO:0032436,GO:0032501,GO:0032502,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034097,GO:0034515,GO:0036211,GO:0042175,GO:0042221,GO:0042493,GO:0043161,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043279,GO:0043412,GO:0043500,GO:0043632,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048536,GO:0048538,GO:0048731,GO:0048732,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051246,GO:0051247,GO:0051336,GO:0051602,GO:0051603,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0052547,GO:0052548,GO:0060255,GO:0061008,GO:0062033,GO:0065007,GO:0065009,GO:0070011,GO:0070013,GO:0070555,GO:0070628,GO:0070646,GO:0070647,GO:0070887,GO:0071214,GO:0071257,GO:0071310,GO:0071345,GO:0071347,GO:0071704,GO:0080090,GO:0090068,GO:0098586,GO:0098827,GO:0104004,GO:0140096,GO:1901423,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:1990111,GO:2000116,GO:2001252
Exons3
Evalue7.48e-65
EggNOG OGsKOG0174@1|root,KOG0174@2759|Eukaryota
Ec32 ortholog descriptionNucleophile aminohydrolases, N-terminal
Ec32 orthologEc-21_004640.1
EC3.4.25.1
DescriptionProteasome subunit beta
Cds size813
COG categoryO
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03036,ko03051
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186204.422099-UTR-P-wetherbeei_contig2061:176..3651683186204.422099-UTR-P-wetherbeei_contig2061:176..365Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig2061 177..365 -
1683186204.4707787-UTR-P-wetherbeei_contig2061:1590..16301683186204.4707787-UTR-P-wetherbeei_contig2061:1590..1630Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig2061 1591..1630 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186204.4350333-CDS-P-wetherbeei_contig2061:365..7851683186204.4350333-CDS-P-wetherbeei_contig2061:365..785Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2061 366..785 -
1683186204.4480884-CDS-P-wetherbeei_contig2061:1049..11831683186204.4480884-CDS-P-wetherbeei_contig2061:1049..1183Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2061 1050..1183 -
1683186204.4605932-CDS-P-wetherbeei_contig2061:1331..15901683186204.4605932-CDS-P-wetherbeei_contig2061:1331..1590Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2061 1332..1590 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig2061.1.4prot_P-wetherbeei_contig2061.1.4Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig2061 366..1590 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig2061.1.4

>prot_P-wetherbeei_contig2061.1.4 ID=prot_P-wetherbeei_contig2061.1.4|Name=mRNA_P-wetherbeei_contig2061.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=271bp
MCGIISLLTAFIFLCAPALAHFWDAHDNAARGVSMGTTLVAAKFDGGVVL
GADSRTSSGAYVAHRFAEKMDQVHRSIVLCRSGSAADTQFVAETVAVRLE
GYELTCDRAPSVRTAATLVKNLCYQHRDTFSASIVCAGWDPRKGASIYII
PPGGALLEQEYALSGSGSAYITGYCDEHFDRRSGAGSNDGGGTGSGDGRS
RGDSGSSGGDGGSSALSREECIERVRHAVELAIARDTASGGVVRLCIVDR
NGVERRVIVPRDWPSTLKYK*
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mRNA from alignment at P-wetherbeei_contig2061:177..1630-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig2061.1.4 ID=mRNA_P-wetherbeei_contig2061.1.4|Name=mRNA_P-wetherbeei_contig2061.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1454bp|location=Sequence derived from alignment at P-wetherbeei_contig2061:177..1630- (Phaeothamnion wetherbeei SAG_119_79)
GTACGAAATTACTCTTATTCGCCACACCCCGCTACACAACATGTGTGGCA TCATCTCCCTCCTGACAGCATTCATCTTCTTGTGCGCCCCTGCCTTGGCG CACTTCTGGGACGCGCATGACAACGCTGCGCGGGGAGTATCCATGGGCAC GACCCTCGTCGCTGCCAAGTTTGATGGCGGCGTCGTCCTTGGGGCGGACT CGAGAACCAGTTCAGGAGCTTACGTGGCGCATCGATTCGCGGAGAAAATG GATCAAGTGCATCGATCCATCGTCCTCTGCCGTTCTGGCAGCGCCGCAGG TGCGTGTGCTATCTGTTCCGAGCAGAGAAGACTCCAGCAGCGTGGGATTT GCATTGCGTTTGTCTTACCGTTTTTATTTCGTGGTCCTGTGATTCTCTTT CTCCGTTTGCCTCTTTTCATTCTCTGCCAACTTCGAACCGGTTTCAGACA CCCAATTCGTCGCGGAGACCGTGGCAGTGCGCCTGGAGGGGTATGAGCTC ACTTGCGATCGCGCGCCTTCAGTCCGAACAGCTGCAACTCTCGTCAAGAA CCTCTGCTATCAACATCGAGACACATTTTCGGTGAGGCTGCTCTTTGGCG CGGCCCACTGTCGGACTACAGAATTGCCGCGCCTTCACAGATTGTGTACT TTACCCTTCTTGGGATGCCTCCCTTGCAATCCCGCTTTTTCACGGCTTGG ATGAGTTGGCTCTTCATTTCTGCCTATTTCGAAACCCAGTAGAATTCCAC CGTGCTTGGTGGAACGGACACCTTTGGATGCTACACTGACAACTACCGCA ATCGTTTCCGTTCGCTTCTGTTCGGTTTCGGTTTGGGTTTGCCAGGCCAG CATCGTCTGCGCAGGCTGGGACCCGCGGAAAGGCGCCAGCATCTACATCA TCCCGCCGGGCGGCGCGCTGCTGGAGCAGGAGTACGCGCTGTCAGGCTCC GGCTCGGCCTACATCACCGGCTACTGCGACGAGCACTTTGACAGGAGAAG CGGCGCCGGCAGCAATGACGGCGGCGGCACGGGCTCCGGCGATGGCAGAA GCCGTGGCGACAGCGGAAGCAGTGGCGGCGACGGCGGCAGCAGCGCGCTG TCGCGGGAGGAGTGCATCGAGCGCGTGCGTCACGCCGTGGAGTTGGCGAT CGCGCGGGACACTGCGTCGGGTGGCGTGGTGCGTCTGTGCATCGTCGACC GGAACGGCGTCGAGAGGCGGGTGATCGTGCCGCGGGACTGGCCGAGTACA TTAAAGTACAAATGAACCCGTTTTCCTTTCAACACCGTTATTCACCCCGC GGTTCAAACCACGGACGTGTTCCAGTCTCTCGCCGGTACTATCCTTTTCG CTTCGAAAGATGTCTGTGGAGAGGAGCCGGAGCTCGTCGGTGTAGTGCAA CGAGGTACGCTTGATGTTAATGCTGCCTCAGATGTGCCATGCTGTAAGAG AAGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig2061:177..1630-

>mRNA_P-wetherbeei_contig2061.1.4 ID=mRNA_P-wetherbeei_contig2061.1.4|Name=mRNA_P-wetherbeei_contig2061.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=813bp|location=Sequence derived from alignment at P-wetherbeei_contig2061:177..1630- (Phaeothamnion wetherbeei SAG_119_79)
ATGTGTGGCATCATCTCCCTCCTGACAGCATTCATCTTCTTGTGCGCCCC
TGCCTTGGCGCACTTCTGGGACGCGCATGACAACGCTGCGCGGGGAGTAT
CCATGGGCACGACCCTCGTCGCTGCCAAGTTTGATGGCGGCGTCGTCCTT
GGGGCGGACTCGAGAACCAGTTCAGGAGCTTACGTGGCGCATCGATTCGC
GGAGAAAATGGATCAAGTGCATCGATCCATCGTCCTCTGCCGTTCTGGCA
GCGCCGCAGACACCCAATTCGTCGCGGAGACCGTGGCAGTGCGCCTGGAG
GGGTATGAGCTCACTTGCGATCGCGCGCCTTCAGTCCGAACAGCTGCAAC
TCTCGTCAAGAACCTCTGCTATCAACATCGAGACACATTTTCGGCCAGCA
TCGTCTGCGCAGGCTGGGACCCGCGGAAAGGCGCCAGCATCTACATCATC
CCGCCGGGCGGCGCGCTGCTGGAGCAGGAGTACGCGCTGTCAGGCTCCGG
CTCGGCCTACATCACCGGCTACTGCGACGAGCACTTTGACAGGAGAAGCG
GCGCCGGCAGCAATGACGGCGGCGGCACGGGCTCCGGCGATGGCAGAAGC
CGTGGCGACAGCGGAAGCAGTGGCGGCGACGGCGGCAGCAGCGCGCTGTC
GCGGGAGGAGTGCATCGAGCGCGTGCGTCACGCCGTGGAGTTGGCGATCG
CGCGGGACACTGCGTCGGGTGGCGTGGTGCGTCTGTGCATCGTCGACCGG
AACGGCGTCGAGAGGCGGGTGATCGTGCCGCGGGACTGGCCGAGTACATT
AAAGTACAAATGA
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