mRNA_P-wetherbeei_contig20556.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20556.1.1 vs. uniprot
Match: D7FGV9_ECTSI (SGF29 C-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV9_ECTSI) HSP 1 Score: 94.4 bits (233), Expect = 4.010e-20 Identity = 48/111 (43.24%), Postives = 70/111 (63.06%), Query Frame = 1
Query: 22 WILARALRYSAESGEWEVKDEDEADRKARHIVHERYVRRLEPTAQGLTRGDPVLAVYPDTTVFYLGEVYKQIPKATNSDMPEIFIKFEDDNTEGGTTPARKLPALYVIPLP 354
WILAR ++Y E+ ++E+KD+D+ + V RLE + +G+ +G+ VLAV+PDTT FYLG +++ +PK I +KF DD + G TP R LPA YV+PLP
Sbjct: 388 WILARVIKYVPETHQYELKDDDDKEGIGILTAPRSLVIRLEDSTKGVQKGERVLAVFPDTTSFYLGTIHR-VPKPAPGAERRIEVKFNDDADDTGRTPGRPLPARYVVPLP 497
BLAST of mRNA_P-wetherbeei_contig20556.1.1 vs. uniprot
Match: A0A6H5L6S1_9PHAE (SGF29 C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6S1_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 5.140e-20 Identity = 47/111 (42.34%), Postives = 69/111 (62.16%), Query Frame = 1
Query: 22 WILARALRYSAESGEWEVKDEDEADRKARHIVHERYVRRLEPTAQGLTRGDPVLAVYPDTTVFYLGEVYKQIPKATNSDMPEIFIKFEDDNTEGGTTPARKLPALYVIPLP 354
WILAR ++Y ++ +E+KD+D+ + V RLE + +G+ +G+ VLAV+PDTT FYLG +++ +PK I +KF DD + G TP R LPA YV+PLP
Sbjct: 116 WILARVIKYVPDTHHYELKDDDDKEGIGILTAPRSLVIRLEDSTKGVQKGERVLAVFPDTTSFYLGTIHR-VPKPAPGAERRIEVKFNDDADDTGRTPGRSLPARYVVPLP 225
BLAST of mRNA_P-wetherbeei_contig20556.1.1 vs. uniprot
Match: A0A7S2D9R3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D9R3_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 4.810e-14 Identity = 41/113 (36.28%), Postives = 67/113 (59.29%), Query Frame = 1
Query: 13 NEGWILARALRYSAESGEWEVKDEDEADRKARHIVHERYVRRLEPTAQGLTRGDPVLAVYPDTTVFYLGEVYKQIPKATNS--DMPEIFIKFEDDNTEGGTTPARKLPALYVI 345
N WILA +Y +EV+DED+ + + E + RL+ + + +++G VLAV+PDTT FY + K + +++ + P+I+++FEDD E G TP R++ A YVI
Sbjct: 150 NGSWILATVKKYYPSEDLFEVQDEDDDSKLTKLPPSE--LMRLDDSVEHMSKGQAVLAVFPDTTSFYRARISKPVKRSSTNYRTSPDIYVQFEDDEDETGRTPHRRVIARYVI 260
BLAST of mRNA_P-wetherbeei_contig20556.1.1 vs. uniprot
Match: A0A7S3XKW5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKW5_HETAK) HSP 1 Score: 71.6 bits (174), Expect = 3.490e-12 Identity = 44/114 (38.60%), Postives = 67/114 (58.77%), Query Frame = 1
Query: 13 NEGWILARALRYSAESGEWEVKDEDEADRKARHIVHERYVRRLEPTAQGLTRGDPVLAVYPDTTVFYLGEVYKQIPKATNSDMPEIFIKFEDDNTEGGTTPARKLPALYVIPLP 354
N WILAR + ++ + V+DED+ K + H R V RL + ++GD VLA++P+TT FY G V+K P T++ + I+FEDD G TP+R +P+ +V+ LP
Sbjct: 147 NGSWILARVVEFNVAKQVYTVQDEDDVT-KVMDLDHNR-VLRLNDGSTHFSKGDAVLAMFPETTSFYRGLVHK--PANTDN---MLQIRFEDDEDGQGRTPSRHIPSRFVLRLP 253
BLAST of mRNA_P-wetherbeei_contig20556.1.1 vs. uniprot
Match: A0A7S2W6R2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6R2_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 1.870e-10 Identity = 41/113 (36.28%), Postives = 62/113 (54.87%), Query Frame = 1
Query: 16 EGWILARALRYSAESGEWEVKDEDEADRKARHIVHERYVRRLEPTAQGLTRGDPVLAVYPDTTVFY---LGEVYKQIPKATNSDMPEIFIKFEDDNTEGGTTPARKLPALYVI 345
E WIL R Y +G + V DEDEA++ + V + ++ RLE L++G+ VLAVYPDTT FY + V +++ A D ++F DD + G P R + L++I
Sbjct: 145 EEWILGRVWEYDIAAGVYTVGDEDEAEKTFQ--VSDAHIIRLEQLK--LSKGEEVLAVYPDTTSFYPAIVTSVSRKMGGALAGDSSFCTVQFHDDEDDSGINPDRSVKILHII 253
BLAST of mRNA_P-wetherbeei_contig20556.1.1 vs. uniprot
Match: A0A0P1ARG5_PLAHL (Histone acetyltransferase SAGA associated factor SGF29 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ARG5_PLAHL) HSP 1 Score: 65.1 bits (157), Expect = 4.600e-10 Identity = 43/129 (33.33%), Postives = 68/129 (52.71%), Query Frame = 1
Query: 10 SNEGWILARALRYSAESGEWEVKDEDEADR-------KARHIVHERYVRRLEPTAQGLTRGD--------PVLAVYPDTTVFYLGEVYKQIPKATNSDMPEIFIKFEDDNTEGGTTPARKLPALYVIPL 351
S+E WI+AR ++Y+A+S +EV+D D D K +IV ++V +E L+ G+ V+A+YP+TT F+ + PK P + +KF++D E G P RK+P +V PL
Sbjct: 163 SHELWIMARVVKYNADSRTYEVEDVDCGDEDGEDDAVKRHYIVAWQHV--VELPGDSLSEGEWIQYSLNERVMAMYPNTTSFFRSTIRVPNPKGA----PYVILKFDEDEDEHGLVPDRKVPFRFVAPL 285
BLAST of mRNA_P-wetherbeei_contig20556.1.1 vs. uniprot
Match: W2KIU3_PHYPR (SGF29 C-terminal domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2KIU3_PHYPR) HSP 1 Score: 64.7 bits (156), Expect = 7.040e-10 Identity = 41/128 (32.03%), Postives = 67/128 (52.34%), Query Frame = 1
Query: 10 SNEGWILARALRYSAESGEWEVKD------EDEADRKARHIVHERYVRRLEPTAQGLTRG--------DPVLAVYPDTTVFYLGEVYKQIPKATNSDMPEIFIKFEDDNTEGGTTPARKLPALYVIPL 351
S+E WI+AR ++++A+S +EV+D ED+ D RH + + + +E L G + V+A+YP+TT F+ + PK P + +KF++D E G P RK+P +V PL
Sbjct: 181 SHELWIMARVVKFNADSNTYEVEDVDSGDDEDDTDAPRRHYIVP-WQQVVELPGDSLPEGTWIQYAVNERVMAMYPNTTSFFRSTIRVPNPKGA----PYVILKFDEDEDEHGFVPDRKVPFRFVAPL 303
BLAST of mRNA_P-wetherbeei_contig20556.1.1 vs. uniprot
Match: A0A225WCB5_9STRA (SGF29 C-terminal domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WCB5_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 2.240e-9 Identity = 41/126 (32.54%), Postives = 65/126 (51.59%), Query Frame = 1
Query: 10 SNEGWILARALRYSAESGEWEVKD----EDEADRKARHIVHERYVRRLEPTAQGLTRGD--------PVLAVYPDTTVFYLGEVYKQIPKATNSDMPEIFIKFEDDNTEGGTTPARKLPALYVIPL 351
S+E WI+AR ++++A+S +EV+D EDE D R + + +E L G+ V+A+YP+TT F+ + PK P + +KF++D E G P RK+P +V PL
Sbjct: 160 SHELWIMARIVKFNADSNTYEVEDVDSGEDEEDDTPRRHYIVPWQQVVELPGDSLAEGEWIHYALNERVMAMYPNTTSFFRSTIRVPNPKGA----PYVILKFDEDEDEHGFIPDRKVPFRFVAPL 281
BLAST of mRNA_P-wetherbeei_contig20556.1.1 vs. uniprot
Match: D0MYS2_PHYIT (SGF29 C-terminal domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MYS2_PHYIT) HSP 1 Score: 63.2 bits (152), Expect = 2.470e-9 Identity = 40/129 (31.01%), Postives = 67/129 (51.94%), Query Frame = 1
Query: 10 SNEGWILARALRYSAESGEWEVKD-------EDEADRKARHIVHERYVRRLEPTAQGLTRGD--------PVLAVYPDTTVFYLGEVYKQIPKATNSDMPEIFIKFEDDNTEGGTTPARKLPALYVIPL 351
S+E WI+AR ++++A++ +EV+D ED+ D RH + + + +E L G+ V+A+YP+TT F+ + PK P + +KF++D E G P RK+P +V PL
Sbjct: 168 SHELWIMARVVKFNADTNTYEVEDVDAGDDDEDDVDAPRRHYIVP-WQQVVELPGDSLPEGEWIQYAVNERVMAMYPNTTSFFRSTIRVPNPKGA----PYVILKFDEDEDEHGFVPDRKVPFRFVAPL 291
BLAST of mRNA_P-wetherbeei_contig20556.1.1 vs. uniprot
Match: A0A3M6VT85_9STRA (SGF29 C-terminal domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VT85_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 4.390e-9 Identity = 41/129 (31.78%), Postives = 67/129 (51.94%), Query Frame = 1
Query: 10 SNEGWILARALRYSAESGEWEVKDEDEADR-------KARHIVHERYVRRLEPTAQGLTRGD--------PVLAVYPDTTVFYLGEVYKQIPKATNSDMPEIFIKFEDDNTEGGTTPARKLPALYVIPL 351
S+E WI+AR ++++A+S +EV+D D D + +IV + V +E L +G+ V+A+YP+TT F+ + PK P + +KF++D E G P RK+P +V PL
Sbjct: 164 SHELWIMARVVKFNADSSTYEVEDVDSGDDXXXXDAPRRHYIVPWQQV--VELPGDSLPKGEWIHYAVNERVMAMYPNTTSFFRSTIRVPNPKGA----PYVILKFDEDEDEQGFVPDRKVPFRFVAPL 286 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20556.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20556.1.1 >prot_P-wetherbeei_contig20556.1.1 ID=prot_P-wetherbeei_contig20556.1.1|Name=mRNA_P-wetherbeei_contig20556.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=118bp MPGSNEGWILARALRYSAESGEWEVKDEDEADRKARHIVHERYVRRLEPTback to top mRNA from alignment at P-wetherbeei_contig20556:234..977+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20556.1.1 ID=mRNA_P-wetherbeei_contig20556.1.1|Name=mRNA_P-wetherbeei_contig20556.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=744bp|location=Sequence derived from alignment at P-wetherbeei_contig20556:234..977+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20556:234..977+ >mRNA_P-wetherbeei_contig20556.1.1 ID=mRNA_P-wetherbeei_contig20556.1.1|Name=mRNA_P-wetherbeei_contig20556.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=354bp|location=Sequence derived from alignment at P-wetherbeei_contig20556:234..977+ (Phaeothamnion wetherbeei SAG_119_79)back to top |